>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 348      cccattcttgaaacctgaatgt 369
                ||||||||||||||||||||||
Sbjct: 12653064 cccattcttgaaacctgaatgt 12653085

>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 348   cccattcttgaaacctgaatgt 369
             ||||||||||||||||||||||
Sbjct: 23925 cccattcttgaaacctgaatgt 23904

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 348      cccattcttgaaacctgaatgt 369
                ||||||||||||||||||||||
Sbjct: 12649827 cccattcttgaaacctgaatgt 12649848

>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 348  cccattcttgaaacctgaatgt 369
            ||||||||||||||||||||||
Sbjct: 7517 cccattcttgaaacctgaatgt 7538

>gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome 1, complete sequence
          Length = 173764

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    attctatcaagaacaaagagc 186
              |||||||||||||||||||||
Sbjct: 108224 attctatcaagaacaaagagc 108204

>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence
          Length = 177675

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 166    attctatcaagaacaaagagc 186
              |||||||||||||||||||||
Sbjct: 166304 attctatcaagaacaaagagc 166324

>emb|BX000531.11| Human DNA sequence from clone DAQB-12N14 on chromosome 6 Contains the
             OR2H1 gene for olfactory receptor, family 2, subfamily H,
             member 1, the UBDP1 pseudogene for ubiquitin D pseudogene
             1, the MAS1L gene for MAS1 oncogene-like, the RPS17P1
             pseudogene for ribosomal protein S17 pseudogene 1 and the
             DAQB-12N14.5 gene for a novel transcript, complete
             sequence
          Length = 89139

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 78001 gttcttctagcccattcttga 78021

>emb|BX247947.4| Human DNA sequence from clone DASS-372E1 on chromosome 6, complete
             sequence
          Length = 112061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 81785 gttcttctagcccattcttga 81805

>emb|AL662860.3| Human DNA sequence from clone XXbac-158F21 on chromosome 6 contains a
             MAS1 oncogene pseudogene, complete sequence
          Length = 49694

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 21887 gttcttctagcccattcttga 21907

>emb|AL662869.2| Human DNA sequence from clone XXbac-128A13 on chromosome 6 contains the
              OR12D2, OR11A1, OR10C1 and OR2H1 genes for olfactory
              receptor, family 12, subfamily D, member 2, family 11,
              subfamily A, member 1, family 10, subfamily C, member 1,
              family 2, subfamily H, member 1, the gene for MAS-related G
              protein-coupled receptor (MRG), the OR12D1P pseudogene for
              olfactory receptor, family 12, subfamily D, member 1, a
              diubiquitin pseudogene and a ribosomal protein S17 (RPS17)
              pseudogene, complete sequence
          Length = 133836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    gttcttctagcccattcttga 358
              |||||||||||||||||||||
Sbjct: 129143 gttcttctagcccattcttga 129163

>emb|CR388393.8| Human DNA sequence from clone DADB-136A24 on chromosome 6, complete
              sequence
          Length = 159366

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    gttcttctagcccattcttga 358
              |||||||||||||||||||||
Sbjct: 153942 gttcttctagcccattcttga 153962

>emb|CR759768.2| Human DNA sequence from clone DAMC-143I21 on chromosome 6, complete
              sequence
          Length = 123752

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    gttcttctagcccattcttga 358
              |||||||||||||||||||||
Sbjct: 108589 gttcttctagcccattcttga 108609

>emb|CR759956.2| Human DNA sequence from clone DAAP-341G9 on chromosome 6, complete
             sequence
          Length = 81080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 74991 gttcttctagcccattcttga 75011

>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete
             sequence
          Length = 83649

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 17171 gttcttctagcccattcttga 17191

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 44      ctccataatgccgcttgacaa 64
               |||||||||||||||||||||
Sbjct: 3195095 ctccataatgccgcttgacaa 3195075

>gb|AC004177.2|AC004177 Homo sapiens clone UWGC:y19c042 from 6p21, complete sequence
          Length = 38596

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 26693 gttcttctagcccattcttga 26673

>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2
             Contains a MAS1 oncogene pseudogene, the OR2H2 gene for
             olfactory receptor 2H2, olfactory receptor 2I1 and 2H5
             pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin,
             an RPL13A (60S Ribosomal Protein L13A) pseudogene, the
             GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor
             1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3,
             yeast) homolog) pseudogene and three CpG islands, complete
             sequence
          Length = 134292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gttcttctagcccattcttga 358
             |||||||||||||||||||||
Sbjct: 19590 gttcttctagcccattcttga 19610

>gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, complete sequence
          Length = 139126

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ttgagtgccttttctcggga 319
             ||||||||||||||||||||
Sbjct: 58943 ttgagtgccttttctcggga 58962

>gb|AC135016.3| Mus musculus BAC clone RP24-244B4 from chromosome 18, complete sequence
          Length = 177193

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    actggagagcaaaactgtag 40
             ||||||||||||||||||||
Sbjct: 25509 actggagagcaaaactgtag 25528

>ref|XM_542185.2| PREDICTED: Canis familiaris similar to small glutamine-rich
           tetratricopeptide (LOC485067), mRNA
          Length = 1091

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 gaaggtagaaaactttgaag 337
           ||||||||||||||||||||
Sbjct: 340 gaaggtagaaaactttgaag 359

>emb|AJ298054.1|MMA298054 Mus musculus Ly57 gene for lymphocyte antigen 57
          Length = 71456

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ttgagtgccttttctcggga 319
             ||||||||||||||||||||
Sbjct: 30645 ttgagtgccttttctcggga 30626

>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence
          Length = 202340

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     actggagagcaaaactgtag 40
              ||||||||||||||||||||
Sbjct: 117695 actggagagcaaaactgtag 117714

>gb|AC008134.3| Homo sapiens 3q26.2-27 BAC RPCI11-263C16 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 175132

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    taatgccgcttgacaatttc 68
             ||||||||||||||||||||
Sbjct: 85660 taatgccgcttgacaatttc 85641

>dbj|AK172016.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830029J19 product:B-cell linker, full
            insert sequence
          Length = 4149

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  ttgagtgccttttctcggga 319
            ||||||||||||||||||||
Sbjct: 1173 ttgagtgccttttctcggga 1154

>gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181835

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ttcttctagcccattcttga 358
              ||||||||||||||||||||
Sbjct: 156816 ttcttctagcccattcttga 156835

>emb|BX933555.2| Gallus gallus finished cDNA, clone ChEST48o6
          Length = 1239

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 249 gcggggcggaccggcggcagcgcc 272
           ||||||||||| ||||||||||||
Sbjct: 817 gcggggcggacaggcggcagcgcc 794

>emb|BX548030.10| Zebrafish DNA sequence from clone CH211-194H8 in linkage group 19,
             complete sequence
          Length = 140638

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    atatcttaaagatcttattt 109
             ||||||||||||||||||||
Sbjct: 80552 atatcttaaagatcttattt 80571

>gb|AC017007.9| Homo sapiens BAC clone RP11-119H12 from 4, complete sequence
          Length = 182805

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    atatttagaatcagctccaa 146
              ||||||||||||||||||||
Sbjct: 113042 atatttagaatcagctccaa 113023

>emb|BX571799.4| Zebrafish DNA sequence from clone DKEY-281A24, complete sequence
          Length = 159106

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    atatcttaaagatcttattt 109
             ||||||||||||||||||||
Sbjct: 45586 atatcttaaagatcttattt 45567

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 200     cggccggggcgaggtcgtgc 219
               ||||||||||||||||||||
Sbjct: 1213454 cggccggggcgaggtcgtgc 1213435

>emb|AL929114.8| Zebrafish DNA sequence from clone CH211-133L11 in linkage group 1,
              complete sequence
          Length = 180158

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    caaccggaggaggaggaaat 291
              ||||||||||||||||||||
Sbjct: 166469 caaccggaggaggaggaaat 166450

>emb|X17683.1|MMTHY1PR M.musculus Thy-1 mRNA for Thy-1 antigen (unmethylated island &
           promoter elements)
          Length = 1339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 gcgggtccctcccgccggcc 204
           ||||||||||||||||||||
Sbjct: 477 gcgggtccctcccgccggcc 458


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,000,903
Number of Sequences: 3902068
Number of extensions: 4000903
Number of successful extensions: 72285
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72110
Number of HSP's gapped (non-prelim): 175
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)