>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 210 acccgcggcgcgcggggcaggcacgtcgtggcgttcacgcacgccggcagctccatgccc 269
           |||| |||||| || |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 677 accctcggcgcccgcggcaggcacgtcgtcgcgttcacgcacgccggcagctccatcccc 618

                     
Query: 270 tccagcttct 279
           || |||||||
Sbjct: 617 tctagcttct 608

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                           
Query: 210     acccgcggcgcgcggggcaggcacgtcgtggcgttcacgcacgccggcagctccatgccc 269
               |||| |||||| || |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 7184802 accctcggcgcccgcggcaggcacgtcgtcgcgttcacgcacgccggcagctccatcccc 7184861

                
Query: 270     t 270
               |
Sbjct: 7184862 t 7184862

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 210   acccgcggcgcgcggggcaggcacgtcgtggcgttcacgcacgccggcagctccatgccc 269
             |||| |||||| || |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 79450 accctcggcgcccgcggcaggcacgtcgtcgcgttcacgcacgccggcagctccatcccc 79509

              
Query: 270   t 270
             |
Sbjct: 79510 t 79510

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 107     gtccgcggccgcgccgtcgtcc 128
               ||||||||||||||||||||||
Sbjct: 1696642 gtccgcggccgcgccgtcgtcc 1696663

>gb|BC095614.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5, mRNA
           (cDNA clone MGC:111955 IMAGE:7248997), complete cds
          Length = 541

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 77  tggacaagtggctgctggctca 98
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>ref|NM_001020633.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5
           (ndufs5), mRNA
          Length = 541

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 77  tggacaagtggctgctggctca 98
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 107     gtccgcggccgcgccgtcgtcc 128
               ||||||||||||||||||||||
Sbjct: 3031532 gtccgcggccgcgccgtcgtcc 3031553

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 107     gtccgcggccgcgccgtcgtcc 128
               ||||||||||||||||||||||
Sbjct: 2180357 gtccgcggccgcgccgtcgtcc 2180378

>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19,
             complete sequence
          Length = 118451

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 77    tggacaagtggctgctggctca 98
             ||||||||||||||||||||||
Sbjct: 57921 tggacaagtggctgctggctca 57900

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 251     cgccggcagctccatgccctccagc 275
               ||||||||| |||||||||||||||
Sbjct: 1926808 cgccggcagatccatgccctccagc 1926832

>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence
          Length = 235930

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gctgcagcccttgctgactc 204
              ||||||||||||||||||||
Sbjct: 160929 gctgcagcccttgctgactc 160948

>ref|XM_534485.2| PREDICTED: Canis familiaris similar to thrombospondin type I
            domain-containing 1 isoform 1 (LOC477293), mRNA
          Length = 2824

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  tgtccgcggccgcgccgtcg 125
            ||||||||||||||||||||
Sbjct: 1777 tgtccgcggccgcgccgtcg 1758

>emb|BX063779.1|CNS09LDJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC45DC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 930

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 150 agcagcggcacgaacttgagcatg 173
           |||||||| |||||||||||||||
Sbjct: 646 agcagcggaacgaacttgagcatg 669

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cgcgccgtcgtccatctcct 135
               ||||||||||||||||||||
Sbjct: 1294753 cgcgccgtcgtccatctcct 1294772

>gb|AE012007.1| Xanthomonas axonopodis pv. citri str. 306,  section 385 of 469 of
           the complete genome
          Length = 10826

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 ccgcggcgcgcggggcaggc 231
           ||||||||||||||||||||
Sbjct: 969 ccgcggcgcgcggggcaggc 950

>gb|AE012392.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 300
            of 460 of the complete genome
          Length = 10825

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  cgcgccgtcgtccatctcct 135
            ||||||||||||||||||||
Sbjct: 5403 cgcgccgtcgtccatctcct 5384

>dbj|AK147751.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
           clone:G270023O13 product:ring finger protein 127, full
           insert sequence
          Length = 2225

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 ccgcggcgcgcggggcaggc 231
           ||||||||||||||||||||
Sbjct: 811 ccgcggcgcgcggggcaggc 830

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cgcgccgtcgtccatctcct 135
               ||||||||||||||||||||
Sbjct: 1603085 cgcgccgtcgtccatctcct 1603104

>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete
             sequence
          Length = 163057

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   cttggacggcgctgcagccc 194
             ||||||||||||||||||||
Sbjct: 28833 cttggacggcgctgcagccc 28814

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cgcgccgtcgtccatctcct 135
               ||||||||||||||||||||
Sbjct: 1318531 cgcgccgtcgtccatctcct 1318550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,961,385
Number of Sequences: 3902068
Number of extensions: 1961385
Number of successful extensions: 38461
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38018
Number of HSP's gapped (non-prelim): 443
length of query: 302
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 280
effective length of database: 17,147,199,772
effective search space: 4801215936160
effective search space used: 4801215936160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)