Clone Name	rbasd23e06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	113	8e-22
2	dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D...	113	8e-22
3	dbj|AK101986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	113	8e-22
4	dbj|AK060430.1| Oryza sativa (japonica cultivar-group) cDNA clon...	113	8e-22
5	ref|NM_186171.1| Oryza sativa (japonica cultivar-group), mRNA	109	1e-20
6	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
7	dbj|AK064533.1| Oryza sativa (japonica cultivar-group) cDNA clon...	109	1e-20
8	dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
9	gb|AY107216.1| Zea mays PCO114058 mRNA sequence	56	2e-04
10	gb|BT012928.1| Lycopersicon esculentum clone 114091F, mRNA sequence	52	0.002
11	ref|XM_632556.1| Dictyostelium discoideum homeodomain (HOX) cont...	44	0.61
12	gb|AC101542.19| Mus musculus chromosome 19, clone RP23-456B17, c...	42	2.4
13	ref|XM_752432.1| Ustilago maydis 521 hypothetical protein (UM013...	42	2.4
14	gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, compl...	42	2.4
15	emb|AL445431.16| Human DNA sequence from clone RP11-365J16 on ch...	42	2.4
16	gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complet...	42	2.4
17	gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, c...	42	2.4
18	gb|AC158803.11| Mus musculus 10 BAC RP24-186E11 (Roswell Park Ca...	40	9.5
19	gb|AY686734.1| Toxoplasma gondii nucleolar G-protein NOG1 (NOG1)...	40	9.5
20	gb|BC003580.1| Homo sapiens WD repeat domain 39, mRNA (cDNA clon...	40	9.5
21	gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CI...	40	9.5
22	ref|NM_004804.2| Homo sapiens WD repeat domain 39 (WDR39), mRNA	40	9.5
23	emb|CR456802.1| Homo sapiens full open reading frame cDNA clone ...	40	9.5
24	emb|V01527.1|MMMH04 Mouse gene coding for major histocompatibili...	40	9.5
25	dbj|AK124703.1| Homo sapiens cDNA FLJ42713 fis, clone BRAMY3008088	40	9.5
26	emb|CR605216.1| full-length cDNA clone CS0DJ012YF20 of T cells (...	40	9.5
27	dbj|AK056423.1| Homo sapiens cDNA FLJ31861 fis, clone NT2RP7001319	40	9.5
28	emb|CR593125.1| full-length cDNA clone CS0DL010YB16 of B cells (...	40	9.5
29	emb|CR592447.1| full-length cDNA clone CS0DI064YH12 of Placenta ...	40	9.5
30	gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, comple...	40	9.5
31	gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, compl...	40	9.5
32	ref|XM_684677.1| PREDICTED: Danio rerio similar to Rab6ip1 prote...	40	9.5
33	gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complet...	40	9.5
34	emb|BX571980.6| Zebrafish DNA sequence from clone DKEY-105P15 in...	40	9.5
35	gb|AC026716.5|AC026716 Homo sapiens chromosome 5 clone CTD-2140M...	40	9.5
36	gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 m...	40	9.5
37	gb|BC032812.1| Homo sapiens WD repeat domain 39, mRNA (cDNA clon...	40	9.5
38	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
39	gb|AC093592.3| Homo sapiens BAC clone RP11-50L21 from 4, complet...	40	9.5
40	dbj|AK223257.1| Homo sapiens mRNA for WD40 protein Ciao1 variant...	40	9.5
41	gb|AC084064.6| Homo sapiens chromosome 16 clone RP11-467I17, com...	40	9.5
42	emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 i...	40	9.5
43	dbj|BS000061.1| Pan troglodytes chromosome 22 clone:PTB-027C13, ...	40	9.5
44	dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
45	dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
46	emb|BX663609.29| Zebrafish DNA sequence from clone DKEY-182H7 in...	40	9.5
47	dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	9.5
48	gb|BC001395.2| Homo sapiens WD repeat domain 39, mRNA (cDNA clon...	40	9.5
49	gb|AC006075.1|AC006075 Homo sapiens chromosome 16, BAC clone RPC...	40	9.5
50	emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chr...	40	9.5
51	gb|U63810.1|HSU63810 Homo sapiens WD40 protein Ciao 1 mRNA, comp...	40	9.5
52	gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Loc...	40	9.5
53	emb|BX469893.9| Zebrafish DNA sequence from clone DKEY-252H13 in...	40	9.5
54	dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21...	40	9.5

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                           
Query: 328     cgttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctcca 387
               |||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| || 
Sbjct: 4882202 cgttttccagagaatagatgctttggtttcaaagttggaatgacacgatccgcctcaccg 4882261

                                                                           
Query: 388     cggcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttc 447
               || ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||
Sbjct: 4882262 cgacgagcctccttgttcctgttcctcacagaatccttagctttcttaatcgccttcttc 4882321

                        
Query: 448     ttttgagca 456
               || ||||||
Sbjct: 4882322 ttctgagca 4882330



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 581     cagctctgctcagtgacctctcacgcttacggcctct 617
               |||||||||| ||||||||||||||||| || |||||
Sbjct: 4882464 cagctctgctaagtgacctctcacgcttgcgacctct 4882500

---

>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E04
          Length = 170701

 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                         
Query: 328   cgttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctcca 387
             |||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| || 
Sbjct: 69685 cgttttccagagaatagatgctttggtttcaaagttggaatgacacgatccgcctcaccg 69744

                                                                         
Query: 388   cggcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttc 447
             || ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||
Sbjct: 69745 cgacgagcctccttgttcctgttcctcacagaatccttagctttcttaatcgccttcttc 69804

                      
Query: 448   ttttgagca 456
             || ||||||
Sbjct: 69805 ttctgagca 69813



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 581   cagctctgctcagtgacctctcacgcttacggcctct 617
             |||||||||| ||||||||||||||||| || |||||
Sbjct: 69947 cagctctgctaagtgacctctcacgcttgcgacctct 69983

---

>dbj|AK101986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078P03, full
           insert sequence
          Length = 1181

 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 328 cgttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctcca 387
           |||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| || 
Sbjct: 807 cgttttccagagaatagatgctttggtttcaaagttggaatgacacgatccgcctcaccg 748

                                                                       
Query: 388 cggcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttc 447
           || ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||
Sbjct: 747 cgacgagcctccttgttcctgttcctcacagaatccttagctttcttaatcgccttcttc 688

                    
Query: 448 ttttgagca 456
           || ||||||
Sbjct: 687 ttctgagca 679



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 581 cagctctgctcagtgacctctcacgcttacggcctct 617
           |||||||||| ||||||||||||||||| || |||||
Sbjct: 545 cagctctgctaagtgacctctcacgcttgcgacctct 509

---

>dbj|AK060430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A10, full
           insert sequence
          Length = 1154

 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 328 cgttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctcca 387
           |||||||||||||| |||||||| |||||||| || || ||||| ||||||||||| || 
Sbjct: 741 cgttttccagagaatagatgctttggtttcaaagttggaatgacacgatccgcctcaccg 682

                                                                       
Query: 388 cggcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttc 447
           || ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||
Sbjct: 681 cgacgagcctccttgttcctgttcctcacagaatccttagctttcttaatcgccttcttc 622

                    
Query: 448 ttttgagca 456
           || ||||||
Sbjct: 621 ttctgagca 613



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 581 cagctctgctcagtgacctctcacgcttacggcctct 617
           |||||||||| ||||||||||||||||| || |||||
Sbjct: 479 cagctctgctaagtgacctctcacgcttgcgacctct 443

---

>ref|NM_186171.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2031

 Score =  109 bits (55), Expect = 1e-20
 Identities = 109/127 (85%)
 Strand = Plus / Minus

                                                                        
Query: 330  ttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctccacg 389
            |||||||||||| |||||||| |||||||| || || ||||| || ||||||||||| ||
Sbjct: 2001 ttttccagagaacagatgctttggtttcaaagttggaatgacacggtccgcctctccgcg 1942

                                                                        
Query: 390  gcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttctt 449
             ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||||
Sbjct: 1941 acgagcctccttgttcctgttcctcacagaatccttagctttcttaattgccttcttctt 1882

                   
Query: 450  ttgagca 456
             ||||||
Sbjct: 1881 ctgagca 1875



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                        
Query: 581  cagctctgctcagtgacctctcacgcttacggcctcttgactggctgcgaagccggttga 640
            |||||||||||||||||||||||||||| || ||||| ||| |||||||    ||||  |
Sbjct: 1741 cagctctgctcagtgacctctcacgcttgcgacctctagaccggctgcgggctcggtcca 1682

                                          
Query: 641  cagctgcagtaggatcaacgcccatggatg 670
             ||||||| |||||||||  ||||||||||
Sbjct: 1681 tagctgcactaggatcaaaacccatggatg 1652

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 1e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                          
Query: 330    ttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctccacg 389
              |||||||||||| |||||||| |||||||| || || ||||| || ||||||||||| ||
Sbjct: 558859 ttttccagagaacagatgctttggtttcaaagttggaatgacacggtccgcctctccgcg 558918

                                                                          
Query: 390    gcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttctt 449
               ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||||
Sbjct: 558919 acgagcctccttgttcctgttcctcacagaatccttagctttcttaattgccttcttctt 558978

                     
Query: 450    ttgagca 456
               ||||||
Sbjct: 558979 ctgagca 558985



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 581    cagctctgctcagtgacctctcacgcttacggcctcttgactggctgcgaagccggttga 640
              |||||||||||||||||||||||||||| || ||||| ||| |||||||    ||||  |
Sbjct: 559119 cagctctgctcagtgacctctcacgcttgcgacctctagaccggctgcgggctcggtcca 559178

                                            
Query: 641    cagctgcagtaggatcaacgcccatggatg 670
               ||||||| |||||||||  ||||||||||
Sbjct: 559179 tagctgcactaggatcaaaacccatggatg 559208

---

>dbj|AK064533.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H06, full
            insert sequence
          Length = 1424

 Score =  109 bits (55), Expect = 1e-20
 Identities = 109/127 (85%)
 Strand = Plus / Minus

                                                                        
Query: 330  ttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctccacg 389
            |||||||||||| |||||||| |||||||| || || ||||| || ||||||||||| ||
Sbjct: 1031 ttttccagagaacagatgctttggtttcaaagttggaatgacacggtccgcctctccgcg 972

                                                                        
Query: 390  gcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttctt 449
             ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||||
Sbjct: 971  acgagcctccttgttcctgttcctcacagaatccttagctttcttaattgccttcttctt 912

                   
Query: 450  ttgagca 456
             ||||||
Sbjct: 911  ctgagca 905



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 581 cagctctgctcagtgacctctcacgcttacggcctcttgactggctgcgaagccggttga 640
           |||||||||||||||||||||||||||| || ||||| ||| |||||||    ||||  |
Sbjct: 771 cagctctgctcagtgacctctcacgcttgcgacctctagaccggctgcgggctcggtcca 712

                                         
Query: 641 cagctgcagtaggatcaacgcccatggatg 670
            ||||||| |||||||||  ||||||||||
Sbjct: 711 tagctgcactaggatcaaaacccatggatg 682

---

>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1567_G09
          Length = 121388

 Score =  109 bits (55), Expect = 1e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                          
Query: 330    ttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctccacg 389
              |||||||||||| |||||||| |||||||| || || ||||| || ||||||||||| ||
Sbjct: 112771 ttttccagagaacagatgctttggtttcaaagttggaatgacacggtccgcctctccgcg 112830

                                                                          
Query: 390    gcgagcctccttgttcctgttcttgacagagtcccttgatttcttgatggccttcttctt 449
               ||||||||||||||||||||| | ||||| ||| | | |||||| || |||||||||||
Sbjct: 112831 acgagcctccttgttcctgttcctcacagaatccttagctttcttaattgccttcttctt 112890

                     
Query: 450    ttgagca 456
               ||||||
Sbjct: 112891 ctgagca 112897



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 581    cagctctgctcagtgacctctcacgcttacggcctcttgactggctgcgaagccggttga 640
              |||||||||||||||||||||||||||| || ||||| ||| |||||||    ||||  |
Sbjct: 113031 cagctctgctcagtgacctctcacgcttgcgacctctagaccggctgcgggctcggtcca 113090

                                            
Query: 641    cagctgcagtaggatcaacgcccatggatg 670
               ||||||| |||||||||  ||||||||||
Sbjct: 113091 tagctgcactaggatcaaaacccatggatg 113120

---

>gb|AY107216.1| Zea mays PCO114058 mRNA sequence
          Length = 1442

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                        
Query: 328  cgttttccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctcca 387
            ||||| ||||| || | |||||| ||||| || ||||| || || || || |||||||||
Sbjct: 1123 cgtttcccagaaaacaaatgctttggttttaaagtgggaataacacggtcagcctctcca 1064

                                    
Query: 388  cggcgagcctccttgttcctgttc 411
            || ||||| |||||||||||||||
Sbjct: 1063 cgacgagcttccttgttcctgttc 1040



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 581 cagctctgctcagtgacctctcacgcttacggcctcttgactggctgcgaa 631
           |||||||||||| ||||||||||||||| || || || ||||| |||||||
Sbjct: 861 cagctctgctcactgacctctcacgcttgcgacccctagactgactgcgaa 811

---

>gb|BT012928.1| Lycopersicon esculentum clone 114091F, mRNA sequence
          Length = 2544

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 334  ccagagaagagatgcttcggtttcaacgtggggatgacgcgatccgcctctccacggcga 393
            |||||||||||||| ||||||||||  || || ||||| | ||| | |||||| || |||
Sbjct: 2098 ccagagaagagatgtttcggtttcagagtaggaatgactctatcggactctccccgacga 2039

                          
Query: 394  gcctccttgttcct 407
            || |||||||||||
Sbjct: 2038 gcatccttgttcct 2025

---

>ref|XM_632556.1| Dictyostelium discoideum homeodomain (HOX) containing protein
           (DDB0220477), partial mRNA
          Length = 2541

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 24  gttcaaatacattaacaacaccatca 49
           |||||||||||||| |||||||||||
Sbjct: 245 gttcaaatacattatcaacaccatca 270

---

>gb|AC101542.19| Mus musculus chromosome 19, clone RP23-456B17, complete sequence
          Length = 165781

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 415    acagagtcccttgatttcttgatgg 439
              |||||||||||||||||||| ||||
Sbjct: 155690 acagagtcccttgatttctttatgg 155666

---

>ref|XM_752432.1| Ustilago maydis 521 hypothetical protein (UM01378.1) partial mRNA
          Length = 4293

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 518  tcgaccttgtacgcagcttct 538
            |||||||||||||||||||||
Sbjct: 2770 tcgaccttgtacgcagcttct 2790

---

>gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, complete sequence
          Length = 180560

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 415    acagagtcccttgatttcttgatgg 439
              |||||||||||||||||||| ||||
Sbjct: 115087 acagagtcccttgatttctttatgg 115111

---

>emb|AL445431.16| Human DNA sequence from clone RP11-365J16 on chromosome 10 Contains the
              5' end of the DNAJC1 gene for DnaJ (Hsp40) homolog,
              subfamily C, member 1 (DNAJL1) and a CpG island, complete
              sequence
          Length = 138653

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 572    tgtcaccatcagctctgctca 592
              |||||||||||||||||||||
Sbjct: 136166 tgtcaccatcagctctgctca 136146

---

>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence
          Length = 192263

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 379    gcctctccacggcgagcctccttgttcct 407
              |||||||||||| | ||||||||||||||
Sbjct: 121923 gcctctccacggagcgcctccttgttcct 121951

---

>gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, complete sequence
          Length = 202768

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 415   acagagtcccttgatttcttgatgg 439
             |||||||||||||||||||| ||||
Sbjct: 11964 acagagtcccttgatttctttatgg 11988

---

>gb|AC158803.11| Mus musculus 10 BAC RP24-186E11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 168941

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   ctcgttttccagagaagaga 345
             ||||||||||||||||||||
Sbjct: 98192 ctcgttttccagagaagaga 98211

---

>gb|AY686734.1| Toxoplasma gondii nucleolar G-protein NOG1 (NOG1) mRNA, complete cds
          Length = 3167

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  tttccagagaagagatgctt 350
            ||||||||||||||||||||
Sbjct: 2778 tttccagagaagagatgctt 2759

---

>gb|BC003580.1| Homo sapiens WD repeat domain 39, mRNA (cDNA clone IMAGE:3544027),
            **** WARNING: chimeric clone ****
          Length = 2894

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gtggggatgacgcgatccgc 380
            ||||||||||||||||||||
Sbjct: 2461 gtggggatgacgcgatccgc 2480

---

>gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-319E8, complete sequence
          Length = 153773

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    gtggggatgacgcgatccgc 380
              ||||||||||||||||||||
Sbjct: 101610 gtggggatgacgcgatccgc 101591

---

>ref|NM_004804.2| Homo sapiens WD repeat domain 39 (WDR39), mRNA
          Length = 4053

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gtggggatgacgcgatccgc 380
            ||||||||||||||||||||
Sbjct: 1017 gtggggatgacgcgatccgc 1036

---

>emb|CR456802.1| Homo sapiens full open reading frame cDNA clone RZPDo834A1118D for
           gene CIAO1, WD40 protein Ciao1; complete cds, incl.
           stopcodon
          Length = 1020

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 812 gtggggatgacgcgatccgc 831

---

>emb|V01527.1|MMMH04 Mouse gene coding for major histocompatibility antigen. This is a
            class II antigen, I-A-beta
          Length = 10000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  tcaccatcagctctgctcag 593
            ||||||||||||||||||||
Sbjct: 1104 tcaccatcagctctgctcag 1085

---

>dbj|AK124703.1| Homo sapiens cDNA FLJ42713 fis, clone BRAMY3008088
          Length = 3612

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 620 gtggggatgacgcgatccgc 639

---

>emb|CR605216.1| full-length cDNA clone CS0DJ012YF20 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1284

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 894 gtggggatgacgcgatccgc 913

---

>dbj|AK056423.1| Homo sapiens cDNA FLJ31861 fis, clone NT2RP7001319
          Length = 3902

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gtggggatgacgcgatccgc 380
            ||||||||||||||||||||
Sbjct: 1383 gtggggatgacgcgatccgc 1402

---

>emb|CR593125.1| full-length cDNA clone CS0DL010YB16 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1049

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 636 gtggggatgacgcgatccgc 655

---

>emb|CR592447.1| full-length cDNA clone CS0DI064YH12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1210

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 829 gtggggatgacgcgatccgc 848

---

>gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, complete sequence
          Length = 192573

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 429    tttcttgatggccttcttcttttg 452
              ||||||||||||||| ||||||||
Sbjct: 107095 tttcttgatggcctttttcttttg 107118

---

>gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, complete sequence
          Length = 133225

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 574   tcaccatcagctctgctcagtgac 597
             ||||||||||||||| ||||||||
Sbjct: 95088 tcaccatcagctctggtcagtgac 95111

---

>ref|XM_684677.1| PREDICTED: Danio rerio similar to Rab6ip1 protein (LOC561275), mRNA
          Length = 1986

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   atctgactccgctccgcact 75
            ||||||||||||||||||||
Sbjct: 1676 atctgactccgctccgcact 1657

---

>gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complete sequence
          Length = 236486

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  gtggggatgacgcgatccgc 380
            ||||||||||||||||||||
Sbjct: 5563 gtggggatgacgcgatccgc 5582

---

>emb|BX571980.6| Zebrafish DNA sequence from clone DKEY-105P15 in linkage group 14,
            complete sequence
          Length = 102306

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   atctgactccgctccgcact 75
            ||||||||||||||||||||
Sbjct: 4114 atctgactccgctccgcact 4133

---

>gb|AC026716.5|AC026716 Homo sapiens chromosome 5 clone CTD-2140M5, complete sequence
          Length = 115383

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 574    tcaccatcagctctgctcagtgac 597
              ||||||||||||||| ||||||||
Sbjct: 113184 tcaccatcagctctggtcagtgac 113207

---

>gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 map 21q21, complete sequence
          Length = 177273

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ggaaaggaaaacaagaggcc 22
              ||||||||||||||||||||
Sbjct: 110486 ggaaaggaaaacaagaggcc 110467

---

>gb|BC032812.1| Homo sapiens WD repeat domain 39, mRNA (cDNA clone MGC:45274
           IMAGE:5219740), complete cds
          Length = 1351

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 911 gtggggatgacgcgatccgc 930

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   cacctggtacgacctcttca 492
             ||||||||||||||||||||
Sbjct: 62462 cacctggtacgacctcttca 62443

---

>gb|AC093592.3| Homo sapiens BAC clone RP11-50L21 from 4, complete sequence
          Length = 184533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 429    tttcttgatggccttcttcttttg 452
              ||||||||||||||| ||||||||
Sbjct: 146235 tttcttgatggcctttttcttttg 146258

---

>dbj|AK223257.1| Homo sapiens mRNA for WD40 protein Ciao1 variant, clone: STM06949
          Length = 1812

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 938 gtggggatgacgcgatccgc 957

---

>gb|AC084064.6| Homo sapiens chromosome 16 clone RP11-467I17, complete sequence
          Length = 189897

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   aaatggcagtgattctgcag 254
             ||||||||||||||||||||
Sbjct: 47695 aaatggcagtgattctgcag 47676

---

>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5,
              complete sequence
          Length = 162019

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     aacaacaccatcaaacaaaa 56
              ||||||||||||||||||||
Sbjct: 132673 aacaacaccatcaaacaaaa 132654

---

>dbj|BS000061.1| Pan troglodytes chromosome 22 clone:PTB-027C13, map 22, complete
             sequences
          Length = 164304

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ggaaaggaaaacaagaggcc 22
             ||||||||||||||||||||
Sbjct: 73517 ggaaaggaaaacaagaggcc 73498

---

>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1370C05
          Length = 148271

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   cacctggtacgacctcttca 492
             ||||||||||||||||||||
Sbjct: 57071 cacctggtacgacctcttca 57052

---

>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1435_F07
          Length = 139041

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   cacctggtacgacctcttca 492
             ||||||||||||||||||||
Sbjct: 11489 cacctggtacgacctcttca 11470

---

>emb|BX663609.29| Zebrafish DNA sequence from clone DKEY-182H7 in linkage group 7,
             complete sequence
          Length = 248960

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   tttccagagaagagatgctt 350
             ||||||||||||||||||||
Sbjct: 48614 tttccagagaagagatgctt 48633

---

>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ggaaaggaaaacaagaggcc 22
              ||||||||||||||||||||
Sbjct: 335022 ggaaaggaaaacaagaggcc 335003

---

>gb|BC001395.2| Homo sapiens WD repeat domain 39, mRNA (cDNA clone MGC:1983
           IMAGE:3050587), complete cds
          Length = 1315

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 881 gtggggatgacgcgatccgc 900

---

>gb|AC006075.1|AC006075 Homo sapiens chromosome 16, BAC clone RPCI-11_192K18 , complete
            sequence
          Length = 169765

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gcctgctggtcttcccaatt 324
            ||||||||||||||||||||
Sbjct: 8910 gcctgctggtcttcccaatt 8929

---

>emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chromosome 17, complete
              sequence
          Length = 189049

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 574    tcaccatcagctctgctcag 593
              ||||||||||||||||||||
Sbjct: 129151 tcaccatcagctctgctcag 129132

---

>gb|U63810.1|HSU63810 Homo sapiens WD40 protein Ciao 1 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gtggggatgacgcgatccgc 380
           ||||||||||||||||||||
Sbjct: 968 gtggggatgacgcgatccgc 987

---

>gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Locus class II region
          Length = 138187

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   tcaccatcagctctgctcag 593
             ||||||||||||||||||||
Sbjct: 96885 tcaccatcagctctgctcag 96866

---

>emb|BX469893.9| Zebrafish DNA sequence from clone DKEY-252H13 in linkage group 5,
             complete sequence
          Length = 159139

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aacaacaccatcaaacaaaa 56
             ||||||||||||||||||||
Sbjct: 91409 aacaacaccatcaaacaaaa 91390

---

>dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B66B12,
              LL56-APP region, complete sequence
          Length = 173915

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ggaaaggaaaacaagaggcc 22
              ||||||||||||||||||||
Sbjct: 157615 ggaaaggaaaacaagaggcc 157596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,827,707
Number of Sequences: 3902068
Number of extensions: 5827707
Number of successful extensions: 107839
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107640
Number of HSP's gapped (non-prelim): 199
length of query: 691
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 668
effective length of database: 17,143,297,704
effective search space: 11451722866272
effective search space used: 11451722866272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---