Clone Name | rbasd22p03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1763 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1605 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1546 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1545 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1486 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1485 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1426 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1425 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1366 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1365 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1306 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1305 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1246 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1245 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1186 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1185 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1126 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1125 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1080
>ref|XM_506946.1| PREDICTED Oryza sativa (japonica cultivar-group), P0654B04.16-1 mRNA Length = 1805 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1647 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1588 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1587 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1528 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1527 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1468 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1467 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1408 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1407 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1348 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1347 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1288 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1287 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1228 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1227 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1168 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1167 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1122
>ref|XM_467524.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1649 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1590 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1589 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1530 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1529 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1470 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1469 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1410 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1409 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1350 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1349 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1290 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1289 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1230 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1229 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1170 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1169 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1124
>dbj|AK112042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D04, full insert sequence Length = 1262 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 910 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 851 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 850 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 791 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 790 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 731 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 730 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 671 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 670 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 611 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 610 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 551 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 550 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 491 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 490 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 431 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 430 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 385
>dbj|AK111973.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A04, full insert sequence Length = 943 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 784 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 725 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 724 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 665 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 664 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 605 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 604 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 545 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 544 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 485 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 484 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 425 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 424 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 365 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 364 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 305 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 304 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 259
>dbj|AK111506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D05, full insert sequence Length = 1806 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1647 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1588 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1587 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1528 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1527 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1468 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1467 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1408 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1407 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1348 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1347 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1288 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1287 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1228 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1227 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1168 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1167 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1122
>dbj|AK098883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H19, full insert sequence Length = 1764 Score = 488 bits (246), Expect = e-134 Identities = 456/526 (86%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1605 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1546 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1545 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1486 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1485 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1426 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1425 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1366 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1365 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1306 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1305 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1246 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1245 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1186 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1185 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1126 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1125 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1080
>dbj|AK111669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D17, full insert sequence Length = 1983 Score = 464 bits (234), Expect = e-127 Identities = 454/526 (86%), Gaps = 1/526 (0%) Strand = Plus / Minus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 1649 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1590 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 || ||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 1589 tcaatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1530 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 1529 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1470 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 1469 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1410 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 1409 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1350 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| | ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 1349 ccaaac-cggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1291 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 558 |||||||| || ||| | ||| |||||||||| |||||||||||||||||||||||| Sbjct: 1290 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1231 Query: 559 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 618 ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1230 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1171 Query: 619 gctcagtgatgtatgattcactggccaatcaaactgaaagtgcttg 664 |||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 1170 actcaatgctgtatgattcactggccattcaaactgaaaatgcttg 1125
>gb|AY596536.1| Saccharum officinarum clone SCJFRZ2007F05, complete sequence Length = 1915 Score = 452 bits (228), Expect = e-124 Identities = 468/548 (85%) Strand = Plus / Minus Query: 133 tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 192 ||||| ||| |||||| ||||| | | ||| |||||||| || ||||| || ||||| || Sbjct: 1531 tcaaaacagggagtcaagatacgagtagttgtacaggcggccgaactgaagcaggctgcc 1472 Query: 193 atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 252 |||| | ||||||||||| || |||||||| | ||| ||||| |||||||| ||| | || Sbjct: 1471 atacatcctatcccacacaccgacgaaaagtgtgtcagtgtctgggctgaacgacgtgcc 1412 Query: 253 agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 312 |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| | Sbjct: 1411 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 1352 Query: 313 gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 372 ||||||||||||||| || ||||| ||||| |||| |||||| || ||||| |||||||| Sbjct: 1351 gatgtgcacaaagtcagcaggttcggccatggacatgaactggccatccgaggtgaagcg 1292 Query: 373 gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 432 |||||| | ||||||||||||||||| |||| |||||||| | ||| || || ||||| Sbjct: 1291 gatcgaccggatggctccaaggttacccctcaacacatggacggattttgagagattcct 1232 Query: 433 cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 492 | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1231 cacgtcccagattcggcatgtcttgtcttggttgccagtagcaaatgttcgcccatcagg 1172 Query: 493 gctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcc 552 |||||| || ||||| ||||| |||| |||| ||||| ||||||||||| |||||||| Sbjct: 1171 gctccaagccgatgcaaatgaatagtcccgatgtccttttatggaatgaagcgtctttcc 1112 Query: 553 tgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttcc 612 || |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||| Sbjct: 1111 agagttggcatcaataagtagaccatcaggatcatcccccacaataacaactacctttct 1052 Query: 613 atcagggctcagtgatgtatgattcactggccaatcaaactgaaagtgcttgcataactg 672 ||||| |||| || ||||||||||||||||| ||||||||||| |||||| ||| ||| Sbjct: 1051 gtcaggactcaacgaagtatgattcactggccattcaaactgaaaatgcttgaatagctg 992 Query: 673 gaatctct 680 ||| |||| Sbjct: 991 gaacctct 984
>gb|AY106954.1| Zea mays PCO143990 mRNA sequence Length = 1884 Score = 420 bits (212), Expect = e-114 Identities = 464/548 (84%) Strand = Plus / Minus Query: 133 tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 192 ||||| ||| |||||| ||||| | | ||| |||||||| ||||| || || ||||| || Sbjct: 1534 tcaaaacagggagtcaagatacgagtagttgtacaggcggccaaattgtagcaggctgcc 1475 Query: 193 atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 252 |||| | ||||||||||| || |||||||| | ||| ||||| |||||||| || | || Sbjct: 1474 atacatcctatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtgcc 1415 Query: 253 agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 312 |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| | Sbjct: 1414 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 1355 Query: 313 gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 372 ||||||||||||||| || ||||| ||||| |||| |||||| || ||||| |||||||| Sbjct: 1354 gatgtgcacaaagtcagcaggttcagccatggacatgaactggccatccgaggtgaagcg 1295 Query: 373 gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 432 ||| || | ||||||||||||||||| |||| |||||||| | ||| || |||||||| Sbjct: 1294 gatggaccggatggctccaaggttacccctcaacacatggacggattttgaaaggttcct 1235 Query: 433 cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 492 | ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 1234 cacgtcccagattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatcagg 1175 Query: 493 gctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcc 552 |||||| || ||||| |||||| |||| |||| ||||| |||||||||| |||||||| Sbjct: 1174 gctccaagccgatgcaaatgagtagtcccgatgtccttttatggaatgaactgtctttcc 1115 Query: 553 tgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttcc 612 || || ||||||||||||| ||||| ||||||||| |||||||||||||| | ||||| Sbjct: 1114 agagtttgcatcaataagtagaccatcaggatcatcacccacaataacaaccacctttct 1055 Query: 613 atcagggctcagtgatgtatgattcactggccaatcaaactgaaagtgcttgcataactg 672 ||||| |||| || | ||||||||||||||| ||||||||||| |||||| ||| ||| Sbjct: 1054 gtcaggactcaacgaagcatgattcactggccattcaaactgaaaatgcttgaatagctg 995 Query: 673 gaatctct 680 |||||||| Sbjct: 994 gaatctct 987
>gb|BT023993.1| Zea mays clone EL01N0409G03 mRNA sequence Length = 1294 Score = 377 bits (190), Expect = e-101 Identities = 415/490 (84%) Strand = Plus / Minus Query: 191 ccatacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatc 250 |||||| | ||||||||||| || |||||||| | ||| ||||| |||||||| || | Sbjct: 1085 ccatacatcctatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtg 1026 Query: 251 ccagatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcg 310 || |||||||| ||||||||||||||||| |||||| | |||||| | |||||||| ||| Sbjct: 1025 ccggatatctcgccaaagaagtccagctcctgccttttgttgtaggcactcttcacgtcg 966 Query: 311 aagatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaag 370 | |||||||||||||| | ||||| ||||| |||| |||||| || ||||| |||||| Sbjct: 965 taaatgtgcacaaagtcaggaggttcagccatggacatgaactggccatccgaggtgaag 906 Query: 371 cggatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttc 430 ||||| || | ||||||||||||||||| |||| |||||||| | ||| || |||||| Sbjct: 905 cggatggaccggatggctccaaggttacccctcaacacatggacggattttgagaggttc 846 Query: 431 ctcgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatca 490 ||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 845 ctcacgtcccagattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatca 786 Query: 491 gggctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtcttt 550 |||||||| || ||||| |||||| |||| |||| ||||| |||||||||| |||||| Sbjct: 785 gggctccaagccgatgcaaatgagtagtcccgatgtccttttatggaatgaactgtcttt 726 Query: 551 cctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaagcttt 610 || || || ||||||||||||| ||||| ||||||||| |||||||||||||| | |||| Sbjct: 725 ccagagtttgcatcaataagtagaccatcaggatcatcacccacaataacaaccaccttt 666 Query: 611 ccatcagggctcagtgatgtatgattcactggccaatcaaactgaaagtgcttgcataac 670 | ||||| |||| || | ||||||||||||||| ||||||||||| |||||| ||| | Sbjct: 665 ctgtcaggactcaacgaagcatgattcactggccattcaaactgaaaatgcttgaatagc 606 Query: 671 tggaatctct 680 |||||||||| Sbjct: 605 tggaatctct 596
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 337 bits (170), Expect = 3e-89 Identities = 350/410 (85%) Strand = Plus / Plus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 29953315 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 29953374 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 29953375 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 29953434 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 29953435 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 29953494 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 29953495 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 29953554 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 29953555 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 29953614 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 29953615 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 29953674 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 548 |||||||| || ||| | ||| |||||||||| |||||||||||||| Sbjct: 29953675 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 29953724 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 547 ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 606 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 29953852 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 29953911 Query: 607 ctttccatcagggctcagtgatgtatg 633 ||||| ||||| |||| || |||||| Sbjct: 29953912 ctttctgtcaggactcaatgctgtatg 29953938 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 230 gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 289 ||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 29965636 gtgtctgggctgaaagacattccagatatctgaccgaagaagtccagctcttgccttctg 29965695 Query: 290 ttgta 294 ||||| Sbjct: 29965696 ttgta 29965700 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 160 gttatacaggcgcccaaactggaggaggctaccatacgttctatcccacac 210 ||||||||| || |||||||||||||||| ||||| |||||||||||||| Sbjct: 29963910 gttatacagacggtcaaactggaggaggctgccatatgttctatcccacac 29963960 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 attcactggccaatcaaactgaaagtgcttg 664 |||||||||||| ||||||||||| |||||| Sbjct: 29954280 attcactggccattcaaactgaaaatgcttg 29954310
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 337 bits (170), Expect = 3e-89 Identities = 350/410 (85%) Strand = Plus / Plus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 53591 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 53650 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 53651 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 53710 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 53711 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 53770 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 53771 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 53830 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 53831 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 53890 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 53891 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 53950 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 548 |||||||| || ||| | ||| |||||||||| |||||||||||||| Sbjct: 53951 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 54000 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 547 ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 606 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 54128 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 54187 Query: 607 ctttccatcagggctcagtgatgtatg 633 ||||| ||||| |||| || |||||| Sbjct: 54188 ctttctgtcaggactcaatgctgtatg 54214 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 230 gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 289 ||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 65912 gtgtctgggctgaaagacattccagatatctgaccgaagaagtccagctcttgccttctg 65971 Query: 290 ttgta 294 ||||| Sbjct: 65972 ttgta 65976 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 160 gttatacaggcgcccaaactggaggaggctaccatacgttctatcccacac 210 ||||||||| || |||||||||||||||| ||||| |||||||||||||| Sbjct: 64186 gttatacagacggtcaaactggaggaggctgccatatgttctatcccacac 64236 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 attcactggccaatcaaactgaaagtgcttg 664 |||||||||||| ||||||||||| |||||| Sbjct: 54556 attcactggccattcaaactgaaaatgcttg 54586
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 337 bits (170), Expect = 3e-89 Identities = 350/410 (85%) Strand = Plus / Plus Query: 139 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 198 |||||||||| ||||| | | |||||||| || ||||||||||||||||| || || || Sbjct: 110280 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 110339 Query: 199 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 258 |||||||||||| || || ||||| ||| |||||||||||||| ||||| |||||||| Sbjct: 110340 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 110399 Query: 259 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 318 |||||||||||||||||||||||||||||| |||| || ||| |||||||||| ||| Sbjct: 110400 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 110459 Query: 319 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 378 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| || Sbjct: 110460 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 110519 Query: 379 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 438 ||| ||||||||||||||||| |||| ||||||| | ||| || || |||| ||| || Sbjct: 110520 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 110579 Query: 439 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 498 ||| || ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| Sbjct: 110580 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 110639 Query: 499 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 548 |||||||| || ||| | ||| |||||||||| |||||||||||||| Sbjct: 110640 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 110689 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 547 ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 606 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 110817 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 110876 Query: 607 ctttccatcagggctcagtgatgtatg 633 ||||| ||||| |||| || |||||| Sbjct: 110877 ctttctgtcaggactcaatgctgtatg 110903 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 634 attcactggccaatcaaactgaaagtgcttg 664 |||||||||||| ||||||||||| |||||| Sbjct: 111245 attcactggccattcaaactgaaaatgcttg 111275
>gb|BT016291.1| Zea mays clone Contig124 mRNA sequence Length = 687 Score = 268 bits (135), Expect = 2e-68 Identities = 324/387 (83%) Strand = Plus / Minus Query: 133 tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 192 ||||| ||| |||||| ||||| | | ||| | |||||| ||||| || || ||||| || Sbjct: 390 tcaaaacagggagtcaagatacgagtagttgtccaggcggccaaattgtagcaggctgcc 331 Query: 193 atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 252 |||| | |||||||||| || |||||||| | ||| ||||| |||||||| || | || Sbjct: 330 atacatcgtatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtgcc 271 Query: 253 agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 312 |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| | Sbjct: 270 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 211 Query: 313 gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 372 |||||||||||||| || ||||| ||||| |||| |||||| || ||||| |||||||| Sbjct: 210 aatgtgcacaaagtcagcaggttcagccatggacatgaactggccatccgaggtgaagcg 151 Query: 373 gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 432 ||| || | ||||||||||||||||| |||| |||||||| | ||| || |||||||| Sbjct: 150 gatggaccggatggctccaaggttacccctcaacacatggacggattttgagaggttcct 91 Query: 433 cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 492 | ||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 90 cacgtcccaaattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatcagg 31 Query: 493 gctccaggctgatgcgaatgagaagtc 519 |||||| || ||||| |||||| |||| Sbjct: 30 gctccaagccgatgcaaatgagtagtc 4
>gb|AY108826.1| Zea mays PCO135885 mRNA sequence Length = 614 Score = 73.8 bits (37), Expect = 7e-10 Identities = 148/185 (80%) Strand = Plus / Minus Query: 230 gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 289 ||||| |||||||||||||| || |||| ||| |||||||| |||| || || || | Sbjct: 354 gtgtcggggctgaaggacataccggatacctcgccaaagaaatccaattcctgtctctta 295 Query: 290 ttgtagtcgctcttcacatcgaagatgtgcacaaagtccgctggttccgccatcgacagg 349 |||||||| || || | || |||||||| |||||||| |||| ||| |||||||||| | Sbjct: 294 ttgtagtcacttttgatgtcaaagatgtggacaaagtctgctgcttctgccatcgacaag 235 Query: 350 aactgcccgtccgacgtgaagcggatcgatctaatggctccaaggttacctttcaataca 409 || |||||||| || || || || || ||||| || ||||||| ||| ||| |||| ||| Sbjct: 234 aagtgcccgtcggatgtaaaacgaatagatcttattgctccaacgttgcctctcaagaca 175 Query: 410 tggac 414 ||||| Sbjct: 174 tggac 170
>ref|XM_483165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1716 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1184 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1125 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 1124 cacgctgacgcgaaagagtagtccagatgacc 1093
>ref|XM_507280.1| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.19 mRNA Length = 1924 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1195 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1136 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 1135 cacgctgacgcgaaagagtagtccagatgacc 1104
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 24571385 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 24571326 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 24571325 cacgctgacgcgaaagagtagtccagatgacc 24571294 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 caccaaagaagtccagctct 280 |||||||||||||||||||| Sbjct: 23204186 caccaaagaagtccagctct 23204205 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 caccaaagaagtccagctct 280 |||||||||||||||||||| Sbjct: 19180264 caccaaagaagtccagctct 19180245
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 79645 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 79586 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 79585 cacgctgacgcgaaagagtagtccagatgacc 79554
>dbj|AK121435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140A17, full insert sequence Length = 1924 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1195 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1136 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 1135 cacgctgacgcgaaagagtagtccagatgacc 1104
>dbj|AK112033.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C09, full insert sequence Length = 1716 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 437 tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 496 |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1184 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1125 Query: 497 caggctgatgcgaatgagaagtcatgatgacc 528 || ||||| ||||| ||| |||| ||||||| Sbjct: 1124 cacgctgacgcgaaagagtagtccagatgacc 1093
>gb|BT013486.1| Lycopersicon esculentum clone 132170R, mRNA sequence Length = 1978 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 571 taaaccattaggatcatcccccacaataacaacaagctttccatcagggctcagtgatgt 630 |||||| | ||||| |||||| || || ||| |||||| ||||| ||||||||||||| Sbjct: 1126 taaaccttcaggattatccccaactattgcaataagcttgccatcggggctcagtgatgc 1067 Query: 631 atgattcactggcca 645 ||||||||||||||| Sbjct: 1066 atgattcactggcca 1052
>gb|AY110591.1| Zea mays CL28492_1 mRNA sequence Length = 796 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Plus Query: 257 atctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatg 316 ||||||||||||||||||||||| ||| | || |||| | |||| |||||||||||| Sbjct: 457 atctcaccaaagaagtccagctcctgcttcctgctgtacccactctcaacatcgaagatg 516 Query: 317 tgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatc 376 || | |||||||| ||||| | ||||| || ||||| |||||| | |||| |||| ||| Sbjct: 517 tggatgaagtccgcgggttcagtcatcgccatgaacttcccgtctggcgtgtagcgaatc 576 Query: 377 ga 378 || Sbjct: 577 ga 578 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Plus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggcc 486 ||||||||| | ||| ||||||||||||||||| || || ||||||||||| Sbjct: 635 cgtcccagaccctgcacgtcttgtcttggttccccgtggcgaatgttcggcc 686
>gb|BT014346.1| Lycopersicon esculentum clone 133621F, mRNA sequence Length = 1664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 436 gtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggct 495 |||||| ||||| || || |||||||| |||||||| ||||| || |||||||||||| Sbjct: 1115 gtcccaaattcgacaggttttgtcttgattcccagtggcaaaggtacggccatcagggtg 1056 Query: 496 ccaggctgatgcgaa 510 |||||| || ||||| Sbjct: 1055 ccaggcagacgcgaa 1041
>ref|NM_125002.2| Arabidopsis thaliana unknown protein AT5G56190 transcript variant AT5G56190.2 mRNA, complete cds Length = 1777 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1257 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1198 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1197 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1161
>ref|NM_180868.2| Arabidopsis thaliana unknown protein AT5G56190 transcript variant AT5G56190.1 mRNA, complete cds Length = 1695 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1175 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1116 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1115 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1079
>gb|BT015617.1| Arabidopsis thaliana At5g56190 mRNA sequence Length = 1341 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1089 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1030 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1029 acgacaggtcttgtcttggtttcctgtggcaaatgtt 993
>gb|AY122989.1| Arabidopsis thaliana putative WD-repeat protein (At5g56190) mRNA, complete cds Length = 1357 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1074 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1015 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1014 acgacaggtcttgtcttggtttcctgtggcaaatgtt 978
>gb|AY080763.1| Arabidopsis thaliana putative WD-repeat protein (At5g56190) mRNA, complete cds Length = 1637 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1148 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1089 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1088 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1052
>emb|BX831656.1|CNS09ZQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1599 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1175 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1116 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 1115 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1079
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 50.1 bits (25), Expect = 0.010 Identities = 79/97 (81%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 78977 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 78918 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||||| || || ||||||||| Sbjct: 78917 acgacaggtcttgtcttggtttcctgtggcaaatgtt 78881
>ref|XM_493960.1| Oryza sativa (japonica cultivar-group), Ozsa8025 predicted mRNA Length = 1425 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 1123 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 1065
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 3637907 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 3637849
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 32135 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 32077
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 129744 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 129686
>dbj|AK105084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H01, full insert sequence Length = 1171 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 652 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 594
>dbj|AK100886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128H22, full insert sequence Length = 1958 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 435 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 493 ||||||||| ||||| |||||||||||||| || || || || || |||||||||||| Sbjct: 1420 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 1362
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 217 gaaaagggcgtctgtgtccgggctgaaggacatcccagatatctcaccaaa 267 |||||||| || |||||||| ||||| || || ||||||||||||||||| Sbjct: 42747 gaaaagggattcagtgtccggactgaaagagatgccagatatctcaccaaa 42797 Score = 44.1 bits (22), Expect = 0.60 Identities = 37/42 (88%) Strand = Plus / Plus Query: 436 gtcccagattcggcatgtcttgtcttggttcccagtagcaaa 477 |||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 42966 gtcccaaattcggcaggttttgtcctggtttccagtagcaaa 43007
>gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete sequence Length = 139216 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 434 gcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatg 479 |||||||| | || ||||||||||||||| ||||| ||||| |||| Sbjct: 8523 gcgtcccatactctgcatgtcttgtcttgattcccggtagcgaatg 8478
>gb|AC116708.19| Mus musculus chromosome 1, clone RP23-70F22, complete sequence Length = 214263 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 tgaaggacatcccagatatctcacca 265 ||||||| |||||||||||||||||| Sbjct: 67736 tgaaggaaatcccagatatctcacca 67711
>gb|AY344981.1| Sporisorium lepturi internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 673 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gtccagctcttgccttctctt 291 ||||||||||||||||||||| Sbjct: 555 gtccagctcttgccttctctt 535
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tccagctcttgccttctcttgtagt 296 ||||||| ||||||||||||||||| Sbjct: 78679 tccagctgttgccttctcttgtagt 78655
>gb|AY084494.1| Arabidopsis thaliana clone 109499 mRNA, complete sequence Length = 1597 Score = 42.1 bits (21), Expect = 2.4 Identities = 78/97 (80%) Strand = Plus / Minus Query: 385 ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 444 |||||||||||||||||| | ||| ||||| || ||| || ||||| | |||||| || Sbjct: 1257 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1198 Query: 445 tcggcatgtcttgtcttggttcccagtagcaaatgtt 481 || || |||||||||||| | || || ||||||||| Sbjct: 1197 acgacaggtcttgtcttggcttcctgtggcaaatgtt 1161
>gb|AY740160.1| Sporisorium lepturi internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gtccagctcttgccttctctt 291 ||||||||||||||||||||| Sbjct: 603 gtccagctcttgccttctctt 583
>gb|AC006263.1|AC006263 Homo sapiens chromosome 17, clone hCIT.187_K_10, complete sequence Length = 94742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ccagatatctcaccaaagaag 271 ||||||||||||||||||||| Sbjct: 48132 ccagatatctcaccaaagaag 48112
>gb|AC012085.4| Homo sapiens 12 BAC RP11-887P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170269 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 157429 cagatatctcaccaaagaag 157410
>emb|BX088563.4| Human DNA sequence from clone RP11-1066D24 on chromosome X, complete sequence Length = 97771 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 21811 cagatatctcaccaaagaag 21792
>emb|AL589993.5| Human DNA sequence from clone RP11-57K17 on chromosome 6 Contains the 3' end of the gene for serologically defined breast cancer antigen NY-BR-15 (LOC221312) and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 (DDX24) pseudogene, complete sequence Length = 96246 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 72235 cagatatctcaccaaagaag 72254
>emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on chromosome 13 Contains a novel heterogeneous nuclear ribonucleoprotein family A protein and a novel gene, complete sequence Length = 168897 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 161542 cagatatctcaccaaagaag 161561
>emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chromosome 11p12-14.1 Contains STSs, complete sequence Length = 143321 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 140989 cagatatctcaccaaagaag 140970
>emb|AL133406.14| Human DNA sequence from clone RP3-355L5 on chromosome 6q16.3-21 Contains the 3' end of the PREP gene for prolyl endopeptidase, a ribosomal protein L7 (RPL7) pseudogene, a ribosomal protein L35 (RPL35) pseudogene and a putative novel gene (FLJ32396), complete sequence Length = 103421 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 55928 cagatatctcaccaaagaag 55909
>emb|AL049762.20|HSDJ81F6 Human DNA sequence from clone RP1-81F6 on chromosome 1q24.1-25.2 Contains the 5' end of the gene for HBxAg transactivated protein 2 (XTP2), complete sequence Length = 100575 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 58859 cagatatctcaccaaagaag 58878
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caccaaccattcggtgcagc 88 |||||||||||||||||||| Sbjct: 96472 caccaaccattcggtgcagc 96491
>emb|BX647084.1|HSM807228 Homo sapiens mRNA; cDNA DKFZp686O14166 (from clone DKFZp686O14166) Length = 4918 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 4800 cagatatctcaccaaagaag 4781
>ref|NG_002423.1| Homo sapiens CD8b molecule pseudogene (CD8BP) on chromosome 2 Length = 20483 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 catgatgacctttcatggaa 538 |||||||||||||||||||| Sbjct: 18897 catgatgacctttcatggaa 18916
>gb|AC100767.2| Homo sapiens chromosome 11, clone RP11-787P24, complete sequence Length = 170435 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 146474 cagatatctcaccaaagaag 146455
>gb|U91376.1| Culex restuans Mosquito.3 mariner transposase gene, partial cds Length = 454 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttattaatttgaattatgca 21 |||||||||||||||||||| Sbjct: 297 ttattaatttgaattatgca 316
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 catgatgacctttcatggaa 538 |||||||||||||||||||| Sbjct: 9188 catgatgacctttcatggaa 9169
>gb|AC108868.4| Homo sapiens BAC clone RP11-448J14 from 2, complete sequence Length = 109290 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 catgatgacctttcatggaa 538 |||||||||||||||||||| Sbjct: 33863 catgatgacctttcatggaa 33882
>gb|AC018717.11| Homo sapiens BAC clone RP11-505H14 from 2, complete sequence Length = 172639 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 32311 cagatatctcaccaaagaag 32330
>gb|AC108739.8| Homo sapiens 3 BAC RP11-481M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96205 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cagatatctcaccaaagaag 271 |||||||||||||||||||| Sbjct: 67536 cagatatctcaccaaagaag 67517
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 caccaaagaagtccagctct 280 |||||||||||||||||||| Sbjct: 127285 caccaaagaagtccagctct 127304
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 caccaaagaagtccagctct 280 |||||||||||||||||||| Sbjct: 3537 caccaaagaagtccagctct 3556
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 caccaaagaagtccagctct 280 |||||||||||||||||||| Sbjct: 102629 caccaaagaagtccagctct 102610
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 atcgacaggaactgcccgtccgac 364 |||||||||||||||||| ||||| Sbjct: 1825553 atcgacaggaactgcccgaccgac 1825530
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cccgtccgacgtgaagcgga 374 |||||||||||||||||||| Sbjct: 885754 cccgtccgacgtgaagcgga 885735
>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete sequence Length = 142565 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 aagagtctttcctgaattgg 560 |||||||||||||||||||| Sbjct: 90237 aagagtctttcctgaattgg 90256
>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete sequence Length = 205436 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 gagaagtcatgatgaccttt 531 |||||||||||||||||||| Sbjct: 7484 gagaagtcatgatgaccttt 7503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,043,180 Number of Sequences: 3902068 Number of extensions: 5043180 Number of successful extensions: 87754 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87459 Number of HSP's gapped (non-prelim): 272 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)