ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480928.1| Oryza sativa (japonica cultivar-group), mRNA 333 5e-88
2ref|XM_507176.1| PREDICTED Oryza sativa (japonica cultivar-group... 333 5e-88
3dbj|AK103204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 5e-88
4dbj|AK060264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 5e-88
5gb|AY109135.1| Zea mays PCO079440 mRNA sequence 274 4e-70
6gb|BT017491.1| Zea mays clone EL01N0413D02.c mRNA sequence 226 8e-56
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
8dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
9gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete s... 82 3e-12
10ref|XM_600317.2| PREDICTED: Bos taurus similar to KARP-1 binding... 42 2.5
11emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 2.5
12gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer In... 42 2.5
13gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complet... 42 2.5
14gb|AC150416.2| Branchiostoma floridae clone CH302-63L21, complet... 40 9.7
15gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 40 9.7
16gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, compl... 40 9.7
17gb|AC162612.2| Mus musculus chromosome 19, clone RP24-334K20, co... 40 9.7
18gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosom... 40 9.7
19emb|CR382330.9| Zebrafish DNA sequence from clone CH211-180N24 i... 40 9.7
20gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, co... 40 9.7
21emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 40 9.7
22gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s... 40 9.7
23emb|AL353586.14| Human DNA sequence from clone RP11-347I22 on ch... 40 9.7
24emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on ch... 40 9.7
25emb|AL139189.14| Human DNA sequence from clone RP11-94F16 on chr... 40 9.7
26emb|AL133383.10| Human DNA sequence from clone GS1-204I12 on chr... 40 9.7
27emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005... 40 9.7
28gb|AC022790.8| Homo sapiens chromosome 8, clone RP11-744J10, com... 40 9.7
29emb|BX248092.16| Zebrafish DNA sequence from clone CH211-194K22 ... 40 9.7
30gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, co... 40 9.7
31gb|AC090371.4| Homo sapiens chromosome 18, clone RP11-746B8, com... 40 9.7
32gb|AE015927.1| Clostridium tetani E88, complete genome 40 9.7
33gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complet... 40 9.7
34gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complet... 40 9.7
35gb|AF042090.1|AF042090 Homo sapiens chromosome 21q22.3 PAC 171F1... 40 9.7
36gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromoso... 40 9.7 
>ref|XM_480928.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1347

 Score =  333 bits (168), Expect = 5e-88
 Identities = 287/327 (87%)
 Strand = Plus / Minus

                                                                        
Query: 337  cgcctcatgctcggcatccaggccacttaacctccttggtttatcagacttggagaagtg 396
            ||||||| |||| |||||||  ||||| ||||||||||||||||||||||| |  |||||
Sbjct: 1226 cgcctcacgctcagcatccaatccactcaacctccttggtttatcagacttcgtaaagtg 1167

                                                                        
Query: 397  cttagacatgatggacgcctgctcttggatgatgcttctggcttcaactaactgagcttc 456
            ||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||  ||||||||
Sbjct: 1166 cttggacatgagggatgcctgctcctggataatgcttctagcttcaactagttgagcttc 1107

                                                                        
Query: 457  aagctcaagttcacgctcggtaacttccgaggtcacttcagcaactttttgagcatcttg 516
            ||| |||||||| ||||||||| |||| || |||||||| ||| | ||||| ||||||||
Sbjct: 1106 aagttcaagttcccgctcggtagcttctgatgtcacttctgcacccttttgggcatcttg 1047

                                                                        
Query: 517  aagttgtgtcatacgtgcctttactgaagccattttagtgcgcaaactctcctctatctg 576
            |||||||||||| || |||||||  |||||||||||||||||||||||||| || |||||
Sbjct: 1046 aagttgtgtcattcgggcctttatggaagccattttagtgcgcaaactctcttcaatctg 987

                                                                        
Query: 577  gtctctggccatgtgaaagggcaagtcaaagacatccgtcttgcccccaagtgggggctg 636
            |||||| ||||||||||||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 986  gtctctagccatgtgaaagggcaaatcaaagacatccgtcttgccaccaagtggagactg 927

                                       
Query: 637  gggagaccctgcctnctgtcttccatt 663
             ||||| ||||||| ||||| ||||||
Sbjct: 926  aggagatcctgcctcctgtcgtccatt 900
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>ref|XM_507176.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0070J06.4
            patrial mRNA
          Length = 1350

 Score =  333 bits (168), Expect = 5e-88
 Identities = 287/327 (87%)
 Strand = Plus / Minus

                                                                        
Query: 337  cgcctcatgctcggcatccaggccacttaacctccttggtttatcagacttggagaagtg 396
            ||||||| |||| |||||||  ||||| ||||||||||||||||||||||| |  |||||
Sbjct: 1229 cgcctcacgctcagcatccaatccactcaacctccttggtttatcagacttcgtaaagtg 1170

                                                                        
Query: 397  cttagacatgatggacgcctgctcttggatgatgcttctggcttcaactaactgagcttc 456
            ||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||  ||||||||
Sbjct: 1169 cttggacatgagggatgcctgctcctggataatgcttctagcttcaactagttgagcttc 1110

                                                                        
Query: 457  aagctcaagttcacgctcggtaacttccgaggtcacttcagcaactttttgagcatcttg 516
            ||| |||||||| ||||||||| |||| || |||||||| ||| | ||||| ||||||||
Sbjct: 1109 aagttcaagttcccgctcggtagcttctgatgtcacttctgcacccttttgggcatcttg 1050

                                                                        
Query: 517  aagttgtgtcatacgtgcctttactgaagccattttagtgcgcaaactctcctctatctg 576
            |||||||||||| || |||||||  |||||||||||||||||||||||||| || |||||
Sbjct: 1049 aagttgtgtcattcgggcctttatggaagccattttagtgcgcaaactctcttcaatctg 990

                                                                        
Query: 577  gtctctggccatgtgaaagggcaagtcaaagacatccgtcttgcccccaagtgggggctg 636
            |||||| ||||||||||||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 989  gtctctagccatgtgaaagggcaaatcaaagacatccgtcttgccaccaagtggagactg 930

                                       
Query: 637  gggagaccctgcctnctgtcttccatt 663
             ||||| ||||||| ||||| ||||||
Sbjct: 929  aggagatcctgcctcctgtcgtccatt 903
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>dbj|AK103204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122D05, full
            insert sequence
          Length = 1601

 Score =  333 bits (168), Expect = 5e-88
 Identities = 287/327 (87%)
 Strand = Plus / Minus

                                                                        
Query: 337  cgcctcatgctcggcatccaggccacttaacctccttggtttatcagacttggagaagtg 396
            ||||||| |||| |||||||  ||||| ||||||||||||||||||||||| |  |||||
Sbjct: 1226 cgcctcacgctcagcatccaatccactcaacctccttggtttatcagacttcgtaaagtg 1167

                                                                        
Query: 397  cttagacatgatggacgcctgctcttggatgatgcttctggcttcaactaactgagcttc 456
            ||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||  ||||||||
Sbjct: 1166 cttggacatgagggatgcctgctcctggataatgcttctagcttcaactagttgagcttc 1107

                                                                        
Query: 457  aagctcaagttcacgctcggtaacttccgaggtcacttcagcaactttttgagcatcttg 516
            ||| |||||||| ||||||||| |||| || |||||||| ||| | ||||| ||||||||
Sbjct: 1106 aagttcaagttcccgctcggtagcttctgatgtcacttctgcacccttttgggcatcttg 1047

                                                                        
Query: 517  aagttgtgtcatacgtgcctttactgaagccattttagtgcgcaaactctcctctatctg 576
            |||||||||||| || |||||||  |||||||||||||||||||||||||| || |||||
Sbjct: 1046 aagttgtgtcattcgggcctttatggaagccattttagtgcgcaaactctcttcaatctg 987

                                                                        
Query: 577  gtctctggccatgtgaaagggcaagtcaaagacatccgtcttgcccccaagtgggggctg 636
            |||||| ||||||||||||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 986  gtctctagccatgtgaaagggcaaatcaaagacatccgtcttgccaccaagtggagactg 927

                                       
Query: 637  gggagaccctgcctnctgtcttccatt 663
             ||||| ||||||| ||||| ||||||
Sbjct: 926  aggagatcctgcctcctgtcgtccatt 900
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>dbj|AK060264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B09, full
            insert sequence
          Length = 1556

 Score =  333 bits (168), Expect = 5e-88
 Identities = 287/327 (87%)
 Strand = Plus / Minus

                                                                        
Query: 337  cgcctcatgctcggcatccaggccacttaacctccttggtttatcagacttggagaagtg 396
            ||||||| |||| |||||||  ||||| ||||||||||||||||||||||| |  |||||
Sbjct: 1229 cgcctcacgctcagcatccaatccactcaacctccttggtttatcagacttcgtaaagtg 1170

                                                                        
Query: 397  cttagacatgatggacgcctgctcttggatgatgcttctggcttcaactaactgagcttc 456
            ||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||  ||||||||
Sbjct: 1169 cttggacatgagggatgcctgctcctggataatgcttctagcttcaactagttgagcttc 1110

                                                                        
Query: 457  aagctcaagttcacgctcggtaacttccgaggtcacttcagcaactttttgagcatcttg 516
            ||| |||||||| ||||||||| |||| || |||||||| ||| | ||||| ||||||||
Sbjct: 1109 aagttcaagttcccgctcggtagcttctgatgtcacttctgcacccttttgggcatcttg 1050

                                                                        
Query: 517  aagttgtgtcatacgtgcctttactgaagccattttagtgcgcaaactctcctctatctg 576
            |||||||||||| || |||||||  |||||||||||||||||||||||||| || |||||
Sbjct: 1049 aagttgtgtcattcgggcctttatggaagccattttagtgcgcaaactctcttcaatctg 990

                                                                        
Query: 577  gtctctggccatgtgaaagggcaagtcaaagacatccgtcttgcccccaagtgggggctg 636
            |||||| ||||||||||||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 989  gtctctagccatgtgaaagggcaaatcaaagacatccgtcttgccaccaagtggagactg 930

                                       
Query: 637  gggagaccctgcctnctgtcttccatt 663
             ||||| ||||||| ||||| ||||||
Sbjct: 929  aggagatcctgcctcctgtcgtccatt 903
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>gb|AY109135.1| Zea mays PCO079440 mRNA sequence
          Length = 1613

 Score =  274 bits (138), Expect = 4e-70
 Identities = 262/303 (86%), Gaps = 3/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 371  cttggtttatcagacttggagaagtgcttagacatgatggacgcctgctcttggatgatg 430
            ||||| ||||||||||||   |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 1290 cttggcttatcagacttg---aagtgcttggacatgatgcaggcctgctcttggatgatg 1234

                                                                        
Query: 431  cttctggcttcaactaactgagcttcaagctcaagttcacgctcggtaacttccgaggtc 490
            ||||| |||||||| |  ||||||||||||||||| || || || ||  | || || |||
Sbjct: 1233 cttcttgcttcaaccagttgagcttcaagctcaagctcccggtcagttgcctcagaagtc 1174

                                                                        
Query: 491  acttcagcaactttttgagcatcttgaagttgtgtcatacgtgcctttactgaagccatt 550
            ||||| ||| |||| ||||||||||||||||||||||| |||||||| | ||||| ||||
Sbjct: 1173 acttctgcacctttctgagcatcttgaagttgtgtcattcgtgccttgattgaagtcatt 1114

                                                                        
Query: 551  ttagtgcgcaaactctcctctatctggtctctggccatgtgaaagggcaagtcaaagaca 610
            || |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1113 tttgtgcgcaaactctcttctatctgatctctggccatatgaaagggcaagtcaaaaaca 1054

                                                                        
Query: 611  tccgtcttgcccccaagtgggggctggggagaccctgcctnctgtcttccattaccagca 670
            ||||||||||| ||||| || | ||| |||||||||| || ||||||||||||| ||| |
Sbjct: 1053 tccgtcttgccaccaagcggagactgaggagaccctgactcctgtcttccattatcagta 994

               
Query: 671  aca 673
            |||
Sbjct: 993  aca 991
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>gb|BT017491.1| Zea mays clone EL01N0413D02.c mRNA sequence
          Length = 906

 Score =  226 bits (114), Expect = 8e-56
 Identities = 256/303 (84%), Gaps = 3/303 (0%)
 Strand = Plus / Plus

                                                                       
Query: 371 cttggtttatcagacttggagaagtgcttagacatgatggacgcctgctcttggatgatg 430
           ||||| ||||||||||||   |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 348 cttggcttatcagacttg---aagtgcttggacatgatgcaggcctgctcttggatgatg 404

                                                                       
Query: 431 cttctggcttcaactaactgagcttcaagctcaagttcacgctcggtaacttccgaggtc 490
           ||||| | |||||| |  ||||||||||||||||| || ||  | ||    || || |||
Sbjct: 405 cttcttggttcaaccagttgagcttcaagctcaagctcccgggcagttggctcagaagtc 464

                                                                       
Query: 491 acttcagcaactttttgagcatcttgaagttgtgtcatacgtgcctttactgaagccatt 550
           ||||| ||| |||| ||||||||||||||||| ||||| |||||||| | ||||| ||||
Sbjct: 465 acttctgcacctttctgagcatcttgaagttgggtcattcgtgccttgattgaagtcatt 524

                                                                       
Query: 551 ttagtgcgcaaactctcctctatctggtctctggccatgtgaaagggcaagtcaaagaca 610
           || | ||| |||||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 525 tttgggcggaaactctcttctatctgatctctggccatatgaaagggcaagtcaaaaaca 584

                                                                       
Query: 611 tccgtcttgcccccaagtgggggctggggagaccctgcctnctgtcttccattaccagca 670
           ||||||||||| ||||| || | ||| |||||||||| || ||||||||||||| ||| |
Sbjct: 585 tccgtcttgccaccaagcggagactgaggagaccctgactcctgtcttccattatcagta 644

              
Query: 671 aca 673
           |||
Sbjct: 645 aca 647
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  117 bits (59), Expect = 5e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                           
Query: 414     cctgctcttggatgatgcttctggcttcaactaactgagcttcaagctcaagttcacgct 473
               ||||||| ||||| |||||||| ||||||||||  ||||||||||| |||||||| ||||
Sbjct: 8675908 cctgctcctggataatgcttctagcttcaactagttgagcttcaagttcaagttcccgct 8675967

                                                                      
Query: 474     cggtaacttccgaggtcacttcagcaactttttgagcatcttgaagttgtgtcat 528
               ||||| |||| || |||||||| ||| | ||||| ||||||||||||||||||||
Sbjct: 8675968 cggtagcttctgatgtcacttctgcacccttttgggcatcttgaagttgtgtcat 8676022



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                           
Query: 542     gaagccattttagtgcgcaaactctcctctatctggtctctggccatgtgaaagggcaag 601
               |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| 
Sbjct: 8676155 gaagccattttagtgcgcaaactctcttcaatctggtctctagccatgtgaaagggcaaa 8676214

                           
Query: 602     tcaaagacatcc 613
               ||||||||||||
Sbjct: 8676215 tcaaagacatcc 8676226



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 370     ccttggtttatcagacttggagaagtgcttagacatgatggacgcctgc 418
               |||||||||||||||||| |  |||||||| ||||||| ||| ||||||
Sbjct: 8675717 ccttggtttatcagacttcgtaaagtgcttggacatgagggatgcctgc 8675765
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>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score =  117 bits (59), Expect = 5e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                         
Query: 414   cctgctcttggatgatgcttctggcttcaactaactgagcttcaagctcaagttcacgct 473
             ||||||| ||||| |||||||| ||||||||||  ||||||||||| |||||||| ||||
Sbjct: 18887 cctgctcctggataatgcttctagcttcaactagttgagcttcaagttcaagttcccgct 18946

                                                                    
Query: 474   cggtaacttccgaggtcacttcagcaactttttgagcatcttgaagttgtgtcat 528
             ||||| |||| || |||||||| ||| | ||||| ||||||||||||||||||||
Sbjct: 18947 cggtagcttctgatgtcacttctgcacccttttgggcatcttgaagttgtgtcat 19001



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                         
Query: 542   gaagccattttagtgcgcaaactctcctctatctggtctctggccatgtgaaagggcaag 601
             |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| 
Sbjct: 19134 gaagccattttagtgcgcaaactctcttcaatctggtctctagccatgtgaaagggcaaa 19193

                         
Query: 602   tcaaagacatcc 613
             ||||||||||||
Sbjct: 19194 tcaaagacatcc 19205



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 370   ccttggtttatcagacttggagaagtgcttagacatgatggacgcctgc 418
             |||||||||||||||||| |  |||||||| ||||||| ||| ||||||
Sbjct: 18696 ccttggtttatcagacttcgtaaagtgcttggacatgagggatgcctgc 18744
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>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence
          Length = 115452

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                         
Query: 414   cctgctcttggatgatgcttctggcttcaactaactgagcttcaagctcaagttcacgct 473
             |||||||||| || ||||| || |||||||| |  |||||||||||||||||||| | ||
Sbjct: 80870 cctgctcttgtataatgctccttgcttcaacaagttgagcttcaagctcaagttctctct 80811

                                                              
Query: 474   cggtaacttccgaggtcacttcagcaactttttgagcatcttgaagttg 522
             ||||| ||||||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 80810 cggtagcttccgaagtgacttcggcctctttctgagcatcttgcagttg 80762
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>ref|XM_600317.2| PREDICTED: Bos taurus similar to KARP-1 binding protein 1
            (LOC522044), mRNA
          Length = 7216

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 619  gcccccaagtgggggctgggg 639
            |||||||||||||||||||||
Sbjct: 1513 gcccccaagtgggggctgggg 1533
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 442     aactaactgagcttcaagctc 462
               |||||||||||||||||||||
Sbjct: 1260241 aactaactgagcttcaagctc 1260261
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>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
             Library) complete sequence
          Length = 148984

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 532   tgcctttactgaagccatttt 552
             |||||||||||||||||||||
Sbjct: 54890 tgcctttactgaagccatttt 54870
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>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence
          Length = 182507

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 532    tgcctttactgaagccatttt 552
              |||||||||||||||||||||
Sbjct: 123101 tgcctttactgaagccatttt 123081
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>gb|AC150416.2| Branchiostoma floridae clone CH302-63L21, complete sequence
          Length = 164084

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   ttaacctccttggtttatca 382
             ||||||||||||||||||||
Sbjct: 15602 ttaacctccttggtttatca 15621
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>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     actgtttcatcaaagaggaa 91
              ||||||||||||||||||||
Sbjct: 116456 actgtttcatcaaagaggaa 116475
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>gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, complete sequence
          Length = 181769

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   acacatctgtagaagcagaa 331
             ||||||||||||||||||||
Sbjct: 25775 acacatctgtagaagcagaa 25794
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>gb|AC162612.2| Mus musculus chromosome 19, clone RP24-334K20, complete sequence
          Length = 145561

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   catctgtagaagcagaatga 334
             ||||||||||||||||||||
Sbjct: 17921 catctgtagaagcagaatga 17902
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>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence
          Length = 194871

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    ttcagcaactttttgagcat 512
              ||||||||||||||||||||
Sbjct: 175625 ttcagcaactttttgagcat 175606
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>emb|CR382330.9| Zebrafish DNA sequence from clone CH211-180N24 in linkage group 17,
             complete sequence
          Length = 124922

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gaactgaaattcgcgatgaa 302
             ||||||||||||||||||||
Sbjct: 87956 gaactgaaattcgcgatgaa 87937
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>gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, complete sequence
          Length = 242249

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    catctgtagaagcagaatga 334
              ||||||||||||||||||||
Sbjct: 205230 catctgtagaagcagaatga 205211
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>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     taagactgtttcatcaaaga 87
              ||||||||||||||||||||
Sbjct: 275033 taagactgtttcatcaaaga 275014
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>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 659   ccattaccagcaacaacagc 678
             ||||||||||||||||||||
Sbjct: 52540 ccattaccagcaacaacagc 52559



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 659   ccattaccagcaacaacagc 678
             ||||||||||||||||||||
Sbjct: 49154 ccattaccagcaacaacagc 49173
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>emb|AL353586.14| Human DNA sequence from clone RP11-347I22 on chromosome 10 Contains the
             3' end of a novel gene (DKFZP761F241) (FLJ38473 FLJ20925),
             complete sequence
          Length = 97608

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   tggatgatgcttctggcttc 441
             ||||||||||||||||||||
Sbjct: 34286 tggatgatgcttctggcttc 34267
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>emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on chromosome 9, complete
             sequence
          Length = 126815

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   atgatgcttctggcttcaac 444
             ||||||||||||||||||||
Sbjct: 49834 atgatgcttctggcttcaac 49853
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>emb|AL139189.14| Human DNA sequence from clone RP11-94F16 on chromosome 13, complete
            sequence
          Length = 119395

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   gcataagactgtttcatcaa 84
            ||||||||||||||||||||
Sbjct: 2908 gcataagactgtttcatcaa 2889
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>emb|AL133383.10| Human DNA sequence from clone GS1-204I12 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 204158

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   gtgcctttactgaagccatt 550
             ||||||||||||||||||||
Sbjct: 63490 gtgcctttactgaagccatt 63509
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>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the
             PSMA7 gene for proteasome (prosome, macropain) subunit
             alpha type 7, the HRH3 gene for histamine receptor H3, the
             SS18L1 gene for synovial sarcoma translocation gene on
             chromosome 18-like 1, the GTPBP5 gene for GTP binding
             protein 5 (putative), the 3' end of the C20orf40 gene for
             a novel protein similar to Pleurodeles waltlii RAP55
             protein and seven CpG islands, complete sequence
          Length = 100976

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ccaggccacttaacctcctt 373
             ||||||||||||||||||||
Sbjct: 25818 ccaggccacttaacctcctt 25799
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>gb|AC022790.8| Homo sapiens chromosome 8, clone RP11-744J10, complete sequence
          Length = 204034

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   tgatgcttctggcttcaact 445
             ||||||||||||||||||||
Sbjct: 21962 tgatgcttctggcttcaact 21981
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>emb|BX248092.16| Zebrafish DNA sequence from clone CH211-194K22 in linkage group 12,
              complete sequence
          Length = 217001

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    tttactgaagccattttagt 555
              ||||||||||||||||||||
Sbjct: 121022 tttactgaagccattttagt 121003
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>gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, complete sequence
          Length = 212337

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    tgatgcttctggcttcaact 445
              ||||||||||||||||||||
Sbjct: 171987 tgatgcttctggcttcaact 172006
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>gb|AC090371.4| Homo sapiens chromosome 18, clone RP11-746B8, complete sequence
          Length = 173028

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 660   cattaccagcaacaacagcc 679
             ||||||||||||||||||||
Sbjct: 87643 cattaccagcaacaacagcc 87624
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     atgaatatatctttacacat 317
               ||||||||||||||||||||
Sbjct: 2037991 atgaatatatctttacacat 2037972
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>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence
          Length = 153629

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   ttcagcaactttttgagcat 512
             ||||||||||||||||||||
Sbjct: 75512 ttcagcaactttttgagcat 75493
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>gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complete sequence
          Length = 168141

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    acacatctgtagaagcagaa 331
              ||||||||||||||||||||
Sbjct: 104836 acacatctgtagaagcagaa 104855
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>gb|AF042090.1|AF042090 Homo sapiens chromosome 21q22.3 PAC 171F15, complete sequence
          Length = 155407

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     taagactgtttcatcaaaga 87
              ||||||||||||||||||||
Sbjct: 113250 taagactgtttcatcaaaga 113231
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>gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromosome unknown, complete
              sequence
          Length = 221338

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    cctttactgaagccatttta 553
              ||||||||||||||||||||
Sbjct: 100120 cctttactgaagccatttta 100139


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,386,486
Number of Sequences: 3902068
Number of extensions: 5386486
Number of successful extensions: 101697
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101566
Number of HSP's gapped (non-prelim): 128
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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