ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22p11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 ... 33 0.13
2TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member ... 33 0.13
3TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member ... 33 0.13
4TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member ... 33 0.13
5EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa en... 33 0.23
6TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4 31 0.66
7DUET_HUMAN (Q9Y2A5) Serine/threonine-protein kinase Duet (EC 2.7... 28 4.3
8TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member ... 28 5.6
9TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member ... 28 5.6
10G6PD_BOSIN (Q7YS37) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 27 9.5

>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 347 SLIMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           ++IM     L TG IGF   F+FV  ++S VK+D
Sbjct: 630 TMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663



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>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 347 SLIMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           ++IM     L TG IGF   F+FV  ++S VK+D
Sbjct: 630 TMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663



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>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor|
           (p76)
          Length = 663

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 347 SLIMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           ++IM     L TG IGF   F+FV  ++S VK+D
Sbjct: 630 TMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663



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>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 662

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 347 SLIMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           ++IM     L TG IGF   F+FV  ++S VK+D
Sbjct: 629 TMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662



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>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane|
           protein) (Pheromone alpha-factor transporter) (Acidic 24
           kDa late endocytic intermediate component)
          Length = 667

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -3

Query: 347 SLIMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           S +++    L TG+IGF+ S  FV  ++SS+K+D
Sbjct: 634 SSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667



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>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 341 IMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           +M  +  L TG IGF  ++ FV  ++++VKID
Sbjct: 594 LMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625



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>DUET_HUMAN (Q9Y2A5) Serine/threonine-protein kinase Duet (EC 2.7.11.1)|
           (Serine/threonine kinase with Dbl- and pleckstrin
           homology domain)
          Length = 1289

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 7   CCYKCAEEAXHNTSPKRGKSNTAGALQT--CLRSXH 108
           CC+ C +   H++S   GKS +   LQ    L S H
Sbjct: 23  CCFPCRDAYSHSSSENGGKSESVANLQAQPSLNSIH 58



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>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -3

Query: 341 IMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           + + A+ +  GAIG++ +  FV  ++++VKID
Sbjct: 556 VFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587



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>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -3

Query: 341 IMAXAIXLSTGAIGFLLSFYFVHYLFSSVKID 246
           + + A+ +  GAIG++ +  FV  ++++VKID
Sbjct: 558 VFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589



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>G6PD_BOSIN (Q7YS37) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 514

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 23  QRKQXIILVQNEARVTRPEHYKHV*EVNIXAGVTVLSHVNRHMFPIFQFDNYLCLCF 193
           Q    I  + +E ++ R +HY       +   + VL  VNR + PI+  DN  C+ F
Sbjct: 181 QLSNHIASLFHEDQIYRIDHYLGK---EVVQNLMVLRFVNRILGPIWNRDNIACMSF 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,030,063
Number of Sequences: 219361
Number of extensions: 486949
Number of successful extensions: 901
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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