Clone Name | rbasd23f08 |
---|---|
Clone Library Name | barley_pub |
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase Length = 1034 Score = 1183 bits (597), Expect = 0.0 Identities = 613/617 (99%), Gaps = 1/617 (0%) Strand = Plus / Minus Query: 9 tgctttatttattattncctcagcgcaaagttcgtgcaaatggtttgtgctcggcaacaa 68 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 993 tgctttatttattatt-cctcagagcaaagttcgtgcaaatagtttgtgctcggcaacaa 935 Query: 69 taatgaacaaataggtaatgtttacataagagggtagaatactttaaacaacaatgttcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 taatgaacaaataggtaatgtttacataagagggtagaatactttaaacaacaatgttcg 875 Query: 129 caaaaccgggcagagttcggtgcacctgctgggggtcaaaccagcagccattttacatag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 caaaaccgggcagagttcggtgcacctgctgggggtcaaaccagcagccattttacatag 815 Query: 189 aaacggttgtaccatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcgg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 aaacggttgtaccatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcgg 755 Query: 249 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 695 Query: 309 acaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctta 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 acaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctta 635 Query: 369 tcatcatggctcggagaaggtggtaggtagacactatggtcaactagtatctctggctca 428 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 634 tcatcatggctcggagaaggtggcaggtagacactatggtcaactagtatctctggctca 575 Query: 429 tggacatctgcttttgatgcatattcattctttgctgaatgcagtacagattccacatta 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tggacatctgcttttgatgcatattcattctttgctgaatgcagtacagattccacatta 515 Query: 489 tggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 tggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccc 455 Query: 549 tgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattgagg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattgagg 395 Query: 609 agctccttcattgcatc 625 ||||||||||||||||| Sbjct: 394 agctccttcattgcatc 378
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1057 Score = 1176 bits (593), Expect = 0.0 Identities = 612/617 (99%), Gaps = 1/617 (0%) Strand = Plus / Minus Query: 9 tgctttatttattattncctcagcgcaaagttcgtgcaaatggtttgtgctcggcaacaa 68 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1033 tgctttatttattatt-cctcagagcaaagttcgtgcaaatagtttgtgctcggcaacaa 975 Query: 69 taatgaacaaataggtaatgtttacataagagggtagaatactttaaacaacaatgttcg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 taatgaacaaataggtaatgtttacataagagggtagaatactttaaacaacaatgttcg 915 Query: 129 caaaaccgggcagagttcggtgcacctgctgggggtcaaaccagcagccattttacatag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 caaaaccgggcagagttcggtgcacctgctgggggtcaaaccagcagccattttacatag 855 Query: 189 aaacggttgtaccatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcgg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 aaacggttgtaccatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcgg 795 Query: 249 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 735 Query: 309 acaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctta 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 acaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctta 675 Query: 369 tcatcatggctcggagaaggtggtaggtagacactatggtcaactagtatctctggctca 428 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 674 tcatcatggctcggagaaggtggcaggtagacactatggtcaactagtatctctggctca 615 Query: 429 tggacatctgcttttgatgcatattcattctttgctgaatgcagtacagattccacatta 488 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 gggacatctgcttttgatgcatattcattctttgctgaatgcagtacagattccacatta 555 Query: 489 tggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 tggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccc 495 Query: 549 tgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattgagg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattgagg 435 Query: 609 agctccttcattgcatc 625 ||||||||||||||||| Sbjct: 434 agctccttcattgcatc 418
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1012 Score = 1152 bits (581), Expect = 0.0 Identities = 590/593 (99%) Strand = Plus / Minus Query: 33 gcaaagttcgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttta 92 ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 gcaaagttcctgcagatagtttgtgctcggcaacaataatgaacaaataggtaatgttta 951 Query: 93 cataagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgca 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 cataagagggtagaatactttaaacaacaatgttcgcaaaaccgggcagagttcggtgca 891 Query: 153 cctgctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaat 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 cctgctgggggtcaaaccagcagccattttacatagaaacggttgtaccatcaccaaaat 831 Query: 213 acaagcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaag 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 acaagcacgcattatgccgcaacaagaagctttcggatctctggcaatttcttgcggaag 771 Query: 273 acaacttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagcc 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 acaacttcaagccttgcatcaactgtattctcgaacacaatctttccatctcgagaagcc 711 Query: 333 agcacaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggt 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 agcacaacacctccatggcaaatctggccgtgcttatcatcatggctcggagaaggtggt 651 Query: 393 aggtagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatat 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 aggtagacactatggtcaactagtatctctggctcatggacatctgcttttgatgcatat 591 Query: 453 tcattctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcgg 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 tcattctttgctgaatgcagtacagattccacattatggtgatcttctttgcggcagcgg 531 Query: 513 agcagtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacaga 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 agcagtacagctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacaga 471 Query: 573 ttcctgtattcatggtggttgctgctgatattgaggagctccttcattgcatc 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ttcctgtattcatggtggttgctgctgatattgaggagctccttcattgcatc 418
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 963 bits (486), Expect = 0.0 Identities = 587/618 (94%), Gaps = 2/618 (0%) Strand = Plus / Minus Query: 9 tgctttatttattattncctcagcgcaaagttcgtgcaaatggtttgtgctcggcaacaa 68 |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| || | Sbjct: 1043 tgctttatttattatt-cctcagagcaaagttcgtgcaaatagtttgtgctcggcgacga 985 Query: 69 taatgaacaaataggtaatgtttacataagagggtagaatactttaaacaa-caatgttc 127 ||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 984 taatgaacaaataggtagtgtttacataagaggatggaatactttaaacaatcaatgttc 925 Query: 128 gcaaaaccgggcagagttcggtgcacctgctgggggtcaaaccagcagccattttacata 187 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 924 gcaaaaccgggcggagttcgttgcacctgctgggggtcaaaccagcagccattttacata 865 Query: 188 gaaacggttgtaccatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcg 247 ||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 864 gaaacagctgtaccatcaccaaaatacaagtgcgcattatgccgcaacaagaagcttccg 805 Query: 248 gatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaa 307 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 804 gatctctggcaatttcttgcggaaaacaacttcaagccttgcatcaactgtattctcaaa 745 Query: 308 cacaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctt 367 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 cacaatctttccatctcgagaagccagcacaacacctccatggcaaatctggccgtgctc 685 Query: 368 atcatcatggctcggagaaggtggtaggtagacactatggtcaactagtatctctggctc 427 ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 684 atcgccatggctcggagaaggtggcaggtagacactgtggtcaactagtatctcgggctc 625 Query: 428 atggacatctgcttttgatgcatattcattctttgctgaatgcagtacagattccacatt 487 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 624 atggacatctgcttttgatgcatactcattctttgctgaatgcagtacagattccacatt 565 Query: 488 atggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagcc 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 564 atggtgatcttctttgcggcagcggagcagtacagctggctctttcaaccgaagcaggcc 505 Query: 548 ctgaacaacaagttctttcaacagattcctgtattcatggtggttgctgctgatattgag 607 ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| || Sbjct: 504 ctgaacaacgagttcttttaacagattcttgtattcatggtggttgctgctgatattcag 445 Query: 608 gagctccttcattgcatc 625 ||| |||||||||||||| Sbjct: 444 gagttccttcattgcatc 427
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete cds Length = 742 Score = 720 bits (363), Expect = 0.0 Identities = 411/427 (96%) Strand = Plus / Minus Query: 199 accatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcggatctctggca 258 ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 742 accatcaccaaaatacaagtgcgcattatgccgcaacaagaagcttccggatctctggca 683 Query: 259 atttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatctttc 318 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 682 atttcttgcggaaaacaacttcaagccttgcatcaactgtattctcaaacacaatctttc 623 Query: 319 catctcgagaagccagcacaacacctccatggcaaatctggccgtgcttatcatcatggc 378 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 622 catctcgagaagccagcacaacacctccatggcaaatctggccgtgctcatcaccatggc 563 Query: 379 tcggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctg 438 ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 562 tcggagaaggtggcaggtagacactgtggtcaacgagtatctctggctcatggacatctg 503 Query: 439 cttttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatctt 498 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 cttttgatgcatactcattctttgctgaatgcagtacagattccacattatggtgatctt 443 Query: 499 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaa 558 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 442 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaggccctgaacaacga 383 Query: 559 gttctttcaacagattcctgtattcatggtggttgctgctgatattgaggagctccttca 618 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 382 gttcttttaacagattcctgtattcatggtggttgctgctgatattcaggagttccttca 323 Query: 619 ttgcatc 625 ||||||| Sbjct: 322 ttgcatc 316
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence Length = 1233 Score = 305 bits (154), Expect = 9e-80 Identities = 307/358 (85%) Strand = Plus / Minus Query: 236 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 295 ||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 862 aagaagcttccggatctctggcaatttcttgcggaaaacaacttctagtcttgcgtcaag 803 Query: 296 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 355 |||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 802 tgtactctcaaacacaatctttccatctcgagaagccaatacaatacctccagagcaaaa 743 Query: 356 ctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaactag 415 |||||| || ||||| |||||| || | |||||| ||||| ||| ||| ||||| | Sbjct: 742 ctggccatgagcatcatgatggcttggggcaggtggcaggtatacatcatgatcaacaaa 683 Query: 416 tatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagtac 475 ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| || Sbjct: 682 tatctctggttcatggacatctgcttttgatgcatactcatgctttgctgaatgcagcac 623 Query: 476 agattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttcaa 535 |||||||||| ||||||||| || |||||||| ||||||| ||| |||||||||||||| Sbjct: 622 tgattccacatgatggtgatcatccttgcggcaacggagcaatactgctggctctttcaa 563 Query: 536 ccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtggttg 593 || ||||| ||||||| | || |||||||| || ||| ||||||||||||||||| Sbjct: 562 acggagcaaaccctgaatgattaggtctttcaaaaggttcttgtattcatggtggttg 505 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 58 ctcggcaacaataatgaacaaataggta 85 |||||| |||||||||||| |||||||| Sbjct: 1044 ctcggcgacaataatgaaccaataggta 1017
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 240 bits (121), Expect = 5e-60 Identities = 190/213 (89%) Strand = Plus / Minus Query: 381 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 440 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 527 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 468 Query: 441 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 500 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 467 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 408 Query: 501 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 560 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 407 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 348 Query: 561 tctttcaacagattcctgtattcatggtggttg 593 |||||||| || ||| ||||||||||||||||| Sbjct: 347 tctttcaaaaggttcttgtattcatggtggttg 315 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 236 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 295 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 672 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 613 Query: 296 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 561
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full insert sequence Length = 1134 Score = 240 bits (121), Expect = 5e-60 Identities = 190/213 (89%) Strand = Plus / Minus Query: 381 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 440 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 727 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 668 Query: 441 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 500 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 667 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 608 Query: 501 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 560 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 607 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 548 Query: 561 tctttcaacagattcctgtattcatggtggttg 593 |||||||| || ||| ||||||||||||||||| Sbjct: 547 tctttcaaaaggttcttgtattcatggtggttg 515 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 236 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 295 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 872 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 813 Query: 296 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 761 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 41 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 91 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 1073 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 1023
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence Length = 684 Score = 194 bits (98), Expect = 2e-46 Identities = 276/334 (82%), Gaps = 1/334 (0%) Strand = Plus / Minus Query: 236 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 295 ||||||||| |||||||||||||||||||||||||| |||||||| || | || ||| Sbjct: 539 aagaagcttccggatctctggcaatttcttgcggaaaacaacttccagtttggcgccaag 480 Query: 296 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 355 | | |||| ||| ||||||||||||||| |||||||| |||| ||||||| ||||| Sbjct: 479 agcactctcaaacgcaatctttccatctctagaagccaagacaatacctccagagcaaaa 420 Query: 356 ctgg-ccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaacta 414 |||| ||||| ||||| |||||| || | ||| || | | | ||| |||||||| | Sbjct: 419 ctggtccgtgagcatcatgatggcttggggcaggcggcaaggacacatcgtggtcaacaa 360 Query: 415 gtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagta 474 ||||||||| |||||||| ||||||||||||||||| || | ||||||||||||||||| Sbjct: 359 atatctctggttcatggacctctgcttttgatgcatactcgtgctttgctgaatgcagta 300 Query: 475 cagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttca 534 | |||||||||| |||| ||||||| |||||||| ||||||| | || |||||||||||| Sbjct: 299 ctgattccacatgatggggatcttccttgcggcaacggagcaattcacctggctctttca 240 Query: 535 accgaagcaagccctgaacaacaagttctttcaa 568 | || || ||||||||||||| || |||||||| Sbjct: 239 aacggaggaagccctgaacaattagatctttcaa 206
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 381 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 440 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 26808552 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 26808493 Query: 441 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 500 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 26808492 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 26808433 Query: 501 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 550 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 26808432 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 26808383 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 258 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 317 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 26809280 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 26809221 Query: 318 ccatctcgagaagccagcacaacacctcca 347 |||||||||||||||||||||||||||||| Sbjct: 26809220 ccatctcgagaagccagcacaacacctcca 26809191 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 41 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 91 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 26809716 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 26809666 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 547 cctgaacaacaagttctttcaacagattcctgtattcatggtggttg 593 ||||||| || ||||||||||| || ||| ||||||||||||||||| Sbjct: 26808033 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttg 26807987 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 atctttccatctcgagaagccagcacaac 340 |||||||||||||| ||||| |||||||| Sbjct: 6699280 atctttccatctcgggaagctagcacaac 6699308
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 381 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 440 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 44201 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 44142 Query: 441 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 500 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 44141 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 44082 Query: 501 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 550 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 44081 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 44032 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 258 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 317 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 44929 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 44870 Query: 318 ccatctcgagaagccagcacaacacctcca 347 |||||||||||||||||||||||||||||| Sbjct: 44869 ccatctcgagaagccagcacaacacctcca 44840 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 41 cgtgcaaatggtttgtgctcggcaacaataatgaacaaataggtaatgttt 91 ||||| ||| ||| ||||||||| | ||||||||||||||||||| ||||| Sbjct: 45365 cgtgcgaatagttggtgctcggcgataataatgaacaaataggtagtgttt 45315 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 547 cctgaacaacaagttctttcaacagattcctgtattcatggtggttg 593 ||||||| || ||||||||||| || ||| ||||||||||||||||| Sbjct: 43682 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttg 43636
>gb|AF152600.1|AF152600 Zea mays unknown mRNA Length = 497 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 523 ctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtatt 582 ||||||||||||| || |||||||||||||||| || |||||||| || ||| |||||| Sbjct: 497 ctggctctttcaaacggagcaagccctgaacaattagatctttcaaaaggttcttgtatt 438 Query: 583 catggtggttgctgctgatattgaggagctccttcattgcatc 625 ||||||||||| ||||| | |||||| |||||||| ||||| Sbjct: 437 catggtggttgtggctgacaaggaggagttccttcatcgcatc 395
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase Length = 1030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 285 cttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacct 344 |||||||||| || ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct: 713 cttgcatcaagagtgttctcaaacacaattttgccatctcgagaagccagaacgacacct 654 Query: 345 cca 347 ||| Sbjct: 653 cca 651
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2080 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 2021
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 21066 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 21125
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds Length = 931 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 307 acacaatctttccatctcgagaagccagcac 337 |||||||||||||||| |||||||||||||| Sbjct: 584 acacaatctttccatcacgagaagccagcac 554
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 241 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 300 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 789 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 730 Query: 301 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 346 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 729 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 684
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1, complete cds Length = 990 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 241 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 300 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 727 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 668 Query: 301 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 346 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 667 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 622
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E mRNA, partial cds Length = 844 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 246 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 305 ||||||||||| | |||||| ||||| |||||||| | || ||||||| || || || Sbjct: 685 cggatctctggtagtttcttacggaacacaacttccaatctggcatcaagagtgttttca 626 Query: 306 aacacaatctttccatctcgagaagccagcacaacacctcc 346 ||||||| || |||||||||||||||| ||| || ||||| Sbjct: 625 cacacaattttcccatctcgagaagccaacaccactcctcc 585
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds Length = 1057 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein mRNA, complete cds Length = 1023 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 300 ttctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 |||||| ||||||| || ||||| |||||||| | ||||||||||||| Sbjct: 690 ttctcgcacacaattttcccatcacgagaagctaacacaacacctcca 643 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 519 acagctggctctttcaaccgaagcaagccctgaacaa 555 |||| ||| ||||||||||||||||| | |||||||| Sbjct: 471 acagatggttctttcaaccgaagcaaacactgaacaa 435
>gb|DQ124070.1| Coffea arabica clone MN-SSH4-F11 mRNA sequence Length = 499 Score = 48.1 bits (24), Expect = 0.035 Identities = 72/88 (81%) Strand = Plus / Plus Query: 246 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 305 ||||||||||| | ||| | |||||| ||||| || | ||| ||||| | ||| || || Sbjct: 46 cggatctctggaagtttttggcggaacacaacatccaacctagcatcgagtgtgttttca 105 Query: 306 aacacaatctttccatctcgagaagcca 333 ||||||| ||||||||||||||||||| Sbjct: 106 cacacaatttttccatctcgagaagcca 133
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 45750 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 45691
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 73283 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 73224
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 876 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 620 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 561 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 380 tctttcaaccgaagcaaacactgaacaa 353
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 1033 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 471 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 412 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 231 tctttcaaccgaagcaaacactgaacaa 204
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 709 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 650 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 469 tctttcaaccgaagcaaacactgaacaa 442
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E Length = 1070 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 300 ttctcgaacacaatctttccatctcgagaagccagcacaacacc 343 ||||| ||||||||||| ||||||| |||||||| |||||||| Sbjct: 680 ttctcaaacacaatcttgccatctctagaagccataacaacacc 637
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E Length = 949 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 726 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 667 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 486 tctttcaaccgaagcaaacactgaacaa 459
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 309 acaatctttccatctcgagaagccagcacaac 340 ||||||||||||||||| ||||| |||||||| Sbjct: 805 acaatctttccatctcgggaagctagcacaac 774
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 Length = 74406 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 288 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 20072 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 20131
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 297 gtattctcgaacacaatctttccatctcgaga 328 |||||||| |||||||| |||||||||||||| Sbjct: 655 gtattctcaaacacaatttttccatctcgaga 624
>emb|AJ245933.1|BVU245933 Beta vulgaris partial mRNA for V-type H(+)-ATPase subunit E Length = 558 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 498 tctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaaca 557 ||||| |||||||| | || ||||| || |||||||| | |||||| | |||||||||| Sbjct: 389 tctttccggcagcgcaacaacacagcaggttctttcaatctaagcaaactctgaacaaca 330 Query: 558 agttctttcaa 568 || |||||||| Sbjct: 329 agctctttcaa 319
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G64200 (VHA-E3) mRNA, complete cds Length = 714 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 242 ctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaa 294 ||||||||||||||| | ||| ||||||||| |||| || | ||| ||||||| Sbjct: 684 ctttcggatctctggaagtttattgcggaaggcaacctccaacctcgcatcaa 632
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA Length = 693 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 312 atctttccatctcgagaagccagcacaac 340 |||||||||||||| ||||| |||||||| Sbjct: 596 atctttccatctcgggaagctagcacaac 568 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 519 acagctggctctttcaaccgaagcaagccctgaacaa 555 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 389 acagctggctccttcaaacgcagcaagctctgaacaa 353
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence Length = 936 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 307 acacaatctttccatctcgagaagccagcacaacacctcca 347 ||||||| || ||||||||||||||||| || || |||||| Sbjct: 686 acacaattttcccatctcgagaagccagtaccactcctcca 646
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 atctttccatctcgagaagccagcacaac 340 |||||||||||||| ||||| |||||||| Sbjct: 51432 atctttccatctcgggaagctagcacaac 51460
>emb|AJ538752.1|NTA538752 Nicotiana tabacum cDNA-AFLP-fragment BC43-M1-018 Length = 354 Score = 42.1 bits (21), Expect = 2.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 249 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 308 ||||| |||| ||| || ||||| |||||||| | || ||||||| ||| ||||| | Sbjct: 73 atctcgggcagttttttacggaacacaacttccaatctggcatcaagtgtgttctcacaa 132 Query: 309 acaatctttccatctcgagaagcca 333 ||||| || |||||||||||||||| Sbjct: 133 acaattttcccatctcgagaagcca 157
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 312 atctttccatctcgagaagccagcacaac 340 |||||||||||||| ||||| |||||||| Sbjct: 720 atctttccatctcgggaagctagcacaac 692 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 519 acagctggctctttcaaccgaagcaagccctgaacaa 555 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 513 acagctggctccttcaaacgcagcaagctctgaacaa 477
>gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence Length = 37794 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 gtggttgctgctgatattga 606 |||||||||||||||||||| Sbjct: 2353 gtggttgctgctgatattga 2372
>ref|XM_362267.1| Magnaporthe grisea 70-15 hypothetical protein (MG04712.4) partial cds Length = 1746 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 tggtggttgctgctgatattgagg 608 ||||||||| |||||||||||||| Sbjct: 1107 tggtggttgttgctgatattgagg 1084
>ref|XM_460952.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14685g) partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gcttttgatgcatattcatt 457 |||||||||||||||||||| Sbjct: 1808 gcttttgatgcatattcatt 1789
>gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, complete sequence Length = 170533 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 59200 gaacacaatctttccatctc 59181
>gb|AY338875.1| Genista tenera isolate BG11 CYCLOIDEA-like group 1B protein gene, partial cds Length = 1371 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 caataatgaacaaataggta 85 |||||||||||||||||||| Sbjct: 599 caataatgaacaaataggta 618
>gb|AY198279.1| Peronospora alsinearum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 797 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 tggtggttgctgctgatatt 604 |||||||||||||||||||| Sbjct: 58 tggtggttgctgctgatatt 77
>gb|AC146578.2| Pan troglodytes BAC clone CH251-86G3 from Y, complete sequence Length = 188850 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 21831 gaacacaatctttccatctc 21812
>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence Length = 114098 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ttaaacaacaatgttcgcaa 131 |||||||||||||||||||| Sbjct: 79709 ttaaacaacaatgttcgcaa 79690
>gb|AY061695.1| Russula nigricans 217RUF24 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence Length = 693 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 aagccagcacaacacctcca 347 |||||||||||||||||||| Sbjct: 483 aagccagcacaacacctcca 464
>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a serine palmitoyltransferase long chain base subunit 1 (SPTLC1) pseudogene, complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ataagagggtagaatactttaaacaaca 121 |||||||| ||||| ||||||||||||| Sbjct: 39388 ataagaggatagaaaactttaaacaaca 39361
>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains the 3' end of a novel gene (FLJ20276), the 5' end of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a CpG Island, complete sequence Length = 154621 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 tctcgaacacaatctttccatctc 324 |||||| ||||||||||||||||| Sbjct: 19861 tctcgagcacaatctttccatctc 19884
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tctttgctgaatgcagtacagatt 480 |||||||||||||||||| ||||| Sbjct: 2828535 tctttgctgaatgcagtatagatt 2828558
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gcttttgatgcatattcatt 457 |||||||||||||||||||| Sbjct: 1177214 gcttttgatgcatattcatt 1177233
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 atcaccaaaatacaagcacg 221 |||||||||||||||||||| Sbjct: 1522379 atcaccaaaatacaagcacg 1522398
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 13153408 gaacacaatctttccatctc 13153389 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 4746066 gaacacaatctttccatctc 4746085 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 1090748 gaacacaatctttccatctc 1090767
>ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, complete cds Length = 1808 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 gtggttgctgctgatattga 606 |||||||||||||||||||| Sbjct: 390 gtggttgctgctgatattga 371
>emb|BX826920.1|CNS0A38B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 731 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 tctttcaaccgaagcaagccctgaacaa 555 ||||||||||||||||| | |||||||| Sbjct: 166 tctttcaaccgaagcaaacactgaacaa 139
>gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chromosome y, complete sequence Length = 175247 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 116026 gaacacaatctttccatctc 116045
>gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chromosome y, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 19880 gaacacaatctttccatctc 19899
>gb|AC156943.1| Pan troglodytes BAC clone CH251-607J5 from chromosome y, complete sequence Length = 193730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 11954 gaacacaatctttccatctc 11935
>gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661) Length = 1896 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 caatctttccatctcgagaa 329 |||||||||||||||||||| Sbjct: 755 caatctttccatctcgagaa 774
>dbj|AB076987.1| Cytisus racemosus CrCYC2 gene, partial cds Length = 453 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 caataatgaacaaataggta 85 |||||||||||||||||||| Sbjct: 270 caataatgaacaaataggta 289
>emb|AM113962.1| Russula nigricans 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 25S rRNA gene (partial), specimen voucher MC01-511 Length = 629 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 aagccagcacaacacctcca 347 |||||||||||||||||||| Sbjct: 453 aagccagcacaacacctcca 434
>gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromosome y, complete sequence Length = 214370 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gaacacaatctttccatctc 324 |||||||||||||||||||| Sbjct: 148386 gaacacaatctttccatctc 148367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,856,292 Number of Sequences: 3902068 Number of extensions: 5856292 Number of successful extensions: 102796 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102523 Number of HSP's gapped (non-prelim): 267 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)