>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3|
           p110) (eIF3c)
          Length = 935

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
 Frame = -3

Query: 480 ESNERAYEARTGGALEGAPPRRRGDQD-----------SSNMGKWQE 373
           ESNERA EAR GG     PPRRR  QD           +S+ G+WQ+
Sbjct: 815 ESNERATEARLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRWQD 861

>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19|
          Length = 639

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 198 NQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPA 302
           N+T  ET H     HHHSRH    H  H  + RP+
Sbjct: 16  NETDRETNHSRRHRHHHSRHRESKHGRHDRSERPS 50

>IF38_ARATH (O49160) Eukaryotic translation initiation factor 3 subunit 8 (eIF3|
           p110) (eIF3c) (p105)
          Length = 900

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
 Frame = -3

Query: 480 ESNERAYEART-GGALEGAPPRRRGDQD-----SSNMGKWQE 373
           ESNERA E+RT GG L+ +  RR  +QD     S   G WQ+
Sbjct: 795 ESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQD 836

>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein|
           Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2;
           Selenoprotein Se-P1]
          Length = 385

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 204 TGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQS 308
           T  +T  P  E++HH  H   GH  H G+ +P+++
Sbjct: 193 TASKTTEPSEEHNHHKHHDKHGHE-HLGSSKPSEN 226

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +3

Query: 174 HCHPL*TRNQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQSLLCQHSQTSH 338
           H HP         E  H     HHH  H  P H  H G H         H    H
Sbjct: 79  HHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEH 133

>CCL6_MOUSE (P27784) Small inducible cytokine A6 precursor (CCL6) (C10 protein)|
           [Contains: CCL6(22-95); CCL6(23-95)]
          Length = 116

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 61  TSSERCGNNASRQPCSEFI--ADLSGLLISTGPV*VHHASIAIPSRRGTRLVARPS 222
           TSS+ C + A++ PC  FI     SG  I  G        I   SRRGT++ A PS
Sbjct: 46  TSSDCCFSYATQIPCKRFIYYFPTSGGCIKPG--------IIFISRRGTQVCADPS 93

>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG)
          Length = 525

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/80 (27%), Positives = 23/80 (28%)
 Frame = +3

Query: 222 HPGTENHHHSRHGNPGHPCHFGTHRPAQSLLCQHSQTSHRRGDRLVTIQSSPATFPYWTS 401
           H   E H H  H +  HP    THR       QH    H  G                  
Sbjct: 354 HHSHEQHPHGHHPHAHHPHEHDTHR-------QHPHGHHPHG------------------ 388

Query: 402 LDHPCAWVVHPQGHHQSWPH 461
             HP     HP GHH    H
Sbjct: 389 -HHPHGH--HPHGHHPHGHH 405

>GSC_DROME (P54366) Homeobox protein goosecoid|
          Length = 419

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 228 GTENHHHSRHGNPGHPCHFGTHRPAQ 305
           G  +H H  HG+P HP H G H   Q
Sbjct: 247 GHGHHPHHPHGHPHHP-HLGAHHHGQ 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,963,591
Number of Sequences: 219361
Number of extensions: 1353181
Number of successful extensions: 4116
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)