ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase... 167 1e-38
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 151 7e-34
3gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 147 1e-32
4gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 147 1e-32
5gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 147 1e-32
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 147 1e-32
7gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 147 1e-32
8emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 147 1e-32
9gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 147 1e-32
10gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 147 1e-32
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
15gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 147 1e-32
16dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
17dbj|AK070348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 1e-32
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 147 1e-32
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 147 1e-32
20emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523... 147 1e-32
21dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 147 1e-32
22dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-30
23dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-30
24emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa... 139 2e-30
25gb|AY705912.1| Zea mays cytotype NA hypothetical protein genes, ... 121 6e-25
26gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit... 121 6e-25
27gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion... 121 6e-25
28gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion... 121 6e-25
29emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 121 6e-25
30gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 121 6e-25
31emb|X04183.1|CHZMTRNV Zea mays chloroplast tV-UAC gene for trans... 121 6e-25
32gb|M81925.1|PENCPVTGB Pennisetum glaucum chloroplast Val-tRNA gene 121 6e-25
33gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 113 1e-22
34dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 113 1e-22
35gb|M81923.1|CEHCPMVTGA Cenchrus setigerus chloroplast Met-tRNA g... 113 1e-22
36gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple... 80 2e-12
37emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet... 80 2e-12
38emb|AJ429635.1|VVI429635 Vitis vinifera chloroplast atpE gene (p... 80 2e-12
39emb|AM116779.1| Maxburretia rupicola plastid rps16 gene, intron ... 78 8e-12
40emb|AM116778.1| Rhapidophyllum hystrix plastid rps16 gene, intro... 78 8e-12
41emb|AJ404925.1|TFO404925 Trachycarpus fortunei chloroplast parti... 78 8e-12
42emb|AJ240853.1|REX240853 Rhapis excelsa partial rps16 gene 78 8e-12
43emb|AJ240852.1|GAR240852 Guihaia argyrata partial rps16 gene 78 8e-12
44emb|AJ240850.1|RHY240850 Rhapidophyllum hystrix partial rps16 gene 78 8e-12
45emb|AJ240849.1|TNA240849 Trachycarpus nanus partial rps16 gene 78 8e-12
46emb|AJ429638.1|HAS429638 Hydrangea aspera chloroplast atpE gene ... 72 5e-10
47emb|AJ429661.1|CSI429661 Camellia sinensis chloroplast atpE gene... 66 3e-08
48emb|AJ429673.1|OBA429673 Oncotheca balansae chloroplast atpE gen... 58 7e-06
49emb|AJ429667.1|CIL429667 Cassinopsis ilicifolia chloroplast atpE... 58 7e-06
50emb|AJ429662.1|SSU429662 Schima superba chloroplast atpE gene (p... 58 7e-06
51emb|AJ429655.1|HCA429655 Halesia carolina chloroplast atpE gene ... 58 7e-06
52emb|AJ429654.1|SCE429654 Sladenia celastrifolia chloroplast atpE... 58 7e-06
53emb|AJ429647.1|MAF429647 Myrsine africana chloroplast atpE gene ... 58 7e-06
54emb|AJ429637.1|GRO429637 Grubbia rosmarinifolia chloroplast atpE... 58 7e-06
55emb|AJ429636.1|CMA429636 Cornus mas chloroplast atpE gene (parti... 56 3e-05
56emb|AJ007793.1|PEQ7793 Phalaenopsis equestris satellite DNA, iso... 52 5e-04
57emb|AJ627251.1| Nymphaea alba chloroplast, complete genome 52 5e-04
58gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ... 52 5e-04
59emb|AJ429641.1|ICA429641 Impatiens capensis chloroplast atpE gen... 52 5e-04
60emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi... 50 0.002
61emb|AJ429666.1|ADI429666 Apodytes dimidiata chloroplast atpE gen... 50 0.002
62emb|AJ429657.1|SOF429657 Styrax officinale chloroplast atpE gene... 50 0.002
63emb|AJ429656.1|PHI429656 Pterostyrax hispidus chloroplast atpE g... 50 0.002
64emb|AJ429648.1|PEU429648 Pentaphylax euryoides chloroplast atpE ... 50 0.002
65emb|AJ429643.1|FDI429643 Fouquieria diguetii chloroplast atpE ge... 50 0.002
66emb|AJ429658.1|SBO429658 Symplocos bogotensis chloroplast atpE g... 48 0.007
67emb|AJ429526.1|CAL429526 Clethra alnifolia chloroplast atpE gene... 48 0.007
68emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl... 46 0.028
69emb|AJ429660.1|PRH429660 Pelliciera rhizophorae chloroplast atpE... 46 0.028
70emb|AJ429659.1|TGY429659 Ternstroemia gymnanthera chloroplast at... 46 0.028
71emb|AJ429642.1|DKA429642 Diospyros kaki chloroplast atpE gene (p... 46 0.028
72emb|AJ429528.1|TSP429528 Tetramerista sp. Coode 7925 chloroplast... 46 0.028
73emb|AJ429675.1|GSE429675 Gelsemium sempervirens chloroplast atpE... 44 0.11
74emb|AJ430388.1|PFR430388 Proboscidea fragrans chloroplast atpE g... 44 0.11
75emb|AJ429700.1|PPR429700 Polypremum procumbens chloroplast atpE ... 44 0.11
76emb|AJ429699.1|STH429699 Selago thomsoni chloroplast atpE gene (... 44 0.11
77emb|AJ429698.1|MMO429698 Myoporum montanum chloroplast atpE gene... 44 0.11
78emb|AJ429697.1|BAS429697 Buddleja asiatica chloroplast atpE gene... 44 0.11
79emb|AJ429696.1|SPA429696 Schlegelia parviflora chloroplast atpE ... 44 0.11
80emb|AJ429692.1|PLE429692 Phryma leptostachya chloroplast atpE ge... 44 0.11
81emb|AJ429691.1|SOR429691 Sesamum orientale chloroplast atpE gene... 44 0.11
82emb|AJ429690.1|PTO429690 Paulownia tomentosa chloroplast atpE ge... 44 0.11
83emb|AJ429688.1|CSO429688 Cyclocheilon somaliense chloroplast atp... 44 0.11
84emb|AJ429681.1|JMI429681 Jacaranda mimosifolia chloroplast atpE ... 44 0.11
85emb|AJ429679.1|ALO429679 Acanthus longifolius chloroplast atpE g... 44 0.11
86emb|AJ429671.1|VCA429671 Vahlia capensis chloroplast atpE gene (... 44 0.11
87emb|AJ429652.1|MZA429652 Manilkara zapota chloroplast atpE gene ... 44 0.11
88emb|AJ429651.1|RGO429651 Roridula gorgonias chloroplast atpE gen... 44 0.11
89emb|AJ429701.1|VRI429701 Verbena rigida chloroplast atpE gene (p... 42 0.43
90emb|AJ429663.1|TAM429663 Theophrasta americana chloroplast atpE ... 42 0.43
91emb|AJ429649.1|PPU429649 Polemonium pulcherrimum chloroplast atp... 42 0.43
92emb|AJ429646.1|MSP429646 Marcgravia sp. Anderberg s.n. chloropla... 42 0.43
93emb|AJ429644.1|BAS429644 Barringtonia asiatica chloroplast atpE ... 42 0.43
94emb|AJ429634.1|DSI429634 Dipentodon sinicus chloroplast atpE gen... 42 0.43
95gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, co... 40 1.7
96gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence 40 1.7
97gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp... 40 1.7
98emb|AJ879453.1| Acorus calamus chloroplast, complete genome 40 1.7
99dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co... 40 1.7
100gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, comp... 40 1.7
101emb|AJ429670.1|PBU429670 Plocosperma buxifolium chloroplast atpE... 40 1.7
102emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA 38 6.8
103emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ... 38 6.8
104gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, com... 38 6.8
105gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c... 38 6.8
106emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome 38 6.8
107gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla... 38 6.8
108gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ... 38 6.8
109gb|AC124121.18| Mus musculus chromosome 8, clone RP23-169B14, co... 38 6.8
110emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220... 38 6.8
111emb|AL731755.4|CNS08C84 Oryza sativa chromosome 12, . Partial se... 38 6.8
112dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s... 38 6.8
113dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl... 38 6.8
114gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome 38 6.8
115emb|AJ429674.1|ASC429674 Alstonia scholaris chloroplast atpE gen... 38 6.8
116emb|AJ429668.1|ISE429668 Icacina senegalensis chloroplast atpE g... 38 6.8
117gb|K01727.1|TOBCPTGMV Tobacco (N.tabacum) chloroplast Met-tRNA, ... 38 6.8 
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E,
            transfer RNA2-Met and transfer RNA1-Val
          Length = 3819

 Score =  167 bits (84), Expect = 1e-38
 Identities = 108/118 (91%)
 Strand = Plus / Minus

                                                                        
Query: 25   gggctctttcanaaanagccttaaagatcagttagtccaccatagttnttctttacggaa 84
            ||||||||||| |||  |  ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2861 gggctctttcataaactgatttaaagatcagttagtccaccatagtttttctttacggaa 2802

                                                                      
Query: 85   agataatgagctggctccctgtgctctgattgattntttgnnttatgatctatctagg 142
            |||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 2801 agataatgagatggctccctgtgctctgattgattttttgtattatgatctatctagg 2744
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>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  151 bits (76), Expect = 7e-34
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                         
Query: 25    gggctctttcanaaanagccttaaagatcagttagtccaccatagttnttctttacggaa 84
             ||||||||||| |||  |  |||||||||||||||||||||||| || ||||||||||||
Sbjct: 51267 gggctctttcataaactgatttaaagatcagttagtccaccatactttttctttacggaa 51326

                                                                       
Query: 85    agataatgagctggctccctgtgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||| |||||||||||||||||||||||| |||   ||||||||||||||||
Sbjct: 51327 agataatgagatggctccctgtgctctgattgattttttttattatgatctatctagg 51384
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>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 50493 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 50552

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 50553 gctctgattgattatttgtattatgatctatcta 50586
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>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 50493 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 50552

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 50553 gctctgattgattatttgtattatgatctatcta 50586
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>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 50441 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 50500

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 50501 gctctgattgattatttgtattatgatctatcta 50534
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 31514869 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 31514928

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 31514929 gctctgattgattatttgtattatgatctatcta 31514962
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 77727 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 77668

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 77667 gctctgattgattatttgtattatgatctatcta 77634
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>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 50500 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 50559

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 50560 gctctgattgattatttgtattatgatctatcta 50593
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>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 48695 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 48754

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 48755 gctctgattgattatttgtattatgatctatcta 48788
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>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
              chromosome 10, complete sequence
          Length = 134933

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                          
Query: 47     aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
              ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 123628 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 123687

                                                
Query: 107    gctctgattgattntttgnnttatgatctatcta 140
              ||||||||||||| ||||  ||||||||||||||
Sbjct: 123688 gctctgattgattatttgtattatgatctatcta 123721
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 11286655 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 11286714

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 11286715 gctctgattgattatttgtattatgatctatcta 11286748



 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                           
Query: 47      aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
               ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| 
Sbjct: 5609531 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatgactccctgc 5609590

                                                 
Query: 107     gctctgattgattntttgnnttatgatctatcta 140
               ||||||||||||| ||||  ||||||||||||||
Sbjct: 5609591 gctctgattgattatttgtattatgatctatcta 5609624



 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      gccttaaagatcagttagt 60
               |||||||||||||||||||
Sbjct: 7508116 gccttaaagatcagttagt 7508098
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 19944109 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 19944050

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 19944049 gctctgattgattatttgtattatgatctatcta 19944016



 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 10342303 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 10342362

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 10342363 gctctgattgattatttgtattatgatctatcta 10342396
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 12588281 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 12588222

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 12588221 gctctgattgattatttgtattatgatctatcta 12588188



 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 23208603 aaagatcagttagtacaccatagtttttctttacggaaagataatgagatggctccctgc 23208544

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 23208543 gctctgattgattatttgtattatgatctatcta 23208510
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 31605385 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 31605444

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 31605445 gctctgattgattatttgtattatgatctatcta 31605478
to top
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 41934 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 41993

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 41994 gctctgattgattatttgtattatgatctatcta 42027
to top
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652D10
          Length = 156744

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 70594 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 70535

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 70534 gctctgattgattatttgtattatgatctatcta 70501
to top
>dbj|AK070348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051D08, full
           insert sequence
          Length = 599

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                       
Query: 47  aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
           ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 501 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 442

                                             
Query: 107 gctctgattgattntttgnnttatgatctatcta 140
           ||||||||||||| ||||  ||||||||||||||
Sbjct: 441 gctctgattgattatttgtattatgatctatcta 408
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 19955385 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 19955326

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 19955325 gctctgattgattatttgtattatgatctatcta 19955292



 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 10348342 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 10348401

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 10348402 gctctgattgattatttgtattatgatctatcta 10348435
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 47       aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
                ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 11286326 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 11286385

                                                  
Query: 107      gctctgattgattntttgnnttatgatctatcta 140
                ||||||||||||| ||||  ||||||||||||||
Sbjct: 11286386 gctctgattgattatttgtattatgatctatcta 11286419



 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                           
Query: 47      aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
               ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| 
Sbjct: 5609520 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatgactccctgc 5609579

                                                 
Query: 107     gctctgattgattntttgnnttatgatctatcta 140
               ||||||||||||| ||||  ||||||||||||||
Sbjct: 5609580 gctctgattgattatttgtattatgatctatcta 5609613



 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      gccttaaagatcagttagt 60
               |||||||||||||||||||
Sbjct: 7507995 gccttaaagatcagttagt 7507977
to top
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127267

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 85399 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 85340

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 85339 gctctgattgattatttgtattatgatctatcta 85306
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  147 bits (74), Expect = 1e-32
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 50420 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatggctccctgc 50479

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 50480 gctctgattgattatttgtattatgatctatcta 50513
to top
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                          
Query: 47     aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
              |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 159251 aaagatcagttagtacaccatagtttttctttacggaaagataatgagatggctccctgc 159192

                                                
Query: 107    gctctgattgattntttgnnttatgatctatcta 140
              ||||||||||||| ||||  ||||||||||||||
Sbjct: 159191 gctctgattgattatttgtattatgatctatcta 159158
to top
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| 
Sbjct: 43365 aaagatcagttagtacaccatagtttttctttacggaaagataatgagatggctccctgc 43306

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 43305 gctctgattgattatttgtattatgatctatcta 43272
to top
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  139 bits (70), Expect = 2e-30
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| 
Sbjct: 43354 aaagatcagttagtccaccatagtttttctttacggaaagataatgagatgactccctgc 43295

                                               
Query: 107   gctctgattgattntttgnnttatgatctatcta 140
             ||||||||||||| ||||  ||||||||||||||
Sbjct: 43294 gctctgattgattatttgtattatgatctatcta 43261
to top
>gb|AY705912.1| Zea mays cytotype NA hypothetical protein genes, complete cds; tRNA-Met
             (trnM-ct) gene, atpE-ct and atpB-ct pseudogenes, complete
             sequence; hypothetical protein genes, complete cds; NADH
             dehydrogenase subunit I (nad1) gene, partial cds;
             ribosomal protein S13 (rps13) gene, complete cds; and
             tRNA-Met (trnfM) gene, complete sequence; mitochondrial
          Length = 40000

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 22180 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 22239

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||||||| ||||  ||||||||||||||||
Sbjct: 22240 tgctctgattgattatttgtcttatgatctatctagg 22276
to top
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
             genome
          Length = 701046

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 22180 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 22239

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||||||| ||||  ||||||||||||||||
Sbjct: 22240 tgctctgattgattatttgtcttatgatctatctagg 22276
to top
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 59343 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 59402

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||||||| ||||  ||||||||||||||||
Sbjct: 59403 tgctctgattgattatttgtcttatgatctatctagg 59439
to top
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                          
Query: 46     taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
              ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 194366 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 194425

                                                   
Query: 106    tgctctgattgattntttgnnttatgatctatctagg 142
              |||||||||||||| ||||  ||||||||||||||||
Sbjct: 194426 tgctctgattgattatttgtcttatgatctatctagg 194462
to top
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 53289 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 53348

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||||||| ||||  ||||||||||||||||
Sbjct: 53349 tgctctgattgattatttgtcttatgatctatctagg 53385
to top
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 53278 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 53337

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||||||| ||||  ||||||||||||||||
Sbjct: 53338 tgctctgattgattatttgtcttatgatctatctagg 53374
to top
>emb|X04183.1|CHZMTRNV Zea mays chloroplast tV-UAC gene for transfer RNA-Val (UAC)
          Length = 1047

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 636 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 577

                                                
Query: 106 tgctctgattgattntttgnnttatgatctatctagg 142
           |||||||||||||| ||||  ||||||||||||||||
Sbjct: 576 tgctctgattgattatttgtcttatgatctatctagg 540
to top
>gb|M81925.1|PENCPVTGB Pennisetum glaucum chloroplast Val-tRNA gene
          Length = 880

 Score =  121 bits (61), Expect = 6e-25
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||| ||| |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 641 taaagatcagttaatccgccatagtttttctttagggaaagataataagatggctccctg 582

                                                
Query: 106 tgctctgattgattntttgnnttatgatctatctagg 142
           |||||||||||||| |||   ||||||||||||||||
Sbjct: 581 tgctctgattgattatttttcttatgatctatctagg 545
to top
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  113 bits (57), Expect = 1e-22
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                          
Query: 46     taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
              ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 115431 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 115490

                                                   
Query: 106    tgctctgattgattntttgnnttatgatctatctagg 142
              |||||||||| ||| ||||  ||||||||||||||||
Sbjct: 115491 tgctctgatttattatttgtcttatgatctatctagg 115527
to top
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  113 bits (57), Expect = 1e-22
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             ||||||||||||| | | |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 53804 taaagatcagttaattcgccatagtttttctttagggaaagataataagatggctccctg 53863

                                                  
Query: 106   tgctctgattgattntttgnnttatgatctatctagg 142
             |||||||||| ||| ||||  ||||||||||||||||
Sbjct: 53864 tgctctgatttattatttgtcttatgatctatctagg 53900
to top
>gb|M81923.1|CEHCPMVTGA Cenchrus setigerus chloroplast Met-tRNA gene, and Val-tRNA gene
          Length = 1189

 Score =  113 bits (57), Expect = 1e-22
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||| ||  |||||||| ||||||| ||||||||||| || ||||||||||
Sbjct: 930 taaagatcagttaatctgccatagtttttctttagggaaagataataagatggctccctg 871

                                                
Query: 106 tgctctgattgattntttgnnttatgatctatctagg 142
           |||||||||||||| |||   ||||||||||||||||
Sbjct: 870 tgctctgattgattatttttcttatgatctatctagg 834
to top
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 46    taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
             |||| |||||||||||||||||| || ||||| || ||||||||| ||| ||||||| ||
Sbjct: 55764 taaatatcagttagtccaccatattttttcttgacagaaagataaagagatggctccatg 55823

                               
Query: 106   tgctctgattgattnttt 123
             |||||||||| ||| |||
Sbjct: 55824 tgctctgattcattattt 55841
to top
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
             |||||||||||||||||||||| || ||||| || | ||||||||||| ||||||| || 
Sbjct: 52646 aaagatcagttagtccaccatattttttcttgacaggaagataatgagatggctccatgc 52705

                               
Query: 107   gctctgattgattntttg 124
             ||||||||| ||| ||||
Sbjct: 52706 gctctgattcattatttg 52723
to top
>emb|AJ429635.1|VVI429635 Vitis vinifera chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1487

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||||||||| || ||||| || ||||||||| ||| ||||||| ||
Sbjct: 110 taaatatcagttagtccaccatattttttcttgacagaaagataaagagatggctccatg 169

                             
Query: 106 tgctctgattgattnttt 123
           |||||||||| ||| |||
Sbjct: 170 tgctctgattcattattt 187
to top
>emb|AM116779.1| Maxburretia rupicola plastid rps16 gene, intron 1, specimen voucher
           C. E. Lewis 02-080 (FTG)
          Length = 954

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 318 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 260

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 259 tgctctgatt 250
to top
>emb|AM116778.1| Rhapidophyllum hystrix plastid rps16 gene, intron 1, specimen
           voucher 013-67-01301 (K)
          Length = 952

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 318 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 260

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 259 tgctctgatt 250
to top
>emb|AJ404925.1|TFO404925 Trachycarpus fortunei chloroplast partial rps16 gene for ribosomal
           protein S16, exon 2
          Length = 988

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 351 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 293

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 292 tgctctgatt 283
to top
>emb|AJ240853.1|REX240853 Rhapis excelsa partial rps16 gene
          Length = 986

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 349 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 291

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 290 tgctctgatt 281
to top
>emb|AJ240852.1|GAR240852 Guihaia argyrata partial rps16 gene
          Length = 988

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 350 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 292

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 291 tgctctgatt 282
to top
>emb|AJ240850.1|RHY240850 Rhapidophyllum hystrix partial rps16 gene
          Length = 987

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 349 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 291

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 290 tgctctgatt 281
to top
>emb|AJ240849.1|TNA240849 Trachycarpus nanus partial rps16 gene
          Length = 986

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           ||||||||||||||||||||||| || |||||||| | || |||||||| ||||||| ||
Sbjct: 349 taaagatcagttagtccaccata-tttttctttacaggaaaataatgagatggctccatg 291

                     
Query: 106 tgctctgatt 115
           ||||||||||
Sbjct: 290 tgctctgatt 281
to top
>emb|AJ429638.1|HAS429638 Hydrangea aspera chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1477

 Score = 71.9 bits (36), Expect = 5e-10
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 47  aaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgt 106
           |||||||||||||| | ||||| || ||||| || ||||||||| ||| ||||||| |||
Sbjct: 113 aaagatcagttagttcgccatattttttcttgacagaaagataaggagatggctccatgt 172

                             
Query: 107 gctctgattgattntttg 124
           ||||||||| ||| ||||
Sbjct: 173 gctctgattcattatttg 190
to top
>emb|AJ429661.1|CSI429661 Camellia sinensis chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1479

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||| ||||| || ||||| || |||| |||| ||| |||||||| |
Sbjct: 111 taaatatcagttagtccgccatattttttcttgacagaaaaataaggagatggctccccg 170

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 171 tgctctgattcattatttg 189
to top
>emb|AJ429673.1|OBA429673 Oncotheca balansae chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1528

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||| ||||| || || || || |||| |||| ||| ||||||| ||
Sbjct: 109 taaatatcagttagtccgccatatttgtttttgacagaaaaataaggagatggctccatg 168

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 169 tgctctgattcattatttg 187
to top
>emb|AJ429667.1|CIL429667 Cassinopsis ilicifolia chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1496

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||||||||| || ||||| || |||| |||| ||| ||||||| |||||||||||| |
Sbjct: 123 agtccaccatattttttcttgacagaaaaataaggagatggctccatgtgctctgattca 182

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 183 ttatttg 189
to top
>emb|AJ429662.1|SSU429662 Schima superba chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1498

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||| ||||| || ||||| ||  ||| |||| ||| |||||||| |
Sbjct: 111 taaatatcagttagtccgccatattttttcttgacataaaaataaggagatggctccccg 170

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 171 tgctctgattcattatttg 189
to top
>emb|AJ429655.1|HCA429655 Halesia carolina chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1491

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||| ||||| ||||| || ||||| || |||| |||| ||| |||||||| |
Sbjct: 111 taaatatcagtcagtccgccatattttttcttgacagaaaaataaggagatggctccccg 170

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 171 tgctctgattcattatttg 189
to top
>emb|AJ429654.1|SCE429654 Sladenia celastrifolia chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1458

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||| ||||| || ||||| || |||| |||  ||| |||||||| |
Sbjct: 110 taaatatcagttagtccgccatattttttcttgacagaaaaatagggagatggctccccg 169

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 170 tgctctgattcattatttg 188
to top
>emb|AJ429647.1|MAF429647 Myrsine africana chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1482

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| ||||| |||||| ||||| || ||||| || |||| |||| ||| |||||||| |
Sbjct: 109 taaatatcagctagtccgccatattttttcttgacagaaaaataaagagatggctccccg 168

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 169 tgctctgattcattatttg 187
to top
>emb|AJ429637.1|GRO429637 Grubbia rosmarinifolia chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1463

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| ||||| |||||| ||||| || ||||| || ||||| ||| ||| ||||||| ||
Sbjct: 115 taaatatcagctagtccgccatattttttcttgacagaaagctaaggagatggctccatg 174

                              
Query: 106 tgctctgattgattntttg 124
           |||||||||| ||| ||||
Sbjct: 175 tgctctgattcattatttg 193
to top
>emb|AJ429636.1|CMA429636 Cornus mas chloroplast atpE gene (partial), tRNA-Val gene (partial)
           and tRNA-Met gene
          Length = 1505

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| ||||| |||||  ||||| || ||||| || ||||||||| ||| ||||||| ||
Sbjct: 110 taaatatcagctagtctgccatattttttcttgacagaaagataaggagatggctccatg 169

                             
Query: 106 tgctctgattgattnttt 123
           |||||||||| ||| |||
Sbjct: 170 tgctctgattcattattt 187
to top
>emb|AJ007793.1|PEQ7793 Phalaenopsis equestris satellite DNA, isolate W9A1
          Length = 780

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 46  taaagatcagttagtccaccatagtt 71
           ||||||||||||||||||||||||||
Sbjct: 424 taaagatcagttagtccaccatagtt 449



 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           |||||| |||| ||||||| |||||||||||| ||| ||||
Sbjct: 479 aagatattgagatggctccatgtgctctgattcattatttg 519
to top
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 51    atcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgtgctc 110
             |||||||||||||||||| ||  ||||||    ||||||| ||| ||||||| |||||||
Sbjct: 56263 atcagttagtccaccatattttatctttatatgaagataacgagatggctccatgtgctc 56322

                  
Query: 111   tgatt 115
             |||||
Sbjct: 56323 tgatt 56327
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>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 46    taaagatcagttagtccaccatagtt 71
             ||||||||||||||||||||||||||
Sbjct: 52115 taaagatcagttagtccaccatagtt 52140
to top
>emb|AJ429641.1|ICA429641 Impatiens capensis chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1506

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 51  atcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgtgctc 110
           |||||||||||| ||||| || ||||| || ||||||||| ||| |||||||  ||||||
Sbjct: 115 atcagttagtccgccatattttttcttgacagaaagataaggagatggctccacgtgctc 174

            
Query: 111 t 111
           |
Sbjct: 175 t 175
to top
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                         
Query: 47    aaagatcagttagtccaccatagttnttctttacggaaagataa 90
             |||||||||||||||||||||  || |||||||| |||||||||
Sbjct: 57351 aaagatcagttagtccaccat-ctttttctttacagaaagataa 57393
to top
>emb|AJ429666.1|ADI429666 Apodytes dimidiata chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1515

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttnttctttacggaaagataatgagctggctccctg 105
           |||| |||||||||||| ||||| || ||||| || |||| |||| | | ||||||| ||
Sbjct: 112 taaatatcagttagtccgccatattttttcttgacagaaaaataaggggatggctccatg 171

                              
Query: 106 tgctctgattgattntttg 124
           || ||||||| ||| ||||
Sbjct: 172 tgttctgattcattatttg 190
to top
>emb|AJ429657.1|SOF429657 Styrax officinale chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1515

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 122 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 181

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 182 ttatttg 188
to top
>emb|AJ429656.1|PHI429656 Pterostyrax hispidus chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1533

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 123 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 182

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 183 ttatttg 189
to top
>emb|AJ429648.1|PEU429648 Pentaphylax euryoides chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1477

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 122 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 181

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 182 ttatttg 188
to top
>emb|AJ429643.1|FDI429643 Fouquieria diguetii chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1486

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 122 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 181

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 182 ttatttg 188
to top
>emb|AJ429658.1|SBO429658 Symplocos bogotensis chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1477

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 122 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 181

                 
Query: 118 ttnttt 123
           || |||
Sbjct: 182 ttattt 187
to top
>emb|AJ429526.1|CAL429526 Clethra alnifolia chloroplast atpE gene (partial), tRNA-Val gene
           and tRNA-Met gene
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| |
Sbjct: 101 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattca 160

                 
Query: 118 ttnttt 123
           || |||
Sbjct: 161 ttattt 166
to top
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 87    ataatgagctggctccctgtgctctgattgattntttg 124
             |||| ||| |||||||||||||||||||| ||| ||||
Sbjct: 12324 ataaggagatggctccctgtgctctgattcattatttg 12287
to top
>emb|AJ429660.1|PRH429660 Pelliciera rhizophorae chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1496

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 51  atcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgtgctc 110
           |||||||||||| ||||| || ||||| || |||| |||| ||| |||||||  ||||||
Sbjct: 110 atcagttagtccgccatattttttcttgacagaaaaataaggagatggctccacgtgctc 169

                        
Query: 111 tgattgattnttt 123
            |||| ||| |||
Sbjct: 170 ggattcattattt 182
to top
>emb|AJ429659.1|TGY429659 Ternstroemia gymnanthera chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1488

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgatt 115
           ||||| ||||| || ||||| || |||| |||| ||| |||||||| |||||||||||
Sbjct: 126 agtccgccatattttttcttgacagaaaaataaggagatggctccccgtgctctgatt 183
to top
>emb|AJ429642.1|DKA429642 Diospyros kaki chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1497

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 64  ccatagttnttctttacggaaagataatgagctggctccctgtgctctgattgattnttt 123
           ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| ||| |||
Sbjct: 128 ccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattcattattt 187

            
Query: 124 g 124
           |
Sbjct: 188 g 188
to top
>emb|AJ429528.1|TSP429528 Tetramerista sp. Coode 7925 chloroplast atpE gene (partial),
           tRNA-Met gene and tRNA-Val gene
          Length = 1503

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 51  atcagttagtccaccatagttnttctttacggaaagataatgagctggctccctgtgctc 110
           |||||||||||| ||||| || ||||| || |||| |||| ||| |||||||  ||||||
Sbjct: 91  atcagttagtccgccatattttttcttgacagaaaaataaggagatggctccacgtgctc 150

                        
Query: 111 tgattgattnttt 123
            |||| ||| |||
Sbjct: 151 ggattcattattt 163
to top
>emb|AJ429675.1|GSE429675 Gelsemium sempervirens chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1435

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 154 aagataaggagatggctccatgtgctctgattcattatttg 194
to top
>emb|AJ430388.1|PFR430388 Proboscidea fragrans chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 156 aagataaggagatggctccatgtgctctgattcattatttg 196
to top
>emb|AJ429700.1|PPR429700 Polypremum procumbens chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1502

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 83  aaagataatgagctggctccctgtgctctgattgattnttt 123
           |||||||| ||| ||||||| |||||||||||| ||| |||
Sbjct: 152 aaagataaagagatggctccatgtgctctgattcatttttt 192
to top
>emb|AJ429699.1|STH429699 Selago thomsoni chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1518

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 157 aagataaggagatggctccatgtgctctgattcattatttg 197
to top
>emb|AJ429698.1|MMO429698 Myoporum montanum chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1498

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 aagataaggagatggctccatgtgctctgattcattatttg 193
to top
>emb|AJ429697.1|BAS429697 Buddleja asiatica chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1498

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 155 aagataaggagatggctccatgtgctctgattcattatttg 195
to top
>emb|AJ429696.1|SPA429696 Schlegelia parviflora chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1490

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 aagataaagagatggctccatgtgctctgattcattatttg 193
to top
>emb|AJ429692.1|PLE429692 Phryma leptostachya chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1501

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 aagataaggagatggctccatgtgctctgattcattatttg 193
to top
>emb|AJ429691.1|SOR429691 Sesamum orientale chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1497

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 aagataaggagatggctccatgtgctctgattcattatttg 193
to top
>emb|AJ429690.1|PTO429690 Paulownia tomentosa chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1492

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 156 aagataaggagatggctccatgtgctctgattcattatttg 196
to top
>emb|AJ429688.1|CSO429688 Cyclocheilon somaliense chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1485

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 157 aagataaggagatggctccatgtgctctgattcattatttg 197
to top
>emb|AJ429681.1|JMI429681 Jacaranda mimosifolia chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1499

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 aagataaggagatggctccatgtgctctgattcattatttg 193
to top
>emb|AJ429679.1|ALO429679 Acanthus longifolius chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1452

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 154 aagataaggagatggctccgtgtgctctgattcattatttg 194
to top
>emb|AJ429671.1|VCA429671 Vahlia capensis chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1503

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 84  aagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 154 aagataaggagatggctccatgtgctctgattcattatttg 194
to top
>emb|AJ429652.1|MZA429652 Manilkara zapota chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1472

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 64  ccatagttnttctttacggaaagataatgagctggctccctgtgctctgattgattnttt 123
           ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| ||| |||
Sbjct: 129 ccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattcattcttt 188
to top
>emb|AJ429651.1|RGO429651 Roridula gorgonias chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1510

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 64  ccatagttnttctttacggaaagataatgagctggctccctgtgctctgattgattnttt 123
           ||||| || ||||| || |||| |||| ||| |||||||| ||||||||||| ||| |||
Sbjct: 128 ccatattttttcttgacagaaaaataaggagatggctccccgtgctctgattcattattt 187
to top
>emb|AJ429701.1|VRI429701 Verbena rigida chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1491

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 67/83 (80%), Gaps = 5/83 (6%)
 Strand = Plus / Plus

                                                                       
Query: 47  aaagatcagttagtccaccatagttnttctttacgga-----aagataatgagctggctc 101
           |||||||||||| ||||||||| || ||||| || ||     ||||||| ||| ||||||
Sbjct: 111 aaagatcagttaatccaccatattttttcttgacagaaaaagaagataaggagatggctc 170

                                  
Query: 102 cctgtgctctgattgattntttg 124
           | ||||||| |||| ||| ||||
Sbjct: 171 catgtgctcggattcattatttg 193
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>emb|AJ429663.1|TAM429663 Theophrasta americana chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1478

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 64  ccatagttnttctttacggaaagataatgagctggctccctgtgctctgatt 115
           ||||| || ||||| || |||| |||| ||| |||||||| |||||||||||
Sbjct: 135 ccatattttttcttgacagaaaaataaagagatggctccccgtgctctgatt 186
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>emb|AJ429649.1|PPU429649 Polemonium pulcherrimum chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1499

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 73  ttctttacggaaagataatgagctggctccctgtgctctgattgattntttg 124
           ||||| || |||| |||| ||| |||||||| ||||||||||| ||| ||||
Sbjct: 137 ttcttgacagaaaaataaggagatggctccccgtgctctgattcattatttg 188
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>emb|AJ429646.1|MSP429646 Marcgravia sp. Anderberg s.n. chloroplast atpE gene (partial),
           tRNA-Val gene (partial) and tRNA-Met gene
          Length = 1505

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 55/67 (82%)
 Strand = Plus / Plus

                                                                       
Query: 58  agtccaccatagttnttctttacggaaagataatgagctggctccctgtgctctgattga 117
           ||||| ||||| || ||||| || |||| |||| ||| |||||||  ||||||||||| |
Sbjct: 124 agtccgccatattttttcttgacagaaaaataaggagatggctccacgtgctctgattca 183

                  
Query: 118 ttntttg 124
           || ||||
Sbjct: 184 ttatttg 190
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>emb|AJ429644.1|BAS429644 Barringtonia asiatica chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1529

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 73  ttctttacggaaagataatgagctggctccctgtgctctgattgattntttg 124
           ||||| || |||| |||| ||| |||||||| ||||||||||| ||| ||||
Sbjct: 143 ttcttgacagaaaaataaggagatggctccccgtgctctgattcattatttg 194
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>emb|AJ429634.1|DSI429634 Dipentodon sinicus chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1563

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 72/89 (80%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 46  taaagatcagttagtccaccatagttntt-ctttacggaaagataatgagctggctccct 104
           |||| |||||| |||| |||||| || || ||| || |||||||||  || ||||||| |
Sbjct: 111 taaatatcagtcagtctaccatatttttttcttaacagaaagataagaagatggctccat 170

                                        
Query: 105 gtgctctgattgattntttgnnttatgat 133
           ||||||||||| ||| || |  |||||||
Sbjct: 171 gtgctctgattcattattcggattatgat 199
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>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence
          Length = 220762

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     atgagctggctccctgtgct 109
              ||||||||||||||||||||
Sbjct: 206862 atgagctggctccctgtgct 206881
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>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 47    aaagatcagttagtccaccatagttnttctt 77
             ||||||||||||||| |||||| || |||||
Sbjct: 50217 aaagatcagttagtctaccatattttttctt 50247
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>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 82    gaaagataatgagctggctccctgtgct 109
             ||||||||||||||| | ||||||||||
Sbjct: 85819 gaaagataatgagctcgatccctgtgct 85846
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>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 84    aagataatgagctggctccctgtgctctgatt 115
             |||||||| || ||||||| ||||||||||||
Sbjct: 53078 aagataataagatggctccatgtgctctgatt 53109
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>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 47    aaagatcagttagtccaccatagttnttctt 77
             ||||||||||||||| |||||| || |||||
Sbjct: 51333 aaagatcagttagtctaccatattttttctt 51363
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>gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, complete sequence
          Length = 206640

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   atgagctggctccctgtgct 109
            ||||||||||||||||||||
Sbjct: 1342 atgagctggctccctgtgct 1361
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>emb|AJ429670.1|PBU429670 Plocosperma buxifolium chloroplast atpE gene (partial), tRNA-Val
           gene (partial) and tRNA-Met gene
          Length = 1506

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 84  aagataatgagctggctccctgtgctctgatt 115
           ||||||| ||| ||||||| ||||||||||||
Sbjct: 154 aagataaggagatggctccatgtgctctgatt 185
to top
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53933 aaagataaggaaatggctccatgtgctctgattcattatttg 53974
to top
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53575 aaagataaggaaatggctccatgtgctctgattcattatttg 53616
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>gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, complete sequence
          Length = 160392

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   tccctgtgctctgattgat 118
             |||||||||||||||||||
Sbjct: 61649 tccctgtgctctgattgat 61631
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>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 52871 aaagataaggaaatggctccatgtgctctgattcattatttg 52912
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>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53023 aaagataaggaaatggctccatgtgctctgattcattatttg 53064
to top
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53019 aaagataaggaaatggctccatgtgctctgattcattatttg 53060
to top
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 52957 aaagataaggaaatggctccatgtgctctgattcattatttg 52998
to top
>gb|AC124121.18| Mus musculus chromosome 8, clone RP23-169B14, complete sequence
          Length = 225779

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    ccctgtgctctgattgatt 119
              |||||||||||||||||||
Sbjct: 151071 ccctgtgctctgattgatt 151089
to top
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 98782

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    gccttaaagatcagttagt 60
             |||||||||||||||||||
Sbjct: 97792 gccttaaagatcagttagt 97774
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>emb|AL731755.4|CNS08C84 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1387_F06
           of library Monsanto from chromosome 12 of cultivar
           Nipponbare of ssp. japonica of Oryza sativa (rice),
           complete sequence
          Length = 7101

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  gccttaaagatcagttagt 60
           |||||||||||||||||||
Sbjct: 999 gccttaaagatcagttagt 981
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>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53931 aaagataaggaaatggctccatgtgctctgattcattatttg 53972
to top
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 53835 aaagataaggaaatggctccatgtgctctgattcattatttg 53876
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>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 83    aaagataatgagctggctccctgtgctctgattgattntttg 124
             |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 52877 aaagataaggaaatggctccatgtgctctgattcattatttg 52918
to top
>emb|AJ429674.1|ASC429674 Alstonia scholaris chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1530

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                     
Query: 83  aaagataatgagctggctccctgtgctctgattgattntttg 124
           ||||||||  || ||||||| |||||||||||| ||| ||||
Sbjct: 154 aaagataagtagatggctccatgtgctctgattcattatttg 195
to top
>emb|AJ429668.1|ISE429668 Icacina senegalensis chloroplast atpE gene (partial), tRNA-Val gene
           (partial) and tRNA-Met gene
          Length = 1559

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 33/38 (86%)
 Strand = Plus / Plus

                                                 
Query: 87  ataatgagctggctccctgtgctctgattgattntttg 124
           |||| ||| ||||||| |||||||||||| ||| ||||
Sbjct: 153 ataaggagatggctccatgtgctctgattcattatttg 190
to top
>gb|K01727.1|TOBCPTGMV Tobacco (N.tabacum) chloroplast Met-tRNA, Val-tRNA-uac and flanks
          Length = 1106

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 36/42 (85%)
 Strand = Plus / Minus

                                                     
Query: 83  aaagataatgagctggctccctgtgctctgattgattntttg 124
           |||||||| ||  ||||||| |||||||||||| ||| ||||
Sbjct: 790 aaagataaggaaatggctccatgtgctctgattcattatttg 749


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 516,904
Number of Sequences: 3902068
Number of extensions: 516904
Number of successful extensions: 32352
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32136
Number of HSP's gapped (non-prelim): 208
length of query: 142
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 121
effective length of database: 17,151,101,840
effective search space: 2075283322640
effective search space used: 2075283322640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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