ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23g23 |
|---|---|
| Clone Library Name | barley_pub |
>ACSL1_CAVPO (Q9JID6) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase) Length = 698 Score = 123 bits (309), Expect = 3e-28 Identities = 55/144 (38%), Positives = 91/144 (63%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E +YV + ++V+G+S + Sbjct: 535 WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVFVHGESLQ 594 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + L+A+V P E+ WA G++GSF E+C+++ +K+ IL+++ + + L+ FE ++ Sbjct: 595 AFLIAIVVPDAESLASWARKRGFEGSFEELCRNKDVKKAILEDMVRIGKDSGLKSFEQVR 654 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 G+ L P F ++ L+T TMK +R Sbjct: 655 GIALHPELFSVDNGLLTPTMKAKR 678
>ACSL1_HUMAN (P33121) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (LACS 1) (Palmitoyl-CoA ligase 1) (Long-chain fatty acid CoA ligase 2) (Long-chain acyl-CoA synthetase 2) (LACS 2) (Acyl-CoA synthetase 1) (ACS1) (Pa Length = 698 Score = 122 bits (306), Expect = 7e-28 Identities = 56/144 (38%), Positives = 90/144 (62%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E +Y+ + ++V+G+S + Sbjct: 535 WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQ 594 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + L+A+V P E WA G++GSF E+C+++ +K+ IL+++ + + L+ FE +K Sbjct: 595 AFLIAIVVPDVETLCSWAQKRGFEGSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVK 654 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 G+ L P F I+ L+T TMK +R Sbjct: 655 GITLHPELFSIDNGLLTPTMKAKR 678
>ACSL5_MOUSE (Q8JZR0) Long-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 5) (LACS 5) Length = 683 Score = 120 bits (301), Expect = 3e-27 Identities = 59/149 (39%), Positives = 90/149 (60%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K++ R K IFKL+QGEY+A E +E VY + ++V+G+S + Sbjct: 520 WLHTGDIGRWLPNGTLKIVDRKKNIFKLAQGEYIAPEKIENVYSRSRPVLQVFVHGESLR 579 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S L+ VV P ++ +A G KGSF E+CK++ +KE IL++L ++ L+ FE +K Sbjct: 580 SFLIGVVVPDPDSLPSFAAKIGVKGSFEELCKNQCVKEAILEDLQKIGKEGGLKSFEQVK 639 Query: 218 GVMLDPVPFDIERDLVTATMKKRRNYMXK 132 + + P PF IE L+T T+K +R + K Sbjct: 640 SIFVHPEPFTIENGLLTPTLKAKRVELAK 668
>ACSL5_RAT (O88813) Long-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 5) (LACS 5) Length = 683 Score = 120 bits (300), Expect = 4e-27 Identities = 60/149 (40%), Positives = 90/149 (60%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E VY I ++V+G+S + Sbjct: 520 WLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIENVYSRSRPILQVFVHGESLR 579 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S L+ VV P E+ +A G KGSF E+C+++ +K+ IL++L ++ L+ FE +K Sbjct: 580 SFLIGVVVPDPESLPSFAAKIGVKGSFEELCQNQCVKKAILEDLQKVGKEGGLKSFEQVK 639 Query: 218 GVMLDPVPFDIERDLVTATMKKRRNYMXK 132 + + P PF IE L+T T+K +R + K Sbjct: 640 SIFVHPEPFSIENGLLTPTLKAKRVELAK 668
>ACSL5_HUMAN (Q9ULC5) Long-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 5) (LACS 5) Length = 683 Score = 119 bits (297), Expect = 8e-27 Identities = 60/149 (40%), Positives = 90/149 (60%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E +Y + I+V+G+S + Sbjct: 520 WLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIENIYNRSQPVLQIFVHGESLR 579 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S LV VV P + +A G KGSF E+C+++ ++E IL++L +++ L+ FE +K Sbjct: 580 SSLVGVVVPDTDVLPSFAAKLGVKGSFEELCQNQVVREAILEDLQKIGKESGLKTFEQVK 639 Query: 218 GVMLDPVPFDIERDLVTATMKKRRNYMXK 132 + L P PF IE L+T T+K +R + K Sbjct: 640 AIFLHPEPFSIENGLLTPTLKAKRGELSK 668
>ACSL1_MOUSE (P41216) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (LACS 1) Length = 699 Score = 117 bits (293), Expect = 2e-26 Identities = 55/144 (38%), Positives = 88/144 (61%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E +Y+ + ++V+G+S + Sbjct: 536 WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQ 595 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + L+AVV P E+ WA G +GSF E+C+++ + + IL +L ++ L+ FE +K Sbjct: 596 AFLIAVVVPDVESLPSWAQKRGLQGSFEELCRNKDINKAILDDLLKLGKEAGLKPFEQVK 655 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 G+ + P F I+ L+T T+K +R Sbjct: 656 GIAVHPELFSIDNGLLTPTLKAKR 679
>ACSL1_RAT (P18163) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (LACS 1) (Long-chain-fatty-acid--CoA ligase, liver isozyme) Length = 699 Score = 117 bits (292), Expect = 3e-26 Identities = 53/144 (36%), Positives = 88/144 (61%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEY+A E +E +Y+ + ++V+G+S + Sbjct: 536 WLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQ 595 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + L+A+V P E WA G++GSF E+C+++ + + IL+++ + L+ FE +K Sbjct: 596 AFLIAIVVPDVEILPSWAQKRGFQGSFEELCRNKDINKAILEDMVKLGKNAGLKPFEQVK 655 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 G+ + P F I+ L+T T+K +R Sbjct: 656 GIAVHPELFSIDNGLLTPTLKAKR 679
>ACSL6_RAT (P33124) Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 6) (LACS 6) (Long-chain-fatty-acid--CoA ligase, brain isozyme) Length = 697 Score = 114 bits (286), Expect = 2e-25 Identities = 56/144 (38%), Positives = 85/144 (59%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEYVA E +E +Y+ + I+V+GDS K Sbjct: 535 WLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLK 594 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + LV +V P E WA G +G++ E+CKS+ LK+ IL ++ +++ L FE +K Sbjct: 595 AFLVGIVVPDPEVMPCWAQKKGIEGNYQELCKSKELKKAILDDMVMLGKESGLHSFEQVK 654 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + + F ++ L+T T+K +R Sbjct: 655 AIYIHCDMFSVQNGLLTPTLKAKR 678
>ACSL6_HUMAN (Q9UKU0) Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 6) (LACS 6) Length = 697 Score = 113 bits (283), Expect = 3e-25 Identities = 53/144 (36%), Positives = 86/144 (59%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEYVA E +E +Y+ + I+V+GDS K Sbjct: 535 WLHTGDIGKWLPAGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSQPVAQIYVHGDSLK 594 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + LV +V P E WA G +G+++++C ++ LK+ IL+++ +++ L FE +K Sbjct: 595 AFLVGIVVPDPEVMPSWAQKRGIEGTYADLCTNKDLKKAILEDMVRLGKESGLHSFEQVK 654 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + + F ++ L+T T+K +R Sbjct: 655 AIHIHSDMFSVQNGLLTPTLKAKR 678
>ACSL6_MOUSE (Q91WC3) Long-chain-fatty-acid--CoA ligase 6 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 6) (LACS 6) Length = 697 Score = 112 bits (279), Expect = 1e-24 Identities = 54/144 (37%), Positives = 83/144 (57%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K IFKL+QGEYVA E +E +Y+ + I+V+GDS K Sbjct: 535 WLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLK 594 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 + LV +V P E WA G +G++ E+C + LK+ IL ++ +++ L FE +K Sbjct: 595 AFLVGIVVPDPEVMPSWAQKKGIEGTYQELCMKKELKKAILDDMVMLGKESGLHSFEQVK 654 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + + F ++ L+T T+K +R Sbjct: 655 AIYIHCDMFSVQNGLLTPTLKAKR 678
>ACSL3_MOUSE (Q9CZW4) Long-chain-fatty-acid--CoA ligase 3 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 3) (LACS 3) Length = 720 Score = 93.6 bits (231), Expect = 4e-19 Identities = 50/144 (34%), Positives = 77/144 (53%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K + KL GEYV++ +E P+I++I Y +SY Sbjct: 559 WLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYH 618 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S ++ V P+++ + A + G+KG++ E+C S ++ +LK L+ AA L FE Sbjct: 619 SYVIGFVVPNQKELTELARTKGFKGTWEELCNSSEMENEVLKVLSEAAISASLEKFEIPL 678 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + L P P+ E LVT K +R Sbjct: 679 KIRLSPDPWTPETGLVTDAFKLKR 702
>ACSL3_RAT (Q63151) Long-chain-fatty-acid--CoA ligase 3 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 3) (LACS 3) (Brain acyl-CoA synthtase II) Length = 720 Score = 91.7 bits (226), Expect = 1e-18 Identities = 49/144 (34%), Positives = 76/144 (52%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K + KL GEYV++ +E P+I++I Y +SY Sbjct: 559 WLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYH 618 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S ++ V P+++ + A + G+ G++ E+C S ++ +LK L+ AA L FE Sbjct: 619 SYVIGFVVPNQKELTELARTKGFNGTWEELCNSSEMENEVLKVLSEAAISASLEKFEIPL 678 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + L P P+ E LVT K +R Sbjct: 679 KIRLSPDPWTPETGLVTDAFKLKR 702
>ACSL3_HUMAN (O95573) Long-chain-fatty-acid--CoA ligase 3 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 3) (LACS 3) Length = 720 Score = 90.1 bits (222), Expect = 4e-18 Identities = 49/144 (34%), Positives = 75/144 (52%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 W T DI P G K+I R K + KL GEYV++ +E P++++I Y +SY Sbjct: 559 WLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYH 618 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S ++ V P+++ + A G KG++ E+C S ++ +LK L+ AA L FE Sbjct: 619 SYVIGFVVPNQKELTELARKKGLKGTWEELCNSCEMENEVLKVLSEAAISASLEKFEIPV 678 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 + L P P+ E LVT K +R Sbjct: 679 KIRLSPEPWTPETGLVTDAFKLKR 702
>ACSL4_RAT (O35547) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) Length = 670 Score = 87.8 bits (216), Expect = 2e-17 Identities = 50/144 (34%), Positives = 76/144 (52%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI P G ++I R K + KL GEYV++ +E P+I++I + S + Sbjct: 509 WFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQ 568 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S +++ V P+++ A G +GS+ +IC + ++ ILKE+ AA KL FE Sbjct: 569 SYVISFVVPNQKKLTLLAQQKGVEGSWVDICNNPAMEAEILKEIREAANAMKLERFEIPI 628 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 V L P P+ E LVT K +R Sbjct: 629 KVRLSPEPWTPETGLVTDAFKLKR 652
>ACSL4_MOUSE (Q9QUJ7) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4) Length = 711 Score = 86.7 bits (213), Expect = 4e-17 Identities = 50/144 (34%), Positives = 75/144 (52%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI P G ++I R K + KL GEYV + +E P+I++I + S + Sbjct: 550 WFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVFLGKVEAALKNCPLIDNICAFAKSDQ 609 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S +++ V P+++ A G +GS+ +IC + ++ ILKE+ AA KL FE Sbjct: 610 SYVISFVVPNQKKLTLLAQQKGVEGSWVDICNNPAMEAEILKEIREAANAMKLERFEIPI 669 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 V L P P+ E LVT K +R Sbjct: 670 KVRLSPEPWTPETGLVTDAFKLKR 693
>ACSL4_HUMAN (O60488) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) Length = 711 Score = 86.7 bits (213), Expect = 4e-17 Identities = 49/144 (34%), Positives = 76/144 (52%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI P G ++I R K + KL GEYV++ +E P+I++I + S + Sbjct: 550 WFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQ 609 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIK 219 S +++ V P+++ A G +G++ +IC + ++ ILKE+ AA KL FE Sbjct: 610 SYVISFVVPNQKRLTLLAQQKGVEGTWVDICNNPAMEAEILKEIREAANAMKLERFEIPI 669 Query: 218 GVMLDPVPFDIERDLVTATMKKRR 147 V L P P+ E LVT K +R Sbjct: 670 KVRLSPEPWTPETGLVTDAFKLKR 693
>LCF1_SCHPO (O60135) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (Fatty acid activator 1) Length = 676 Score = 85.9 bits (211), Expect = 8e-17 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 3/147 (2%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T D+ +TP G+ ++I R K + K GEY+A+E LE Y ++ +I VY D K Sbjct: 513 WFRTGDVGELTPEGLLRIIDRKKNLVKTQNGEYIALEKLESRYRTSSLVSNICVYADQTK 572 Query: 398 SMLVAVVNPHEENTMKWAGSN---GYKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFE 228 +A++ P+E K A S+ E+C ++ +++ + +L + + E Sbjct: 573 VKPLAIIVPNEPVVRKLATEQAGLSPDASWEEVCHNKKVRQLVYDDLIRIGRSHHFANIE 632 Query: 227 YIKGVMLDPVPFDIERDLVTATMKKRR 147 I+ V+L P+ F E LVTA K +R Sbjct: 633 LIQNVVLVPIEFTPENGLVTAAQKLQR 659
>LCF4_YEAST (P47912) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (Fatty acid activator 4) Length = 694 Score = 77.8 bits (190), Expect = 2e-14 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 4/154 (2%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI TP G K+I R K + K GEY+A+E LE +Y P +++I VY D K Sbjct: 529 WFRTGDIAEWTPKGQVKIIDRKKNLVKTLNGEYIALEKLESIYRSNPYVQNICVYADENK 588 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEI---CKSEGLKEHILKELAAAAQKNKLRGFE 228 V +V P+ + K A G ++ + L++ + K++ + A+ L G E Sbjct: 589 VKPVGIVVPNLGHLSKLAIELGIMVPGEDVESYIHEKKLQDAVCKDMLSTAKSQGLNGIE 648 Query: 227 YIKGVMLDPVPFDIERDLVTATMK-KRRNYMXKV 129 + G++ + E LVT+ K KRR+ + V Sbjct: 649 LLCGIVFFEEEWTPENGLVTSAQKLKRRDILAAV 682
>LCF3_YEAST (P39002) Long-chain-fatty-acid--CoA ligase 3 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 3) (Fatty acid activator 3) Length = 694 Score = 73.2 bits (178), Expect = 5e-13 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 4/156 (2%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI TP G K+I R K + K GEY+A+E LE VY +++I VY D + Sbjct: 529 WFRTGDIVEWTPKGQLKIIDRRKNLVKTLNGEYIALEKLESVYRSNSYVKNICVYADESR 588 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEI---CKSEGLKEHILKELAAAAQKNKLRGFE 228 V +V P+ K+A +I + L+ + KE+ A A+ L G E Sbjct: 589 VKPVGIVVPNPGPLSKFAVKLRIMKKGEDIENYIHDKALRNAVFKEMIATAKSQGLVGIE 648 Query: 227 YIKGVMLDPVPFDIERDLVTATMK-KRRNYMXKVLS 123 + G++ + E VT+ K KRR + V S Sbjct: 649 LLCGIVFFDEEWTPENGFVTSAQKLKRREILAAVKS 684
>LCF2_YEAST (P39518) Long-chain-fatty-acid--CoA ligase 2 (EC 6.2.1.3) (Long-chain| acyl-CoA synthetase 2) (Fatty acid activator 2) Length = 744 Score = 67.8 bits (164), Expect = 2e-11 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFP-PIIEDIWVYGDSY 402 WF T D+ + G VI R K FKL+ GEY+A E +E +Y+ P I I+V+GD Sbjct: 569 WFSTGDVAFIDGKGRISVIDRVKNFFKLAHGEYIAPEKIENIYLSSCPYITQIFVFGDPL 628 Query: 401 KSMLVAVVNPHEENTMK-WAGSNGYKGSFSEICKSEGLKEH--ILKELAAAAQK--NKLR 237 K+ LV +V + A + ++++ E L + + KE K + L+ Sbjct: 629 KTFLVGIVGVDVDAAQPILAAKHPEVKTWTKEVLVENLNRNKKLRKEFLNKINKCTDGLQ 688 Query: 236 GFEYIKGVMLDPVPFDIERDLVTATMKKRR 147 GFE + + + P +E D+VT T K +R Sbjct: 689 GFEKLHNIKVGLEPLTLEDDVVTPTFKIKR 718
>LCF1_YEAST (P30624) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 1) (Fatty acid activator 1) Length = 700 Score = 59.3 bits (142), Expect = 8e-09 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 6/150 (4%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 WF T DI G K+I R K + K GEY+A+E LE VY + +I VY D K Sbjct: 533 WFKTGDIGEWEANGHLKIIDRKKNLVKTMNGEYIALEKLESVYRSNEYVANICVYADQSK 592 Query: 398 SMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEH------ILKELAAAAQKNKLR 237 + V ++ P+ K A G E E + +L + L Sbjct: 593 TKPVGIIVPNHAPLTKLAKKLGIMEQKDSSINIENYLEDAKLIKAVYSDLLKTGKDQGLV 652 Query: 236 GFEYIKGVMLDPVPFDIERDLVTATMKKRR 147 G E + G++ + + VT+ K +R Sbjct: 653 GIELLAGIVFFDGEWTPQNGFVTSAQKLKR 682
>ORA_PLAFN (P16405) Octapeptide-repeat antigen (ORA) (Fragment)| Length = 701 Score = 49.7 bits (117), Expect = 6e-06 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 14/166 (8%) Frame = -2 Query: 578 WFXTXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYK 399 +F T DI + G + R K + KLSQGEY+ E + +Y P + YGD Sbjct: 465 YFKTGDIVQINDNGSLTFLDRSKGLVKLSQGEYIETEMINNLYSQIPFVNFCVAYGDDSM 524 Query: 398 SMLVAVVNPHE---------ENTMKWAGSNGYKGSFSEICKSEGLK-----EHILKELAA 261 + +++ + +N +K G + + +FSE E L +++ ++ Sbjct: 525 DGPLGIISVDKHKLFTFLKNDNMLKTTGVD--EKNFSEKLIDETLNDPIYVDYVKGKMME 582 Query: 260 AAQKNKLRGFEYIKGVMLDPVPFDIERDLVTATMKKRRNYMXKVLS 123 +K L + I + L P+D + +T T+K RR + K S Sbjct: 583 IYKKTNLNRYNVINDIYLTSKPWD-TTNYLTPTLKIRRFNVFKDFS 627
>LCFH_HAEIN (P44446) Putative long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase) (LACS) Length = 607 Score = 40.0 bits (92), Expect = 0.005 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 2/143 (1%) Frame = -2 Query: 569 TXDIXXMTPXGIXKVIXRXKXIFKLSQGEYVAVEYLEKVYVFPPIIEDIWVYGDSYKSML 390 T D G + R K + K S G+Y+A +Y+E IE I + D+ K + Sbjct: 449 TGDAGEFDEQGNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADA-KKYV 507 Query: 389 VAVVNPHEENTMKWAGSNG--YKGSFSEICKSEGLKEHILKELAAAAQKNKLRGFEYIKG 216 A++ P ++ ++A Y + S+ LK + E A + +L FE +K Sbjct: 508 SALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILK---MFEHRINAVQKELAHFEQVKK 564 Query: 215 VMLDPVPFDIERDLVTATMKKRR 147 L F I+ +T T+K RR Sbjct: 565 FTLLSQAFSIKLGEITPTLKLRR 587
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 138 HVVSSLLHCCSDQIPFNVKRYRVQHYTFDVLETS*LVLLCSRCEL 272 H S L++ CS ++ FN KR+ QH+ +V +T V C C L Sbjct: 855 HKPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQAGVFKCPECPL 899
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 33.1 bits (74), Expect = 0.59 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 138 HVVSSLLHCCSDQIPFNVKRYRVQHYTFDVLETS*LVLLCSRCEL 272 H S L++ CS ++ FN KR+ QH+ +V +T V C C L Sbjct: 855 HRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPECPL 899
>CARA_RALSO (Q8XZ85) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 378 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = -2 Query: 392 LVAVVNPHEENTMKWAGSNGY----KGSFSEICKSEGLKEHILKELA 264 +V+V P+E N +WA GY K F + G+K +IL+ LA Sbjct: 163 VVSVTQPYEWNQTEWALGRGYGVQDKPQFHVVAYDFGVKYNILRMLA 209
>RAD2_SCHPO (P39750) DNA-repair protein rad2| Length = 380 Score = 30.0 bits (66), Expect = 5.0 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 440 PIIEDIWVYGDSYKSMLVAVVNPHEENTMKWAGSNGYKGSFSEICKSEGLKEHILK 273 PI ED W Y D+ + L A V P EE +KW + G + K +G E +K Sbjct: 270 PIPED-WPYEDARRLFLDAEVLPGEEIELKWKSPDA-DGIIQFLVKEKGFNEDRVK 323 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,703,090 Number of Sequences: 219361 Number of extensions: 1402421 Number of successful extensions: 3159 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3159 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
