Clone Name | rbasd23e12 |
---|---|
Clone Library Name | barley_pub |
>GP157_HUMAN (Q5UAW9) Probable G-protein coupled receptor 157| Length = 335 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 681 CNCCCTSSPRTHNPREVPPSTAPTCKDGSHRNARDGSKRPS 559 C CCC+S P T +P P + AP+ S + + PS Sbjct: 294 CCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPS 334
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/87 (28%), Positives = 32/87 (36%) Frame = -3 Query: 687 PACNCCCTSSPRTHNPREVPPSTAPTCKDGSHRNARDGSKRPSRGVA*AHQEILPPVVRS 508 P S+P P VP STAP G N DG P+ PPVV S Sbjct: 292 PPLPATSASAPAPLVPATVPSSTAPNAAAGGAPNLADGFTSPT-----------PPVVSS 340 Query: 507 SPCRRSVHRDAEEVRQHAQNRDGVHHS 427 +P V+ ++ NR H+ Sbjct: 341 TP------PTGHPVQFYSMNRPASRHT 361
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 31.6 bits (70), Expect = 2.4 Identities = 39/143 (27%), Positives = 51/143 (35%), Gaps = 5/143 (3%) Frame = -1 Query: 623 PQPLPAKMVAIAMLGMAANVPLGVWREHTKKFSPQWFAAVHAAVPFIAMLRKSVNMPRTA 444 P P+ A A A+ AA + T + A AA P A TA Sbjct: 884 PAPVAAAATAAAITATAATIT-------TTMVAAAPVAVAAAAAPAAAAAPSPATAAATA 936 Query: 443 MVFTIAASILGQ-----TIGSRAERIRLKTLAAKGTAGPAATVTVMYPDKSGSCSDAEGK 279 + AA+ GQ ++ S A AA PAA V P + A + Sbjct: 937 AAVSPAAA--GQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQ 994 Query: 278 AWDPLALKIPGSANAGAPAPTPS 210 A P + P SA A AP P P+ Sbjct: 995 ASAPAQTQAPTSAPAVAPTPAPT 1017
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 8/91 (8%) Frame = -1 Query: 299 CSDAEGKAWD----PLALKIPGSANAGAPAPTPSMCF*PWNLAAPGTDFYLSCM*LACLP 132 CS A +W P + P + AP PS+ + P + C AC P Sbjct: 9 CSSAYSDSWQVDDCPESCCEPPCSAPSCCAPAPSLSL----VCTPVSCVSSPCCQAACEP 64 Query: 131 LGETSGIRCYSTTSCCE--TCRG--CVVSPC 51 SG T SCC+ +C+ C SPC Sbjct: 65 SACQSGCTSSCTPSCCQQSSCQPACCTSSPC 95
>ZN533_BRARE (Q6PBT9) Zinc finger protein 533| Length = 492 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -1 Query: 374 KTLAAKGTAGPAATVTVMYPDK-SGSCSDAEGKAWDPLAL-KIPGSANAGAPAP 219 KT+ + T T T + SCSD K+ +PLA K+P S A PAP Sbjct: 192 KTITSTSTNTTTTTTTTSSCTAVTASCSDQTEKSTEPLAAHKVPASPQAFVPAP 245
>T4S5_HUMAN (O14894) Transmembrane 4 L6 family member 5 (Tetraspan| transmembrane protein L6H) Length = 197 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/71 (25%), Positives = 29/71 (40%) Frame = +1 Query: 409 CPRMEAAMVNTIAVLGMLTDFLSIAMNGTAAWTAANHWGENFLVCSRHTPRGTFAAIPSI 588 C R + T+ ++ ++ + L + NG +WT NH + G P I Sbjct: 6 CARCVGLSLITLCLVCIVANALLLVPNGETSWTNTNHLSLQVWLMGGFIGGGLMVLCPGI 65 Query: 589 AMATIFAGRGC 621 A A G+GC Sbjct: 66 A-AVRAGGKGC 75
>ITB4_HUMAN (P16144) Integrin beta-4 precursor (GP150) (CD104 antigen)| Length = 1822 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = -1 Query: 233 GAPAPTPSMCF*PWNLAAPGTDFYLSCM*LACLPLGETSGIRCYSTTSCCETCRGCVVSP 54 GAP P ++ PG+ ++L + L LPL + C+ +CC+ C + P Sbjct: 690 GAPGPNSTVLVHKKKDCPPGSFWWLIPLLLLLLPLLALLLLLCWKYCACCKAC--LALLP 747 Query: 53 CICN 42 C CN Sbjct: 748 C-CN 750
>MB11_ARATH (Q9SAV1) Myrosinase-binding protein-like At1g52030 (MBP)| Length = 642 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -1 Query: 311 KSGSCSDAEGKAWDPLALKIPGSANAGAPAPTPS 210 +SG DA G + PL P A A APAP P+ Sbjct: 277 RSGEAIDALGAHFAPLPAPTPAPAPAPAPAPAPA 310
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 30.0 bits (66), Expect = 7.0 Identities = 30/129 (23%), Positives = 46/129 (35%) Frame = -1 Query: 455 PRTAMVFTIAASILGQTIGSRAERIRLKTLAAKGTAGPAATVTVMYPDKSGSCSDAEGKA 276 P A +AA + G +G A + G++ + +G+ S A + Sbjct: 12 PTAAAAAAVAAGV-GGGVGGGASGVATANTNTTGSSSTGGS------SSAGTTSSANTSS 64 Query: 275 WDPLALKIPGSANAGAPAPTPSMCF*PWNLAAPGTDFYLSCM*LACLPLGETSGIRCYST 96 +L G +AG A S+ P Y+ L C G + C S Sbjct: 65 SSSSSLSSAGGGDAGMSADLTSL------FECPVCFDYVLPPILQCSS-GHLVCVSCRSK 117 Query: 95 TSCCETCRG 69 +CC TCRG Sbjct: 118 LTCCPTCRG 126
>PUR4_HUMAN (O15067) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1338 Score = 30.0 bits (66), Expect = 7.0 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 Query: 382 MRSALDPMVCPRMEAAMVNTIAVLGMLTDFLSIAMNGTAAWTA 510 ++S LDP V R+ A T V ++TD + +G W A Sbjct: 730 VKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAA 772
>AGI2_WHEAT (P02876) Agglutinin isolectin 2 precursor (WGA2) (Isolectin D)| Length = 213 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Frame = -1 Query: 248 GSANAGAPAPTPSMCF*PWNLAAPGTDFYLS-CM*LACL---PLGETSGIRCYSTTSCCE 81 GS + G P ++C W G++F C AC P G+ +G R + CC Sbjct: 117 GSQSGGKLCPN-NLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCS 175 Query: 80 TCRGCVVSPCIC 45 C + P C Sbjct: 176 KWGSCGIGPGYC 187
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 29.6 bits (65), Expect = 9.1 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 1/100 (1%) Frame = -1 Query: 365 AAKGTAGPAA-TVTVMYPDKSGSCSDAEGKAWDPLALKIPGSANAGAPAPTPSMCF*PWN 189 A G G A T T +G+ S A + +L G +AG A S+ Sbjct: 17 AGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSL------ 70 Query: 188 LAAPGTDFYLSCM*LACLPLGETSGIRCYSTTSCCETCRG 69 P Y+ L C G + C S +CC TCRG Sbjct: 71 FECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRG 109
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 29.6 bits (65), Expect = 9.1 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 1/100 (1%) Frame = -1 Query: 365 AAKGTAGPAA-TVTVMYPDKSGSCSDAEGKAWDPLALKIPGSANAGAPAPTPSMCF*PWN 189 A G G A T T +G+ S A + +L G +AG A S+ Sbjct: 17 AGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSL------ 70 Query: 188 LAAPGTDFYLSCM*LACLPLGETSGIRCYSTTSCCETCRG 69 P Y+ L C G + C S +CC TCRG Sbjct: 71 FECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRG 109
>NEO1_HUMAN (Q92859) Neogenin precursor| Length = 1461 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +2 Query: 29 ISASDYRCMD*QHNHDKFHSRTWYYSTLFHLSHPGAGKPITYTINRNQYPGRLNST--VR 202 ISA +D H+H FHS + HL HPG+ PI +++ + R NST VR Sbjct: 1250 ISAHPIHSLDNPHHH--FHSSSLASPARSHLYHPGSPWPIGTSMSLSD---RANSTESVR 1304 Query: 203 ST 208 +T Sbjct: 1305 NT 1306 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,071,935 Number of Sequences: 219361 Number of extensions: 2132218 Number of successful extensions: 6713 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 6169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6685 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)