ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group... 246 7e-62
2ref|XM_477827.1| Oryza sativa (japonica cultivar-group), mRNA 246 7e-62
3dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
4dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
6dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
7dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
8gb|AY105646.1| Zea mays PCO146542 mRNA sequence 141 3e-30
9gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1)... 105 2e-19
10ref|XM_475467.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
11dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80... 58 4e-05
14gb|AY019185.1| Oryza sativa microsatellite MRG1510 containing (A... 52 0.002
15ref|XM_474250.1| Oryza sativa (japonica cultivar-group), predic... 48 0.035
16gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete s... 48 0.035
17gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete se... 48 0.035
18dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
19dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds 48 0.035
20dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
21gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.54
22gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03... 44 0.54
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
24gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, comp... 42 2.1
25dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.1
26dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clon... 42 2.1
27gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, co... 40 8.4
28ref|XM_481816.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
29ref|XM_483734.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
30ref|XM_866713.1| PREDICTED: Bos taurus similar to Mannosyl-oligo... 40 8.4
31gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromo... 40 8.4
32gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromo... 40 8.4
33gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, co... 40 8.4
34emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on ch... 40 8.4
35gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosom... 40 8.4
36gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complet... 40 8.4
37gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome... 40 8.4
38emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chr... 40 8.4
39emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 40 8.4
40emb|AJ635272.1| Prunus avium partial S-RNase gene for ribonuclea... 40 8.4
41dbj|AK137125.1| Mus musculus 12 days embryo embryonic body betwe... 40 8.4
42dbj|AK149851.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.4
43gb|AC154792.2| Mus musculus BAC clone RP23-85E10 from chromosome... 40 8.4
44gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, com... 40 8.4
45dbj|AK032044.1| Mus musculus adult male medulla oblongata cDNA, ... 40 8.4
46dbj|AK079336.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.4
47dbj|AK034353.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 8.4
48dbj|AK041972.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 8.4
49dbj|AK011266.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 8.4
50dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
52gb|AC009058.10| Homo sapiens chromosome 16 clone RP11-292B23, co... 40 8.4
53gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7,... 40 8.4
54gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112... 40 8.4
55dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
56dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
57dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
58dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
59emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chr... 40 8.4
60emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chr... 40 8.4
61emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chr... 40 8.4 
>ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group), P0443H10.4 mRNA
          Length = 1940

 Score =  246 bits (124), Expect = 7e-62
 Identities = 247/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 299  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 358
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1469 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1410

                                                                        
Query: 359  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 418
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1409 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1350

                                                                        
Query: 419  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 478
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1349 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1290

                                                                        
Query: 479  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 538
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| ||||
Sbjct: 1289 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctcttt 1230

                                                            
Query: 539  tgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 586
            || ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1229 tggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1182



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 27   aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
            |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1776 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1720
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>ref|XM_477827.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1873

 Score =  246 bits (124), Expect = 7e-62
 Identities = 247/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 299  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 358
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1487 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1428

                                                                        
Query: 359  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 418
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1427 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1368

                                                                        
Query: 419  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 478
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1367 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1308

                                                                        
Query: 479  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 538
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| ||||
Sbjct: 1307 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctcttt 1248

                                                            
Query: 539  tgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 586
            || ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1247 tggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1200



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 27   aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
            |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1794 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1738
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>dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160O05, full
            insert sequence
          Length = 1941

 Score =  246 bits (124), Expect = 7e-62
 Identities = 247/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 299  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 358
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1469 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1410

                                                                        
Query: 359  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 418
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1409 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1350

                                                                        
Query: 419  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 478
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1349 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1290

                                                                        
Query: 479  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 538
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| ||||
Sbjct: 1289 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctcttt 1230

                                                            
Query: 539  tgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 586
            || ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1229 tggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1182



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 27   aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
            |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1776 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1720
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>dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E04, full
            insert sequence
          Length = 1873

 Score =  246 bits (124), Expect = 7e-62
 Identities = 247/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 299  tcacctgattctgctcgctcggttgttccattttgactgttatttggaacatccttcacg 358
            ||||||||||||| | | | || | |||| || |||||||| | ||||||||||||||||
Sbjct: 1487 tcacctgattctgtttgtttggctattccgttctgactgttctctggaacatccttcacg 1428

                                                                        
Query: 359  gtagaagattctggggggtcagaaggtaactttgatccttctgccgacgttgaagcatcc 418
            | ||||||||||||  | ||||||| |  ||||| ||||||||| || ||||||||||||
Sbjct: 1427 gcagaagattctggaagatcagaagatggctttgttccttctgctgaggttgaagcatcc 1368

                                                                        
Query: 419  agcgccttgtctgcagcaggattgcattgctgctcgatcataatctgaaggcacttccct 478
            | |||||||||||   ||||  |||| |||||||||| ||| ||||||||||||||||||
Sbjct: 1367 accgccttgtctgtcccaggtatgcactgctgctcgagcatcatctgaaggcacttccct 1308

                                                                        
Query: 479  tgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggagccgcttt 538
            |||||||| ||||||||||||| ||||||||| | |||||| |||||||| |||| ||||
Sbjct: 1307 tgctcctcaattctcagctgcaaacttctttggatctcaagctgttcatgaagcctcttt 1248

                                                            
Query: 539  tgaagttctaactggagacgtaatgcttcggtgagatcaaaattccct 586
            || ||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct: 1247 tggagttctaactggagacgcaatgcctcagtgagatcaaagttccct 1200



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                     
Query: 27   aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
            |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 1794 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 1738
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                            
Query: 332      tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 391
                |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 14705195 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 14705136

                                                                            
Query: 392      gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 451
                | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 14705135 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 14705076

                                                                           
Query: 452      tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 510
                |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 14705075 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 14705017



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 512      acctcaagttgttcatggagccgcttttgaagttctaactggagacgtaatgcttcggtg 571
                |||||||| |||||||| |||| |||||| ||||||||||||||||| ||||| || |||
Sbjct: 14704191 acctcaagctgttcatgaagcctcttttggagttctaactggagacgcaatgcctcagtg 14704132

                             
Query: 572      agatcaaaattcc 584
                |||||||| ||||
Sbjct: 14704131 agatcaaagttcc 14704119



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                         
Query: 27       aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
                |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 14705630 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 14705574



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 461      atctgaaggcacttcccttgctcctc 486
                ||||||||||||||||||||||||||
Sbjct: 14706203 atctgaaggcacttcccttgctcctc 14706178



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 47       agtacatcagtgcgaatttgcttgcgctgccttctg 82
                ||||||||||||| |||||||||| ||||| |||||
Sbjct: 14716278 agtacatcagtgcaaatttgcttgtgctgcgttctg 14716243
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>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0443H10
          Length = 144695

 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                         
Query: 332   tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 391
             |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 29962 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 29903

                                                                         
Query: 392   gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 451
             | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 29902 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 29843

                                                                        
Query: 452   tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 510
             |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 29842 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 29784



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 512   acctcaagttgttcatggagccgcttttgaagttctaactggagacgtaatgcttcggtg 571
             |||||||| |||||||| |||| |||||| ||||||||||||||||| ||||| || |||
Sbjct: 28958 acctcaagctgttcatgaagcctcttttggagttctaactggagacgcaatgcctcagtg 28899

                          
Query: 572   agatcaaaattcc 584
             |||||||| ||||
Sbjct: 28898 agatcaaagttcc 28886



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                      
Query: 27    aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
             |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 30397 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 30341



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 461   atctgaaggcacttcccttgctcctc 486
             ||||||||||||||||||||||||||
Sbjct: 30970 atctgaaggcacttcccttgctcctc 30945



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 47    agtacatcagtgcgaatttgcttgcgctgccttctg 82
             ||||||||||||| |||||||||| ||||| |||||
Sbjct: 41045 agtacatcagtgcaaatttgcttgtgctgcgttctg 41010
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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score =  172 bits (87), Expect = 9e-40
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                         
Query: 332   tgactgttatttggaacatccttcacggtagaagattctggggggtcagaaggtaacttt 391
             |||||||| | ||||||||||||||||| ||||||||||||  | ||||||| |  ||||
Sbjct: 98193 tgactgttctctggaacatccttcacggcagaagattctggaagatcagaagatggcttt 98134

                                                                         
Query: 392   gatccttctgccgacgttgaagcatccagcgccttgtctgcagcaggattgcattgctgc 451
             | ||||||||| || ||||||||||||| |||||||||||   ||||  |||| ||||||
Sbjct: 98133 gttccttctgctgaggttgaagcatccaccgccttgtctgtcccaggtatgcactgctgc 98074

                                                                        
Query: 452   tcgatcataatctgaaggcacttcccttgctcctcgattctcagctgcagacttctttg 510
             |||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 98073 tcgagcatcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttg 98015



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 512   acctcaagttgttcatggagccgcttttgaagttctaactggagacgtaatgcttcggtg 571
             |||||||| |||||||| |||| |||||| ||||||||||||||||| ||||| || |||
Sbjct: 97189 acctcaagctgttcatgaagcctcttttggagttctaactggagacgcaatgcctcagtg 97130

                          
Query: 572   agatcaaaattcc 584
             |||||||| ||||
Sbjct: 97129 agatcaaagttcc 97117



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                      
Query: 27    aagtcaaaccccctca-aaacagtacatcagtgcgaatttgcttgcgctgccttctg 82
             |||||||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 98628 aagtcaaaccacctgacaaagagtacatcagtgcaaatttgcttgtgctgccttctg 98572



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 461   atctgaaggcacttcccttgctcctc 486
             ||||||||||||||||||||||||||
Sbjct: 99201 atctgaaggcacttcccttgctcctc 99176



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 47     agtacatcagtgcgaatttgcttgcgctgccttctg 82
              ||||||||||||| |||||||||| ||||| |||||
Sbjct: 109276 agtacatcagtgcaaatttgcttgtgctgcgttctg 109241
to top
>gb|AY105646.1| Zea mays PCO146542 mRNA sequence
          Length = 645

 Score =  141 bits (71), Expect = 3e-30
 Identities = 153/179 (85%), Gaps = 1/179 (0%)
 Strand = Plus / Minus

                                                                       
Query: 441 tgcattgctgctcgatcataatctg-aaggcacttcccttgctcctcgattctcagctgc 499
           |||| |||||||| | ||| ||||| ||| ||||||||||| ||||||||||| ||||||
Sbjct: 317 tgcactgctgctctagcatcatctggaagacacttcccttgttcctcgattcttagctgc 258

                                                                       
Query: 500 agacttctttgcacctcaagttgttcatggagccgcttttgaagttctaactggagacgt 559
           | ||||||||| | |||||| |||||||| ||||||||||||||||| |||||||| |  
Sbjct: 257 aaacttctttgtatctcaagctgttcatgaagccgcttttgaagttccaactggagccta 198

                                                                      
Query: 560 aatgcttcggtgagatcaaaattccctttaaggtctatagatggcaaatcctcttttga 618
           | |||||| |||||||||||| ||||||| | ||| |||||||| | ||| ||||||||
Sbjct: 197 agtgcttcagtgagatcaaaactccctttcaagtcaatagatggtatatcttcttttga 139



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                            
Query: 326 ccattttgactgttatttggaa-catccttcacggtagaagattctggg 373
           |||||||||| ||| | ||||| | ||||| ||||||||||||||||||
Sbjct: 442 ccattttgacggttttctggaaacttccttgacggtagaagattctggg 394
to top
>gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1) gene, partial cds
          Length = 6188

 Score =  105 bits (53), Expect = 2e-19
 Identities = 159/193 (82%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                        
Query: 319  ggttgttccattttgactgttatttggaacatccttcacggtagaagattc-tggggggt 377
            ||||| ||||||||||||||| | |||||| ||||| |||||||||||||| |||    |
Sbjct: 2156 ggttgatccattttgactgttttctggaacttccttgacggtagaagattcctggaatct 2215

                                                                        
Query: 378  cagaaggtaactttgatccttctgccgacgttgaagcatccagcgccttgtctgcagcag 437
            |||||||| || |  || | ||||| |  |||||||||||| ||||||| |||||  | |
Sbjct: 2216 cagaaggtgacctcaattcatctgcagcggttgaagcatcctgcgccttttctgccccgg 2275

                                                                        
Query: 438  gattgcattgctgctcgatcataatctgaaggcacttcccttgctcctcgattctcagct 497
            |  |||| |||||||| | ||| |||||||| ||||||||||| ||||||||||| ||||
Sbjct: 2276 gtatgcactgctgctctagcatcatctgaagacacttcccttgttcctcgattcttagct 2335

                         
Query: 498  gcagacttctttg 510
            ||| |||||||||
Sbjct: 2336 gcaaacttctttg 2348
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>ref|XM_475467.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 471 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 530
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 499 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 440

                  
Query: 531 gccgctt 537
           | |||||
Sbjct: 439 gtcgctt 433
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>dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H08, full
           insert sequence
          Length = 1823

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 471 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 530
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 824 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 765

                  
Query: 531 gccgctt 537
           | |||||
Sbjct: 764 gtcgctt 758
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>dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B07, full
           insert sequence
          Length = 1535

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 471 acttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatgga 530
           ||||||||||  | || ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 893 acttcccttgtgcttcaattctcagctgcagctgcctttgcacctcaagttgttcatgga 834

                  
Query: 531 gccgctt 537
           | |||||
Sbjct: 833 gtcgctt 827
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>gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80) mRNA, complete
           cds
          Length = 1199

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 64/73 (87%), Gaps = 2/73 (2%)
 Strand = Plus / Minus

                                                                       
Query: 471 acttcccttgctcctcgattctcagctgcagacttcttt-gcacctcaagttgttcatgg 529
           ||||||||||  | |||||||||||||||| ||| |||| | ||||| ||||||||||||
Sbjct: 565 acttcccttgtgcttcgattctcagctgca-actgcttttgaacctcgagttgttcatgg 507

                        
Query: 530 agccgcttttgaa 542
           |||||||| ||||
Sbjct: 506 agccgcttctgaa 494
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>gb|AY019185.1| Oryza sativa microsatellite MRG1510 containing (AT)X28, genomic
           sequence
          Length = 256

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 461 atctgaaggcacttcccttgctcctc 486
           ||||||||||||||||||||||||||
Sbjct: 203 atctgaaggcacttcccttgctcctc 228
to top
>ref|XM_474250.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 472  cttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggag 531
            |||||| |||||||| || |||||||||||| |||| || | ||| || |||||||||||
Sbjct: 1068 cttcccctgctcctctatcctcagctgcagatttctctgaatctctagctgttcatggag 1009
to top
>gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete sequence
          Length = 132875

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 512   acctcaagttgttcatggagccgcttttgaagttctaactggagacgtaatgcttc 567
             ||||||||||||||||| |||||||| || ||||| | ||| || || ||||||||
Sbjct: 28392 acctcaagttgttcatgaagccgcttctggagttccatctgcagccgcaatgcttc 28447
to top
>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence
          Length = 151417

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 512    acctcaagttgttcatggagccgcttttgaagttctaactggagacgtaatgcttc 567
              ||||||||||||||||| |||||||| || ||||| | ||| || || ||||||||
Sbjct: 136123 acctcaagttgttcatgaagccgcttctggagttccatctgcagccgcaatgcttc 136068
to top
>dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I07, full
            insert sequence
          Length = 1959

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 472  cttcccttgctcctcgattctcagctgcagacttctttgcacctcaagttgttcatggag 531
            |||||| |||||||| || |||||||||||| |||| || | ||| || |||||||||||
Sbjct: 1338 cttcccctgctcctctatcctcagctgcagatttctctgaatctctagctgttcatggag 1279
to top
>dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds
          Length = 1120

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 493 cagctgcagacttctttgcacctcaagttgttcatg 528
           |||||||||| ||||||| | |||||||||||||||
Sbjct: 589 cagctgcagatttctttgaatctcaagttgttcatg 554
to top
>dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114F03, full
           insert sequence
          Length = 1423

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 506 ctttgcacctcaagttgttcatggagccgcttttg 540
           ||||||||||| | ||||||||| |||||||||||
Sbjct: 631 ctttgcacctctaattgttcatgtagccgcttttg 597
to top
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 512   acctcaagttgttcatggagccgctt 537
             |||||||||||||||||||| |||||
Sbjct: 78266 acctcaagttgttcatggagtcgctt 78291
to top
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
            region
          Length = 58956

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 512  acctcaagttgttcatggagccgctt 537
            |||||||||||||||||||| |||||
Sbjct: 2622 acctcaagttgttcatggagtcgctt 2597
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 512      acctcaagttgttcatggagccgctt 537
                |||||||||||||||||||| |||||
Sbjct: 24009777 acctcaagttgttcatggagtcgctt 24009802
to top
>gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, complete sequence
          Length = 179927

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    cccctttctcccacagataaa 193
              |||||||||||||||||||||
Sbjct: 127369 cccctttctcccacagataaa 127349
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>dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-628J23, complete
            sequence
          Length = 165097

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 589  aaggtctatagatggcaaatc 609
            |||||||||||||||||||||
Sbjct: 2410 aaggtctatagatggcaaatc 2390
to top
>dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clone:RP11-816L8, complete
              sequence
          Length = 221198

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 589    aaggtctatagatggcaaatc 609
              |||||||||||||||||||||
Sbjct: 221019 aaggtctatagatggcaaatc 220999
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>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence
          Length = 180660

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    tttctcccacagataaaaga 196
              ||||||||||||||||||||
Sbjct: 176249 tttctcccacagataaaaga 176230
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>ref|XM_481816.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 506 ctttgcacctcaagttgttcatggagccgctt 537
           ||||||||||| | ||||||||| ||||||||
Sbjct: 464 ctttgcacctctaattgttcatgtagccgctt 433
to top
>ref|XM_483734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2650

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ttatttggaacatccttcac 357
            ||||||||||||||||||||
Sbjct: 1752 ttatttggaacatccttcac 1733
to top
>ref|XM_866713.1| PREDICTED: Bos taurus similar to Mannosyl-oligosaccharide
           1,2-alpha-mannosidase IC (Processing
           alpha-1,2-mannosidase IC) (Alpha-1,2-mannosidase IC)
           (Mannosidase alpha class 1C member 1) (HMIC), transcript
           variant 1 (LOC615012), mRNA
          Length = 1989

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 527 tggagccgcttttgaagttc 546
           ||||||||||||||||||||
Sbjct: 397 tggagccgcttttgaagttc 378
to top
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete
             sequence
          Length = 190939

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   attttgactgttatttggaa 347
             ||||||||||||||||||||
Sbjct: 64863 attttgactgttatttggaa 64882
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>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete
              sequence
          Length = 190856

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    attttgactgttatttggaa 347
              ||||||||||||||||||||
Sbjct: 129785 attttgactgttatttggaa 129804
to top
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    tttctcccacagataaaaga 196
              ||||||||||||||||||||
Sbjct: 218258 tttctcccacagataaaaga 218239
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>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete
             sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   gagatcaaaattccctttaa 590
             ||||||||||||||||||||
Sbjct: 44442 gagatcaaaattccctttaa 44423
to top
>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence
          Length = 234158

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    atggctagtggggttcacat 264
              ||||||||||||||||||||
Sbjct: 108157 atggctagtggggttcacat 108176
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>gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complete sequence
          Length = 135317

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 569 gtgagatcaaaattcccttt 588
           ||||||||||||||||||||
Sbjct: 361 gtgagatcaaaattcccttt 380
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>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete
           sequence
          Length = 211181

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 571 gagatcaaaattccctttaa 590
           ||||||||||||||||||||
Sbjct: 551 gagatcaaaattccctttaa 532
to top
>emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chromosome 11 Contains the
             5' end of the Sparc gene for secreted acidic cysteine rich
             glycoprotein, the Atox1 gene for ATX1 (antioxidant protein
             1) homolog 1 (yeast), an upregulated during skeletal
             muscle growth 5 (Usmg5) pseudogene, the gene for
             Ras-GTPase-activating protein SH3-domain binding protein
             (G3bp-pending) (C87777), a novel gene, the Glra1 gene for
             glycine receptor, alpha 1 subunit, a novel gene, a
             ubiquitously expressed transcript (Uxt) pseudogene and one
             CpG island, complete sequence
          Length = 204037

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   agtcaaattgaagtcaaatt 243
             ||||||||||||||||||||
Sbjct: 18085 agtcaaattgaagtcaaatt 18066
to top
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 472   cttcccttgctcctcgattctcagctgcagacttct 507
             |||||| |||||||| || |||||||||||| ||||
Sbjct: 58087 cttcccctgctcctctatcctcagctgcagatttct 58122
to top
>emb|AJ635272.1| Prunus avium partial S-RNase gene for ribonuclease S10, exons 2-3,
           isolate 9129-67 ('Napoleon' x Orleans 171), allele S10
          Length = 687

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 gcatggttagatcttcattc 294
           ||||||||||||||||||||
Sbjct: 305 gcatggttagatcttcattc 286
to top
>dbj|AK137125.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430091P20 product:unclassifiable, full insert
           sequence
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 atggctagtggggttcacat 264
           ||||||||||||||||||||
Sbjct: 391 atggctagtggggttcacat 410
to top
>dbj|AK149851.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530023D21 product:glycerol
           phosphate dehydrogenase 2, mitochondrial, full insert
           sequence
          Length = 1625

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  caaaacagtacatcagtgcg 60
           ||||||||||||||||||||
Sbjct: 433 caaaacagtacatcagtgcg 414
to top
>gb|AC154792.2| Mus musculus BAC clone RP23-85E10 from chromosome 13, complete
           sequence
          Length = 201302

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 571 gagatcaaaattccctttaa 590
           ||||||||||||||||||||
Sbjct: 825 gagatcaaaattccctttaa 844
to top
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   atggctagtggggttcacat 264
             ||||||||||||||||||||
Sbjct: 35147 atggctagtggggttcacat 35128
to top
>dbj|AK032044.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330562D18 product:glycerol
           phosphate dehydrogenase 1, mitochondrial, full insert
           sequence
          Length = 2510

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  caaaacagtacatcagtgcg 60
           ||||||||||||||||||||
Sbjct: 412 caaaacagtacatcagtgcg 393
to top
>dbj|AK079336.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:9630028E19 product:inferred:
          glycerol phosphate dehydrogenase 1, mitochondrial, full
          insert sequence
          Length = 3008

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 caaaacagtacatcagtgcg 60
          ||||||||||||||||||||
Sbjct: 75 caaaacagtacatcagtgcg 56
to top
>dbj|AK034353.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330181J03 product:glycerol phosphate
            dehydrogenase 1, mitochondrial, full insert sequence
          Length = 3431

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   caaaacagtacatcagtgcg 60
            ||||||||||||||||||||
Sbjct: 2600 caaaacagtacatcagtgcg 2581
to top
>dbj|AK041972.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630049P17 product:unclassifiable, full
            insert sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  atggctagtggggttcacat 264
            ||||||||||||||||||||
Sbjct: 1089 atggctagtggggttcacat 1108
to top
>dbj|AK011266.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610001M21 product:glycerol
            phosphate dehydrogenase 1, mitochondrial, full insert
            sequence
          Length = 1953

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   caaaacagtacatcagtgcg 60
            ||||||||||||||||||||
Sbjct: 1122 caaaacagtacatcagtgcg 1103
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 472      cttcccttgctcctcgattctcagctgcagacttct 507
                |||||| |||||||| || |||||||||||| ||||
Sbjct: 34007191 cttcccctgctcctctatcctcagctgcagatttct 34007226
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      ttatttggaacatccttcac 357
                ||||||||||||||||||||
Sbjct: 27818813 ttatttggaacatccttcac 27818832
to top
>gb|AC009058.10| Homo sapiens chromosome 16 clone RP11-292B23, complete sequence
          Length = 164844

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   tggttagatcttcattcctt 297
             ||||||||||||||||||||
Sbjct: 15667 tggttagatcttcattcctt 15686
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>gb|AC005075.2|AC005075 Homo sapiens BAC clone CTA-219E16 from 7, complete sequence
          Length = 118334

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   attttgactgttatttggaa 347
             ||||||||||||||||||||
Sbjct: 94121 attttgactgttatttggaa 94140
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>gb|AC009024.6|AC009024 Homo sapiens chromosome 16 clone RP11-112G1, complete sequence
          Length = 158256

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    tggttagatcttcattcctt 297
              ||||||||||||||||||||
Sbjct: 121216 tggttagatcttcattcctt 121235
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>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0439B07
          Length = 89475

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   ttatttggaacatccttcac 357
             ||||||||||||||||||||
Sbjct: 73270 ttatttggaacatccttcac 73289
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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   ttatttggaacatccttcac 357
             ||||||||||||||||||||
Sbjct: 26891 ttatttggaacatccttcac 26910
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>dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D12, full
           insert sequence
          Length = 1345

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 ttatttggaacatccttcac 357
           ||||||||||||||||||||
Sbjct: 447 ttatttggaacatccttcac 428
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>dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A10, full
            insert sequence
          Length = 2650

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ttatttggaacatccttcac 357
            ||||||||||||||||||||
Sbjct: 1752 ttatttggaacatccttcac 1733
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>emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chromosome 17, complete
             sequence
          Length = 193217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tttctcccacagataaaaga 196
             ||||||||||||||||||||
Sbjct: 68942 tttctcccacagataaaaga 68923
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>emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chromosome 2, complete
             sequence
          Length = 104990

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    caaaacagtacatcagtgcg 60
             ||||||||||||||||||||
Sbjct: 90421 caaaacagtacatcagtgcg 90402
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>emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chromosome 2, complete
             sequence
          Length = 198993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   gtgagatcaaaattcccttt 588
             ||||||||||||||||||||
Sbjct: 23266 gtgagatcaaaattcccttt 23247


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,804,570
Number of Sequences: 3902068
Number of extensions: 4804570
Number of successful extensions: 84455
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84253
Number of HSP's gapped (non-prelim): 197
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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