ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
2dbj|AK061155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 174 2e-40
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 174 2e-40
6gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence 78 4e-11
7ref|NM_120375.2| Arabidopsis thaliana catalytic AT5G02970 mRNA, ... 62 3e-06
8emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, B... 62 3e-06
9emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BA... 62 3e-06
10gb|AF361600.1| Arabidopsis thaliana AT5g02970/F9G14_280 mRNA, co... 62 3e-06
11gb|BT006349.1| Arabidopsis thaliana At5g02970/F9G14_280 gene, co... 62 3e-06
12ref|NM_001035588.1| Arabidopsis thaliana hydrolase AT3G09690 tra... 56 2e-04
13ref|NM_111803.2| Arabidopsis thaliana hydrolase AT3G09690 transc... 56 2e-04
14gb|BT011759.1| Arabidopsis thaliana At3g09690 gene, complete cds 56 2e-04
15gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11... 56 2e-04
16emb|BX822575.1|CNS0A5XL Arabidopsis thaliana Full-length cDNA Co... 48 0.038
17gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete se... 44 0.59
18emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on ch... 44 0.59
19ref|XM_526460.1| PREDICTED: Pan troglodytes similar to RAB6B, me... 42 2.3
20gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Can... 42 2.3
21dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 2.3
22ref|XM_449988.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
23ref|XM_449989.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
24gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome... 40 9.2
25gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complet... 40 9.2
26emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chr... 40 9.2
27emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chr... 40 9.2
28gb|AC093014.11| Homo sapiens 12 BAC RP11-734E19 (Roswell Park Ca... 40 9.2
29dbj|AK073983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
30emb|CR762386.16| Zebrafish DNA sequence from clone CH211-243A15 ... 40 9.2
31gb|AF189720.1|AF189720 Oryctolagus cuniculus chloride channel (C... 40 9.2
32dbj|AK065455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
33dbj|AK059327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
34dbj|AK058682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
35emb|AL929146.10| Zebrafish DNA sequence from clone CH211-117A23,... 40 9.2 
>dbj|AK100369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084A05, full
            insert sequence
          Length = 2234

 Score =  250 bits (126), Expect = 5e-63
 Identities = 240/278 (86%)
 Strand = Plus / Minus

                                                                        
Query: 393  acttcactgggttccggtacagggtttagagggccctgcggggtgccaaacagggtggag 452
            |||||| ||||||| ||||||||||| | ||||||||| ||  | |||||||||||||||
Sbjct: 1699 acttcaatgggttctggtacagggttgatagggccctgaggaatcccaaacagggtggag 1640

                                                                        
Query: 453  aatatctgccggtggcactcatcgcagaaacagaagtacgagaagtggccttcgtcgaga 512
            || ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1639 aagatctgcctgtggcactcgtcgcagaaacagaagtacgagaagtggccttcatcgaga 1580

                                                                        
Query: 513  agcttgtggacggtggctcctggaaccatcctccgggcaaattcggtcgccgacgggggc 572
            || ||||| || |||||||||||||||| || || | |  |||| ||  | ||||| |||
Sbjct: 1579 agtttgtgcactgtggctcctggaaccacccgcctgacgtattcagtaactgacggtggc 1520

                                                                        
Query: 573  accacccgatcgtccattccctgccaaatgtggattgggcctagaaatcccacccactct 632
            |||||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| 
Sbjct: 1519 accacccggtcatccatcccctgccatatgtgtattgggcccagaaatcccacccactcc 1460

                                                  
Query: 633  cgctcagcctgactgaacagagacttgataaattcaaa 670
            || |||||||||| ||| ||||| ||||| ||||||||
Sbjct: 1459 cgttcagcctgacggaatagagatttgatcaattcaaa 1422
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>dbj|AK061155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F11, full
           insert sequence
          Length = 1324

 Score =  250 bits (126), Expect = 5e-63
 Identities = 240/278 (86%)
 Strand = Plus / Minus

                                                                       
Query: 393 acttcactgggttccggtacagggtttagagggccctgcggggtgccaaacagggtggag 452
           |||||| ||||||| ||||||||||| | ||||||||| ||  | |||||||||||||||
Sbjct: 786 acttcaatgggttctggtacagggttgatagggccctgaggaatcccaaacagggtggag 727

                                                                       
Query: 453 aatatctgccggtggcactcatcgcagaaacagaagtacgagaagtggccttcgtcgaga 512
           || ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 726 aagatctgcctgtggcactcgtcgcagaaacagaagtacgagaagtggccttcatcgaga 667

                                                                       
Query: 513 agcttgtggacggtggctcctggaaccatcctccgggcaaattcggtcgccgacgggggc 572
           || ||||| || |||||||||||||||| || || | |  |||| ||  | ||||| |||
Sbjct: 666 agtttgtgcactgtggctcctggaaccacccgcctgacgtattcagtaactgacggtggc 607

                                                                       
Query: 573 accacccgatcgtccattccctgccaaatgtggattgggcctagaaatcccacccactct 632
           |||||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| 
Sbjct: 606 accacccggtcatccatcccctgccatatgtgtattgggcccagaaatcccacccactcc 547

                                                 
Query: 633 cgctcagcctgactgaacagagacttgataaattcaaa 670
           || |||||||||| ||| ||||| ||||| ||||||||
Sbjct: 546 cgttcagcctgacggaatagagatttgatcaattcaaa 509
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                           
Query: 393     acttcactgggttccggtacagggtttagagggccctgcggggtgccaaacagggtggag 452
               |||||| ||||||| ||||||||||| | ||||||||| ||  | |||||||||||||||
Sbjct: 9949210 acttcaatgggttctggtacagggttgatagggccctgaggaatcccaaacagggtggag 9949151

                                                                           
Query: 453     aatatctgccggtggcactcatcgcagaaacagaagtacgagaagtggccttcgtcgaga 512
               || ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 9949150 aagatctgcctgtggcactcgtcgcagaaacagaagtacgagaagtggccttcatcgaga 9949091

                                           
Query: 513     agcttgtggacggtggctcctggaacca 540
               || ||||| || ||||||||||||||||
Sbjct: 9949090 agtttgtgcactgtggctcctggaacca 9949063



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                           
Query: 592     cctgccaaatgtggattgggcctagaaatcccacccactctcgctcagcctgactgaaca 651
               ||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| ||| |
Sbjct: 9948415 cctgccatatgtgtattgggcccagaaatcccacccactcccgttcagcctgacggaata 9948356

                                  
Query: 652     gagacttgataaattcaaa 670
               |||| ||||| ||||||||
Sbjct: 9948355 gagatttgatcaattcaaa 9948337
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                           
Query: 393     acttcactgggttccggtacagggtttagagggccctgcggggtgccaaacagggtggag 452
               |||||| ||||||| ||||||||||| | ||||||||| ||  | |||||||||||||||
Sbjct: 9947331 acttcaatgggttctggtacagggttgatagggccctgaggaatcccaaacagggtggag 9947272

                                                                           
Query: 453     aatatctgccggtggcactcatcgcagaaacagaagtacgagaagtggccttcgtcgaga 512
               || ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 9947271 aagatctgcctgtggcactcgtcgcagaaacagaagtacgagaagtggccttcatcgaga 9947212

                                           
Query: 513     agcttgtggacggtggctcctggaacca 540
               || ||||| || ||||||||||||||||
Sbjct: 9947211 agtttgtgcactgtggctcctggaacca 9947184



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                           
Query: 592     cctgccaaatgtggattgggcctagaaatcccacccactctcgctcagcctgactgaaca 651
               ||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| ||| |
Sbjct: 9946536 cctgccatatgtgtattgggcccagaaatcccacccactcccgttcagcctgacggaata 9946477

                                  
Query: 652     gagacttgataaattcaaa 670
               |||| ||||| ||||||||
Sbjct: 9946476 gagatttgatcaattcaaa 9946458
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>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                          
Query: 393    acttcactgggttccggtacagggtttagagggccctgcggggtgccaaacagggtggag 452
              |||||| ||||||| ||||||||||| | ||||||||| ||  | |||||||||||||||
Sbjct: 111599 acttcaatgggttctggtacagggttgatagggccctgaggaatcccaaacagggtggag 111540

                                                                          
Query: 453    aatatctgccggtggcactcatcgcagaaacagaagtacgagaagtggccttcgtcgaga 512
              || ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 111539 aagatctgcctgtggcactcgtcgcagaaacagaagtacgagaagtggccttcatcgaga 111480

                                          
Query: 513    agcttgtggacggtggctcctggaacca 540
              || ||||| || ||||||||||||||||
Sbjct: 111479 agtttgtgcactgtggctcctggaacca 111452



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                          
Query: 592    cctgccaaatgtggattgggcctagaaatcccacccactctcgctcagcctgactgaaca 651
              ||||||| ||||| |||||||| ||||||||||||||||| || |||||||||| ||| |
Sbjct: 110804 cctgccatatgtgtattgggcccagaaatcccacccactcccgttcagcctgacggaata 110745

                                 
Query: 652    gagacttgataaattcaaa 670
              |||| ||||| ||||||||
Sbjct: 110744 gagatttgatcaattcaaa 110726
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>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence
          Length = 143300

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 604  ggattgggcctagaaatcccacccactctcgctcagcctgactgaacagagacttgataa 663
            |||||||||| |||||||||||||||||||  | ||||||| |||||||||||||||| |
Sbjct: 1407 ggattgggcccagaaatcccacccactctcttttagcctgattgaacagagacttgatga 1466

                   
Query: 664  attcaaa 670
             ||||||
Sbjct: 1467 gttcaaa 1473
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>ref|NM_120375.2| Arabidopsis thaliana catalytic AT5G02970 mRNA, complete cds
          Length = 1996

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 465  tggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 1665 tggcactcatcgcagaaatagaagaacgagaagtgaccttcgt 1623
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>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA
           project)
          Length = 99008

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 465 tggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
           |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 317 tggcactcatcgcagaaatagaagaacgagaagtgaccttcgt 275
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>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project)
          Length = 104769

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 465   tggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
             |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 92782 tggcactcatcgcagaaatagaagaacgagaagtgaccttcgt 92740
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>gb|AF361600.1| Arabidopsis thaliana AT5g02970/F9G14_280 mRNA, complete cds
          Length = 1996

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 465  tggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 1664 tggcactcatcgcagaaatagaagaacgagaagtgaccttcgt 1622
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>gb|BT006349.1| Arabidopsis thaliana At5g02970/F9G14_280 gene, complete cds
          Length = 1545

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 465  tggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 1439 tggcactcatcgcagaaatagaagaacgagaagtgaccttcgt 1397
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>ref|NM_001035588.1| Arabidopsis thaliana hydrolase AT3G09690 transcript variant
            AT3G09690.2 mRNA, complete cds
          Length = 1968

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 464  gtggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 1582 gtggcactcatcacagagatagaagtaagagaagtggccttcgt 1539
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>ref|NM_111803.2| Arabidopsis thaliana hydrolase AT3G09690 transcript variant
            AT3G09690.1 mRNA, complete cds
          Length = 1984

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 464  gtggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 1598 gtggcactcatcacagagatagaagtaagagaagtggccttcgt 1555
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>gb|BT011759.1| Arabidopsis thaliana At3g09690 gene, complete cds
          Length = 1584

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 464  gtggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||||||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 1449 gtggcactcatcacagagatagaagtaagagaagtggccttcgt 1406
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>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 464   gtggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
             |||||||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 72830 gtggcactcatcacagagatagaagtaagagaagtggccttcgt 72787
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>emb|BX822575.1|CNS0A5XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB4ZD03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1899

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 464  gtggcactcatcgcagaaacagaagtacgagaagtggccttcgt 507
            |||| ||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 1561 gtggtactcatcacagagatagaagtaagagaagtggccttcgt 1518
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>gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete sequence
          Length = 159515

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 438   ccaaacagggtggagaatatctgccggtggcactcatcgcagaaacagaagtacgagaag 497
             ||||| || ||||||||||| |||   ||||| |||||||||||| |||| || ||||||
Sbjct: 52867 ccaaaaagagtggagaatatttgcttatggcattcatcgcagaaaaagaaataggagaag 52808

               
Query: 498   tg 499
             ||
Sbjct: 52807 tg 52806
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>emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on chromosome 2, complete
             sequence
          Length = 142037

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 303   gccaggcctgatgtttcctgct 324
             ||||||||||||||||||||||
Sbjct: 15402 gccaggcctgatgtttcctgct 15423
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>ref|XM_526460.1| PREDICTED: Pan troglodytes similar to RAB6B, member RAS oncogene
           family (LOC471076), mRNA
          Length = 1107

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 84  ggtgcagcagccccccatccagacc 108
           ||||||||||||||||||| |||||
Sbjct: 922 ggtgcagcagccccccatctagacc 898
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>gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 84     ggtgcagcagccccccatccagacc 108
              ||||||||||||||||||| |||||
Sbjct: 106664 ggtgcagcagccccccatctagacc 106640
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      acaatcggtgcagcagccccc 98
               |||||||||||||||||||||
Sbjct: 2139482 acaatcggtgcagcagccccc 2139502
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>ref|XM_449988.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2811

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atgcagggcttgtttcttcc 377
            ||||||||||||||||||||
Sbjct: 994  atgcagggcttgtttcttcc 1013
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>ref|XM_449989.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1562

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 atgcagggcttgtttcttcc 377
           ||||||||||||||||||||
Sbjct: 417 atgcagggcttgtttcttcc 436
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>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence
          Length = 179626

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aaggaaggaaaagcctatct 208
             ||||||||||||||||||||
Sbjct: 61114 aaggaaggaaaagcctatct 61133
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>gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complete sequence
          Length = 194077

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    aaggaaggaaaagcctatct 208
              ||||||||||||||||||||
Sbjct: 163599 aaggaaggaaaagcctatct 163618
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>emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chromosome 9 Contains a
              pseudogene similar to part of dipeptidylpeptidase 3 (DPP3),
              complete sequence
          Length = 183010

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 300    caggccaggcctgatgtttcctgc 323
              ||||||||||||||||| ||||||
Sbjct: 132082 caggccaggcctgatgtctcctgc 132105
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>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the
             Pank3 gene for pantothenate kinase 3, a pseudogene similar
             to part of ribosomal protein L7a (Rpl7a), a pseudogene
             similar to part of fibrillarin (Fbl), the Rars gene for
             arginyl-tRNA synthetase, the 3' end of the gene for a
             novel protein similar to human KIBRA and two CpG islands,
             complete sequence
          Length = 181103

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   caaggaaggaaaagcctatctttt 211
             ||||||||||||| ||||||||||
Sbjct: 70110 caaggaaggaaaaacctatctttt 70133
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>gb|AC093014.11| Homo sapiens 12 BAC RP11-734E19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 97495

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   actgaacagagacttgataa 663
             ||||||||||||||||||||
Sbjct: 13115 actgaacagagacttgataa 13096
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>dbj|AK073983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075C14, full
            insert sequence
          Length = 2811

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atgcagggcttgtttcttcc 377
            ||||||||||||||||||||
Sbjct: 994  atgcagggcttgtttcttcc 1013
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>emb|CR762386.16| Zebrafish DNA sequence from clone CH211-243A15 in linkage group 2,
             complete sequence
          Length = 160796

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ctatcttttctgtgaggtcg 222
             ||||||||||||||||||||
Sbjct: 91086 ctatcttttctgtgaggtcg 91105
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>gb|AF189720.1|AF189720 Oryctolagus cuniculus chloride channel (CFTR) mRNA, complete cds
          Length = 4546

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcttgtatctatactcat 276
            ||||||||||||||||||||
Sbjct: 1657 actcttgtatctatactcat 1638
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>dbj|AK065455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023H14, full
            insert sequence
          Length = 3335

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atgcagggcttgtttcttcc 377
            ||||||||||||||||||||
Sbjct: 984  atgcagggcttgtttcttcc 1003
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>dbj|AK059327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A03, full
            insert sequence
          Length = 1760

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atgcagggcttgtttcttcc 377
            ||||||||||||||||||||
Sbjct: 996  atgcagggcttgtttcttcc 1015
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>dbj|AK058682.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A05, full
           insert sequence
          Length = 1562

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 atgcagggcttgtttcttcc 377
           ||||||||||||||||||||
Sbjct: 417 atgcagggcttgtttcttcc 436
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>emb|AL929146.10| Zebrafish DNA sequence from clone CH211-117A23, complete sequence
          Length = 169102

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ctatcttttctgtgaggtcg 222
              ||||||||||||||||||||
Sbjct: 113408 ctatcttttctgtgaggtcg 113389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,106,974
Number of Sequences: 3902068
Number of extensions: 5106974
Number of successful extensions: 77897
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77775
Number of HSP's gapped (non-prelim): 122
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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