ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22o22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subuni... 67 2e-11
2RUBB_ARATH (P21240) RuBisCO large subunit-binding protein subuni... 64 3e-10
3RUBB_PEA (P08927) RuBisCO large subunit-binding protein subunit ... 62 1e-09
4RUBB_BRANA (P21241) RuBisCO large subunit-binding protein subuni... 47 3e-05
5RUBB_CHLRE (Q42693) RuBisCO large subunit-binding protein subuni... 41 0.002
6RUBC_CHLRE (Q42695) RuBisCO large subunit-binding protein subuni... 39 0.007
7CH60_CLOBO (Q8KJ24) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 33 0.50
8CH60_BARHE (O33963) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 33 0.65
9CH602_PARUW (Q6MBZ5) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 33 0.65
10CH60_BACFO (P81284) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 0.85
11CH60_COREQ (Q93QI2) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 0.85
12CH60_CLOTE (Q891G4) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 1.1
13CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 32 1.1
14CH602_NOCFA (Q9AFA6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 32 1.1
15CH60_BARQU (O33964) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 1.4
16CH60_LEPIN (P61439) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 1.4
17CH60_LEPIC (P61438) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 32 1.4
18CH602_MYCPA (P42384) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 32 1.4
19CH60_NEIMB (P42385) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
20CH60_NEIGO (P29842) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
21CH60_NEIG1 (Q5F541) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
22CH60_BACHK (Q6HPC7) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
23CH60_BACCZ (Q63GV7) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
24CH60_BACCR (Q814B0) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
25CH60_BACC1 (Q73ER9) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
26CH60_BACAN (Q81VE1) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
27CH60_PONPY (Q5NVM5) 60 kDa heat shock protein, mitochondrial pre... 31 2.5
28CH60_HUMAN (P10809) 60 kDa heat shock protein, mitochondrial pre... 31 2.5
29CH60_THEBR (Q60024) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
30CH60_CLOPE (P26821) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 31 2.5
31CH60_ACIAD (Q6F8P6) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 3.2
32CH60_TSUTY (P97086) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 3.2
33CH60_CLOAB (P30717) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 3.2
34CH60_STAEQ (Q5HMZ1) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
35CH603_METCA (Q7WZ32) 60 kDa chaperonin 3 (Protein Cpn60 3) (groE... 30 4.2
36CH60_STAES (P0C0N7) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
37CH60_STAEP (P0C0N6) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
38CH60_STAAW (P63767) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
39CH60_STAAU (Q08854) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
40CH60_STAAS (Q6G7S8) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
41CH60_STAAR (Q6GF43) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
42CH60_STAAN (P99083) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
43CH60_STAAM (P63766) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
44CH60_STAAC (Q5HEH2) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 4.2
45HIP_THIPF (P00263) High-potential iron-sulfur protein (HiPIP) 30 4.2
46CH60_NEIMA (P57006) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 30 5.5
47CH60_NEIFL (P48215) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 7.2
48CH60_BACHD (O50305) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 7.2
49CH601_SYNVU (O50323) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE... 29 7.2
50RUB2_BRANA (P34794) RuBisCO large subunit-binding protein subuni... 29 7.2
51CH60_BIFAN (Q93M78) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 7.2
52RUBA_ARATH (P21238) RuBisCO large subunit-binding protein subuni... 29 7.2
53RUB1_BRANA (P21239) RuBisCO large subunit-binding protein subuni... 29 7.2
54CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 7.2
55MHP1_YEAST (P43638) MAP-homologous protein 1 29 7.2
56CH601_CHLCV (P15599) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE... 29 9.3
57CH602_SYNP6 (Q5N3T6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 29 9.3
58CH602_CHRVO (Q7NQX1) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 29 9.3
59CH60_RICTY (O85754) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 9.3
60CH60_RICPR (Q9ZCT7) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 9.3
61CH60_CLODI (Q9KKF0) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 9.3
62CH60_LEIXX (Q6ADK2) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 9.3
63CH60_BRECH (Q8RU00) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 9.3 
>RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta,|
           chloroplast (60 kDa chaperonin subunit beta) (CPN-60
           beta) (Fragment)
          Length = 499

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYGF 384
           +VVRCCL HAASVAKTF+TSDVVVV+I+  +  P+ NPM  SG+G+
Sbjct: 454 KVVRCCLEHAASVAKTFLTSDVVVVEIKEPEAAPLANPMDNSGFGY 499
to top
>RUBB_ARATH (P21240) RuBisCO large subunit-binding protein subunit beta,|
           chloroplast precursor (60 kDa chaperonin subunit beta)
           (CPN-60 beta)
          Length = 600

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYGF 384
           +VVRCCL HAASVAKTF+ SD VVV+I+  +  PV NPM  SGYG+
Sbjct: 555 KVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY 600
to top
>RUBB_PEA (P08927) RuBisCO large subunit-binding protein subunit beta,|
           chloroplast precursor (60 kDa chaperonin subunit beta)
           (CPN-60 beta)
          Length = 595

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVRCCL HA+SVAKTF+ SD VVV+I+  +  PV NPM  SGYG
Sbjct: 549 KVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAPVGNPMDNSGYG 593
to top
>RUBB_BRANA (P21241) RuBisCO large subunit-binding protein subunit beta,|
           chloroplast precursor (60 kDa chaperonin subunit beta)
           (CPN-60 beta)
          Length = 588

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTP 420
           +VVRCCL HAASVAKTF+ SD VVV+I+  +  P
Sbjct: 555 KVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVP 588
to top
>RUBB_CHLRE (Q42693) RuBisCO large subunit-binding protein subunit beta-1 (60|
           kDa chaperonin subunit beta-1) (CPN-60 beta-1)
           (Fragment)
          Length = 435

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYGF 384
           +VVRC + +A SVAKTF+ +DVVV +++  +     NP+     GF
Sbjct: 386 KVVRCSMENAVSVAKTFLLADVVVTELKEIEAGAKPNPVAPGAAGF 431
to top
>RUBC_CHLRE (Q42695) RuBisCO large subunit-binding protein subunit beta-2 (60|
           kDa chaperonin subunit beta-2) (CPN-60 beta-2)
           (Fragment)
          Length = 259

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +VVRC L +A SVAKTF+ +DVVV +I   +  P   P  G G
Sbjct: 217 KVVRCSLENAVSVAKTFLLADVVVTEIPEKEKAPA--PAAGGG 257
to top
>CH60_CLOBO (Q8KJ24) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AASVA TF+T++ VV +I      P    M G G
Sbjct: 496 KVTRSALQNAASVASTFLTTECVVAEIPEKNPAPQAPGMGGMG 538
to top
>CH60_BARHE (O33963) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 547

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L +AAS+A   IT++ +V ++   K TP V PM G G G
Sbjct: 498 KVVRSALQNAASIASLLITTEAMVAEV-PKKDTP-VPPMPGGGMG 540
to top
>CH602_PARUW (Q6MBZ5) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 540

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTP 420
           +VVRC L +A SVA   +T++ +V DI   K  P
Sbjct: 499 KVVRCALENAVSVAAMLLTTEAIVADIPEEKPAP 532
to top
>CH60_BACFO (P81284) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCG 399
           +V R  L +AAS+A  F+T++ VV D +     P +NP  G
Sbjct: 497 KVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMG 537
to top
>CH60_COREQ (Q93QI2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 541

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AAS+A  F+T++ VV D       P+ +P  G G
Sbjct: 495 KVTRSALQNAASIAALFLTTEAVVADKPEKAAAPMGDPTGGMG 537
to top
>CH60_CLOTE (Q891G4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPV 417
           +V R  L +AASVA TF+T++  + DI     TP+
Sbjct: 498 KVSRSALQNAASVASTFLTTEAAIADIPEKNDTPM 532
to top
>CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
           (65 kDa antigen)
          Length = 540

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AAS+A  F+T++ VV D       P  +P  G G
Sbjct: 494 KVTRSALQNAASIAGLFLTTEAVVADKPEKTAAPASDPTGGMG 536
to top
>CH602_NOCFA (Q9AFA6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
           (Heat shock protein 60)
          Length = 541

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AAS+A  F+T++ VV D       P  +P  G G
Sbjct: 495 KVTRSALQNAASIAALFLTTEAVVADKPEKAAAPAGDPTGGMG 537
to top
>CH60_BARQU (O33964) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 547

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L +AAS+A   IT++ +V ++   K TP + PM G G G
Sbjct: 498 KVVRSALQNAASIASLLITTEAMVAEV-PKKDTP-MPPMPGGGMG 540
to top
>CH60_LEPIN (P61439) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock 58 kDa protein)
          Length = 546

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L +AAS+    +T++V + D +  K  P  NPM G G G
Sbjct: 496 KVVRSALQNAASIGSMILTTEVTITD-KPDKDAP--NPMAGMGGG 537
to top
>CH60_LEPIC (P61438) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock 58 kDa protein)
          Length = 546

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L +AAS+    +T++V + D +  K  P  NPM G G G
Sbjct: 496 KVVRSALQNAASIGSMILTTEVTITD-KPDKDAP--NPMAGMGGG 537
to top
>CH602_MYCPA (P42384) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
           (65 kDa antigen) (Heat shock protein 65)
          Length = 540

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AAS+A  F+T++ VV D       P  +P  G G
Sbjct: 494 KVTRSALQNAASIAGLFLTTEAVVADKPEKAAAPAGDPTGGMG 536
to top
>CH60_NEIMB (P42385) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa|
           stress protein) (GSP63) (HSP60)
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAAS+A   +T+D ++ +I   K  P V  M G G
Sbjct: 498 KVTRSALQHAASIAGLMLTTDCMIAEIPEDK--PAVPDMGGMG 538
to top
>CH60_NEIGO (P29842) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa|
           stress protein) (GSP63)
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAAS+A   +T+D ++ +I   K  P V  M G G
Sbjct: 498 KVTRSALQHAASIAGLMLTTDCMIAEIPEEK--PAVPDMGGMG 538
to top
>CH60_NEIG1 (Q5F541) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAAS+A   +T+D ++ +I   K  P V  M G G
Sbjct: 498 KVTRSALQHAASIAGLMLTTDCMIAEIPEEK--PAVPDMGGMG 538
to top
>CH60_BACHK (Q6HPC7) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AASVA  F+T++ VV D +     P +  M G G G
Sbjct: 495 KVTRSALQNAASVAAMFLTTEAVVAD-KPEPNAPAMPDMGGMGMG 538
to top
>CH60_BACCZ (Q63GV7) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AASVA  F+T++ VV D +     P +  M G G G
Sbjct: 495 KVTRSALQNAASVAAMFLTTEAVVAD-KPEPNAPAMPDMGGMGMG 538
to top
>CH60_BACCR (Q814B0) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AASVA  F+T++ VV D +     P +  M G G G
Sbjct: 495 KVTRSALQNAASVAAMFLTTEAVVAD-KPEPNAPAMPDMGGMGMG 538
to top
>CH60_BACC1 (Q73ER9) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AASVA  F+T++ VV D +     P +  M G G G
Sbjct: 495 KVTRSALQNAASVAAMFLTTEAVVAD-KPEPNAPAMPDMGGMGMG 538
to top
>CH60_BACAN (Q81VE1) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AASVA  F+T++ VV D +     P +  M G G G
Sbjct: 495 KVTRSALQNAASVAAMFLTTEAVVAD-KPEPNAPAMPDMGGMGMG 538
to top
>CH60_PONPY (Q5NVM5) 60 kDa heat shock protein, mitochondrial precursor (Hsp60)|
           (60 kDa chaperonin) (CPN60) (Heat shock protein 60)
           (HSP-60)
          Length = 573

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L  AA VA    T++VVV +I   +  P +  M G G G
Sbjct: 523 KVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGAMGGMGGG 567
to top
>CH60_HUMAN (P10809) 60 kDa heat shock protein, mitochondrial precursor (Hsp60)|
           (60 kDa chaperonin) (CPN60) (Heat shock protein 60)
           (HSP-60) (Mitochondrial matrix protein P1) (P60
           lymphocyte protein) (HuCHA60)
          Length = 573

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +VVR  L  AA VA    T++VVV +I   +  P +  M G G G
Sbjct: 523 KVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGAMGGMGGG 567
to top
>CH60_THEBR (Q60024) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCG 399
           +V R  L +AAS+A   +T++ +VVDI   K T + NP  G
Sbjct: 497 KVTRTALQNAASIASMILTTEAIVVDI-PEKNTGMPNPGAG 536
to top
>CH60_CLOPE (P26821) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 539

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L +AASVA TF+T++  V DI
Sbjct: 496 KVTRSALQNAASVASTFLTTEAAVADI 522
to top
>CH60_ACIAD (Q6F8P6) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAASVA   +T++ ++ DI   K  P +  M G G
Sbjct: 498 KVTRSALEHAASVAGLMLTTEAMITDIPEDK--PAMPDMGGMG 538
to top
>CH60_TSUTY (P97086) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 539

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L +AAS+A  F+T++ VV D +  K    V+P  G G
Sbjct: 494 KVTRSALQNAASIAALFLTTEAVVAD-KPEKAGAPVDPTGGMG 535
to top
>CH60_CLOAB (P30717) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L +AASVA TF+T++  V DI
Sbjct: 496 KVTRSALQNAASVASTFLTTECAVADI 522
to top
>CH60_STAEQ (Q5HMZ1) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 539

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH603_METCA (Q7WZ32) 60 kDa chaperonin 3 (Protein Cpn60 3) (groEL protein 3)|
          Length = 559

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V+R  L  AASVA TF+T++ VV++I
Sbjct: 510 KVLRLALEKAASVAGTFLTTEAVVLEI 536
to top
>CH60_STAES (P0C0N7) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 494 KVTRSALQHAASVAAMFLTTEAVVASI 520
to top
>CH60_STAEP (P0C0N6) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 494 KVTRSALQHAASVAAMFLTTEAVVASI 520
to top
>CH60_STAAW (P63767) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAU (Q08854) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAS (Q6G7S8) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAR (Q6GF43) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAN (P99083) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAM (P63766) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>CH60_STAAC (Q5HEH2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 538

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L HAASVA  F+T++ VV  I
Sbjct: 495 KVTRSALQHAASVAAMFLTTEAVVASI 521
to top
>HIP_THIPF (P00263) High-potential iron-sulfur protein (HiPIP)|
          Length = 81

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 405 HRVHNRSALRHPYVDDNNVRGDESFCHRCSMLQA 506
           H + + +A     V    + G E FCH CS +QA
Sbjct: 18  HYIEDANASERNPVTKTELPGSEQFCHNCSFIQA 51
to top
>CH60_NEIMA (P57006) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa|
           stress protein) (GSP63) (HSP60)
          Length = 544

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAAS+A   +T+D ++ +I   K  P +  M G G
Sbjct: 498 KVTRSALQHAASIAGLMLTTDCMIAEIPEDK--PAMPDMGGMG 538
to top
>CH60_NEIFL (P48215) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa|
           stress protein) (GSP63)
          Length = 544

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAAS+A   +T+D ++ +I   K  P +  M G G
Sbjct: 498 KVTRSALQHAASIAGLMLTTDCMIAEIPERK--PAMPDMGGMG 538
to top
>CH60_BACHD (O50305) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVD 444
           +V R  L HAASV+  F+T++ V+ D
Sbjct: 495 KVTRSALQHAASVSAMFLTTEAVIAD 520
to top
>CH601_SYNVU (O50323) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 544

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AAS+A   +T++ ++VD    K  P  N   GSG G
Sbjct: 497 KVTRSALQNAASIAGMVLTTECIIVD----KPEPKENNPAGSGAG 537
to top
>RUB2_BRANA (P34794) RuBisCO large subunit-binding protein subunit alpha,|
           chloroplast precursor (60 kDa chaperonin subunit alpha)
           (CPN-60 alpha)
          Length = 583

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVD 444
           +V RC L +AASVA   +T+  +VVD
Sbjct: 541 KVTRCALQNAASVAGMVLTTQAIVVD 566
to top
>CH60_BIFAN (Q93M78) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat|
           shock protein 60)
          Length = 537

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYGF 384
           +V R  L +AAS+A  F+T++ VV     +K  P   P  G   G+
Sbjct: 496 KVTRSALQNAASIAGLFLTTEAVV----ANKPEPAAAPAAGHNMGY 537
to top
>RUBA_ARATH (P21238) RuBisCO large subunit-binding protein subunit alpha,|
           chloroplast precursor (60 kDa chaperonin subunit alpha)
           (CPN-60 alpha)
          Length = 586

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVD 444
           +V RC L +AASVA   +T+  +VVD
Sbjct: 544 KVTRCALQNAASVAGMVLTTQAIVVD 569
to top
>RUB1_BRANA (P21239) RuBisCO large subunit-binding protein subunit alpha,|
           chloroplast precursor (60 kDa chaperonin subunit alpha)
           (CPN-60 alpha) (Fragment)
          Length = 546

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVD 444
           +V RC L +AASVA   +T+  +VVD
Sbjct: 504 KVTRCALQNAASVAGMVLTTQAIVVD 529
to top
>CH60_SYNEL (Q8DMD4) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 545

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSGYG 387
           +V R  L +AAS+A   +T++ ++VD    K  P  N   GSG G
Sbjct: 498 KVTRSALQNAASIAGMVLTTECIIVD----KPEPKENNPAGSGAG 538
to top
>MHP1_YEAST (P43638) MAP-homologous protein 1|
          Length = 1398

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -1

Query: 161  LCVLDHLKSLIVTNSPYLFVTCVF*MIIKMVKTMLPLG*LFVNLRSMYV 15
            LC L++LK L ++N+P +F  C        V T++    +FVNL  +++
Sbjct: 924  LCYLENLKFLDISNNPAIFPHC--------VPTLIDFLPVFVNLVRLHI 964
to top
>CH601_CHLCV (P15599) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
           (57 kDa chlamydial hypersensitivity antigen)
          Length = 544

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSK 429
           +V RC L  AASVA   +T++ ++ DI   K
Sbjct: 500 KVTRCALESAASVAGLLLTTEALIADIPEEK 530
to top
>CH602_SYNP6 (Q5N3T6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 555

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVD 444
           +VVR  L  AASVA   +T++V+VVD
Sbjct: 499 KVVRSALQDAASVASLILTTEVLVVD 524
to top
>CH602_CHRVO (Q7NQX1) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 546

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCGSG 393
           +V R  L HAASVA   +T+D ++ ++   K    +  M G G
Sbjct: 498 KVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMG 540
to top
>CH60_RICTY (O85754) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 550

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCG 399
           +VVR  L  AASVA   IT++ ++VD    K  P+  PM G
Sbjct: 499 KVVRTALQDAASVASLIITTETLIVDEPSDKEEPM--PMRG 537
to top
>CH60_RICPR (Q9ZCT7) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 550

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCG 399
           +VVR  L  AASVA   IT++ ++VD    K  P+  PM G
Sbjct: 499 KVVRTALQDAASVASLIITTETLIVDEPSDKEEPM--PMRG 537
to top
>CH60_CLODI (Q9KKF0) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDI 441
           +V R  L +AAS+A TF+T++  V D+
Sbjct: 497 KVSRSALQNAASIASTFLTTEAAVADL 523
to top
>CH60_LEIXX (Q6ADK2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 539

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPV 417
           +V R  L +AAS+A  F+T++ VV D +  K  PV
Sbjct: 496 KVTRSALQNAASIAGLFLTTEAVVAD-KPEKAAPV 529
to top
>CH60_BRECH (Q8RU00) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 521 QVVRCCLXHAASVAKTFITSDVVVVDIRVSKCTPVVNPMCG 399
           +V R  L +AASVA  F+T++ V+ D       P+  P  G
Sbjct: 495 KVTRSALSNAASVAAMFLTTEAVIADKPEENKAPMGMPDMG 535


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,556,826
Number of Sequences: 219361
Number of extensions: 1409219
Number of successful extensions: 2959
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 2911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2959
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top