ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd23d23 |
|---|---|
| Clone Library Name | barley_pub |
>IF5_MAIZE (P55876) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 451 Score = 236 bits (602), Expect = 5e-62 Identities = 123/174 (70%), Positives = 146/174 (83%), Gaps = 1/174 (0%) Frame = -3 Query: 697 DGA-NGTAKVEETSNGDQNGAKATPYDELVEEIKASLGNAATAAQVKAVLSSSTLPPKDV 521 DG+ NG+AK E N K +PY+EL+ +IKASLG+A T +Q+KAVL+SSTLPP+DV Sbjct: 278 DGSTNGSAK--EIPNDKPAVTKPSPYEELIGDIKASLGSAPTPSQLKAVLASSTLPPQDV 335 Query: 520 IDALFEALFHGAGKGFAKDVMKNKKYLAAAVPDEAAQMLLLQSIEAFCGKCSAEALKELP 341 ++A EALF G GKGF K+V+KNKKYLA AVPDE AQ LL+Q+IEAF GKC+ EALKE+P Sbjct: 336 MNAPLEALFGGVGKGFTKEVVKNKKYLAVAVPDEGAQTLLVQAIEAFGGKCNPEALKEVP 395 Query: 340 VVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQSAESDEE*D 179 VVLKALYDGD+L+EETIV WY++AVAAGKDSQVVKNAKP VEWLQSAESDEE D Sbjct: 396 VVLKALYDGDILDEETIVDWYNDAVAAGKDSQVVKNAKPFVEWLQSAESDEEGD 449
>IF5Z_ARATH (Q9S825) Probable eukaryotic translation initiation factor 5-2| (eIF-5 2) Length = 437 Score = 147 bits (371), Expect = 3e-35 Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 6/165 (3%) Frame = -3 Query: 661 SNGDQNGAKATPYDE--LVEEIKASLGNAATAAQVKAVLSSSTLPPKDVIDALFEALFHG 488 SNG+ + P E LV+++K L + + +K+ +SS + PP+D++DALF ALF G Sbjct: 270 SNGNVVKTENPPPQEKNLVQDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDG 329 Query: 487 AGKGFAKDVMKNKKYLAAA--VPDEAAQMLLLQSIEAFCGK-CSAEALKELPVVLKALYD 317 GKGFAK+V K K YLAAA + ++ +QM LL SI FCGK + EALKE+ +VLKALYD Sbjct: 330 VGKGFAKEVTKKKNYLAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYD 389 Query: 316 GDVLEEETIVQWYSEAV-AAGKDSQVVKNAKPVVEWLQSAESDEE 185 D++EEE ++ WY + + A K S V KN KP VEWLQSAES+ E Sbjct: 390 QDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPFVEWLQSAESESE 434
>IF5Y_ARATH (Q9C8F1) Probable eukaryotic translation initiation factor 5-1| (eIF-5 1) Length = 439 Score = 146 bits (369), Expect = 5e-35 Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 5/173 (2%) Frame = -3 Query: 688 NGTAKVEETSNGDQNGAKATPYDELVEEIKASLGNAATAAQVKAVLSSSTLPPKDVIDAL 509 NG +K+ E + +++LV EIK L + ++ Q+K L+S++ P++ +DAL Sbjct: 279 NGNSKIPENA-----------HEKLVNEIKELLSSGSSPTQLKTALASNSANPQEKMDAL 327 Query: 508 FEALFHGAGKGFAKDVMKNKKYLAA--AVPDEA---AQMLLLQSIEAFCGKCSAEALKEL 344 F ALF G GKGFAK+V+K KKYL A + +EA AQM LL IE+FC K SAEA KE+ Sbjct: 328 FSALFGGTGKGFAKEVIKKKKYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEV 387 Query: 343 PVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQSAESDEE 185 +V+K LYD D+L+E+ IV+WY++ V K S V+KN P +EWLQ+AES+ E Sbjct: 388 ALVIKGLYDEDILDEDVIVEWYNKGV---KSSPVLKNVTPFIEWLQNAESESE 437
>IF5_PHAVU (P48724) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 443 Score = 142 bits (357), Expect = 1e-33 Identities = 71/165 (43%), Positives = 107/165 (64%), Gaps = 1/165 (0%) Frame = -3 Query: 676 KVEETSNGDQNGAKATPYDELVEEIKASLGNAATAAQVKAVLSSSTLPPKDVIDALFEAL 497 K NG + Y +V E+KA+L A+++ + L++ +P ++ + AL EAL Sbjct: 277 KAASNQNGGSQNGNSKNYGTVVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEAL 336 Query: 496 FHGAGKGFAKDVMKNKKYLAAAVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYD 317 F G KGF ++ +K K Y AAAV +E +Q+LLL +IE FC K ++ ALKE+ +VLK LYD Sbjct: 337 FEGTEKGFGRETLKKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYD 396 Query: 316 GDVLEEETIVQWYSEAVAA-GKDSQVVKNAKPVVEWLQSAESDEE 185 DVLEEE IV WY + + K+S++ KNA+P ++WLQ+AES+ + Sbjct: 397 ADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESD 441
>IF5_CAEEL (Q22918) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 436 Score = 59.3 bits (142), Expect = 1e-08 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 5/100 (5%) Frame = -3 Query: 469 KDVMKNKKYLAA-AVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEET 293 K + K++ L + D+ AQ LL +E K AE L + ++K+LYD DV EE++ Sbjct: 278 KQISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEEDS 337 Query: 292 IVQW----YSEAVAAGKDSQVVKNAKPVVEWLQSAESDEE 185 ++ W S+ V+ ++++N++PV+ WL+ AE + E Sbjct: 338 LISWGEKPSSKYVSKSFAKKIIENSQPVLNWLKEAEEETE 377
>IF5_HUMAN (P55010) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 431 Score = 54.7 bits (130), Expect = 3e-07 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Frame = -3 Query: 424 DEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQ 245 ++ AQ LL +E A+ + ++P +LK +YD D+LEEE I+ W +A + Sbjct: 307 NKKAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKE 366 Query: 244 VVK----NAKPVVEWLQSAESD 191 + K A+P ++WL+ AE + Sbjct: 367 LAKEIRVKAEPFIKWLKEAEEE 388
>IF5_RAT (Q07205) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 54.7 bits (130), Expect = 3e-07 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Frame = -3 Query: 424 DEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQ 245 ++ AQ LL +E A+ + ++P +LK +YD D+LEEE I+ W +A + Sbjct: 305 NKKAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKE 364 Query: 244 VVK----NAKPVVEWLQSAESD 191 + K A+P ++WL+ AE + Sbjct: 365 LAKEIRVKAEPFIKWLKEAEEE 386
>IF5_MOUSE (P59325) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 54.7 bits (130), Expect = 3e-07 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Frame = -3 Query: 424 DEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQ 245 ++ AQ LL +E A+ + ++P +LK +YD D+LEEE I+ W +A + Sbjct: 305 NKKAQRYLLHGLECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKE 364 Query: 244 VVK----NAKPVVEWLQSAESD 191 + K A+P ++WL+ AE + Sbjct: 365 LAKEIRVKAEPFIKWLKEAEEE 386
>IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 405 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Frame = -3 Query: 391 IEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEA----VAAGKDSQVVKNAKP 224 IE F G + + LP +L LY+ D++ EE I+++ +++ V +V + AKP Sbjct: 328 IERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKP 387 Query: 223 VVEWLQSAESDEE 185 + WL++AESD++ Sbjct: 388 FITWLETAESDDD 400
>IF5_DROME (Q9VXK6) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 464 Score = 42.0 bits (97), Expect = 0.002 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%) Frame = -3 Query: 469 KDVMKNKKYLAA-AVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEET 293 KDV KN+ L + + AQ L+ +E + ++ + K YD D+L+E Sbjct: 314 KDVQKNRPLLLRFTLNNPKAQRYLIGGVEQTVELHKGILMSKVAGIFKLFYDLDILDEAV 373 Query: 292 IVQWYSEA----VAAGKDSQVVKNAKPVVEWL-----QSAESDEE*D 179 I++W + V+ +++ + A P V WL +S+ES+EE D Sbjct: 374 ILEWAQKVSKRHVSKNIAAEIHEKAMPFVLWLKNAEEESSESEEEED 420
>EI2BE_YEAST (P32501) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD6) (GCD complex subunit GCD6) Length = 712 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/130 (23%), Positives = 57/130 (43%) Frame = -3 Query: 580 ATAAQVKAVLSSSTLPPKDVIDALFEALFHGAGKGFAKDVMKNKKYLAAAVPDEAAQMLL 401 A +V +++ TL PKD + +F G F + ++Y+ + +++ Sbjct: 591 ALLRRVYHFIATQTLGPKDAVVKVFNQW----GLLFKRQAFDEEEYI------DLMNIIM 640 Query: 400 LQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPV 221 + +E K L +LYD D++EE+ I +W+ + +V K Sbjct: 641 EKIVEQSFDKPDLILFS----ALVSLYDNDIIEEDVIYKWWDNVSTDPRYDEVKKLTVKW 696 Query: 220 VEWLQSAESD 191 VEWLQ+A+ + Sbjct: 697 VEWLQNADEE 706
>EI2BE_RAT (Q64350) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) Length = 716 Score = 40.4 bits (93), Expect = 0.005 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -3 Query: 346 LPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKN--AKPVVEWLQSAESDEE*D 179 L VL A Y ++L EETI+ W+S+ K Q+ KN + ++WL+ AE + D Sbjct: 658 LAKVLMAFYQLEILAEETILSWFSQRDITDKGQQLRKNQQLQRFIQWLREAEEESSDD 715
>EI2BE_HUMAN (Q13144) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) Length = 721 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -3 Query: 337 VLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKN--AKPVVEWLQSAESDEE*D 179 VL A Y ++L EETI+ W+S+ K Q+ KN + ++WL+ AE + D Sbjct: 666 VLMAFYQLEILAEETILSWFSQRDTTDKGQQLRKNQQLQRFIQWLKEAEEESSED 720
>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) Length = 1600 Score = 40.0 bits (92), Expect = 0.007 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 18/182 (9%) Frame = -3 Query: 676 KVEET--SNGDQNGAKATPYDELVEEIKASLGNAATAAQV----KAVLSSSTLPPKDVID 515 KVE T + G +A P +EL +++ L ++ +V +A LS + ++ Sbjct: 1422 KVEYTLGEESEAPGQRALPSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLVR 1481 Query: 514 ALFEALFHGA---GKGFAKDVMKNK---KYLAAAVPDEAAQMLLLQSIEAFCGKCSAEAL 353 AL A+ + A DV K K L + DE ++ L +++A L Sbjct: 1482 ALMTAVCYSAIIFETPLRVDVAVLKARAKLLQKYLCDEQKELQALYALQAL-----VVTL 1536 Query: 352 KELPVVLK----ALYDGDVLEEETIVQWYSEAVAAGKDSQ--VVKNAKPVVEWLQSAESD 191 ++ P +L+ ALYD DV++E+ W S A + + +K+ +WL+ AE + Sbjct: 1537 EQPPNLLRMFFDALYDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEE 1596 Query: 190 EE 185 + Sbjct: 1597 SD 1598
>EI2BE_CANAL (P87163) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD6) (GCD complex subunit GCD6) (Fragment) Length = 189 Score = 37.7 bits (86), Expect = 0.034 Identities = 16/49 (32%), Positives = 32/49 (65%) Frame = -3 Query: 334 LKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQSAESDE 188 +K+ YD +V+EEE I++W+++ G++ +V A + WLQ A+ ++ Sbjct: 136 VKSFYDMEVVEEENILKWWND----GENDEVRTLAAKFITWLQEADEED 180
>EI2BE_RABIT (P47823) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) Length = 721 Score = 37.0 bits (84), Expect = 0.058 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -3 Query: 337 VLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKN--AKPVVEWLQSAESDEE*D 179 VL Y ++L EETI+ W+ + K Q+ KN + ++WL+ AE + D Sbjct: 666 VLMGFYQLEILAEETILSWFGQRDVTDKGRQLRKNQQLQRFIQWLKEAEEESSED 720
>EI2BE_SCHPO (P56287) Probable translation initiation factor eIF-2B epsilon| subunit (eIF-2B GDP-GTP exchange factor) Length = 678 Score = 35.4 bits (80), Expect = 0.17 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Frame = -3 Query: 523 VIDALFEALFH---GAGKGFAKDVMKNKKYLAAAVPDEAAQMLLLQSIEAFCGKCSAEAL 353 ++ AL + H + AK + + LA Q+ + +++ +C + S Sbjct: 557 IVLALLRRIMHLDVSPKEALAKVMTRWGPLLAKLTFSHEEQVDNVLTLQKYCVRLSMT-- 614 Query: 352 KELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNA--KPVVEWLQSAESDEE 185 + +L Y ++ EE I +WYS+ ++ + +++A K V+WL +AES+ E Sbjct: 615 RHFLQLLGYFYQLEIAEENAIQEWYSDPRSSEGELAALRDAGGKQFVDWLNTAESESE 672
>IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) Length = 1600 Score = 34.7 bits (78), Expect = 0.29 Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 14/177 (7%) Frame = -3 Query: 676 KVEET--SNGDQNGAKATPYDELVEEIKASLGNAATAAQV---------KAVLSSSTLPP 530 KVE T + G + ++EL +++ L + + +V + ++S+TL Sbjct: 1421 KVEYTLGEESEAPGQRTLAFEELRRQLEKLLKDGGSNQRVFDWIDANLNEQQIASNTLVR 1480 Query: 529 KDVIDALFEALFHGAGKGFAKDVMKNK-KYLAAAVPDEAAQMLLLQSIEAFCGKCSAEAL 353 + + A+ V+K + + L + DE ++ L +++A A Sbjct: 1481 ALMTTVCYSAIIFETPLRVDVQVLKVRARLLQKYLCDEQKELQALYALQALVVTLEQPA- 1539 Query: 352 KELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQ--VVKNAKPVVEWLQSAESDE 188 L + ALYD DV++E+ W S A + + +K+ WL+ AE +E Sbjct: 1540 NLLRMFFDALYDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFNWLREAEDEE 1596
>IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) Length = 1402 Score = 33.9 bits (76), Expect = 0.49 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 16/179 (8%) Frame = -3 Query: 676 KVEET--SNGDQNGAKATPYDELVEEIKASLGNAATAAQV----KAVLSSSTLPPKDVID 515 KVE T + G +A +EL +++ L ++ +V +A LS + ++ Sbjct: 1224 KVEYTLGEESEAPGQRALSSEELSRQLEKVLKEGSSNQRVFDWIEANLSEQQIASNTLVR 1283 Query: 514 ALFEALFHGA-----GKGFAKDVMKNKKYL---AAAVPDEAAQMLLLQSIEAFCGKCSAE 359 AL A+ + A V+K + + + AA++ LQ++ + Sbjct: 1284 ALMTAVCYSAIIFETPLRVDVAVLKGDRICYRNTCVIAEGAARLYALQALVVTL----EQ 1339 Query: 358 ALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQ--VVKNAKPVVEWLQSAESDE 188 L + ALYD DV++EE W S A + + +K+ +WL+ E +E Sbjct: 1340 PANLLRMFFDALYDEDVVKEEAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREVEEEE 1398
>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 467 Score = 33.1 bits (74), Expect = 0.83 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +1 Query: 490 HGRAPRREHLSHPSGAGSRRTAPP*PELPWQHC 588 HGRAPRR PSG G PP P LP C Sbjct: 231 HGRAPRR-----PSGPGPPSPTPPAPRLPQDPC 258
>EFG_BACSK (Q5WLR5) Elongation factor G (EF-G)| Length = 692 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 7/111 (6%) Frame = -3 Query: 505 EALFHGAGKGFAKDVMKNKKYLAAAVPDEAAQM-------LLLQSIEAFCGKCSAEALKE 347 EAL +G G+ +K K Y + ++++M + L++ ++ C E + + Sbjct: 546 EALQNGMIAGYPVIDIKAKLYDGSYHDVDSSEMAFKIAASMALKNAKSKCDPVLLEPISK 605 Query: 346 LPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQSAES 194 + +V+ Y GD++ + T + E + A ++QVVK P+ E A S Sbjct: 606 VEIVVPEEYMGDIMGDVTARRGRVEGMEARGNAQVVKAFVPLAEMFGYATS 656
>EFG_BACHD (Q9Z9L7) Elongation factor G (EF-G)| Length = 692 Score = 31.6 bits (70), Expect = 2.4 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Frame = -3 Query: 511 LFEALFHGAGKGFAKDVMKNKKYLAAAVPDEAAQM-------LLLQSIEAFCGKCSAEAL 353 L EAL +G G+ +K K + + ++++M + L++ ++ C E + Sbjct: 544 LEEALENGLLAGYPVIDIKAKLFDGSYHDVDSSEMAFKIAASMALKNAKSKCNPVLLEPM 603 Query: 352 KELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQSAES 194 ++ VV+ Y GDV+ + T + E + A ++QVVK P+ E A S Sbjct: 604 MKVEVVVPEEYMGDVMGDITSRRGRVEGMEARGNAQVVKAFVPLAEMFGYATS 656
>GATB_BRUSU (P64198) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 500 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Frame = -3 Query: 409 MLLLQSIEAFCGKCSAEALKELPVVLK---------ALYDGDVLEEETIVQWYSEAVAAG 257 +L L+ +AF +A+ L ELP V K ++YD +L E + Y EAVA G Sbjct: 301 LLPLEFDQAFVDALAAK-LPELPDVKKQRLVETLGISVYDASILVTEKAIADYYEAVAEG 359 Query: 256 KDSQVVKN 233 +D + N Sbjct: 360 RDGKAAAN 367
>GATB_BRUME (P64197) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 500 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Frame = -3 Query: 409 MLLLQSIEAFCGKCSAEALKELPVVLK---------ALYDGDVLEEETIVQWYSEAVAAG 257 +L L+ +AF +A+ L ELP V K ++YD +L E + Y EAVA G Sbjct: 301 LLPLEFDQAFVDALAAK-LPELPDVKKQRLVETLGISVYDASILVTEKAIADYYEAVAEG 359 Query: 256 KDSQVVKN 233 +D + N Sbjct: 360 RDGKAAAN 367
>PEPT_ENTFA (Q835J5) Peptidase T (EC 3.4.11.4) (Tripeptide aminopeptidase)| (Aminotripeptidase) (Tripeptidase) Length = 409 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/76 (23%), Positives = 35/76 (46%) Frame = -3 Query: 436 AAVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAG 257 A P+EA +++ + +KE+ L A +D + ++ + Q+Y+ Sbjct: 271 AGTPEEATMTYIIRDHNREIFEARKAKIKEIQQTLNAPFDEERIKVDLFDQYYNMREVIE 330 Query: 256 KDSQVVKNAKPVVEWL 209 KD +V+ AK +E L Sbjct: 331 KDMSIVEIAKQAMEEL 346
>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1579 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Frame = -3 Query: 448 KYLAAAVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSE- 272 KYL + D ++ L +++A K A L + LYD +V+ E+ +W S Sbjct: 1492 KYLDS---DTEKELQALYALQASIVKLDQPA-NLLRMFFDCLYDEEVISEDAFYKWESSK 1547 Query: 271 --AVAAGKDSQVVKNAKPVVEWLQSAESDEE 185 A AGK +K+ WL+ AE + E Sbjct: 1548 DPAEQAGK-GVALKSVTAFFTWLREAEEESE 1577
>GATB_AGRT5 (Q8UFS3) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 501 Score = 30.8 bits (68), Expect = 4.1 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -3 Query: 328 ALYDGDVLEEETIVQWYSEAVAAGKDSQVVKN 233 ++YD +L E + Y EAVAAG+D++ N Sbjct: 336 SVYDASILVSEKAIADYYEAVAAGRDAKTAAN 367
>EFG_GEOKA (Q5L400) Elongation factor G (EF-G)| Length = 692 Score = 30.8 bits (68), Expect = 4.1 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Frame = -3 Query: 532 PKDVIDA----LFEALFHGAGKGFAKDVMKNKKYLAAAVPDEAAQM-------LLLQSIE 386 PK+ + A L EA+ +G G+ +K K + + ++++M L L++ Sbjct: 533 PKEYVPAVQAGLEEAMQNGVLAGYPVVDIKAKLFDGSYHDVDSSEMAFKIAASLALKNAA 592 Query: 385 AFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQ 206 C E + ++ VV+ Y GD++ + T + E + A ++QVV+ P+ E Sbjct: 593 TKCDPVLLEPIMKVEVVIPEEYLGDIMGDITSRRGRIEGMEARGNAQVVRAMVPMAEMFG 652 Query: 205 SAES 194 A S Sbjct: 653 YATS 656
>AMPA_CHLTR (O84049) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 499 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Frame = -3 Query: 460 MKNKKYLAAAVPDEAAQMLLLQSIEAFCGKCSAEAL-------KELPVVLKALYDGDVLE 302 MKN K AAV DE +++ ++ F GK A KE +VL L + + Sbjct: 25 MKNSKAQEAAVVDEDYKLVYQNALSNFSGKKGETAFLFGNDHTKEQKIVLLGLGKSEEVS 84 Query: 301 EETIVQWYSEA 269 T+++ Y++A Sbjct: 85 GTTVLEAYAQA 95
>EFG_BACCR (Q814C5) Elongation factor G (EF-G)| Length = 692 Score = 30.4 bits (67), Expect = 5.4 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Frame = -3 Query: 532 PKDVIDA----LFEALFHGAGKGFA----KDVMKNKKYLAAAVPDEAAQMLLLQSIEAFC 377 P++ I A L +AL +G G+ K + + Y + A ++ +++A Sbjct: 533 PREYIPAVGAGLEDALKNGVLAGYPLVDIKAALVDGSYHDVDSSEMAFKIAASMALKAAV 592 Query: 376 GKCSA---EALKELPVVLKALYDGDVLEEETIVQWYSEAVAAGKDSQVVKNAKPVVEWLQ 206 KCS E + ++ VV+ Y GD++ + T + E + A ++QVV+ P+ E Sbjct: 593 SKCSPVILEPMMKVEVVIPEEYMGDIMGDVTSRRGRVEGMEARGNAQVVRAMVPLSEMFG 652 Query: 205 SAES 194 A S Sbjct: 653 YATS 656
>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1585 Score = 30.4 bits (67), Expect = 5.4 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = -3 Query: 448 KYLAAAVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSEA 269 KYL + D ++ L +++A K A L + LYD +V+ E+ +W S Sbjct: 1498 KYLDS---DTEKELQALYALQASIVKLDQPA-NLLRMFFDCLYDEEVISEDAFYKWESSK 1553 Query: 268 VAAGKDSQ--VVKNAKPVVEWLQSAESDEE 185 A ++ + +K+ WL+ AE + E Sbjct: 1554 DPAEQNGKGVALKSVTAFFTWLREAEEESE 1583
>CPXM_BACSU (P27632) Cytochrome P450 109 (EC 1.14.-.-) (ORF405)| Length = 405 Score = 30.0 bits (66), Expect = 7.1 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 3/129 (2%) Frame = -3 Query: 625 YDELVEEIK-ASLGNAATAAQVKAVLSSSTLPPKDV-IDALFEALFHGAGKGFAKDVMKN 452 YD++ +K L ++ Q +++L+ PPK + AL F K + Sbjct: 59 YDDVQFVLKNPKLFSSKRGIQTESILTMD--PPKHTKLRALVSRAFTPKA---VKQLETR 113 Query: 451 KKYLAAAVPDEAAQMLLLQSIEAFCGKCSAEALKELPVVLKALYDGDVLEEETIVQWYSE 272 K + A + EA Q + IE F G LPV++ A G +E+ +++ YS+ Sbjct: 114 IKDVTAFLLQEARQKSTIDIIEDFAGP--------LPVIIIAEMLGAPIEDRHLIKTYSD 165 Query: 271 AVAAG-KDS 248 + AG KDS Sbjct: 166 VLVAGAKDS 174
>NANK2_ECOL6 (Q8FDU8) Putative N-acetylmannosamine kinase 2 (EC 2.7.1.60)| (ManNAc kinase 2) Length = 291 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = -3 Query: 643 GAKATPYDELVEEIKASLGNAATAAQVKAVLSSSTLPPKDVIDALFEALFHGAGKGFAKD 464 G K P ++E+I G+ AQ A + T+ PK++ D +F + G G G Sbjct: 82 GLKEYPLKNIMEDITGLNGSVINDAQA-AAWAEYTVLPKEICDMVFITVSTGVGGG---- 136 Query: 463 VMKNKKYL 440 ++ N+K L Sbjct: 137 IVVNRKLL 144
>K1683_HUMAN (Q9H0B3) Protein KIAA1683| Length = 1180 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +1 Query: 142 GSMEWEQAVKVQRLTPRQTRR---SGATPRRAWRSSQPGSPCRQQQLHCTTAQ 291 G++ W A ++ L+PRQ R + + AWR + RQQQ+ Q Sbjct: 1092 GAVSWASAYQLAALSPRQPHRQDKAATAIQSAWRGFKIRQQMRQQQMAAKIVQ 1144
>HNF3B_MOUSE (P35583) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 459 Score = 29.6 bits (65), Expect = 9.2 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%) Frame = +1 Query: 457 SSHPLQTPCQHHGRAPRREHLSHPSGAGSRRTAPP*P-ELPWQHCLGSP*SLQPVHH--- 624 S H +PCQ H +R LS GA + +PP P P Q + L P HH Sbjct: 304 SPHSSASPCQEH----KRGGLSELKGAPASALSPPEPAPSPGQQQQAAAHLLGPPHHPGL 359 Query: 625 REWLWLHSGHHWRFLQP 675 L HH+ F P Sbjct: 360 PPEAHLKPEHHYAFNHP 376
>ATPG_OCEIH (Q8EM82) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 286 Score = 29.6 bits (65), Expect = 9.2 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 694 GANGTAKVEETSNGDQNGAKATPYDELVEEIKASLGNAATAAQ 566 GA + S +QN PY + ++E+ +S+ NA T AQ Sbjct: 22 GAMQLVSASKMSKAEQNARGFVPYADKLQEVVSSIANANTDAQ 64
>GLND_STRCO (O69873) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 835 Score = 29.6 bits (65), Expect = 9.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +3 Query: 414 AASSGTAAARYFLFFITSFANPLPAPWKSASKRASITSFG 533 AA +G +R+ + + + A PLP PW + ++ +T G Sbjct: 350 AAQAGLPLSRHAVRRLAATARPLPTPWPAEAREQLVTLLG 389
>P3C2A_HUMAN (O00443) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing alpha polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-alpha) (PtdIns-3-kinase C2 alpha) (PI3K-C2alpha) Length = 1686 Score = 29.6 bits (65), Expect = 9.2 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 259 RQQQLHCTTAQ*FLPQGHLRHRGPSGRQAIPSG 357 R Q L+ T Q QGH+ + P+G ++P+G Sbjct: 335 RSQSLNIRTTQLAKAQGHISQKDPNGTSSLPTG 367
>KBTB7_HUMAN (Q8WVZ9) Kelch repeat and BTB domain-containing protein 7| Length = 684 Score = 29.6 bits (65), Expect = 9.2 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -3 Query: 610 EEIKASLGNAATAAQVKAVLSSSTLPPKDVIDALFEALFHGAGKGFAKDVMKNKKYLAAA 431 EE+K + +AA AQ+K+ + L D E + G+G G + N+ LAAA Sbjct: 38 EELKDTAHSAALLAQLKSFYDARLL-----CDVTIEVVTPGSGPGTGRLFSCNRNVLAAA 92 Query: 430 VP 425 P Sbjct: 93 CP 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,380,129 Number of Sequences: 219361 Number of extensions: 1824723 Number of successful extensions: 6743 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 6442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6733 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
