Clone Name | rbasd23f20 |
---|---|
Clone Library Name | barley_pub |
>gb|AC017096.8| Homo sapiens BAC clone RP11-530J6 from 2, complete sequence Length = 132063 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 taacttgtctccttgccactc 156 ||||||||||||||||||||| Sbjct: 63888 taacttgtctccttgccactc 63868
>emb|AL592308.3| Human DNA sequence from clone RP13-610P22 on chromosome 1, complete sequence Length = 170581 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 gaaggaaacagtaggatattaccttctt 113 |||||||||||||||||| | ||||||| Sbjct: 3230 gaaggaaacagtaggataattccttctt 3203
>gb|AC012097.8| Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR29H04, complete sequence Length = 155670 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ctttcccttatgttttcctt 85 |||||||||||||||||||| Sbjct: 28472 ctttcccttatgttttcctt 28491
>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone BACR17D02, complete sequence Length = 186748 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctttcccttatgttttcctt 85 |||||||||||||||||||| Sbjct: 84142 ctttcccttatgttttcctt 84123
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gattgattccaaagcatatt 51 |||||||||||||||||||| Sbjct: 23318170 gattgattccaaagcatatt 23318189
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gattgattccaaagcatatt 51 |||||||||||||||||||| Sbjct: 43868 gattgattccaaagcatatt 43887
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gattgattccaaagcatatt 51 |||||||||||||||||||| Sbjct: 104912 gattgattccaaagcatatt 104931
>emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-369C8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176399 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttgttttctgattgattcca 42 |||||||||||||||||||| Sbjct: 57716 ttgttttctgattgattcca 57735
>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete sequence Length = 299804 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctttcccttatgttttcctt 85 |||||||||||||||||||| Sbjct: 139315 ctttcccttatgttttcctt 139296
>emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-945F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201539 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ttgttttctgattgattcca 42 |||||||||||||||||||| Sbjct: 186793 ttgttttctgattgattcca 186812
>emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-185P18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163096 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ctttcccttatgttttcctt 85 |||||||||||||||||||| Sbjct: 76596 ctttcccttatgttttcctt 76577 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,250,494 Number of Sequences: 3902068 Number of extensions: 2250494 Number of successful extensions: 40150 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40122 Number of HSP's gapped (non-prelim): 28 length of query: 342 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 320 effective length of database: 17,147,199,772 effective search space: 5487103927040 effective search space used: 5487103927040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)