Clone Name | rbasd22o13 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_197747.1| Oryza sativa (japonica cultivar-group) putative monosaccharide transporter (OSJNBa0042H09.10), mRNA Length = 1557 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Minus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1514 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 1455 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 1454 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 1395 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 1394 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 1335 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 1334 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 1275 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 1274 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 1215 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 1214 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 1155 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 1154 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 1102
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Plus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2116 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 2175 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 2176 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 2235 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 2236 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 2295 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 2296 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 2355 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 2356 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 2415 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 2416 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 2475 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 2476 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 2528
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Minus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 39845 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 39786 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 39785 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 39726 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 39725 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 39666 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 39665 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 39606 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 39605 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 39546 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 39545 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 39486 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 39485 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 39433
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Minus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21607941 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 21607882 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 21607881 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 21607822 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 21607821 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 21607762 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 21607761 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 21607702 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 21607701 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 21607642 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 21607641 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 21607582 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 21607581 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 21607529
>dbj|AK068343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148F21, full insert sequence Length = 1927 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Minus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1688 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 1629 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 1628 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 1569 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 1568 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 1509 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 1508 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 1449 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 1448 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 1389 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 1388 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 1329 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 1328 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 1276
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 311 bits (157), Expect = 2e-81 Identities = 349/413 (84%) Strand = Plus / Minus Query: 211 tcctccccaacaatcttcttccagaaccaatgcctcctccagacctgctccatctgctcc 270 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21619604 tcctcccctacaatcttcttccagaaccaatgcttcctccagacctgctccatctgctcc 21619545 Query: 271 atgggaagcttcttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatc 330 ||||| |||||||| ||||| |||||||| | || || | | ||||||| ||| ||| Sbjct: 21619544 atgggcagcttctttgtctccggcaggaagaaataaacaaacactgtcatcaagcagatc 21619485 Query: 331 cacgcggcaaagacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtc 390 || | ||||||| |||||| ||||| |||| ||||||||| || ||||| || || ||| Sbjct: 21619484 catcctgcaaagaagaagaatgtccctgacttgatgcggcatagaactgcaaggaatgtc 21619425 Query: 391 tggccgatcacaaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgat 450 || || |||||||| ||||||| ||||||||| || || ||||| ||||||||||||||| Sbjct: 21619424 tgtccaatcacaaatgtcatcaggaagaccactgcaacaacaatactctgccctgctgat 21619365 Query: 451 ctgatctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccat 510 |||||||| ||||| || |||||||| ||||| | ||| || | ||| |||||||||||| Sbjct: 21619364 ctgatctcaagtggacatatctcagttgggaccaagaatgtcaatggcccccatgaccat 21619305 Query: 511 gcaaagcccgccacaaacacgcacatggtgatcaacacaaggaaagcatagtccttatcc 570 |||||||| || |||||||| ||||||||||||||||||||| ||||||| || | ||| Sbjct: 21619304 gcaaagccagcaacaaacacacacatggtgatcaacacaaggtaagcatactctctgtcc 21619245 Query: 571 atcaaaccagagtccttgaactttgcagctaggatggcgccgacagcgagctg 623 || | ||| |||||||||||| |||||| ||||| || || ||||| ||||| Sbjct: 21619244 atggatccatagtccttgaactctgcagccaggattgcacccacagcaagctg 21619192
>gb|AY683007.1| Zea mays monosaccharide transport protein 4 (MST4) gene, partial cds Length = 246 Score = 178 bits (90), Expect = 1e-41 Identities = 198/234 (84%) Strand = Plus / Minus Query: 282 cttggtctctggcaggaacaggtagaccactagcgtcatcacgcaaatccacgcggcaaa 341 ||||||||| ||||||||||| || || | | |||||||| ||| ||||| | | || Sbjct: 237 cttggtctcaggcaggaacagataaacgaacaacgtcatcaggcagatccatccaccgaa 178 Query: 342 gacgaagaacgtccccgactcgatgcggcagaggactgccagaaacgtctggccgatcac 401 ||||||||||||| |||||| ||||||||||||||| | ||||||||||||| ||||| Sbjct: 177 gacgaagaacgtcgccgacttgatgcggcagaggacctcaagaaacgtctggctaatcac 118 Query: 402 aaacgtcatcaagaagaccacggcgaccacaatgctctgccctgctgatctgatctccag 461 ||||||||||||||| ||||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 117 aaacgtcatcaagaaaaccacagcgaccacgatgctctgccccgcggacctgatctccag 58 Query: 462 tgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 ||||||| ||| | ||||| | ||| ||||| |||||||||||||||||||| Sbjct: 57 cgggcagacctcggcagggaccaagaaggtgagaggtccccatgaccatgcaaa 4
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 95005 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 95064 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 95065 tctcagggaggaa 95077 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 95234 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 95293 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 95294 gcccgcgacgaagacgcacatg 95315
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 29005 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 29064 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 29065 tctcagggaggaa 29077 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 29234 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 29293 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 29294 gcccgcgacgaagacgcacatg 29315
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 30213 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 30154 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 30153 tctcagggaggaa 30141 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Minus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 29984 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 29925 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 29924 gcccgcgacgaagacgcacatg 29903
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 95005 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 95064 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 95065 tctcagggaggaa 95077 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 95234 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 95293 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 95294 gcccgcgacgaagacgcacatg 95315
>dbj|AK120679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162J03, full insert sequence Length = 1981 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 82 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 141 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 142 tctcagggaggaa 154 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 311 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 370 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 371 gcccgcgacgaagacgcacatg 392
>dbj|AK100524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100P07, full insert sequence Length = 2045 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 1644 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 1585 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 1584 tctcagggaggaa 1572 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Minus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 1415 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 1356 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 1355 gcccgcgacgaagacgcacatg 1334
>dbj|AK069891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037O19, full insert sequence Length = 2388 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 227 tcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagcttcttgg 286 ||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 1522 tcttccagaaccaatgcgtcctccagagctgatccatctgctccatgggcagctgcttgg 1463 Query: 287 tctctggcaggaa 299 |||| || ||||| Sbjct: 1462 tctcagggaggaa 1450 Score = 44.1 bits (22), Expect = 0.55 Identities = 67/82 (81%) Strand = Plus / Minus Query: 456 ctccagtgggcagatctcagtcgggacgaggaacgtgagtggtccccatgaccatgcaaa 515 |||||| ||||||||||| | ||||| ||| | ||||| || ||||| ||||| || || Sbjct: 1293 ctccagagggcagatctcggcggggaccaggtaggtgaggggcccccacgaccaggcgaa 1234 Query: 516 gcccgccacaaacacgcacatg 537 |||||| || || ||||||||| Sbjct: 1233 gcccgcgacgaagacgcacatg 1212
>gb|AY104890.1| Zea mays PCO071167 mRNA sequence Length = 1683 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 220 acaatcttcttccagaaccaatgcctcctccagacctgctccatctgctccatgggaagc 279 |||||| | ||||| ||||| || ||||||||||||| ||||||||||||||||| ||| Sbjct: 1400 acaatccttttccaaaaccagtgggtcctccagacctgttccatctgctccatgggcagc 1459 Query: 280 ttcttggtctctggcaggaa 299 | ||||||||| |||||||| Sbjct: 1460 tgcttggtctccggcaggaa 1479 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 435 gctctgccctgctgatctgatctccagtgggcagatctc 473 ||||||||| || || ||||||||||| ||||||||||| Sbjct: 1615 gctctgccccgccgacctgatctccagcgggcagatctc 1653
>gb|AY538261.1| Vitis vinifera hexose transporter (HT5) mRNA, complete cds Length = 1909 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 436 ctctgccctgctgatctgatctccagtgggcagatctcagtcgggacgaggaacgtgagt 495 |||||||||||||||| | ||||||||||| || ||||| | || | ||| | |||| Sbjct: 1325 ctctgccctgctgatcgggtctccagtgggaaggtctcacttggaatgagccaaccgagt 1266 Query: 496 ggtccccatgaccatgcaaagcccgccacaaa 527 || ||||| |||||||||||||| |||||||| Sbjct: 1265 ggcccccaagaccatgcaaagccggccacaaa 1234
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 tttcctttcttgcttctccttttc 200 |||||||||||||||||||||||| Sbjct: 8792 tttcctttcttgcttctccttttc 8769
>gb|AC124603.5| Mus musculus BAC clone RP23-52H14 from chromosome 14, complete sequence Length = 179891 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 tttcctttcttgcttctccttttc 200 |||||||||||||||||||||||| Sbjct: 133257 tttcctttcttgcttctccttttc 133234
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttcct 202 |||||||| |||||||||||||||||| Sbjct: 23149714 ttttccttccttgcttctccttttcct 23149740
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttcct 202 |||||||| |||||||||||||||||| Sbjct: 72813 ttttccttccttgcttctccttttcct 72839
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 ctccttttccttatcatcttcctccc 217 ||||||||| |||||||||||||||| Sbjct: 930922 ctccttttcattatcatcttcctccc 930897
>gb|AY538259.1| Vitis vinifera putative hexose transporter (HT3) mRNA, complete cds Length = 1737 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctca 474 |||||||| |||||||||| | ||||||||||| | |||||| Sbjct: 1354 atgctctgtcctgctgatcgggtctccagtgggaatatctca 1313
>ref|XM_572283.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH00890) partial mRNA Length = 952 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 ctccttttccttatcatcttcctccc 217 ||||||||| |||||||||||||||| Sbjct: 757 ctccttttcattatcatcttcctccc 732
>ref|XM_572284.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH00890) partial mRNA Length = 951 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 ctccttttccttatcatcttcctccc 217 ||||||||| |||||||||||||||| Sbjct: 756 ctccttttcattatcatcttcctccc 731
>gb|AY278948.1| Branchiostoma belcheri tsingtaunese proteasome alpha 4 subunit mRNA, complete cds Length = 1185 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 182 tttcttgcttctccttttcctt 203 |||||||||||||||||||||| Sbjct: 799 tttcttgcttctccttttcctt 778
>gb|AY854146.1| Vitis vinifera hexose transporter 7 (HT7) mRNA, complete cds Length = 1804 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctca 474 |||||||| |||||||||| | ||||||||||| | |||||| Sbjct: 1428 atgctctgtcctgctgatcgggtctccagtgggaatatctca 1387
>emb|BX072582.6| Zebrafish DNA sequence from clone DKEY-222O19 in linkage group 11, complete sequence Length = 194918 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 cacaaacacgcacatggtgatc 543 |||||||||||||||||||||| Sbjct: 89871 cacaaacacgcacatggtgatc 89892
>ref|XM_478702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctc 473 ||||||||||| || || ||||||||||| ||| ||||||| Sbjct: 1286 atgctctgccccgccgacctgatctccagcgggaagatctc 1246
>emb|CR932495.1|CNS0KY8V Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 atggaatacattcaaattcagaaat 153 |||||||||||| |||||||||||| Sbjct: 127 atggaatacattaaaattcagaaat 103
>gb|AY342322.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 6 (MST6) mRNA, complete cds Length = 1590 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctc 473 ||||||||||| || || ||||||||||| ||| ||||||| Sbjct: 1286 atgctctgccccgccgacctgatctccagcgggaagatctc 1246
>gb|AC149581.27| Medicago truncatula clone mth2-126m13, complete sequence Length = 102206 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 tccttttccttatcatcttcc 213 ||||||||||||||||||||| Sbjct: 67246 tccttttccttatcatcttcc 67266
>gb|AC092671.2| Homo sapiens BAC clone RP11-598I5 from 4, complete sequence Length = 164229 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 tacttacaaactcttctgctagtta 94 ||||||||||| ||||||||||||| Sbjct: 152523 tacttacaaacacttctgctagtta 152499
>gb|AF286207.1| Choristoneura fumiferana antifreeze protein isoform 339 precursor, mRNA, complete cds Length = 597 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 acctgctccatctgctccatg 273 ||||||||||||||||||||| Sbjct: 332 acctgctccatctgctccatg 352
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 9088504 caacccaactagatgtaatta 9088524 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 9037001 caacccaactagatgtaatta 9037021
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctc 473 ||||||||||| || || ||||||||||| ||| ||||||| Sbjct: 22300090 atgctctgccccgccgacctgatctccagcgggaagatctc 22300130
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 atgctctgccctgctgatctgatctccagtgggcagatctc 473 ||||||||||| || || ||||||||||| ||| ||||||| Sbjct: 105336 atgctctgccccgccgacctgatctccagcgggaagatctc 105376
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 59289 caacccaactagatgtaatta 59309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 7786 caacccaactagatgtaatta 7806
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 132100 caacccaactagatgtaatta 132120 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 caacccaactagatgtaatta 69 ||||||||||||||||||||| Sbjct: 80597 caacccaactagatgtaatta 80617
>gb|AY335224.1| Drosophila saltans heat shock protein 83 (Hsp83) gene, partial cds Length = 1065 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatc 209 ||||||||||||||||||||| Sbjct: 687 cttctccttttccttatcatc 667
>emb|AJ132225.1|LES132225 Lycopersicon esculentum mRNA for hexose transporter (HT3), partial Length = 878 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 atcttcttccagaaccaatgc 243 ||||||||||||||||||||| Sbjct: 656 atcttcttccagaaccaatgc 636
>emb|CT025675.12| Mouse DNA sequence from clone RP24-289M11 on chromosome 14, complete sequence Length = 147656 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttc 200 |||||||||||| |||||||||||| Sbjct: 57368 ttttcctttcttccttctccttttc 57392
>gb|AC108833.9| Mus musculus chromosome 14, clone RP23-263F4, complete sequence Length = 171398 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttc 200 |||||||||||| |||||||||||| Sbjct: 121133 ttttcctttcttccttctccttttc 121157
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence Length = 166329 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 ccaatgcctcctccagacctg 257 ||||||||||||||||||||| Sbjct: 71437 ccaatgcctcctccagacctg 71417
>emb|X85126.1|MMTYRP2X1 M.musculus Tyrp2 gene Length = 4173 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttc 200 |||||||||||| |||||||||||| Sbjct: 2166 ttttcctttcttccttctccttttc 2190
>emb|AL596258.15| Mouse DNA sequence from clone RP23-226P4 on chromosome 11, complete sequence Length = 219037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 aatgctctgccctgctgatct 452 ||||||||||||||||||||| Sbjct: 198332 aatgctctgccctgctgatct 198312
>dbj|AP001939.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2231G18, complete sequence Length = 147114 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 tacttacaaactcttctgctagtta 94 ||||||||||| ||||||||||||| Sbjct: 16788 tacttacaaacgcttctgctagtta 16764
>ref|NM_111470.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT3G05960 mRNA, complete cds Length = 1524 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggtccccatgaccatgcaaa 515 |||||||||||||||||||| Sbjct: 1199 ggtccccatgaccatgcaaa 1180
>gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome 13, complete sequence Length = 197469 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ttcctttcttgcttctccttttcc 201 |||||||||| ||||||||||||| Sbjct: 113700 ttcctttcttacttctccttttcc 113723
>gb|AC006729.1| Caenorhabditis elegans cosmid Y24D9A, complete sequence Length = 41172 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| ||| ||||||||| Sbjct: 5333 cttctccttttcctcatcctcttcctcc 5306
>ref|XM_324048.1| Neurospora crassa OR74A predicted protein (NCU04692.1) partial mRNA Length = 5781 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gtaggaactggcaacagcag 32 |||||||||||||||||||| Sbjct: 1560 gtaggaactggcaacagcag 1541
>ref|XM_955037.1| Neurospora crassa OR74A hypothetical protein (NCU04692.1) partial mRNA Length = 5781 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gtaggaactggcaacagcag 32 |||||||||||||||||||| Sbjct: 1560 gtaggaactggcaacagcag 1541
>ref|XM_955517.1| Neurospora crassa OR74A hypothetical protein (NCU08879.1) partial mRNA Length = 3444 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcttgcttctccttttcctt 203 |||||||||||||||||||| Sbjct: 3014 tcttgcttctccttttcctt 2995
>ref|XM_331270.1| Neurospora crassa OR74A hypothetical protein (NCU08879.1) partial mRNA Length = 3444 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcttgcttctccttttcctt 203 |||||||||||||||||||| Sbjct: 3014 tcttgcttctccttttcctt 2995
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence Length = 157998 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctggcaacagcagctgcagg 39 |||||||||||||||||||| Sbjct: 896 ctggcaacagcagctgcagg 877
>gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete sequence Length = 122855 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| ||| ||||||||| Sbjct: 31457 cttctccttttcctcatcctcttcctcc 31484
>gb|AC122050.3| Mus musculus BAC clone RP24-457L7 from chromosome 6, complete sequence Length = 179078 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatcttcctcc 216 ||||||||||||||| || ||||||||| Sbjct: 75162 cttctccttttccttctcctcttcctcc 75135
>gb|AC013454.6|ATAC013454 Arabidopsis thaliana chromosome III BAC F2O10 genomic sequence, complete sequence Length = 62271 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggtccccatgaccatgcaaa 515 |||||||||||||||||||| Sbjct: 35540 ggtccccatgaccatgcaaa 35521
>gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly factor) (MNAT1) gene, complete cds Length = 237446 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 tttcttgcttctccttttcc 201 |||||||||||||||||||| Sbjct: 160931 tttcttgcttctccttttcc 160950
>emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in linkage group 14, complete sequence Length = 182719 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 207 atcttcctccccaacaatcttcttccag 234 |||||||||| | ||||||||||||||| Sbjct: 168615 atcttcctcctccacaatcttcttccag 168642
>emb|AL713986.10| Mouse DNA sequence from clone RP23-142G13 on chromosome X, complete sequence Length = 204903 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 62869 tccttttccttttcatcttcctcc 62892
>ref|XM_674972.1| Plasmodium berghei strain ANKA N2,N2-dimethylguanosine tRNA methyltransferase (PB000555.02.0) partial mRNA Length = 2436 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 ttctccttttccttatcatcttcctccc 217 |||||||||||||| |||||||| |||| Sbjct: 923 ttctccttttccttttcatcttcatccc 896
>gb|AF067621.2| Caenorhabditis elegans cosmid F55F10, complete sequence Length = 30835 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| ||| ||||||||| Sbjct: 23968 cttctccttttcctcatcctcttcctcc 23941
>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete sequence Length = 205985 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctggcaacagcagctgcagg 39 |||||||||||||||||||| Sbjct: 117436 ctggcaacagcagctgcagg 117417
>ref|XM_797036.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 7 (LOC576276), mRNA Length = 2475 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1732 tccttttccttgtcatcttcctcc 1709
>ref|XM_797035.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 6 (LOC576276), mRNA Length = 2069 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1732 tccttttccttgtcatcttcctcc 1709
>ref|XM_797034.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 5 (LOC576276), mRNA Length = 2045 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1732 tccttttccttgtcatcttcctcc 1709
>ref|XM_776060.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 1 (LOC576276), mRNA Length = 2075 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1732 tccttttccttgtcatcttcctcc 1709
>ref|XM_797027.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 4 (LOC576276), mRNA Length = 1449 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1112 tccttttccttgtcatcttcctcc 1089
>ref|XM_797023.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 8, transcript variant 3 (LOC576276), mRNA Length = 1976 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tccttttccttatcatcttcctcc 216 ||||||||||| |||||||||||| Sbjct: 1642 tccttttccttgtcatcttcctcc 1619
>emb|BX842615.1| Neurospora crassa DNA linkage group V BAC clone B4B2 Length = 70741 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcttgcttctccttttcctt 203 |||||||||||||||||||| Sbjct: 23944 tcttgcttctccttttcctt 23925
>emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3 Length = 188557 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 atacattcaaattcagaaat 153 |||||||||||||||||||| Sbjct: 147948 atacattcaaattcagaaat 147967
>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete sequence Length = 82726 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 cttctccttttccttatcatcttcctcc 216 ||||||||||||||| || ||||||||| Sbjct: 54983 cttctccttttccttctcctcttcctcc 55010
>gb|AC161471.3| Gallus gallus BAC clone CH261-21B3 from chromosome ul, complete sequence Length = 205759 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cctcctccagacctgctcca 262 |||||||||||||||||||| Sbjct: 197925 cctcctccagacctgctcca 197944
>gb|AC115836.5| Homo sapiens chromosome 8, clone RP11-1069E10, complete sequence Length = 107374 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctcc 195 |||||||||||||||||||| Sbjct: 98242 ttttcctttcttgcttctcc 98261
>ref|XM_693660.1| PREDICTED: Danio rerio hypothetical protein LOC570211 (LOC570211), partial mRNA Length = 1269 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 207 atcttcctccccaacaatcttcttccag 234 |||||||||| | ||||||||||||||| Sbjct: 837 atcttcctcctccacaatcttcttccag 864
>gb|AC008919.9| Homo sapiens chromosome 5 clone CTD-2276O24, complete sequence Length = 106689 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ctccagtgggcagatctcag 475 |||||||||||||||||||| Sbjct: 51646 ctccagtgggcagatctcag 51627
>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence Length = 170272 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcttgcttctccttttcctt 203 |||||||||||||||||||| Sbjct: 23655 tcttgcttctccttttcctt 23636
>gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcag 475 |||||||||||||||||||| Sbjct: 180419 ctccagtgggcagatctcag 180438
>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete sequence Length = 178904 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 181 ctttcttgcttctccttttccttatcatcttcctcc 216 ||||||| |||||||||||||| || ||||||||| Sbjct: 71530 ctttcttccttctccttttcctcttcttcttcctcc 71565
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 gatggcgccgacagcgagct 622 |||||||||||||||||||| Sbjct: 126283 gatggcgccgacagcgagct 126264
>ref|NR_002685.1| Caenorhabditis elegans strain Bristol N2 chromosome X Length = 2199 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| ||| ||||||||| Sbjct: 317 cttctccttttcctcatcctcttcctcc 344
>ref|NM_068150.3| Caenorhabditis elegans F55F10.1 (F55F10.1) mRNA, complete cds Length = 13378 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| ||| ||||||||| Sbjct: 11835 cttctccttttcctcatcctcttcctcc 11808
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ttcttggtctctggcaggaa 299 |||||||||||||||||||| Sbjct: 12643218 ttcttggtctctggcaggaa 12643237
>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete sequence Length = 163057 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 cttctccttttccttatcatcttcctcc 216 |||||||||||||| |||||||||||| Sbjct: 70033 cttctccttttcctcctcatcttcctcc 70060
>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence Length = 192176 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 cttctccttttccttatcatcttcctcc 216 ||||||||| ||||| |||||||||||| Sbjct: 39950 cttctccttctccttctcatcttcctcc 39923
>gb|AC099405.3| Papio anubis clone RP41-161K2, complete sequence Length = 142943 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcttgcttctccttttcctt 203 |||||||||||||||||||| Sbjct: 77040 tcttgcttctccttttcctt 77059
>emb|BX470200.12| Zebrafish DNA sequence from clone DKEY-207M2 in linkage group 4, complete sequence Length = 172729 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 207 atcttcctccccaacaatcttcttccag 234 |||||||||| | ||||||||||||||| Sbjct: 86185 atcttcctcctccacaatcttcttccag 86212
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ttcttggtctctggcaggaa 299 |||||||||||||||||||| Sbjct: 10247 ttcttggtctctggcaggaa 10266
>emb|AJ344337.1|ATH344337 Arabidopsis thaliana mRNA for STP6 protein Length = 1524 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ggtccccatgaccatgcaaa 515 |||||||||||||||||||| Sbjct: 1199 ggtccccatgaccatgcaaa 1180
>emb|AL160236.4|CNS01RH0 Human chromosome 14 DNA sequence BAC R-193F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192401 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tttcttgcttctccttttcc 201 |||||||||||||||||||| Sbjct: 125072 tttcttgcttctccttttcc 125053
>gb|AC091326.8| Mus musculus chromosome 8, clone RP23-135P2, complete sequence Length = 180929 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gttttcctttcttgcttctccttt 198 ||||||||||||||||| |||||| Sbjct: 78079 gttttcctttcttgcttttccttt 78102
>gb|AC137938.12| Mus musculus chromosome 5, clone RP24-365C2, complete sequence Length = 151679 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gcaacagcagctgcaggcct 42 |||||||||||||||||||| Sbjct: 48735 gcaacagcagctgcaggcct 48716
>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete sequences Length = 150724 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 181 ctttcttgcttctccttttccttatcatcttcctcc 216 ||||||| |||||||||||||| || ||||||||| Sbjct: 119211 ctttcttccttctccttttcctcttcttcttcctcc 119176
>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete sequences Length = 172173 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 181 ctttcttgcttctccttttccttatcatcttcctcc 216 ||||||| |||||||||||||| || ||||||||| Sbjct: 982 ctttcttccttctccttttcctcttcttcttcctcc 947
>gb|AC167013.4| Mus musculus BAC clone RP23-262F9 from chromosome 14, complete sequence Length = 236791 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 ttttcctttcttgcttctccttttcctt 203 |||||||||||| |||||| |||||||| Sbjct: 141795 ttttcctttcttccttctctttttcctt 141822
>emb|Z22532.1|MMSYNDE1A M.musculus syndecan-1 Length = 33934 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctggcaacagcagctgcagg 39 |||||||||||||||||||| Sbjct: 28582 ctggcaacagcagctgcagg 28563
>emb|AL831770.3| Human DNA sequence from clone RP13-297M11 on chromosome 1, complete sequence Length = 151857 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 ctccagtgggcagatctcag 475 |||||||||||||||||||| Sbjct: 52711 ctccagtgggcagatctcag 52730
>emb|AL844178.7| Mouse DNA sequence from clone RP23-352K10 on chromosome 4, complete sequence Length = 186608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 accacaatgctctgccctgc 446 |||||||||||||||||||| Sbjct: 114351 accacaatgctctgccctgc 114332 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,059,998 Number of Sequences: 3902068 Number of extensions: 6059998 Number of successful extensions: 138468 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137940 Number of HSP's gapped (non-prelim): 521 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)