>SYC_YEAST (P53852) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 767

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 342 YNNLAVANYFLPPQDSNKGTAPPNCSPSTYDGARKNHGQ 226
           YN+L  +     PQ  N+G    +C P+ YD +   H +
Sbjct: 39  YNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHAR 77

>USF1_XENBO (Q07957) Upstream stimulatory factor 1 (USF) (SPF1) (B1 factor)|
          Length = 307

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -1

Query: 474 QQNGLVGTADAMPGYSLSSL-FRSIWSDPCLEFAFRTLTGDIPVPYNNLAVANYFLPPQD 298
           Q+ G V T +     +++S+   + +SDP +++ FRT  G   V Y  + VA   L  Q 
Sbjct: 18  QEEGAVATGEDPTSVAIASIQSAATFSDPNVKYVFRTENGGAQVMYRVIQVAEGQLDGQT 77

Query: 297 SNKG 286
              G
Sbjct: 78  EGTG 81

>DICH_DROME (Q24533) SOX-domain protein dichaete (Protein fish-hook)|
          Length = 382

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/111 (22%), Positives = 47/111 (42%)
 Frame = -1

Query: 531 AXXACSLTDVGRQDAHAPPQQNGLVGTADAMPGYSLSSLFRSIWSDPCLEFAFRTLTGDI 352
           A  A ++ + G+Q   APPQ          +P  SLSS +  I+S          ++   
Sbjct: 293 AAAAAAVNNQGQQQGQAPPQ----------LPPTSLSSFYSGIYSG---------ISAPS 333

Query: 351 PVPYNNLAVANYFLPPQDSNKGTAPPNCSPSTYDGARKNHGQVDLVRQPMP 199
               ++   A  +     S+ G++P   +P+  DG+  +      +R+P+P
Sbjct: 334 LYAAHSANAAGLYPSSSTSSPGSSPGTITPNGMDGSMDS-----ALRRPVP 379

>GSH1_YEAST (P32477) Glutamate--cysteine ligase (EC 6.3.2.2)|
           (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS)
          Length = 678

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
 Frame = -1

Query: 351 PVPYNNLAVANYFLPPQDSNKGTAPPNCSPSTYDGARKNHGQVDLVRQPM------PRPS 190
           P  + N A  + FLP +  N+    PN + S     R   G+   +  PM      P   
Sbjct: 173 PWNHKNAASRSLFLPDEVINRHVRFPNLTAS----IRTRRGEKVCMNVPMYKDIATPETD 228

Query: 189 DRLYSSGWFPPQ 154
           D +Y   WF P+
Sbjct: 229 DSIYDRDWFLPE 240

>SLA2_SCHPO (Q9P6L5) Endocytosis protein end4 (SLA2 protein homolog)|
          Length = 1092

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 483 APPQQNGLVGTADAMPGYSLSSLFRSIWSDPCLE 382
           +PP +     T+D  P YS     +  WSDP L+
Sbjct: 297 SPPVEMNFPDTSDITPAYSEPEPIQDFWSDPTLD 330

>PSTA2_MYCTU (P0A626) Phosphate transport system permease protein pstA-2|
          Length = 301

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 262 RRTIGWRRPFVRVLWWKEVVCNS*VVV 342
           RR++ +RR  V  LWW   VC   VV+
Sbjct: 19  RRSVAYRRKIVDALWWAACVCCLAVVI 45

>PSTA2_MYCBO (P0A627) Phosphate transport system permease protein pstA-2|
          Length = 301

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 262 RRTIGWRRPFVRVLWWKEVVCNS*VVV 342
           RR++ +RR  V  LWW   VC   VV+
Sbjct: 19  RRSVAYRRKIVDALWWAACVCCLAVVI 45

>CNTN1_CHICK (P14781) Contactin-1 precursor (Neural cell recognition molecule|
           F11)
          Length = 1010

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = -1

Query: 393 PCLEFAFRTLTGDIPVPYNNLAVANYFLPPQDSNKGTAPPNCSPSTYDGARKNHGQVDLV 214
           P +E+ FR +        N L      +P Q      APPN +PS   G   ++ ++ + 
Sbjct: 664 PWMEYEFRIIAT------NTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTIT 717

Query: 213 RQPMPR 196
             P+ R
Sbjct: 718 WMPLSR 723

>GLAS_DROME (P13360) Protein glass|
          Length = 604

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 351 PVPYNNLAVANYFLPPQDSNKGTAPPNCSPSTYDGA 244
           P P  N ++A Y+ P    N+G  PP+ SP++Y  A
Sbjct: 370 PSPPANSSLAGYY-PTGVGNQGYTPPHKSPTSYQAA 404


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,178,864
Number of Sequences: 219361
Number of extensions: 1785464
Number of successful extensions: 4085
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4085
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)