ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22o10 |
|---|---|
| Clone Library Name | barley_pub |
>HGD_ARATH (Q9ZRA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 461 Score = 85.5 bits (210), Expect = 3e-17 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFSHV 171 +L+GT+AFMFESALIPRVC WALESP D DYYQCWIGLKSHFS + Sbjct: 398 KLTGTMAFMFESALIPRVCHWALESPFLDHDYYQCWIGLKSHFSRI 443
>HGD_BORPE (Q7VUG2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 432 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 T+AFMFE+ + R AL SP R DYYQCW GL+ HF Sbjct: 389 TMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHF 427
>HGD_BORPA (Q7W189) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 432 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 T+AFMFE+ + R AL SP R DYYQCW GL+ HF Sbjct: 389 TMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHF 427
>HGD_BORBR (Q7WNZ3) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 432 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 T+AFMFE+ + R AL SP R DYYQCW GL+ HF Sbjct: 389 TMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHF 427
>HGD_BURS3 (Q39J54) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 444 Score = 48.1 bits (113), Expect = 5e-06 Identities = 18/44 (40%), Positives = 30/44 (68%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R R+AL++ DY++CW G+K HF+ Sbjct: 397 KVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQGIKKHFN 440
>HGD_MOUSE (O09173) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 445 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%) Frame = -3 Query: 299 GTLAFMFESALIPRVCRWALESPS-RDLDYYQCWIGLKSHFS 177 GT+AFMFES+L V +W L++ S D +YY+CW L+SHF+ Sbjct: 394 GTMAFMFESSLSLAVTKWGLKTCSCLDENYYKCWEPLRSHFT 435
>HGD_BURPS (Q63RD3) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 450 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/44 (40%), Positives = 30/44 (68%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R R+AL++ +Y++CW GLK HF+ Sbjct: 403 KVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFN 446
>HGD_BURP1 (Q3JPA3) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 450 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/44 (40%), Positives = 30/44 (68%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R R+AL++ +Y++CW GLK HF+ Sbjct: 403 KVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFN 446
>HGD_BURMA (Q62I34) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 450 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/44 (40%), Positives = 30/44 (68%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R R+AL++ +Y++CW GLK HF+ Sbjct: 403 KVGDTMAFMFETRTLIRPTRFALDTAQLQANYFECWQGLKKHFN 446
>HGD_HUMAN (Q93099) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 445 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 2/43 (4%) Frame = -3 Query: 299 GTLAFMFESALIPRVCRWALESPSRDLD--YYQCWIGLKSHFS 177 GT+AFMFES+L V +W L++ SR LD Y++CW LKSHF+ Sbjct: 394 GTMAFMFESSLSLAVTKWGLKA-SRCLDENYHKCWEPLKSHFT 435
>HGD_XANOR (Q5GVE9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 441 Score = 45.1 bits (105), Expect = 5e-05 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFSH 174 ++ T+AFMFE+ + R + AL + R DY QCW GL++ F H Sbjct: 387 IAETMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAFQH 430
>HGD_RALEJ (Q46UA4) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 439 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R +A S S DYY CW GLK HF+ Sbjct: 393 ITDTMAFMFETPGVIRPTPYAARSASLQQDYYTCWQGLKKHFN 435
>HGD_RALSO (Q8XRZ0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE+ + R R+A ES Y++CW GLK HF Sbjct: 401 KVEATMAFMFETRGVIRPTRFAAESAQLQARYFECWQGLKKHF 443
>HGD_XANCP (Q8PDA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 455 Score = 43.1 bits (100), Expect = 2e-04 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE+ + R AL +P R DY QCW GL+ F Sbjct: 408 ITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
>HGD_XANC8 (Q4UZI9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 455 Score = 43.1 bits (100), Expect = 2e-04 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE+ + R AL +P R DY QCW GL+ F Sbjct: 408 ITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
>HGD_XANC5 (Q3BYE8) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 439 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE+ + R + AL + R DY QCW GL++ F Sbjct: 389 IADTMAFMFETRAVLRPTQQALNAAHRQADYQQCWSGLRAAF 430
>HGD_XANAC (Q8PQ74) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 458 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE+ + R + AL + R DY QCW GL++ F Sbjct: 408 IADTMAFMFETRAVLRPTQQALSAAHRQADYQQCWSGLRAAF 449
>HGD_PSEAE (Q9X4G0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 432 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 R+ T+AFMFE++ + R R ALE+P+ DY CW L S F+ Sbjct: 385 RIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
>HGD_DROME (Q9VKJ0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 439 Score = 42.0 bits (97), Expect = 4e-04 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -3 Query: 299 GTLAFMFESALIPRVCRWALESPSR-DLDYYQCWIGLKSHF 180 GT AFMFES+L V +W E+ + D YY+CW LK++F Sbjct: 394 GTQAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434
>HGD_RHOPA (Q6N0T9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 +L+GT+AFMFE+ RV +A S DY CW GL+ F Sbjct: 401 KLTGTMAFMFETRYPQRVTEYAASSGLLQDDYADCWNGLEKRF 443
>HGD_CAEEL (Q9Y041) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 437 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = -3 Query: 299 GTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 GT++FMFES+L + WA+ + D DYY+ W LK HF+ Sbjct: 395 GTMSFMFESSLNMAITNWAVYQ-NVDKDYYKDWQPLKKHFT 434
>HGD_LEGPL (Q5WX50) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 416 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 +LAFMFE+ +V A PSR +DY CW G K FS Sbjct: 376 SLAFMFETKDYWQVTEQAYRHPSRQIDYLNCWQGFKIEFS 415
>HGD_LEGPH (Q9S4T0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 416 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 +LAFMFE+ +V A PSR +DY CW G K FS Sbjct: 376 SLAFMFETKDYWQVTEQAYRHPSRQMDYLNCWQGFKIEFS 415
>HGD_LEGPA (Q5X5S2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 416 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -3 Query: 296 TLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 +LAFMFE+ +V A PSR +DY CW G K FS Sbjct: 376 SLAFMFETKDYWQVTEQAYRHPSRQMDYLNCWQGFKIEFS 415
>HGD_PSEPK (Q88E47) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 433 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE++ + R ALE P DY CW L S F+ Sbjct: 386 KIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
>HGD_CAUCR (Q9A5B8) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 425 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIG 195 ++ GT+AFMFES + R ALES + DY CW G Sbjct: 381 KIDGTMAFMFESRWVFRPTHLALESAALQSDYDACWTG 418
>HGD_PSEF5 (Q4KI35) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 434 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE++ + R ++ALE P DY CW L F+ Sbjct: 387 KIDNTMAFMFETSQVLRPSQFALECPELQNDYDACWASLPVTFN 430
>HGD_BRAJA (Q89XH1) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 +L+GT+AFMFE+ RV A + + DY CW GL+ F Sbjct: 401 KLTGTMAFMFETRYPQRVTAHAANASTLQDDYADCWKGLEKRF 443
>HGD_RHILO (Q983J4) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 457 Score = 37.4 bits (85), Expect = 0.010 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 +L T+AFMFE+ + R+ E +R +Y CW LK F+ Sbjct: 406 KLDNTMAFMFETRFPQMLTRYGAELETRQDNYIDCWADLKKRFN 449
>HGD_PSEPF (Q3KHV3) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 431 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 ++ T+AFMFE++ + R R+AL+ P Y CW L + F Sbjct: 384 KIDNTMAFMFETSQVLRPSRFALDCPQLQSTYDACWATLPATF 426
>HGD_PSESM (Q87Z79) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 434 Score = 35.8 bits (81), Expect = 0.028 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R AL P DY CW G+ F+ Sbjct: 387 KIENTMAFMFETGKVLRPSLHALACPQLQADYDACWNGMARTFN 430
>HGD_RHIME (Q9X4F5) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 453 Score = 35.8 bits (81), Expect = 0.028 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHF 180 +L T+AFMFE+ ++ +A E + DY CW GL+ F Sbjct: 404 KLDNTMAFMFETRFPQQLTTFAAELDTLQDDYMDCWSGLERKF 446
>HGD_PSE14 (Q48GS7) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 435 Score = 35.4 bits (80), Expect = 0.037 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -3 Query: 308 RLSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFS 177 ++ T+AFMFE+ + R R AL P DY CW + F+ Sbjct: 387 KIENTMAFMFETGKVLRPSRHALGCPQLQADYDACWNDMTRTFN 430
>HGD_EMENI (Q00667) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 33.9 bits (76), Expect = 0.11 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = -3 Query: 299 GTLAFMFESALIPRVCRWALESPSRDLDYY--QCWIGLKSHF 180 G++AFMFES+L+ V W L++ + + Y W LK HF Sbjct: 400 GSMAFMFESSLMVGVSEWGLKTCQKVQEEYNEHSWQPLKRHF 441
>TEF_CHICK (Q92172) Transcription factor VBP (Vitellogenin gene-binding| protein) (Thyrotroph embryonic factor homolog) Length = 319 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 180 EVGFEPDPA-LVVVQIPGRRLQSPAAHARDQRRLK 281 EV F PDPA LV+ +PG L +P H + LK Sbjct: 190 EVNFNPDPADLVLSSVPGGELFNPRKHKFTEEDLK 224
>HAM1_METCA (Q602P0) HAM1 protein homolog| Length = 201 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +3 Query: 186 GFEPDPALVVVQIPGRRLQSPAAHARDQRRLKHEGQSAA 302 GF DP +V PG L + D+ RL H GQ+AA Sbjct: 154 GFGYDPVFLV---PGTGLSAAELPPEDKNRLSHRGQAAA 189
>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1173 Score = 28.5 bits (62), Expect = 4.5 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -1 Query: 295 LWPSCLSRR*SRACAAGLWSRRPGIWTTTSAGSGSNPTSHMSKMTVMDRRQPGTMXRMAR 116 L PS + RR + GL SR+ + +G G S +M M R Q G+M R Sbjct: 907 LTPSAVVRRTTNGLTNGLSSRQERPKSAVFSGEGKVKMSVEEQMDRMRRHQSGSMKEKRR 966 Query: 115 S 113 S Sbjct: 967 S 967
>FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated protein C| cofactor) [Contains: Coagulation factor V heavy chain; Coagulation factor V light chain] Length = 2211 Score = 28.5 bits (62), Expect = 4.5 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Frame = +2 Query: 65 MALGIPLHFLPGGNRATSRH---PXHRPRLSPVHHRHL*HVRSGI*ARSSTGSS---PDP 226 +A +P H N TS+ P P +SP H + ++ S+T S PDP Sbjct: 1081 LAASLPDHDQTSPNDTTSQTSSPPDLYPTVSPEEHYQIFPIQDSDPTHSTTAPSNRSPDP 1140 Query: 227 GTATPEPSGTRAGSAPTQ 280 +T PS + P+Q Sbjct: 1141 THSTTAPSNRSPPTQPSQ 1158
>HLF_MOUSE (Q8BW74) Hepatic leukemia factor| Length = 295 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 183 VGFEPDPA-LVVVQIPGRRLQSPAAHARDQRRLK 281 VG+EPDPA L + IPG+ + P + LK Sbjct: 173 VGYEPDPADLALSSIPGQEMFDPRKRKFSEEELK 206
>HLF_HUMAN (Q16534) Hepatic leukemia factor| Length = 295 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 183 VGFEPDPA-LVVVQIPGRRLQSPAAHARDQRRLK 281 VG+EPDPA L + IPG+ + P + LK Sbjct: 173 VGYEPDPADLALSSIPGQEMFDPRKRKFSEEELK 206
>MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)| Length = 1098 Score = 28.1 bits (61), Expect = 5.9 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Frame = +2 Query: 86 HFLPGGNRATSRHPXHRPRLSPV--HHRHL*HV----RSGI*ARSSTGSSPDPGTATPEP 247 H P G +TS RPR P H+ +V +G+ + S G P PG P+P Sbjct: 978 HRPPRGPPSTSLGASRRPRARPPSEHNTEFLNVPDQGMAGMQRKRSVGQRPVPGVGRPKP 1037 Query: 248 SGTRAGSAPTQT*RPECRS 304 G P CR+ Sbjct: 1038 QPRTHG--------PRCRA 1048
>ATG9_YARLI (Q6C2F5) Autophagy-related protein 9| Length = 788 Score = 28.1 bits (61), Expect = 5.9 Identities = 18/40 (45%), Positives = 21/40 (52%) Frame = +2 Query: 155 HHRHL*HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSAP 274 H+ H H SG+ R G SP TAT SGT G+AP Sbjct: 699 HNGH--HALSGLTQRD-VGLSPAAPTATTATSGTATGAAP 735
>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68) Length = 443 Score = 28.1 bits (61), Expect = 5.9 Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Frame = +2 Query: 95 PGGNRATSRHPXHRPRLSPVHHRHL*H---VRSGI*ARSSTGSSPDP--GTATPEPSGTR 259 P G + R RP SP+ HR R G AR+S + P P +TP P T Sbjct: 23 PSGAHPSVRLTPSRP--SPLPHRPRGGGGGPRGG--ARASPATQPPPLLPPSTPGPDATV 78 Query: 260 AGSAPTQT*RPECRSA 307 GSAPT P +A Sbjct: 79 VGSAPTPLLPPSATAA 94
>AMPA_RHOBA (Q7UJ62) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 507 Score = 28.1 bits (61), Expect = 5.9 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Frame = -1 Query: 289 PSCLSRR*SRACAAGLWSRRPGIWTTTSAGSGSNPTSHMSKMTVMDRRQPGTMXRM---- 122 P L+ AC++G + +PG T+ + G+ P ++ + D+R G+ + Sbjct: 60 PESLAATVKNACSSGEVTGKPGELTSFATGNAQTPWIVLAGLGASDKRTRGSAIELGAAV 119 Query: 121 ARSSSVSPR 95 RS + PR Sbjct: 120 VRSLASKPR 128
>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)| (Ataxin-2-related protein) Length = 1075 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +2 Query: 155 HHRHL*HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSAP 274 HH H A + TGS P A P P +AG AP Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAP 902
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 27.7 bits (60), Expect = 7.7 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +2 Query: 95 PGGNRATSRHPXH-RPRLSPVHHRHL*HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSA 271 P G ++T R P HHR RS +R + SP P + + TRAGS Sbjct: 188 PVGRQSTMRSARSPSPSARGTHHRS----RSLSPSRKARAKSPSPQIISTQTKETRAGS- 242 Query: 272 PTQT*RPECRSAS 310 P P RSA+ Sbjct: 243 PIPNSNPLARSAT 255
>CRDL1_CHICK (Q90ZD5) Chordin-like protein 1 precursor (Neuralin) (Ventroptin)| Length = 456 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 116 SRHPXHRPR--LSPVHHRHL*HVRSGI*ARSSTGSSPDPGTAT 238 +RH HRP LSP R + +V ARS+ G PDP A+ Sbjct: 204 ARHSYHRPHYELSPSSTRQVVNVPRFPSARSNRGVLPDPQQAS 246
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 27.3 bits (59), Expect = 10.0 Identities = 21/75 (28%), Positives = 29/75 (38%) Frame = +2 Query: 68 ALGIPLHFLPGGNRATSRHPXHRPRLSPVHHRHL*HVRSGI*ARSSTGSSPDPGTATPEP 247 ALG+ + P R+ S+ H P LSP H + RS P PG+ E Sbjct: 224 ALGMDMTTAP---RSKSQQQLHSPALSPAHSPAKQPLGKPDQERSRGPGGPQPGSRQAET 280 Query: 248 SGTRAGSAPTQT*RP 292 + + P Q P Sbjct: 281 ARATSVPGPAQAAAP 295
>OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first short| protein] Length = 487 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/64 (23%), Positives = 29/64 (45%) Frame = +2 Query: 80 PLHFLPGGNRATSRHPXHRPRLSPVHHRHL*HVRSGI*ARSSTGSSPDPGTATPEPSGTR 259 P+H + + + H+P H+H V +SS+ + P P T++ PS + Sbjct: 418 PVHHISQSHHQSQSQ--HKPSRQQKQHQHHSQVAPTSHHQSSSSTPPTPSTSSSPPSSSS 475 Query: 260 AGSA 271 + S+ Sbjct: 476 SSSS 479
>UL49_EBV (P14347) Protein BFRF2| Length = 591 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -1 Query: 244 LWSRRPGIWTTTSAGSGSNPTSHMSKMTVMDRRQPGTMXRMARSSS 107 +W R P ++ GS SH S + + +PG + R ARS + Sbjct: 64 VWGRPPASEAAVASTPGSLFRSHSSAYWLSEVERPGGLVRWARSQT 109
>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.2) (Protein kinase minibrain homolog) (MNBH) (RP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 27.3 bits (59), Expect = 10.0 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = +2 Query: 98 GGNRATSRHPXHRPRLSPVH-HRHL*-HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSA 271 GG+ TS R R P H HRH H + + A SP P P G A Sbjct: 516 GGSSGTSN--SGRARSDPTHQHRHSGGHFAAAVQAMDCETHSPQVRQQFPAPLGWSGTEA 573 Query: 272 PTQ 280 PTQ Sbjct: 574 PTQ 576
>DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.1) (Protein kinase minibrain homolog) (MNBH) (MP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 27.3 bits (59), Expect = 10.0 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = +2 Query: 98 GGNRATSRHPXHRPRLSPVH-HRHL*-HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSA 271 GG+ TS R R P H HRH H + + A SP P P G A Sbjct: 516 GGSSGTSN--SGRARSDPTHQHRHSGGHFAAAVQAMDCETHSPQVRQQFPAPLGWSGTEA 573 Query: 272 PTQ 280 PTQ Sbjct: 574 PTQ 576
>DYR1A_HUMAN (Q13627) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.1) (Protein kinase minibrain homolog) (MNBH) (HP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 27.3 bits (59), Expect = 10.0 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = +2 Query: 98 GGNRATSRHPXHRPRLSPVH-HRHL*-HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSA 271 GG+ TS R R P H HRH H + + A SP P P G A Sbjct: 516 GGSSGTSN--SGRARSDPTHQHRHSGGHFTAAVQAMDCETHSPQVRQQFPAPLGWSGTEA 573 Query: 272 PTQ 280 PTQ Sbjct: 574 PTQ 576
>DMAP1_HUMAN (Q9NPF5) DNA methyltransferase 1-associated protein 1| (DNMT1-associated protein 1) (DNMAP1) Length = 467 Score = 27.3 bits (59), Expect = 10.0 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 143 LSPVHHRHL*HVRSGI*ARSSTGSSPDPGTATPEPSGTRAGSAP 274 L + HRH R+G+ +T +S PG A+ EP+ T G P Sbjct: 388 LQMLRHRHEALARAGVLGGPATPAS-GPGPASAEPAVTEPGLGP 430
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 27.3 bits (59), Expect = 10.0 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 9/68 (13%) Frame = +2 Query: 74 GIPLHFLPGGNRATSRHPXHRPRL-SPVHHRHL*HVR--------SGI*ARSSTGSSPDP 226 G+P + LPG +R +HP P L SP + H R SG+ + S G +P Sbjct: 733 GLPGNQLPG-SRQQFQHPPSFPGLQSPTLAADMRHSRMMRERGRSSGVQIQGSQGRTPQF 791 Query: 227 GTATPEPS 250 T P+PS Sbjct: 792 RTPMPQPS 799
>NRTA_SYNP7 (P38043) Nitrate transport protein nrtA| Length = 443 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +2 Query: 194 ARSSTGSSPDP--GTATPEPSGTRAGSAP 274 A S SS D T+TP PSGT G AP Sbjct: 25 ACGSNNSSTDTTGSTSTPAPSGTSGGDAP 53
>HNM1_YEAST (P19807) Choline transport protein| Length = 563 Score = 27.3 bits (59), Expect = 10.0 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -3 Query: 305 LSGTLAFMFESALIPRVCRWALESPSRDLDYYQCWIGLKSHFSHV 171 ++G +AF+ S +IP +C L + R++ + W+G FS++ Sbjct: 425 ITGCIAFLLLSYIIPVIC---LLAKKRNIAHGPFWLGKFGFFSNI 466
>HLF_RAT (Q64709) Hepatic leukemia factor| Length = 295 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +3 Query: 183 VGFEPDPA-LVVVQIPGRRLQSPAAHARDQRRLK 281 VG+EPDPA L + IPG + P + LK Sbjct: 173 VGYEPDPADLALSSIPGPEMFDPRKRKFSEEELK 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,102,920 Number of Sequences: 219361 Number of extensions: 928561 Number of successful extensions: 3049 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 2802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3038 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
