Clone Name | rbasd23g16 |
---|---|
Clone Library Name | barley_pub |
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 99.8 bits (247), Expect = 4e-21 Identities = 50/112 (44%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Frame = -1 Query: 491 YRALWARYSRVIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEEL 312 Y+ALW +Y IDYVNFQFY Y A T V+ ++ +++ Q+ Y G KVL S +T+ Sbjct: 194 YQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSF----STDSS 249 Query: 311 GLLSPDQGIAAAKELL-RQNKLPGFFIWSADSSXQSDYKFTYETRAQEIVAN 159 G L PD G A +L +Q KL G F+WSAD S S+ F YE +AQ ++A+ Sbjct: 250 GGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLAS 301
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 94.0 bits (232), Expect = 2e-19 Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Frame = -1 Query: 491 YRALWARYSRVIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEEL 312 Y+ALW +Y IDYVNFQFY Y + V+ ++ +++ Q YPG KVL S +T+ Sbjct: 168 YQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSF----STDNS 223 Query: 311 GLLSPDQGIAAAKELL-RQNKLPGFFIWSADSSXQSDYKFTYETRAQEIVAN 159 G L P G A +L +Q KL G F+WSAD S S+ F YE +AQ ++A+ Sbjct: 224 GGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275
>CARB_SYNY3 (Q55756) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 Score = 33.9 bits (76), Expect = 0.24 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Frame = -1 Query: 476 ARYSRVIDYVNFQFYGYG-------ANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTE 318 AR V+ +N Q+ G AN V + + TG P AK+ + + +GKT E Sbjct: 825 ARALNVVGLMNIQYAVQGDQVYILEANPRASRTVPYVSKATGR-PLAKIASLVMSGKTLE 883 Query: 317 ELGLLSP--DQGIAAAKELLRQNKLPG 243 ELG+ Q +A + +L +K PG Sbjct: 884 ELGVTEEFIPQHVAVKEAVLPFSKFPG 910
>CARB_ANASP (Q8YQL2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1104 Score = 31.6 bits (70), Expect = 1.2 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 440 QFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEELGLLSP--DQGIAAAKEL 267 Q Y AN V F + TG P AK+ + + +GKT EEL IA + + Sbjct: 866 QVYILEANPRASRTVPFVSKATGV-PLAKLASLIMSGKTLEELNFTQEVIPSHIAVKEAV 924 Query: 266 LRQNKLPG 243 L NK PG Sbjct: 925 LPFNKFPG 932
>KPRS_BACSU (P14193) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 317 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 392 FYDRQTGYYPGAKVLASLQTGKTTEELGLLSPDQ-GIAAAKELLRQNKLP 246 F+D + G +L GK E++ ++SPD G+ A++L + K P Sbjct: 143 FFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAP 192
>SYH_SYMTH (Q67LN9) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 432 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 461 VIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLA 345 +++YV+ +G GA TD+ T MF G P A+ +A Sbjct: 49 MVEYVDLFIHGVGATTDIVTKEMFNITPRGDDPDARRMA 87
>CARB_THET2 (P96495) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1028 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = -1 Query: 449 VNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEELGL--LSPDQGIAAA 276 V + Y AN V F + G P AK+ A + GKT +ELG+ L P AA Sbjct: 829 VGEEVYVLEANPRASRTVPFVSKAIGV-PLAKLAALIAVGKTLKELGVRDLDPVPPYYAA 887 Query: 275 KELL 264 KE++ Sbjct: 888 KEVV 891
>FTHS_THEMA (Q9X287) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 542 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 431 GYGANTDVQTYVMFYDRQTGYYPGAKVLAS 342 G+GA+ + ++ F R G+YP A VL + Sbjct: 288 GFGADLGAEKFIDFVSRVGGFYPNAAVLVA 317 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,001,023 Number of Sequences: 219361 Number of extensions: 905612 Number of successful extensions: 2182 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2180 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)