Clone Name	rbasd22p14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	961	0.0
2	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	749	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	749	0.0
4	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	611	e-171
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	565	e-158
6	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	511	e-142
7	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	468	e-128
8	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	337	3e-89
9	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	163	9e-37
10	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	161	3e-36
11	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	161	3e-36
12	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	159	1e-35
13	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	153	8e-34
14	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	153	8e-34
15	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	151	3e-33
16	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	151	3e-33
17	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	151	3e-33
18	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	151	3e-33
19	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	151	3e-33
20	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	151	3e-33
21	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	151	3e-33
22	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	151	3e-33
23	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	151	3e-33
24	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	151	3e-33
25	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	151	3e-33
26	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	151	3e-33
27	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	149	1e-32
28	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	145	2e-31
29	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	145	2e-31
30	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	143	8e-31
31	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	135	2e-28
32	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	135	2e-28
33	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	135	2e-28
34	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	135	2e-28
35	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	135	2e-28
36	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	135	2e-28
37	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	135	2e-28
38	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	135	2e-28
39	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	135	2e-28
40	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	135	2e-28
41	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	135	2e-28
42	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	135	2e-28
43	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	135	2e-28
44	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	135	2e-28
45	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	135	2e-28
46	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	135	2e-28
47	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	135	2e-28
48	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	135	2e-28
49	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	123	7e-25
50	gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas...	121	3e-24
51	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	111	3e-21
52	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	107	4e-20
53	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	103	7e-19
54	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	101	3e-18
55	gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet...	101	3e-18
56	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	96	2e-16
57	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	92	3e-15
58	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	92	3e-15
59	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	92	3e-15
60	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	92	3e-15
61	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	92	3e-15
62	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	3e-15
63	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	92	3e-15
64	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	92	3e-15
65	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	92	3e-15
66	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	92	3e-15
67	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	92	3e-15
68	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	92	3e-15
69	emb|Y10657.1|CLRCAGENE C.littorale rca gene	90	1e-14
70	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	88	4e-14
71	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	88	4e-14
72	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	86	2e-13
73	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	84	6e-13
74	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	84	6e-13
75	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	84	6e-13
76	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	82	3e-12
77	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	1e-11
78	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	78	4e-11
79	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
80	dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
81	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	78	4e-11
82	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	78	4e-11
83	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	78	4e-11
84	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	78	4e-11
85	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	72	2e-09
86	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	64	6e-07
87	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	62	2e-06
88	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	58	4e-05
89	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	58	4e-05
90	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	56	1e-04
91	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	52	0.002
92	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	52	0.002
93	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	48	0.035
94	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	46	0.14
95	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	44	0.55
96	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	0.55
97	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.2
98	gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet...	42	2.2
99	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	42	2.2
100	emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa...	42	2.2
101	gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten...	40	8.6
102	gb|U60105.1| Bos taurus large conductance calcium-activated pota...	40	8.6
103	gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx...	40	8.6
104	gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ...	40	8.6
105	ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001...	40	8.6
106	gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet...	40	8.6
107	gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete...	40	8.6
108	gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp...	40	8.6
109	gb|AF026000.2| Sus scrofa calcium-activated potassium channel al...	40	8.6
110	gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co...	40	8.6
111	ref|NM_174680.2| Bos taurus potassium large conductance calcium-...	40	8.6
112	gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti...	40	8.6
113	dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138	40	8.6
114	gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten...	40	8.6
115	gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN...	40	8.6
116	gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN...	40	8.6
117	gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN...	40	8.6
118	emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ...	40	8.6
119	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.6
120	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.6
121	gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com...	40	8.6
122	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	8.6
123	ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ...	40	8.6
124	ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot...	40	8.6
125	gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ...	40	8.6
126	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	8.6
127	gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone...	40	8.6

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  961 bits (485), Expect = 0.0
 Identities = 515/520 (99%), Gaps = 4/520 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    tatttagagatatattnacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 63
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 1625

                                                                        
Query: 64   -gtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 122
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tgtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565

                                                                        
Query: 123  t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 181
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505

                                                                        
Query: 182  ca-cgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 240
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 1445

                                                                        
Query: 241  gtgt-gtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 299
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gtgttgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 1385

                                                                        
Query: 300  catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 1325

                                                                        
Query: 360  cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 1265

                                                                        
Query: 420  gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 1205

                                                    
Query: 480  cggtagagccgacccacttgcgcacctcatcgtcgtacac 519
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 cggtagagccgacccacttgcgcacctcatcgtcgtacac 1165



 Score =  214 bits (108), Expect = 3e-52
 Identities = 114/116 (98%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 acacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcg 885

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 829

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  749 bits (378), Expect = 0.0
 Identities = 481/513 (93%), Gaps = 7/513 (1%)
 Strand = Plus / Minus

                                                                       
Query: 13  atatattnacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 66
           ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 67  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 126
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 127 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 186
           | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                                                                       
Query: 187 gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 246
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 508

                                                                       
Query: 247 atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 306
           ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 507 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 448

                                                                       
Query: 307 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 388

                                                                       
Query: 367 ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 426
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 387 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 328

                                                                       
Query: 427 ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 486
           |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 327 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 268

                                            
Query: 487 gccgacccacttgcgcacctcatcgtcgtacac 519
           |   ||||||||||||||||| |||||||||||
Sbjct: 267 ggtcacccacttgcgcacctcgtcgtcgtacac 235

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  749 bits (378), Expect = 0.0
 Identities = 481/513 (93%), Gaps = 7/513 (1%)
 Strand = Plus / Minus

                                                                        
Query: 13   atatattnacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 66
            ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 67   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 126
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 127  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 186
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                                                        
Query: 187  gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 246
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358

                                                                        
Query: 247  atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 306
            ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298

                                                                        
Query: 307  cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238

                                                                        
Query: 367  ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 426
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178

                                                                        
Query: 427  ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 486
            |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 1118

                                             
Query: 487  gccgacccacttgcgcacctcatcgtcgtacac 519
            |   ||||||||||||||||| |||||||||||
Sbjct: 1117 ggtcacccacttgcgcacctcgtcgtcgtacac 1085



 Score =  190 bits (96), Expect = 4e-45
 Identities = 111/116 (95%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 864 acacgtgggttctcctccttgttgtacatgcctgggagctgcacattggtgggggcatcg 805

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 804 gcgatgttcatgagggtggcgttcaccatctggttgttgacggtgtactgtgtggt 749

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  611 bits (308), Expect = e-171
 Identities = 308/308 (100%)
 Strand = Plus / Minus

                                                                        
Query: 212  acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 272  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 332  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                                        
Query: 392  agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116

                                                                        
Query: 452  accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 7056

                    
Query: 512  tcgtacac 519
            ||||||||
Sbjct: 7055 tcgtacac 7048



 Score =  422 bits (213), Expect = e-115
 Identities = 215/216 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    atatatttagagatatattnacaaaacatgcccagcaatcgcttggatgcgatgcggact 60
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7738 atatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggact 7679

                                                                        
Query: 61   taggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7678 taggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgc 7619

                                                                        
Query: 121  cgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7618 cgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccg 7559

                                                
Query: 181  gcacgggcaaagtaccttgctgtgctcctttacctc 216
            ||||||||||||||||||||||||||||||||||||
Sbjct: 7558 gcacgggcaaagtaccttgctgtgctcctttacctc 7523



 Score =  214 bits (108), Expect = 3e-52
 Identities = 114/116 (98%)
 Strand = Plus / Minus

                                                                        
Query: 516  acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6686 acacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcg 6627

                                                                    
Query: 576  gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6626 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 6571



 Score =  163 bits (82), Expect = 9e-37
 Identities = 103/110 (93%)
 Strand = Plus / Minus

                                                                        
Query: 519  cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
            |||||||||||||||||||||||||| || |||||||||||||||||||| || || |||
Sbjct: 3556 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 3497

                                                              
Query: 579  atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgt 628
            ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 3496 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgt 3447



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 397
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 398  ttctcgactgtcatctttggctgctcgaa 426
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 487  gccgacccacttgcgcacctcatcgtcgtacac 519
            ||||||||||||||||||||| |||||||||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacac 3780

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  565 bits (285), Expect = e-158
 Identities = 449/500 (89%), Gaps = 9/500 (1%)
 Strand = Plus / Minus

                                                                        
Query: 27   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 80
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 81   -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 139
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 140  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 199
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                                                                        
Query: 200  ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 259
             ||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||
Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356

                                                                        
Query: 260  taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 319
            |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296

                                                                        
Query: 320  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 379
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236

                                                                        
Query: 380  tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 439
            || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176

                                                                        
Query: 440  tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 499
            |||||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||
Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116

                                
Query: 500  cgcacctcatcgtcgtacac 519
            ||||||||| ||||||||||
Sbjct: 1115 cgcacctcaacgtcgtacac 1096



 Score =  182 bits (92), Expect = 9e-43
 Identities = 110/116 (94%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||
Sbjct: 875 acacgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtcg 816

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 815 gcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggt 760

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  511 bits (258), Expect = e-142
 Identities = 258/258 (100%)
 Strand = Plus / Minus

                                                                        
Query: 262  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 322  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                        
Query: 382  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988

                                                                        
Query: 442  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928

                              
Query: 502  cacctcatcgtcgtacac 519
            ||||||||||||||||||
Sbjct: 927  cacctcatcgtcgtacac 910



 Score =  418 bits (211), Expect = e-114
 Identities = 213/214 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    atatatttagagatatattnacaaaacatgcccagcaatcgcttggatgcgatgcggact 60
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 atatatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggact 1319

                                                                        
Query: 61   taggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 taggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgc 1259

                                                                        
Query: 121  cgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 cgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccg 1199

                                              
Query: 181  gcacgggcaaagtaccttgctgtgctcctttacc 214
            ||||||||||||||||||||||||||||||||||
Sbjct: 1198 gcacgggcaaagtaccttgctgtgctcctttacc 1165



 Score =  214 bits (108), Expect = 3e-52
 Identities = 114/116 (98%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 acacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcg 630

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 574

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  468 bits (236), Expect = e-128
 Identities = 269/280 (96%)
 Strand = Plus / Minus

                                                                       
Query: 240 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 299
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249

                                                                       
Query: 300 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189

                                                                       
Query: 360 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129

                                                                       
Query: 420 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 479
           |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69

                                                   
Query: 480 cggtagagccgacccacttgcgcacctcatcgtcgtacac 519
           ||||||||   ||||||||||||||||| |||||||||||
Sbjct: 68  cggtagaggtcacccacttgcgcacctcgtcgtcgtacac 29

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  337 bits (170), Expect = 3e-89
 Identities = 236/258 (91%)
 Strand = Plus / Minus

                                                                        
Query: 262  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 321
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 322  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 381
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                        
Query: 382  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 441
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184

                                                                        
Query: 442  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 501
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124

                              
Query: 502  cacctcatcgtcgtacac 519
            |||||| |||||||||||
Sbjct: 1123 cacctcgtcgtcgtacac 1106



 Score =  176 bits (89), Expect = 6e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 86   aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 145
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 146  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 205
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 206  tcctttacc 214
            |||||||||
Sbjct: 1369 tcctttacc 1361



 Score =  174 bits (88), Expect = 2e-40
 Identities = 109/116 (93%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||||||||||||||||||||| || || ||||||||||||||||| || |||
Sbjct: 885 acacgggggttctcctccttgttgtacatccccggaagctgcacgttggtgggcgcgtcg 826

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 825 gcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggt 770

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  163 bits (82), Expect = 9e-37
 Identities = 103/110 (93%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           |||||||||||||||||||||||||| || |||||||||||||||||||| || || |||
Sbjct: 987 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 928

                                                             
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgt 628
           ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 927 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgt 878



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 397
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 398  ttctcgactgtcatctttggctgctcgaa 426
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 487  gccgacccacttgcgcacctcatcgtcgtacac 519
            ||||||||||||||||||||| |||||||||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacac 1211

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           ||||||||||||| ||||||||||||||| |||||||| ||||||||||||   ||||||
Sbjct: 523 cgggggttctcctgcttgttgtacatgccggggagctggacgttggtggggttgtcggcg 464

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 463 atgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggt 411



 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Minus

                                                                        
Query: 259  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 318
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 319  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 378
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                                                        
Query: 379  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 438
            ||  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 887  gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828

                                       
Query: 439  gtcccgcgagttcaccagcctcttgcc 465
             ||| ||||||||||||||||||||||
Sbjct: 827  ctccagcgagttcaccagcctcttgcc 801



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 105  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 164
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 165  tcggtgcaaccttc 178
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           ||||||||||||| ||||||||||||||| |||||||| ||||||||||||   ||||||
Sbjct: 717 cgggggttctcctgcttgttgtacatgccggggagctggacgttggtggggttgtcggcg 658

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 657 atgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggt 605



 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 266  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 325
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 326  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 385
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 386  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 445
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 446  gagttcaccagcctcttgcc 465
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 105  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 164
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 165  tcggtgcaaccttc 178
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  159 bits (80), Expect = 1e-35
 Identities = 107/116 (92%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||   |||
Sbjct: 868 acacgggggttgtcctccttgttgtacatcccagggagctgcacgttggttgggttgtcg 809

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 808 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 753



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgta 1092

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  153 bits (77), Expect = 8e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           ||||||||||| | ||||||||||||||| |||||||| ||||||||||||   ||||||
Sbjct: 824 cgggggttctcttgcttgttgtacatgccggggagctggacgttggtggggttgtcggcg 765

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 764 atgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggt 712



 Score =  103 bits (52), Expect = 7e-19
 Identities = 166/204 (81%)
 Strand = Plus / Minus

                                                                        
Query: 259  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 318
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249

                                                                        
Query: 319  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 378
            ||||| |||  |||| || |||||||| | ||| || || ||||| ||||| || |||||
Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189

                                                                        
Query: 379  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 438
             |  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129

                                    
Query: 439  gtcccgcgagttcaccagcctctt 462
             ||| |||||||||||||||||||
Sbjct: 1128 ctccagcgagttcaccagcctctt 1105



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 105  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 164
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 165  tcggtgcaaccttc 178
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  153 bits (77), Expect = 8e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           ||||||||||| | ||||||||||||||| |||||||| ||||||||||||   ||||||
Sbjct: 687 cgggggttctcttgcttgttgtacatgccggggagctggacgttggtggggttgtcggcg 628

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 627 atgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggt 575



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 325
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 326  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 385
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 386  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 445
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 446  gagttcaccagcctctt 462
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 105  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 164
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 165  tcggtgcaaccttc 178
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                          
Query: 516    acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
              ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 108880 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 108939

                                                                      
Query: 576    gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
              |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 108940 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 108995



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 95     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 155    ggcattttggtcggtgcaaccttccggcacgggca 189
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                          
Query: 258    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 317
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 318    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 377
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                                          
Query: 378    tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 437
              |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485

                                                   
Query: 438    cgtcccgcgagttcaccagcctcttgccaatgttctc 474
              | |||| ||||||||||||||||||||||||||||||
Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                          
Query: 536    gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 595
              ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 112577 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 112636

                                               
Query: 596    gttcaccatctggttgttgacggtgtactgcgt 628
              |||||||||||||||||| || |||||||||||
Sbjct: 112637 gttcaccatctggttgttcaccgtgtactgcgt 112669



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 113    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 172
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 173    accttccggcacggg 187
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 491    acccacttgcgcacctcatcgtcgta 516
              ||||||||||||||||| ||||||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgta 108564



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 446    gagttcaccagcctcttgccaatgttctc 474
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                         
Query: 516   acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
             ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 30757 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 30816

                                                                     
Query: 576   gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
             |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 30817 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 30872



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 95    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 155   ggcattttggtcggtgcaaccttccggcacgggca 189
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                         
Query: 258   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 317
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 318   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 377
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                                         
Query: 378   tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 437
             |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362

                                                  
Query: 438   cgtcccgcgagttcaccagcctcttgccaatgttctc 474
             | |||| ||||||||||||||||||||||||||||||
Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 536   gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 595
             ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 34454 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 34513

                                              
Query: 596   gttcaccatctggttgttgacggtgtactgcgt 628
             |||||||||||||||||| || |||||||||||
Sbjct: 34514 gttcaccatctggttgttcaccgtgtactgcgt 34546



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 113   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 172
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 173   accttccggcacggg 187
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 491   acccacttgcgcacctcatcgtcgta 516
             ||||||||||||||||| ||||||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgta 30441



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 446   gagttcaccagcctcttgccaatgttctc 474
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 837 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 778

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 777 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 722



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 155  ggcattttggtcggtgcaaccttccggcacgggca 189
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgta 1061

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 832 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 773

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 772 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 717



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 155  ggcattttggtcggtgcaaccttccggcacgggca 189
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 263  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 322
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 323  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 382
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 383  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 442
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                            
Query: 443  cgcgagttcaccagcctcttgccaatgttctc 474
            | ||||||||||||||||||||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgta 1056

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                            
Query: 516      acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
                ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 28304019 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 28304078

                                                                        
Query: 576      gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
                |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 28304079 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 28304134



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 95       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 155      ggcattttggtcggtgcaaccttccggcacgggca 189
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 258      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 317
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 318      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 377
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                                            
Query: 378      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 437
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624

                                                     
Query: 438      cgtcccgcgagttcaccagcctcttgccaatgttctc 474
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 536      gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 595
                ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 28307716 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28307775

                                                 
Query: 596      gttcaccatctggttgttgacggtgtactgcgt 628
                |||||||||||||||||| || |||||||||||
Sbjct: 28307776 gttcaccatctggttgttcaccgtgtactgcgt 28307808



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 113      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 172
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 173      accttccggcacggg 187
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 491      acccacttgcgcacctcatcgtcgta 516
                ||||||||||||||||| ||||||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgta 28303703



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 446      gagttcaccagcctcttgccaatgttctc 474
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 880 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 821

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 820 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 765



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1443 ccctcctcct 1434



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgta 1104

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 831 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 772

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 771 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 716



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgta 1055

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 869 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 810

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 809 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 754



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgta 1093

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 652 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 593

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 592 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 537



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 951  ccctcgagttcaccagcctcttgccaatgttctc 918



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 491 acccacttgcgcacctcatcgtcgta 516
           ||||||||||||||||| ||||||||
Sbjct: 901 acccacttgcgcacctcgtcgtcgta 876

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                            
Query: 516      acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
                ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 28286468 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 28286527

                                                                        
Query: 576      gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
                |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 28286528 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 28286583



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 95       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 155      ggcattttggtcggtgcaaccttccggcacgggca 189
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 258      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 317
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 318      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 377
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                                            
Query: 378      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 437
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073

                                                     
Query: 438      cgtcccgcgagttcaccagcctcttgccaatgttctc 474
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 536      gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 595
                ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 28290165 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28290224

                                                 
Query: 596      gttcaccatctggttgttgacggtgtactgcgt 628
                |||||||||||||||||| || |||||||||||
Sbjct: 28290225 gttcaccatctggttgttcaccgtgtactgcgt 28290257



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 113      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 172
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 173      accttccggcacggg 187
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 491      acccacttgcgcacctcatcgtcgta 516
                ||||||||||||||||| ||||||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgta 28286152



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 446      gagttcaccagcctcttgccaatgttctc 474
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 873 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 814

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 813 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 758



 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 155  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 211
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 212  acctcctcct 221
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 321  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                                        
Query: 381  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173

                                              
Query: 441  cccgcgagttcaccagcctcttgccaatgttctc 474
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgta 1097

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 867 acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 808

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 807 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 752



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 95   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 155  ggcattttggtcggtgcaaccttccggcacgggca 189
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 263  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 322
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 323  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 382
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 383  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 442
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                            
Query: 443  cgcgagttcaccagcctcttgccaatgttctc 474
            | ||||||||||||||||||||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 491  acccacttgcgcacctcatcgtcgta 516
            ||||||||||||||||| ||||||||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgta 1091

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  149 bits (75), Expect = 1e-32
 Identities = 99/107 (92%)
 Strand = Plus / Minus

                                                                       
Query: 522 gggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatg 581
           ||||||||||||||||||||||| || |||| ||||||||||||||| || || ||||||
Sbjct: 834 gggttctcctccttgttgtacatccccgggaactgcacgttggtgggcgcgtccgcgatg 775

                                                          
Query: 582 ttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgt 628
           |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 774 ttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgt 728



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 149/182 (81%)
 Strand = Plus / Minus

                                                                        
Query: 338  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 397
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 398  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 457
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 458  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 517
            | ||||   ||||||||||  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

              
Query: 518  ac 519
            ||
Sbjct: 1062 ac 1061

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  145 bits (73), Expect = 2e-31
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           |||||||| ||||||||||||||||| || |||||||||||||||||||||   ||||||
Sbjct: 443 cgggggttgtcctccttgttgtacatccccgggagctgcacgttggtggggttgtcggcg 384

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 383 atgttcatcagggtggcgttgaccatctggttgttcaccgtgtactgggtggt 331



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 267 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 326
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 327 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 386
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 387 actctagcagcttctcgactgtcatctttggctgctcgaa 426
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  145 bits (73), Expect = 2e-31
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                       
Query: 519 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 578
           |||||||| ||||||||||||||||| || |||||||||||||||||||||   ||||||
Sbjct: 838 cgggggttgtcctccttgttgtacatccccgggagctgcacgttggtggggttgtcggcg 779

                                                                
Query: 579 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 778 atgttcatcagggtggcgttgaccatctggttgttcaccgtgtactgggtggt 726



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 326
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 327  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 386
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 387  actctagcagcttctcgactgtcatctttggctgctcgaa 426
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           |||||||||||||| |||||||||||||| || |||||||| ||||||||||||  ||||
Sbjct: 717 acacgggggttctcttccttgttgtacataccggggagctggacgttggtggggttatcg 658

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||| ||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 657 gcgatgttcatgagggtagcgttaaccatctggttgttgacggtgtattgggtggt 602

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           |||||||||||||| |||||||||||||| || |||||||| ||||||||||||  ||||
Sbjct: 716 acacgggggttctcttccttgttgtacataccggggagctggacgttggtggggttatcg 657

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||| ||||| || || ||||||||||||||||||||||| || |||||
Sbjct: 656 gcgatgttcatgagggtagcattaaccatctggttgttgacggtgtattgggtggt 601

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 387 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 328

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 327 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 272

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 405 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 346

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 345 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 290

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 401 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 342

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 341 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 286

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 407 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 348

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 347 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 292

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 401 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 342

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 341 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 286

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 401 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 342

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 341 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 286

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 395 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 336

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 335 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 280

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 405 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 346

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 345 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 290

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 403 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 344

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 343 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 288

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   |||
Sbjct: 407 acacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcg 348

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 347 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggt 292

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                       
Query: 528 tcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatc 587
           ||||||||||||||||| || |||||||||||||||||||||   |||||||||||||||
Sbjct: 829 tcctccttgttgtacatccccgggagctgcacgttggtggggttgtcggcgatgttcatc 770

                                                       
Query: 588 agggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 769 agggtggcgttgaccatctggttgttcaccgtgtactgggtggt 726



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 267  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 326
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 327  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 386
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 387  actctagcagcttctcgactgtcatctttggctgctcgaa 426
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                       
Query: 261 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 320
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 321 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 380
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                                       
Query: 381 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 440
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386

                                             
Query: 441 cccgcgagttcaccagcctcttgccaatgttctc 474
           ||| ||||||||||||||||||||||||||||||
Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||   |||
Sbjct: 86  acacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcg 27

                                     
Query: 576 gcgatgttcatcagggtggcgttcac 601
           ||||||||||||||||||||||||||
Sbjct: 26  gcgatgttcatcagggtggcgttcac 1



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 491 acccacttgcgcacctcatcgtcgta 516
           ||||||||||||||||| ||||||||
Sbjct: 335 acccacttgcgcacctcgtcgtcgta 310

---

>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 101 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 160
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 161 ttggtcggtgcaaccttccggcacgggca 189
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| |||||||| |||||||||||||| || |||||||| ||||||||||||  ||| 
Sbjct: 902 acacgagggttctcttccttgttgtacataccggggagctgaacgttggtggggttatca 843

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||||||||| || |||||||||||||| |||||||| || ||||| || |||||
Sbjct: 842 gcgatgttcatgagtgtggcgttcaccatttggttgttcactgtgtattgtgtggt 787

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                       
Query: 526 tctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttca 585
           ||||||| || |||||||  || || ||||| |||||||| |||   |||||||||||||
Sbjct: 792 tctcctcgttcttgtacacaccgggcagctggacgttggtcgggttgtcggcgatgttca 733

                                                         
Query: 586 tcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           |||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 732 tcagggtggcgttcaccatctggttgttcacggtgtactgggtggt 687

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase mRNA
          Length = 1853

 Score =  103 bits (52), Expect = 7e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||||||||||||||||||||||||| || || ||||| ||||| || |||  ||| 
Sbjct: 918 acacgggggttctcctccttgttgtacatacctggaagctggacgtttgtcgggttatca 859

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           || |||||||| |||||||| |||||||| ||||||||||| ||||| || |||||
Sbjct: 858 gcaatgttcatgagggtggcattcaccatttggttgttgacagtgtattgggtggt 803



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 295  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 354
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 355  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 414
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 415  tggctgctcgaa 426
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  101 bits (51), Expect = 3e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                       
Query: 573  tcggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1957 tcggcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggt 1899

---

>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 95  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 155 ggcattttggtcggtgcaaccttccggcacgggca 189
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||| |||||| | |||||||||||| |||||||| || || |||||||||   || 
Sbjct: 957 acacgggcgttctcttgcttgttgtacataccagggagttggacattggtggggttgtca 898

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           || |||||||| ||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 897 gcaatgttcatgagggtggcgttaaccatctggttgttcacggtgtattgtgtggt 842

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 999 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 940

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 939 catgagtgttgcgttaaccatctggttgttgacagtgtactg 898

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 999 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 940

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 939 catgagtgttgcgttaaccatctggttgttgacagtgtactg 898

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                        
Query: 524  gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
            |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 1028 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 969

                                                      
Query: 584  catcagggtggcgttcaccatctggttgttgacggtgtactg 625
            ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 968  catgagtgttgcgttaaccatctggttgttgacagtgtactg 927

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
           (At2g39730) mRNA, complete cds
          Length = 1697

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 910 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 851

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 850 catgagtgttgcgttaaccatctggttgttgacagtgtactg 809

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 825 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 766

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 765 catgagtgttgcgttaaccatctggttgttgacagtgtactg 724

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                          
Query: 552    agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 611
              ||||||||||||||||||   |||||||||||||||||||||||| ||||||  ||| ||
Sbjct: 445647 agctgcacgttggtggggttgtcggcgatgttcatcagggtggcgctcaccagttgggtg 445706

                            
Query: 612    ttgacggtgtactg 625
              ||||||||||||||
Sbjct: 445707 ttgacggtgtactg 445720

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 524   gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
             |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 14289 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 14348

                                                       
Query: 584   catcagggtggcgttcaccatctggttgttgacggtgtactg 625
             ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 14349 catgagtgttgcgttaaccatctggttgttgacagtgtactg 14390

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 913 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 854

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 853 catgagtgttgcgttaaccatctggttgttgacagtgtactg 812

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 910 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 851

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 850 catgagtgttgcgttaaccatctggttgttgacagtgtactg 809

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete
           cds
          Length = 1674

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 913 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 854

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 853 catgagtgttgcgttaaccatctggttgttgacagtgtactg 812

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 894 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 835

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 834 catgagtgttgcgttaaccatctggttgttgacagtgtactg 793

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                        
Query: 524  gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
            |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 2994 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 2935

                                                      
Query: 584  catcagggtggcgttcaccatctggttgttgacggtgtactg 625
            ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 2934 catgagtgttgcgttaaccatctggttgttgacagtgtactg 2893

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 537  ttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggcg 596
            ||||||| ||| || |||||||||||||| |||  ||| ||||||||||| ||||| |||
Sbjct: 1710 ttgtacacgccgggcagctgcacgttggtagggttatcagcgatgttcatgagggtagcg 1651

                                         
Query: 597  ttcaccatctggttgttgacggtgtactg 625
            || ||||||||||||||||| ||||||||
Sbjct: 1650 ttgaccatctggttgttgacagtgtactg 1622



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 338  agctgcacacgcttgacattgtcctgctc 366
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||| |||||| |||||||||||||| ||||| |||||||| || || |||  ||| 
Sbjct: 911 acacgggcgttctcttccttgttgtacataccaggaagctgcacatttgtagggttatca 852

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           || |||||||| || ||||| ||||||||||||||||| || ||||| || |||||
Sbjct: 851 gcaatgttcatgagagtggcattcaccatctggttgttcacagtgtattgggtggt 796

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||||| ||| || |||||||||||||| ||||| |||||||| || ||||||  ||| 
Sbjct: 907 acacgggcgttatcttccttgttgtacataccaggaagctgcacatttgtggggttatca 848

                                                                   
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           || |||||||| || ||||| ||||||||||||||||| || ||||| || |||||
Sbjct: 847 gcaatgttcatgagagtggcattcaccatctggttgttcacagtgtattgggtggt 792

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| |||||||| |||||||||||||| ||||||||||| || || || |||   || 
Sbjct: 902 acacgagggttctcttccttgttgtacataccagggagctggacatttgttgggttgtca 843

                                                          
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
           || |||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 842 gcaatgttcatgagggtggcattcaccatctggttgttaacagtgta 796



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 287  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 336
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| |||||||||||||| || || ||||| |||||||| |||  ||| || |||||
Sbjct: 902 gttctcttccttgttgtacattcctggaagctggacgttggttgggttatcagcaatgtt 843

                                                     
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgtactg 625
           ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct: 842 catgagtgttgcgttaaccatctggttgttgacagtgtactg 801

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 524  gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
            |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |||||
Sbjct: 1028 gttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaatgtt 969

                                                      
Query: 584  catcagggtggcgttcaccatctggttgttgacggtgtactg 625
            ||| || || ||||| |||||||| |||||||| ||||||||
Sbjct: 968  catgagtgttgcgttaaccatctgattgttgacagtgtactg 927

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Minus

                                                                       
Query: 528 tcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatc 587
           |||| |||||||||||| ||||||||||| || ||||| |||   || || |||||||| 
Sbjct: 94  tcctgcttgttgtacataccagggagctggacattggttgggttgtcagcaatgttcatg 35

                                             
Query: 588 agggtggcgttcaccatctggttgttgacggtgt 621
           ||||||||||| ||||||||||||||||| ||||
Sbjct: 34  agggtggcgttaaccatctggttgttgacagtgt 1

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 531 tccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagg 590
           |||||||||||||| |||||||| || || |||||||||  ||| || |||||||| || 
Sbjct: 325 tccttgttgtacataccagggagttggacattggtggggttatcagcaatgttcatgagt 266

                                                    
Query: 591 gtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
           ||||| |||||||| ||||||||||| ||||| || |||||
Sbjct: 265 gtggcattcaccatttggttgttgacagtgtattgtgtggt 225

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 284 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 343
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 344 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 399
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           ||||| |||||||| |||||||||||||||||||| ||||| || || || |||   || 
Sbjct: 902 acacgagggttctcttccttgttgtacatgccaggaagctggacatttgttgggttgtca 843

                                                          
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
           || |||||||| |||||||| ||||||||||| ||||| || |||||
Sbjct: 842 gctatgttcatgagggtggcattcaccatctgattgttaacagtgta 796



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 296  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 355
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 356  ttgtcctgctcctggacgagcatg 379
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 95      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 155     ggcattttggtcggtgcaaccttccggcacgggca 189
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319

---

>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 95    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 154
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 155   ggcattttggtcggtgcaaccttccggcacgggca 189
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| | |||||||||||| || |||||||| || || || |||  ||| ||||||||
Sbjct: 216 gttctcttgcttgttgtacataccggggagctggacatttgtcgggttatcagcgatgtt 157

                                                  
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgta 622
           ||| || ||||| |||||||||||||||||||| |||||
Sbjct: 156 catgagagtggcattcaccatctggttgttgacagtgta 118

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| | |||||||||||| || |||||||| ||||| || |||  ||| || |||||
Sbjct: 860 gttctcttgcttgttgtacataccggggagctggacgtttgtcgggttatcagcaatgtt 801

                                                  
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgta 622
           ||| || ||||| |||||||||||||||||||| |||||
Sbjct: 800 catgagagtggcattcaccatctggttgttgacagtgta 762

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 516 acacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcg 575
           |||||||||||||||||||||| |||||| |||||||| || || ||||| |||  ||| 
Sbjct: 332 acacgggggttctcctccttgtcgtacattccagggagttggacattggttgggttatca 273

                                                          
Query: 576 gcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
           || |||||||| || || || || |||||||| |||||||| |||||
Sbjct: 272 gcaatgttcatgagtgtagcattaaccatctgattgttgactgtgta 226

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 524 gttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgtt 583
           |||||| | |||||||||||| || |||||||| || || || |||   || || |||||
Sbjct: 871 gttctcttgcttgttgtacataccggggagctggacatttgttgggttgtcagcaatgtt 812

                                                  
Query: 584 catcagggtggcgttcaccatctggttgttgacggtgta 622
           ||| |||||||| ||||||||||||||||||||||||||
Sbjct: 811 catgagggtggcattcaccatctggttgttgacggtgta 773

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 528  tcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatc 587
            |||| |||||||||||| |||||||| || || ||||| |||   || || |||||||| 
Sbjct: 2687 tcctgcttgttgtacataccagggagttggacattggttgggttgtcagcaatgttcatg 2628

                                                        
Query: 588  agggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
            || |||||||| |||||||||||||| |||||||| || |||||
Sbjct: 2627 agtgtggcgttaaccatctggttgtttacggtgtattgggtggt 2584

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 528  tcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatc 587
            |||| |||||||||||| |||||||| || || ||||| |||   || || |||||||  
Sbjct: 1059 tcctgcttgttgtacataccagggagttggacattggttgggttgtcagcaatgttcagg 1000

                                                        
Query: 588  agggtggcgttcaccatctggttgttgacggtgtactgcgtggt 631
            || |||||||| |||||||||||||| |||||||| || |||||
Sbjct: 999  agtgtggcgttaaccatctggttgtttacggtgtattgggtggt 956

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 531 tccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagg 590
           |||||||||||||| ||||| | ||| || || || |||  ||| || |||||||| |||
Sbjct: 581 tccttgttgtacattccaggcaactgaacattcgttgggttatcagcaatgttcatgagg 522

                                              
Query: 591 gtggcgttcaccatctggttgttgacggtgtactg 625
           ||||| || |||||||||||||| || ||||||||
Sbjct: 521 gtggcattgaccatctggttgttcacagtgtactg 487

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                       
Query: 514 gtacacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcat 573
           ||||||| || ||||| |||||||||||||| || |||||||| || ||||| ||    |
Sbjct: 747 gtacacgtggattctcttccttgttgtacatacccgggagctgaacattggttggattgt 688

                                                            
Query: 574 cggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
           | || |||||||| ||||| || |||||||| |||||||| || |||||
Sbjct: 687 cagcaatgttcatgagggtagcattcaccatttggttgttcacagtgta 639

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                       
Query: 514 gtacacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcat 573
           ||||||| || ||||| |||||||||||||| || |||||||| || ||||| ||    |
Sbjct: 920 gtacacgtggattctcttccttgttgtacatacccgggagctgaacattggttggattgt 861

                                                            
Query: 574 cggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
           | || |||||||| ||||| || |||||||| |||||||| || |||||
Sbjct: 860 cagcaatgttcatgagggtagcattcaccatttggttgttcacagtgta 812

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 525 ttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttc 584
           |||||||  ||||||||||| ||||||||||| || || || ||   ||| || ||||||
Sbjct: 188 ttctcctgtttgttgtacataccagggagctgaacattagttggattatcagcaatgttc 129

                                           
Query: 585 atcagggtggcgttcaccatctggttgttgac 616
           || ||||| || |||||||||||||| |||||
Sbjct: 128 ataagggttgcattcaccatctggttattgac 97

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 533 cttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggt 592
           |||||||||||| || |||||||| || || || |||   || || |||||||| || ||
Sbjct: 121 cttgttgtacataccggggagctggacatttgtcgggttgtcagcaatgttcatgagagt 62

                                         
Query: 593 ggcgttcaccatctggttgttgacggtgta 622
           ||| |||||||| ||||||||||| |||||
Sbjct: 61  ggcattcaccatttggttgttgacagtgta 32

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 533 cttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggt 592
           |||||||||||| || |||||||| || || || |||   || || |||||||| || ||
Sbjct: 881 cttgttgtacataccggggagctggacatttgtcgggttgtcagcaatgttcatgagagt 822

                                         
Query: 593 ggcgttcaccatctggttgttgacggtgta 622
           ||| |||||||| ||||||||||| |||||
Sbjct: 821 ggcattcaccatttggttgttgacagtgta 792

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 579  atgttcatcagggtggcgttcaccatctggttgttgacggtgta 622
            |||||||| ||||| || || ||||||||||||||||| |||||
Sbjct: 7054 atgttcatgagggttgcatttaccatctggttgttgactgtgta 7097

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                       
Query: 531 tccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagg 590
           |||||||| |||||||| || |||||||| ||||| |||   || || |||||||| || 
Sbjct: 898 tccttgttatacatgcctggtagctgcacattggttgggttgtcagcaatgttcataaga 839

                                              
Query: 591 gtggcgttcaccatctggttgttgacggtgtactg 625
           || || || ||||||||||| || || ||||||||
Sbjct: 838 gtagcatttaccatctggttattcactgtgtactg 804

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                       
Query: 533 cttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggt 592
           |||||||||||| || ||||| || || || || |||  ||| || |||||||| || ||
Sbjct: 898 cttgttgtacataccggggagttggacattcgtcgggttatcagcaatgttcatgagtgt 839

                                         
Query: 593 ggcgttcaccatctggttgttgacggtgta 622
            || |||||||| ||||||||||| |||||
Sbjct: 838 agcattcaccatttggttgttgacagtgta 809

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 300   catcacccagagctgcctggct 321
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 71      aaacatcagatattaaaagtg 91
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420

---

>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   atgcagcaagagatggtgggt 242
             |||||||||||||||||||||
Sbjct: 63530 atgcagcaagagatggtgggt 63550

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 71      aaacatcagatattaaaagtg 91
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365

---

>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     aaacatcagatattaaaagtg 91
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423

---

>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cctttacctcctcctatgca 226
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378

---

>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565

---

>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  cctttacctcctcctatgca 226
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656

---

>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cctttacctcctcctatgca 226
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964

---

>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 331 gtcagcaagctgcacacgct 350
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223

---

>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     tcagatattaaaagtggcat 95
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077

---

>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     tcagatattaaaagtggcat 95
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583

---

>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tcagatattaaaagtggcat 95
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911

---

>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619

---

>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttgacattgtcctgctcctg 369
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419

---

>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935

---

>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 104  ggtgtaaaggcagctgccgtcgtcgctc 131
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133

---

>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    aaacatgcccagcaatcgcttgga 47
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715

---

>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cctttacctcctcctatgca 226
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681

---

>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659

---

>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026

---

>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935

---

>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tggcatgcttaaaaggtgta 109
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  ggcatcggcgatgttcatca 588
            ||||||||||||||||||||
Sbjct: 1877 ggcatcggcgatgttcatca 1896

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  ggcatcggcgatgttcatca 588
            ||||||||||||||||||||
Sbjct: 1878 ggcatcggcgatgttcatca 1897

---

>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    ttgacattgtcctgctcctg 369
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   ggcatcggcgatgttcatca 588
             ||||||||||||||||||||
Sbjct: 34337 ggcatcggcgatgttcatca 34318

---

>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  catcacccagagctgcctggctca 323
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619

---

>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 196 cttgctgtgctcctttacctcctc 219
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625

---

>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   cctttacctcctcctatgca 226
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  ggcatcggcgatgttcatca 588
            ||||||||||||||||||||
Sbjct: 1863 ggcatcggcgatgttcatca 1882

---

>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     atcagatattaaaagtggcatgct 98
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,861
Number of Sequences: 3902068
Number of extensions: 4349861
Number of successful extensions: 88108
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87653
Number of HSP's gapped (non-prelim): 397
length of query: 631
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 608
effective length of database: 17,143,297,704
effective search space: 10423125004032
effective search space used: 10423125004032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---