Clone Information

BLAST Search Result

Clone Name	rbasd22p04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TAF5_SCHPO (O13282) Transcription initiation factor TFIID subuni...	44	1e-04
2	YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466	42	5e-04
3	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	40	0.003
4	KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homo...	38	0.009
5	GBB2_DROME (P29829) Guanine nucleotide-binding protein beta subu...	37	0.015
6	CWF17_SCHPO (O94620) Cell cycle control protein cwf17	37	0.015
7	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	37	0.025
8	TAF5_YEAST (P38129) Transcription initiation factor TFIID subuni...	36	0.032
9	KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Kat...	36	0.042
10	WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 ...	35	0.072
11	KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Kat...	34	0.16
12	KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Kat...	34	0.16
13	PRW1_SCHPO (O14021) RbAp48-related WD40-repeat protein prw1	33	0.21
14	KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Kat...	33	0.36
15	HIRA_DROME (O17468) HIRA protein homolog (dHIRA)	33	0.36
16	HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (...	33	0.36
17	REC14_SCHPO (Q09150) Meiotic recombination protein rec14	32	0.47
18	WDR20_MOUSE (Q9D5R2) WD-repeat protein 20	32	0.61
19	SC6A6_BOVIN (Q9MZ34) Sodium- and chloride-dependent taurine tran...	32	0.61
20	HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (...	32	0.61
21	COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co...	32	0.61
22	KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog	32	0.80
23	COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (...	31	1.0
24	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	31	1.0
25	GBB_CRYPA (O14435) Guanine nucleotide-binding protein beta subunit	31	1.0
26	SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 p...	31	1.0
27	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	31	1.0
28	GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subu...	31	1.4
29	GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subu...	31	1.4
30	GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subu...	31	1.4
31	GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subuni...	31	1.4
32	GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subu...	31	1.4
33	GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subu...	31	1.4
34	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	30	2.3
35	SC6A6_HUMAN (P31641) Sodium- and chloride-dependent taurine tran...	30	3.0
36	RBA1_CAEEL (P90917) Probable histone-binding protein rba-1	30	3.0
37	UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 1...	30	3.0
38	PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog	30	3.0
39	WDR47_HUMAN (O94967) WD-repeat protein 47	29	3.9
40	WDR47_MOUSE (Q8CGF6) WD-repeat protein 47	29	3.9
41	SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component...	29	3.9
42	HEM3_KLULA (Q6CT60) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	29	3.9
43	GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subu...	29	3.9
44	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	29	3.9
45	S6A11_HUMAN (P48066) Sodium- and chloride-dependent GABA transpo...	29	3.9
46	POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11	29	5.2
47	WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)	29	5.2
48	Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491	29	5.2
49	S6A11_RAT (P31647) Sodium- and chloride-dependent GABA transport...	29	5.2
50	S6A11_MOUSE (P31650) Sodium- and chloride-dependent GABA transpo...	29	5.2
51	MED14_CAEEL (Q03570) RNA polymerase II mediator complex subunit ...	29	5.2
52	CLPP1_BACHK (Q6HHU9) ATP-dependent Clp protease proteolytic subu...	28	6.7
53	CLPP1_BACCR (Q81CH1) ATP-dependent Clp protease proteolytic subu...	28	6.7
54	CLPP1_BACAN (Q81PL4) ATP-dependent Clp protease proteolytic subu...	28	6.7
55	TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transdu...	28	6.7
56	TUP11_SCHPO (Q09715) Transcriptional repressor tup11	28	6.7
57	SPG16_MOUSE (Q8K450) Sperm-associated antigen 16 protein (PF20 p...	28	8.8
58	CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chrom...	28	8.8
59	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	28	8.8
60	YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C	28	8.8
61	TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni...	28	8.8

>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 30/117 (25%), Positives = 52/117 (44%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           KTCR+WD      +V V  G+   + ++     G  ++ A+    +H++D+ +  + +  
Sbjct: 485 KTCRLWDVHR-GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTM 543

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRTYGSLLQFGRLYTNWYHDSLL*GESGAXVXP 71
               G I  +SFS ++  L  G  D T  +   F   Y N    SL    +G+ V P
Sbjct: 544 RGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSL----TGSVVTP 596



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/86 (18%), Positives = 36/86 (41%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQEL 239
           + R+W   +   A+   KG+ G +  + F  +G + + A       ++     Y  R   
Sbjct: 402 SARLWSV-DTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFA 460

Query: 238 DFFGEISGMSFSPDTDALFVGVWDRT 161
               ++  ++F P++  +  G  D+T
Sbjct: 461 GHLSDVDCVTFHPNSAYVLTGSSDKT 486

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>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466|
          Length = 1526

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
            +T R+WD  + S+  ++ +G+   +RS+ F+S G  L+       V ++D+ S       
Sbjct: 1012 QTVRLWDISS-SQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL 1070

Query: 241  LDFFGEISGMSFSPDT-------DALFVGVWDRTYGSLLQFGRLYTNW 119
                  +  + FSPD        D   V +WD + G+ L   + YT+W
Sbjct: 1071 QGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSW 1118



 Score = 34.3 bits (77), Expect = 0.12
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
 Frame = -1

Query: 412  RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
            R W+A    K +   KG+   + S+ F+  G+ L+       V ++D+ S    +     
Sbjct: 889  RFWEAAT-GKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGH 947

Query: 232  FGEISGMSFSPDTDALFVG-------VWDRTYGSLLQFGRLYTNWYH 113
               +  + FSP++  L  G       +WD + G  L   + +T W +
Sbjct: 948  TSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVY 994



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 14/53 (26%), Positives = 33/53 (62%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKS 263
            +T R+W+  +  + ++ L G++ ++RS+ F+S G  L+     + + ++DVK+
Sbjct: 1432 QTVRLWNISS-GECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKT 1483

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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/86 (25%), Positives = 42/86 (48%)
 Frame = -1

Query: 418  TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQEL 239
            T ++WD     K +  LK + G +RS+ F++ GQ L+       + I++  +    +  +
Sbjct: 791  TIKLWDVSQ-GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYI 849

Query: 238  DFFGEISGMSFSPDTDALFVGVWDRT 161
                 +  +++SPD+  L  G  DRT
Sbjct: 850  GHTNSVYSIAYSPDSKILVSGSGDRT 875



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
            +T +IWD +   K +  L G+   +  I F+  G+ L+ A     V I+DV +       
Sbjct: 1126 QTVKIWDWQQ-GKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHIC 1184

Query: 241  LDFFGEISGMSFSPDTDALFVGVWDRT 161
            +     +S ++FSPD + +  G  D+T
Sbjct: 1185 IGHTHLVSSVAFSPDGEVVASGSQDQT 1211

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>KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1|
          Length = 837

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           +IWD R     +H  KG+   +  +RFT  G+++      + V ++D+ +     +    
Sbjct: 126 KIWDIRKKG-CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
            G+I  + F P    L  G  DRT
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRT 208

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>GBB2_DROME (P29829) Guanine nucleotide-binding protein beta subunit 2|
          Length = 346

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -1

Query: 403 DARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGE 224
           DA  ++K V  L G  G + S RF   G  ++ +      H +D++   K        G+
Sbjct: 134 DASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICH-WDLEKGVKTMDFNGHAGD 192

Query: 223 ISGMSFSPDTDALFVGVWDRT 161
           I+G+S SPD      G  D+T
Sbjct: 193 IAGLSLSPDMKTYITGSVDKT 213

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>CWF17_SCHPO (O94620) Cell cycle control protein cwf17|
          Length = 340

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           +IWD RN +   HVLKG+   I S+  +  G  L      + V IFDVK     +++L  
Sbjct: 202 KIWDLRN-NHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQI 260

Query: 232 F-GEISG 215
           F G I G
Sbjct: 261 FEGAIHG 267

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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
            KT +IW  R+  KA+  L G+   +  + F+  G+ L+ A   + V +++V     ++  
Sbjct: 1426 KTVKIWRVRD-GKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTL 1484

Query: 241  LDFFGEISGMSFSPDTDAL-------FVGVWDRTYGSLLQ 143
                 E+  +SFSPD   +        + +WD   G+L++
Sbjct: 1485 KGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIK 1524

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>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5|
           (TBP-associated factor 5) (TBP-associated factor 90 kDa)
           (TAFII-90)
          Length = 798

 Score = 36.2 bits (82), Expect = 0.032
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           KTCR+WD  +   +V +  G+   + SI     G++LS       ++++D+ +  KR ++
Sbjct: 631 KTCRMWDV-STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTG-KRLKQ 688

Query: 241 LDFFGE--ISGMSFSPDTDALFVGVWDRT 161
           +   G+  I  +S+S + + L  G  D T
Sbjct: 689 MRGHGKNAIYSLSYSKEGNVLISGGADHT 717



 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/87 (21%), Positives = 37/87 (42%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           KT R+W + +   A+   KG+   +  + F+  G + + A       ++     Y  R  
Sbjct: 547 KTVRLW-SMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIF 605

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                ++  +SF P+   +F G  D+T
Sbjct: 606 AGHLNDVDCVSFHPNGCYVFTGSSDKT 632

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>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 690

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKS-----DYK 254
           T +I+D    +K V  L G+  +IR + F  +G+F++       V ++DV+       YK
Sbjct: 82  TMKIYDLEP-AKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYK 140

Query: 253 RRQELDFFGEISGMSFSPD-------TDALFVGVWDRTYGSLLQ 143
              +     +++ + FSPD       ++   + +WD T G L Q
Sbjct: 141 GHSD-----QVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQ 179



 Score = 35.4 bits (80), Expect = 0.055
 Identities = 20/84 (23%), Positives = 41/84 (48%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R     ++  KG+   +  I+F+  G++L  A     + ++D+      ++  + 
Sbjct: 126 KLWDVRRKG-CIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNH 184

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
            G ++G+ F P+   L  G  DRT
Sbjct: 185 TGGVTGIEFHPNEFLLASGSSDRT 208

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>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           KT R+WD ++    + VL+G+   + S  F+     L     +  V ++++      R+ 
Sbjct: 193 KTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKL 252

Query: 241 LDFFGEISGMSFSPDTDALF-------VGVWDRTYGS-LLQFGRLY 128
                ++    FSPD   L        V +WD   G  L++FG L+
Sbjct: 253 EGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLF 298

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>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 658

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R     V   +G+  A+R +RF+  G++L+ A     V ++D+ +     +    
Sbjct: 130 KLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
            G ++ + F P+   L  G  DRT
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRT 212

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>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 655

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R     V   +G+  A+R +RF+  G++L+ A     V ++D+ +     +    
Sbjct: 130 KLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
            G ++ + F P+   L  G  DRT
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRT 212

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>PRW1_SCHPO (O14021) RbAp48-related WD40-repeat protein prw1|
          Length = 431

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPAD 290
           KT  +WD RNL++ +H L+G+   +  I F+ + + +  +  AD
Sbjct: 304 KTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSAD 347

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>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 657

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 21/84 (25%), Positives = 39/84 (46%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R     +   K +  A+R +RF+  G++L+ A     V ++D+ +     +    
Sbjct: 129 KLWDVRRKG-CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 187

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
            G ++ + F P    L  G  DRT
Sbjct: 188 SGPVNVVEFHPSEYLLASGSSDRT 211



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           R+WD    +K +  L G+   I S+ F  YG F++       + ++DV+      +    
Sbjct: 87  RVWDLE-AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 145

Query: 232 FGEISGMSFSPD-------TDALFVGVWDRTYGSLL 146
              +  + FSPD        D   V +WD T G ++
Sbjct: 146 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 181

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>HIRA_DROME (O17468) HIRA protein homolog (dHIRA)|
          Length = 1047

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQEL 239
           T  IWDA+    +V  LKG+ G ++ + +   G+FL+       + I++  +        
Sbjct: 152 TVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTIT 211

Query: 238 DFFGEISG------MSFSPD 197
           + F E  G      +S+SPD
Sbjct: 212 EPFEECGGTTHILRLSWSPD 231

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>HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 564

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRF 332
           KT  IWD RN+   VH L+G+  A+ S+ +
Sbjct: 311 KTIGIWDMRNMKSKVHTLEGHQDAVTSLEW 340

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>REC14_SCHPO (Q09150) Meiotic recombination protein rec14|
          Length = 302

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
 Frame = -1

Query: 376 HVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISGMSFSPD 197
           HVL G+   +RS+ F+     L+ A  +  + I+DV S  +  Q       I  ++F+P 
Sbjct: 181 HVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPV 240

Query: 196 TDALF-------VGVWD 167
            D L        + +WD
Sbjct: 241 GDLLLSADVEGKIKIWD 257

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>WDR20_MOUSE (Q9D5R2) WD-repeat protein 20|
          Length = 567

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
 Frame = -1

Query: 388 SKAVHVLKGNLG--AIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISG 215
           SK+   LK  +G  A+    F+  G+FL+      F+ +F+  S         +FG +  
Sbjct: 206 SKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLC 265

Query: 214 MSFSPDTDALFVG-------VWDRTYGSLLQFGRLYTNW 119
           + +SPD   +  G       VW      ++  GR + +W
Sbjct: 266 LCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSW 304

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>SC6A6_BOVIN (Q9MZ34) Sodium- and chloride-dependent taurine transporter|
          Length = 620

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = -2

Query: 234 SLVRYLXCXSARTQTPFSWACGIERMVASSSLGACIPIGIMTRCFEAKAERMLXL--LVL 61
           SLV+Y+     +  T  +WA G+   +A SS+  C+P+ ++ R  + +   ++ L  L+ 
Sbjct: 523 SLVKYVPLTYNKVYTYPTWAIGLGWCLALSSM-VCVPLVMVIRLAQTEGPFLVRLKYLLT 581

Query: 60  PLSCTEWLVWHK 25
           P     W V H+
Sbjct: 582 PREPNRWAVEHE 593

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>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 423

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSI 338
           KT  IWD RN+ + VH L+G+  A+ S+
Sbjct: 296 KTIGIWDLRNVKEKVHTLEGHNDAVTSL 323

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>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -1

Query: 406 WDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSD 260
           +D RN+S+ VHV  G+  A+  ++F S  + L+ A     + ++DVK +
Sbjct: 530 YDLRNISRPVHVFTGHKKAVSYVKFLSNDE-LASASTDSTLRLWDVKQN 577

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>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog|
          Length = 694

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 21/84 (25%), Positives = 39/84 (46%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R     V   KG+  A+R + F+  G++L+ A     V ++D+ +     +    
Sbjct: 130 KLWDVRRKG-CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
              ++ + F P+   L  G  DRT
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRT 212

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>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 675

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -1

Query: 406 WDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSD 260
           +D RN+S+ +HV  G+  A+  ++F S  + L+ A     + ++DVK +
Sbjct: 533 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDN 580

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>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFT-------SYGQFLSMAEPADFVHIFDVKSD 260
           T R+WD     + +HVL G++ A+R +++        +Y   + + +P     +  ++  
Sbjct: 482 TLRVWDIET-GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 540

Query: 259 YKRRQELDFFGEISGMSFSPDTDALFVGVWDRTYGSLL 146
             R   L F G I  +S S DT    + VWD   G+ +
Sbjct: 541 TNRVYSLQFDG-IHVVSGSLDTS---IRVWDVETGNCI 574

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>GBB_CRYPA (O14435) Guanine nucleotide-binding protein beta subunit|
          Length = 359

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R   KAV    G+   I +I+F   G             +FD+++D    +EL+ 
Sbjct: 227 KLWDIR-AGKAVQTFAGHESDINAIQFFPDGHSFVTGSDDATCRLFDIRAD----RELNV 281

Query: 232 FGE------ISGMSFSPDTDALFVG-------VWDRTYG 155
           +G       I+ ++ S     LF G       VWD T G
Sbjct: 282 YGSESILCGITSVATSVSGRLLFAGYDDFECKVWDVTRG 320

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>SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 protein homolog)|
          Length = 631

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 24/84 (28%), Positives = 38/84 (45%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R L   V +  G       + F S G+ L+ A     +H+ D+KS  +  + +  
Sbjct: 545 KLWDFRKLLPIVSIDIGPSPG-NEVNFDSSGRVLAQASGNGVIHLLDLKSG-EIHKLMGH 602

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
             E   + FS D + LF G  D T
Sbjct: 603 ENEAHTVVFSHDGEILFSGGSDGT 626

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>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFT-------SYGQFLSMAEPADFVHIFDVKSD 260
           T R+WD     + +HVL G++ A+R +++        +Y   + + +P     +  ++  
Sbjct: 404 TLRVWDIET-GQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462

Query: 259 YKRRQELDFFGEISGMSFSPDTDALFVGVWDRTYGSLL 146
             R   L F G I  +S S DT    + VWD   G+ +
Sbjct: 463 TNRVYSLQFDG-IHVVSGSLDTS---IRVWDVETGNCI 496

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>GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 304 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 363

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 364 FGHENRVSTLRVSPDGTAFCSGSWDHT 390

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>GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 304 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 363

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 364 FGHENRVSTLRVSPDGTAFCSGSWDHT 390

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>GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 262 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 321

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 322 FGHENRVSTLRVSPDGTAFCSGSWDHT 348

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>GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 262 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 321

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 322 FGHENRVSTLRVSPDGTAFCSGSWDHT 348

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>GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 262 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSIL 321

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 322 FGHENRVSTLRVSPDGTAFCSGSWDHT 348

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>GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 418 TCRIWDAR-NLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQE 242
           TCR++D R +   A++  +  +    S+ F+  G+ L        ++++DV    +    
Sbjct: 262 TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 321

Query: 241 LDFFGEISGMSFSPDTDALFVGVWDRT 161
                 +S +  SPD  A   G WD T
Sbjct: 322 FGHENRVSTLRVSPDGTAFCSGSWDHT 348

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
 Frame = -1

Query: 370  LKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISGMSFSPDTD 191
            L+G+  ++ S+ F++ GQ ++       + I+D  S    +      G +  ++FSPD +
Sbjct: 837  LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896

Query: 190  ALFVG-------VWDRTYGSLLQ 143
             +  G       +WD   G+  Q
Sbjct: 897  RVASGSDDKTIKIWDAASGTCTQ 919

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>SC6A6_HUMAN (P31641) Sodium- and chloride-dependent taurine transporter|
          Length = 620

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = -2

Query: 234 SLVRYLXCXSARTQTPFSWACGIERMVASSSLGACIPIGIMTRCFEAKAERMLXL--LVL 61
           SLV+Y+     +T    +WA G+   +A SS+  C+P+ I+ R  + +   ++ +  L+ 
Sbjct: 523 SLVKYVPLTYNKTYVYPNWAIGLGWSLALSSM-LCVPLVIVIRLCQTEGPFLVRVKYLLT 581

Query: 60  PLSCTEWLVWHKLGVSP 10
           P     W V  + G +P
Sbjct: 582 PREPNRWAV-EREGATP 597

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>RBA1_CAEEL (P90917) Probable histone-binding protein rba-1|
          Length = 412

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFT-SYGQFLSMAEPADFVHIFDV 269
           KT  +WD RN+ K ++ LK +   I  + F+  Y   L+ +   D V ++D+
Sbjct: 287 KTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDI 338

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>UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 15 homolog|
          Length = 515

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/80 (22%), Positives = 36/80 (45%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD     + +  L+ +   + S+  +S GQ L  A     V ++   + YK     D+
Sbjct: 230 KVWDILKGGQLLVSLRNHHKTVTSLCLSSSGQRLLSASLDRHVKVYSTMN-YKVVHSFDY 288

Query: 232 FGEISGMSFSPDTDALFVGV 173
              I  ++ +PD   + VG+
Sbjct: 289 AASILSLALAPDDQMIVVGM 308

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>PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog|
          Length = 899

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 286 VHIFDVKSDYKRRQELDFFGEISGMSFSPDTDALFVGVWDRTYGSLLQFGRLYTN 122
           +HI+ V++     +     G +S ++F+P+   L  G WDRT      F R  T+
Sbjct: 449 IHIWSVQTGQLLDRLSGHEGPVSSLAFAPNGGLLVSGSWDRTARIWSIFNRTQTS 503

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>WDR47_HUMAN (O94967) WD-repeat protein 47|
          Length = 919

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVL----KGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYK 254
            KT R WD R +   V V+     G   A+ S+     G+ L+  +      ++D++    
Sbjct: 776  KTVRFWDLR-VPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRM 834

Query: 253  RRQELDFFGEISGMSFSPDTDALFVGVWD 167
             +       ++  + FSP    L  G +D
Sbjct: 835  VQSYHPHSSDVRSVRFSPGAHYLLTGSYD 863

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>WDR47_MOUSE (Q8CGF6) WD-repeat protein 47|
          Length = 920

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVL----KGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYK 254
            KT R WD R +   V V+     G   A+ S+     G+ L+  +      ++D++    
Sbjct: 777  KTVRFWDLR-VPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRM 835

Query: 253  RRQELDFFGEISGMSFSPDTDALFVGVWD 167
             +       ++  + FSP    L  G +D
Sbjct: 836  VQSYHPHSSDVRSVRFSPGAHYLLTGSYD 864

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>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)|
           (COMPASS component swd3) (Complex proteins associated
           with set1 protein swd3)
          Length = 380

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/86 (23%), Positives = 36/86 (41%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQEL 239
           T +IW A    +    L G+   I  +++ +  ++L+ A     + I+D +     R   
Sbjct: 77  TIKIWSALTF-RLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLK 135

Query: 238 DFFGEISGMSFSPDTDALFVGVWDRT 161
                +S + F+P    L  G WD T
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDET 161

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>HEM3_KLULA (Q6CT60) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 327

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = -2

Query: 174 CGIERMVASSSLGAC-IPIGIMTRCFEAKAERMLXLLVLPLSCTEWL-VWHKLGVSPKPE 1
           C  ER +  +  G C +PIG+++   E+     L  +V+ +  TEW+ + HK+ +S + E
Sbjct: 237 CLAERSLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNERE 296

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>GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subunit-like|
           protein
          Length = 329

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
 Frame = -1

Query: 421 KTCRIW-----DARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDY 257
           KT  +W     DA +  KA   LKG+   ++ +  +  GQF       + + ++D+    
Sbjct: 44  KTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGV 103

Query: 256 KRRQELDFFGEISGMSFSPDTDALFVGVWDRT 161
             R       ++  ++FS D   +  G  D T
Sbjct: 104 STRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
 Frame = -1

Query: 418  TCRIWDARNLSKAVHVLKGNLGAIRSIRFT-------SYGQFLSMAEPADFVHIFDVKSD 260
            T R+WD    S  +HVL G+L A+R +++        +Y   + +  P     +  ++  
Sbjct: 1096 TLRVWDIEQGS-CLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGH 1154

Query: 259  YKRRQELDFFGEISGMSFSPDTDALFVGVWDRTYGS 152
              R   L F G +  +S S DT    + VWD   G+
Sbjct: 1155 TNRVYSLQFDG-LHVVSGSLDTS---IRVWDVETGN 1186

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>S6A11_HUMAN (P48066) Sodium- and chloride-dependent GABA transporter 3|
          Length = 632

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = -2

Query: 231 LVRYLXCXSARTQTPFSWACGIERMVASSSLGACIPIGIMTRCFEAKAERMLXLLVLPLS 52
           L++Y         T  +W  GI  ++A SS+  CIP+ I    ++ +      L  L   
Sbjct: 532 LIKYKPLKYNNIYTYPAWGYGIGWLMALSSM-LCIPLWICITVWKTEGTLPEKLQKLTTP 590

Query: 51  CTEWLVWHKLGVSPK 7
            T+  +  KLGVSP+
Sbjct: 591 STDLKMRGKLGVSPR 605

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>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11|
          Length = 506

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
 Frame = -1

Query: 418 TCRIW--DARNLSKA-VHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDY 257
           T R+W  DA + ++A +HVL+G+L ++ S++++S    +  A     +  +D+ + +
Sbjct: 324 TARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGH 380

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>WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)|
          Length = 569

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
 Frame = -1

Query: 355 GAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISGMSFSPDTDALFVG 176
           GA+    F+  G+FL+      F+ +F+  S         +FG +  + +SPD   +  G
Sbjct: 221 GALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTG 280

Query: 175 -------VWDRTYGSLLQFGRLYTNW 119
                  VW      ++  G  + +W
Sbjct: 281 GEDDLVTVWSFVDCRVIARGHGHKSW 306

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>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491|
          Length = 348

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
 Frame = -1

Query: 385 KAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISGMSF 206
           + V+  +  +     +  ++ GQ+L++A   + V +  V+   +    +    ++SG++F
Sbjct: 94  EVVYSQRSPVNNFADLAISADGQWLAIAADNN-VDVRRVRDGMRVETLVGHTDKVSGVAF 152

Query: 205 SPDTDALF--------VGVWDRTYGSLLQ 143
           SPD + +         + +W+R  G+L+Q
Sbjct: 153 SPDGETIVSVSGGDRTIRIWERASGNLIQ 181



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = -1

Query: 388 SKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFFGEISGMS 209
           +K +  ++G    I +I  +   ++++ A     + IFD+ +  +        G +  ++
Sbjct: 262 AKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLA 321

Query: 208 FSPDTDALFVGVWDRT 161
           FSPD + L+ G  D+T
Sbjct: 322 FSPDGNTLYSGAEDKT 337

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>S6A11_RAT (P31647) Sodium- and chloride-dependent GABA transporter 3|
          Length = 627

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = -2

Query: 231 LVRYLXCXSARTQTPFSWACGIERMVASSSLGACIPIGIMTRCFEAKAERMLXLLVLPLS 52
           LV+Y         T  +W  GI  ++A SS+  CIP+ I  + ++ +      L  L + 
Sbjct: 527 LVKYKPLKYNNVYTYPAWGYGIGWLMALSSM-LCIPLWIFIKLWKTEGTLPEKLQKLTVP 585

Query: 51  CTEWLVWHKLGVSPK 7
             +  +  KLG SP+
Sbjct: 586 SADLKMRGKLGASPR 600

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>S6A11_MOUSE (P31650) Sodium- and chloride-dependent GABA transporter 4 (GAT4)|
          Length = 627

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = -2

Query: 231 LVRYLXCXSARTQTPFSWACGIERMVASSSLGACIPIGIMTRCFEAKAERMLXLLVLPLS 52
           LV+Y         T  +W  GI  ++A SS+  CIP+ I  + ++ +      L  L + 
Sbjct: 527 LVKYKPLKYNNVYTYPAWGYGIGWLMALSSM-LCIPLWIFIKLWKTEGTLPEKLQKLTVP 585

Query: 51  CTEWLVWHKLGVSPK 7
             +  +  KLG SP+
Sbjct: 586 SADLKMRGKLGASPR 600

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>MED14_CAEEL (Q03570) RNA polymerase II mediator complex subunit 14 (Mediator|
           complex subunit rgr-1)
          Length = 1374

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 260 VALHIEDVHKVRWFRHRQ--ELXVRREADRSNGSKVTFQYMDCFR*VPRVPD 409
           +ALHI DV  V  F   +  E  +R      N ++ TFQ+  CF  +P V D
Sbjct: 589 LALHITDVKNVVPFEASEFFECCIRCCLRLDNRNRYTFQFEMCFENIPLVRD 640

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>CLPP1_BACHK (Q6HHU9) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 193

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 25  LMPHQPFGAAEGEDKQVQHXLRFRLKAASHDTNWYTGAQTG 147
           +M HQP G A+G+  +++   + R+    HD N     +TG
Sbjct: 120 IMIHQPLGGAQGQATEIEITAK-RILKLKHDINKMIAEKTG 159

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>CLPP1_BACCR (Q81CH1) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 193

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 25  LMPHQPFGAAEGEDKQVQHXLRFRLKAASHDTNWYTGAQTG 147
           +M HQP G A+G+  +++   + R+    HD N     +TG
Sbjct: 120 IMIHQPLGGAQGQATEIEITAK-RILKLKHDINKMIAEKTG 159

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>CLPP1_BACAN (Q81PL4) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 193

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 25  LMPHQPFGAAEGEDKQVQHXLRFRLKAASHDTNWYTGAQTG 147
           +M HQP G A+G+  +++   + R+    HD N     +TG
Sbjct: 120 IMIHQPLGGAQGQATEIEITAK-RILKLKHDINKMIAEKTG 159

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>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like|
           1Y protein) (Transducin-beta-like 1, Y-linked)
          Length = 522

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKS 263
           T R+WD        H L  +   + S+ F+  G++L+      +VHI++ +S
Sbjct: 433 TVRLWDVEQ-GVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQS 483

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>TUP11_SCHPO (Q09715) Transcriptional repressor tup11|
          Length = 614

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNL-GAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQ 245
           +T R+WD         +LK  +   + +I  +   QF+++      + ++ V      R 
Sbjct: 424 RTARLWDVET---GQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERL 480

Query: 244 ELDFFGEISGMSFSPDTDALFVGVWDRT 161
           E      +  ++FSPD+  L  G  D+T
Sbjct: 481 E-GHKESVYSIAFSPDSSILLSGSLDKT 507

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>SPG16_MOUSE (Q8K450) Sperm-associated antigen 16 protein (PF20 protein homolog)|
          Length = 639

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = -1

Query: 412 RIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDF 233
           ++WD R L   V +  G       + F   G+ L+ A     +H+ D+KS  +  + +  
Sbjct: 553 KLWDFRKLIPIVSIDVGPSSG-NEVNFDQSGRVLAQASANGIIHLLDLKSG-QIHKLVGH 610

Query: 232 FGEISGMSFSPDTDALFVGVWDRT 161
             E+  + FS   + L+ G  D T
Sbjct: 611 ESEVHSVVFSHLGENLYSGGSDGT 634

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>CAF1_DROME (Q24572) Probable histone-binding protein Caf1 (Chromatin assembly|
           factor 1 p55 subunit) (CAF-1 p55 subunit) (dCAF-1)
           (Nucleosome remodeling factor 55 kDa subunit) (NURF-55)
          Length = 430

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
 Frame = -1

Query: 421 KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPAD-FVHIFDVKSDYKRRQ 245
           KT  +WD RNL   +H  + +   I  ++++ + + +  +   D  +H++D+    + + 
Sbjct: 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359

Query: 244 ---------ELDFF-----GEISGMSFSPDTDALFVGVWDRTYGSLLQFGRLYTNWYHD 110
                    EL F       +IS  S++P+   +   V   +  +++Q  ++  N Y+D
Sbjct: 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV---SEDNIMQVWQMAENVYND 415

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 421  KTCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMA 302
            KT ++W+   L K + VL+G+  A+ ++RF+   Q++  A
Sbjct: 1405 KTAQLWNV--LGKKLTVLRGHQDAVLNVRFSPDSQYIVTA 1442

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>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C|
          Length = 515

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 418 TCRIWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKS 263
           T RIWD  +    +H LKG+   +  + ++  G+ ++     + + ++D KS
Sbjct: 167 TARIWDC-DTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKS 217

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>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/80 (21%), Positives = 37/80 (46%)
 Frame = -1

Query: 409 IWDARNLSKAVHVLKGNLGAIRSIRFTSYGQFLSMAEPADFVHIFDVKSDYKRRQELDFF 230
           +WD  +    V  LKG+   + S+RF+  G+ L+     + V ++D    ++  +  DF 
Sbjct: 696 LWDIGH-GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFT 754

Query: 229 GEISGMSFSPDTDALFVGVW 170
                ++   ++  L +G +
Sbjct: 755 TATGHINLPENSQELLLGTY 774


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,280,306
Number of Sequences: 219361
Number of extensions: 1187055
Number of successful extensions: 3378
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3376
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result