ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY530101.1| Oryza sativa (indica cultivar-group) syn-copalyl ... 101 3e-18
2dbj|AB066270.1| Oryza sativa (japonica cultivar-group) OsCyc1 mR... 86 2e-13
3dbj|AK121319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
4dbj|AK100631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
6gb|AY602991.1| Oryza sativa (indica cultivar-group) ent-copalyl ... 64 7e-07
7ref|XM_466350.1| Oryza sativa (japonica cultivar-group), mRNA 64 7e-07
8dbj|AB066271.1| Oryza sativa (japonica cultivar-group) OsCyc2 mR... 64 7e-07
9dbj|AK072928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
11dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
12emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on ch... 44 0.62
13gb|AC132408.2| Mus musculus BAC clone RP23-346A12 from chromosom... 42 2.5
14gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 42 2.5
15emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chr... 42 2.5
16ref|NM_007368.2| Homo sapiens RAS p21 protein activator 3 (RASA3... 40 9.7
17gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 40 9.7
18gb|BC038456.1| Homo sapiens RAS p21 protein activator 3, mRNA (c... 40 9.7
19gb|BC047242.1| Homo sapiens RAS p21 protein activator 3, mRNA (c... 40 9.7
20gb|AC121776.3| Mus musculus BAC clone RP23-356I6 from chromosome... 40 9.7
21gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, co... 40 9.7
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.7
23ref|NM_207617.1| Rattus norvegicus IQ motif and Sec7 domain 3 (I... 40 9.7
24gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, com... 40 9.7
25ref|XM_756261.1| Ustilago maydis 521 hypothetical protein (UM052... 40 9.7
26ref|XM_757575.1| Ustilago maydis 521 hypothetical protein (UM065... 40 9.7
27gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosom... 40 9.7
28gb|AC121600.2| Mus musculus BAC clone RP23-302K1 from 17, comple... 40 9.7
29emb|AL589825.8| Human DNA sequence from clone RP11-12K1 on chrom... 40 9.7
30gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 9.7
31emb|AL161774.49| Human DNA sequence from clone RP11-245B11 on ch... 40 9.7
32gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.7
33emb|X89399.1|HSINSP4BP Homo sapiens mRNA for Ins(1,3,4,5)P4-bind... 40 9.7
34gb|AC103688.4| Homo sapiens chromosome 8, clone CTD-3046C4, comp... 40 9.7
35gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cance... 40 9.7
36dbj|AK128094.1| Homo sapiens cDNA FLJ46215 fis, clone TESTI40126... 40 9.7
37dbj|AK147351.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 9.7
38gb|AC105901.2| Homo sapiens chromosome 3 clone RP11-437B5, compl... 40 9.7
39dbj|AK161923.1| Mus musculus adult male olfactory brain cDNA, RI... 40 9.7
40dbj|AK169437.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 9.7
41gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Canc... 40 9.7
42dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
44dbj|AB057643.1| Rattus norvegicus sag mRNA for synArfGEF, comple... 40 9.7
45gb|AC068609.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 9.7
46ref|XM_573819.1| PREDICTED: Rattus norvegicus similar to Transfo... 40 9.7
47dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
48dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
49dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
50dbj|AK070495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
51ref|NM_001033354.1| Mus musculus IQ motif and Sec7 domain 3 (Iqs... 40 9.7
52dbj|AK122446.1| Mus musculus mRNA for mKIAA1110 protein 40 9.7
53gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.7 
>gb|AY530101.1| Oryza sativa (indica cultivar-group) syn-copalyl diphosphate synthase
            mRNA, complete cds
          Length = 2691

 Score =  101 bits (51), Expect = 3e-18
 Identities = 92/105 (87%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                        
Query: 559  gctctcctttgcagtccatgccatgagccactgcttccacgcttcacgaagaccgccgg- 617
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | 
Sbjct: 2052 gctctcctttgcagtccatgccatgagccactgcttccaagcttcacgaagactgccaga 1993

                                                         
Query: 618  --aaacatcgtcaaacgaaacaaggtcgataaggtcttcaagatt 660
              || | |||||||| | |||||||  |||||| |||||||||||
Sbjct: 1992 ataagcgtcgtcaaatggaacaaggctgataagctcttcaagatt 1948



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 420  ggcagatggaagaggtgagctgctcgagctgtgaataatcccaaaggt 467
            |||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 2194 ggcagatggaggaggtgagctgctcgagctgggaatactcccaaaggt 2147



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 169  ttcctaaatcacatcctgaaatatgacttttgcgatgtggctatcaactgtttcaggtga 228
            ||||||||||||||| || |||||||| ||  |||||||| |||||| ||| ||||||||
Sbjct: 2448 ttcctaaatcacatcttggaatatgaccttgtcgatgtggttatcaattgtctcaggtga 2389

               
Query: 229  gca 231
            |||
Sbjct: 2388 gca 2386
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>dbj|AB066270.1| Oryza sativa (japonica cultivar-group) OsCyc1 mRNA for syn-CDP
            synthase, complete cds
          Length = 2624

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                        
Query: 559  gctctcctttgcagtccatgccatgagccactgcttccacgcttcacgaagaccgccgg- 617
            |||||||||||||||||||||||| | |||||||||||| ||||||||||||| ||| | 
Sbjct: 2021 gctctcctttgcagtccatgccatcaaccactgcttccaagcttcacgaagactgccaga 1962

                                                         
Query: 618  --aaacatcgtcaaacgaaacaaggtcgataaggtcttcaagatt 660
              || | |||||||| | |||||||  |||||| |||||||||||
Sbjct: 1961 ataagcgtcgtcaaaaggaacaaggctgataagctcttcaagatt 1917



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  ttcctaaatcacatcctgaaatatgacttttgcgatgtggctatcaactgtttcaggtga 228
            ||||||||||||||| || |||||||| ||  ||||||||||||||| ||| ||||||||
Sbjct: 2417 ttcctaaatcacatcttggaatatgaccttgtcgatgtggctatcaattgtctcaggtga 2358

               
Query: 229  gca 231
            |||
Sbjct: 2357 gca 2355



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 421  gcagatggaagaggtgagctgctcgagctgtgaataatcccaaaggt 467
            ||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 2162 gcagatggaggaggtgagctgctcgagctgggaatactcccaaaggt 2116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 332  tgcatctccaaatccacttgc 352
            |||||||||||||||||||||
Sbjct: 2254 tgcatctccaaatccacttgc 2234
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>dbj|AK121319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113P09, full
            insert sequence
          Length = 2002

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                        
Query: 559  gctctcctttgcagtccatgccatgagccactgcttccacgcttcacgaagaccgccgg- 617
            |||||||||||||||||||||||| | |||||||||||| ||||||||||||| ||| | 
Sbjct: 1226 gctctcctttgcagtccatgccatcaaccactgcttccaagcttcacgaagactgccaga 1167

                                                         
Query: 618  --aaacatcgtcaaacgaaacaaggtcgataaggtcttcaagatt 660
              || | |||||||| | |||||||  |||||| |||||||||||
Sbjct: 1166 ataagcgtcgtcaaaaggaacaaggctgataagctcttcaagatt 1122



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  ttcctaaatcacatcctgaaatatgacttttgcgatgtggctatcaactgtttcaggtga 228
            ||||||||||||||| || |||||||| ||  ||||||||||||||| ||| ||||||||
Sbjct: 1622 ttcctaaatcacatcttggaatatgaccttgtcgatgtggctatcaattgtctcaggtga 1563

               
Query: 229  gca 231
            |||
Sbjct: 1562 gca 1560



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 421  gcagatggaagaggtgagctgctcgagctgtgaataatcccaaaggt 467
            ||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 1367 gcagatggaggaggtgagctgctcgagctgggaatactcccaaaggt 1321



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 332  tgcatctccaaatccacttgc 352
            |||||||||||||||||||||
Sbjct: 1459 tgcatctccaaatccacttgc 1439
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>dbj|AK100631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109E08, full
            insert sequence
          Length = 2769

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                        
Query: 559  gctctcctttgcagtccatgccatgagccactgcttccacgcttcacgaagaccgccgg- 617
            |||||||||||||||||||||||| | |||||||||||| ||||||||||||| ||| | 
Sbjct: 2221 gctctcctttgcagtccatgccatcaaccactgcttccaagcttcacgaagactgccaga 2162

                                                         
Query: 618  --aaacatcgtcaaacgaaacaaggtcgataaggtcttcaagatt 660
              || | |||||||| | |||||||  |||||| |||||||||||
Sbjct: 2161 ataagcgtcgtcaaaaggaacaaggctgataagctcttcaagatt 2117



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  ttcctaaatcacatcctgaaatatgacttttgcgatgtggctatcaactgtttcaggtga 228
            ||||||||||||||| || |||||||| ||  ||||||||||||||| ||| ||||||||
Sbjct: 2617 ttcctaaatcacatcttggaatatgaccttgtcgatgtggctatcaattgtctcaggtga 2558

               
Query: 229  gca 231
            |||
Sbjct: 2557 gca 2555



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 421  gcagatggaagaggtgagctgctcgagctgtgaataatcccaaaggt 467
            ||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 2362 gcagatggaggaggtgagctgctcgagctgggaatactcccaaaggt 2316



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 332  tgcatctccaaatccacttgc 352
            |||||||||||||||||||||
Sbjct: 2454 tgcatctccaaatccacttgc 2434
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                           
Query: 169     ttcctaaatcacatcctgaaatatgacttttgcgatgtggctatcaactgtttcaggtga 228
               ||||||||||||||| || |||||||| ||  ||||||||||||||| ||| ||||||||
Sbjct: 5290823 ttcctaaatcacatcttggaatatgaccttgtcgatgtggctatcaattgtctcaggtga 5290764

                  
Query: 229     gca 231
               |||
Sbjct: 5290763 gca 5290761



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                              
Query: 421     gcagatggaagaggtgagctgctcgagctgtgaataatcccaaaggt 467
               ||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 5290178 gcagatggaggaggtgagctgctcgagctgggaatactcccaaaggt 5290132



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 559     gctctcctttgcagtccatgccatgagccactgcttccac 598
               |||||||||||||||||||||||| | |||||||||||||
Sbjct: 5290037 gctctcctttgcagtccatgccatcaaccactgcttccac 5289998



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 332     tgcatctccaaatccacttgc 352
               |||||||||||||||||||||
Sbjct: 5290660 tgcatctccaaatccacttgc 5290640
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>gb|AY602991.1| Oryza sativa (indica cultivar-group) ent-copalyl diphosphate synthase
            (CPSent2) mRNA, complete cds
          Length = 2784

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 85/102 (83%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                        
Query: 505  gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
            ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 2268 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 2209

                                                      
Query: 565  ctttgcagtccatgccatgagccactgcttccacgcttcacg 606
             ||||   |||||| |||||||||||||||||||||||||||
Sbjct: 2208 gtttg---tccatgacatgagccactgcttccacgcttcacg 2170
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>ref|XM_466350.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2403

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 85/102 (83%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                        
Query: 505  gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
            ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 2064 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 2005

                                                      
Query: 565  ctttgcagtccatgccatgagccactgcttccacgcttcacg 606
             ||||   |||||| |||||||||||||||||||||||||||
Sbjct: 2004 gtttg---tccatgacatgagccactgcttccacgcttcacg 1966
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>dbj|AB066271.1| Oryza sativa (japonica cultivar-group) OsCyc2 mRNA for ent-CDP
            synthase, complete cds
          Length = 2732

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 85/102 (83%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                        
Query: 505  gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
            ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 2240 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 2181

                                                      
Query: 565  ctttgcagtccatgccatgagccactgcttccacgcttcacg 606
             ||||   |||||| |||||||||||||||||||||||||||
Sbjct: 2180 gtttg---tccatgacatgagccactgcttccacgcttcacg 2142
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>dbj|AK072928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144G04, full
           insert sequence
          Length = 1173

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 85/102 (83%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                       
Query: 505 gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
           ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 714 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 655

                                                     
Query: 565 ctttgcagtccatgccatgagccactgcttccacgcttcacg 606
            ||||   |||||| |||||||||||||||||||||||||||
Sbjct: 654 gtttg---tccatgacatgagccactgcttccacgcttcacg 616
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 77/94 (81%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                            
Query: 505      gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
                ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 21866369 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 21866310

                                                  
Query: 565      ctttgcagtccatgccatgagccactgcttccac 598
                 ||||   |||||| |||||||||||||||||||
Sbjct: 21866309 gtttg---tccatgacatgagccactgcttccac 21866279
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>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689H05
          Length = 135803

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 77/94 (81%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                         
Query: 505   gatctcgatggtccgaacgaacaacagtgctgtatctccatcaatggatccatggctctc 564
             ||||||||| || ||||| | || || ||| ||||| ||| || | ||||| ||||||||
Sbjct: 49654 gatctcgattgtgcgaactagcagcaatgcggtatccccaccagttgatccttggctctc 49595

                                               
Query: 565   ctttgcagtccatgccatgagccactgcttccac 598
              ||||   |||||| |||||||||||||||||||
Sbjct: 49594 gtttg---tccatgacatgagccactgcttccac 49564
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>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the
              3' end of the ATP11A gene for ATPase Class VI type 11A, the
              5' end of the MCF2L gene for a MCF.2 cell line derived
              transforming sequence-like gene, a novel gene and eight CpG
              islands, complete sequence
          Length = 170928

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 458    tcccaaaggttcagtttcttctcagc 483
              ||||||||||||||||||||| ||||
Sbjct: 110061 tcccaaaggttcagtttcttcccagc 110036
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>gb|AC132408.2| Mus musculus BAC clone RP23-346A12 from chromosome 18, complete sequence
          Length = 191613

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    tctctggtttctctgttgatt 295
              |||||||||||||||||||||
Sbjct: 140764 tctctggtttctctgttgatt 140784
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 69   agcacaaaacgttctttttct 89
            |||||||||||||||||||||
Sbjct: 5286 agcacaaaacgttctttttct 5306
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>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a
             PDZ domain containing guanine (Pdzgef1) pseudogene, a
             tubulin alpha 4 (Tuba4) pseudogene , an olfactory receptor
             pseudogene, a novel pseudogene and the 3' end of a novel
             gene, complete sequence
          Length = 108424

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 78    cgttctttttctttggattgcttac 102
             |||||||||||||| ||||||||||
Sbjct: 56821 cgttctttttcttttgattgcttac 56797
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>ref|NM_007368.2| Homo sapiens RAS p21 protein activator 3 (RASA3), mRNA
          Length = 4220

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 tgtggcgagcttgtggcaga 425
           ||||||||||||||||||||
Sbjct: 578 tgtggcgagcttgtggcaga 559
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>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227955

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    tctctctggtttctctgttg 292
              ||||||||||||||||||||
Sbjct: 154187 tctctctggtttctctgttg 154206
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>gb|BC038456.1| Homo sapiens RAS p21 protein activator 3, mRNA (cDNA clone
           MGC:46517 IMAGE:5240667), complete cds
          Length = 4220

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 tgtggcgagcttgtggcaga 425
           ||||||||||||||||||||
Sbjct: 578 tgtggcgagcttgtggcaga 559
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>gb|BC047242.1| Homo sapiens RAS p21 protein activator 3, mRNA (cDNA clone
           MGC:47588 IMAGE:6042834), complete cds
          Length = 4235

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 tgtggcgagcttgtggcaga 425
           ||||||||||||||||||||
Sbjct: 569 tgtggcgagcttgtggcaga 550
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>gb|AC121776.3| Mus musculus BAC clone RP23-356I6 from chromosome 3, complete sequence
          Length = 187473

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tttttctttggattgcttac 102
              ||||||||||||||||||||
Sbjct: 135485 tttttctttggattgcttac 135466
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>gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, complete sequence
          Length = 225763

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tgtctctctggtttctctgt 290
              ||||||||||||||||||||
Sbjct: 112091 tgtctctctggtttctctgt 112072
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      gttcttactagtagtactaa 149
                ||||||||||||||||||||
Sbjct: 10961760 gttcttactagtagtactaa 10961779
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>ref|NM_207617.1| Rattus norvegicus IQ motif and Sec7 domain 3 (Iqsec3), mRNA
          Length = 7410

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 4468 tcctctgtgttcaccatgctcccc 4491
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>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence
          Length = 227078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   tcctctgtgttctccatgctcccc 385
             |||||||||||| |||||||||||
Sbjct: 28277 tcctctgtgttcaccatgctcccc 28254
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>ref|XM_756261.1| Ustilago maydis 521 hypothetical protein (UM05207.1) partial mRNA
          Length = 753

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 gctgcaacgttccttccaga 501
           ||||||||||||||||||||
Sbjct: 418 gctgcaacgttccttccaga 399
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>ref|XM_757575.1| Ustilago maydis 521 hypothetical protein (UM06521.1) partial mRNA
          Length = 753

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 gctgcaacgttccttccaga 501
           ||||||||||||||||||||
Sbjct: 418 gctgcaacgttccttccaga 399
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>gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosome 1, complete sequence
          Length = 171608

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    tgtctctctggtttctctgt 290
              ||||||||||||||||||||
Sbjct: 145718 tgtctctctggtttctctgt 145737
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>gb|AC121600.2| Mus musculus BAC clone RP23-302K1 from 17, complete sequence
          Length = 199296

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   agggttcttcctaaatcacatcct 185
             |||||||||| |||||||||||||
Sbjct: 60279 agggttcttcttaaatcacatcct 60256
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>emb|AL589825.8| Human DNA sequence from clone RP11-12K1 on chromosome 9, complete
             sequence
          Length = 57578

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   gttcttcctaaatcacatcc 184
             ||||||||||||||||||||
Sbjct: 28806 gttcttcctaaatcacatcc 28825
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 495     ttccagagacgatctcgatg 514
               ||||||||||||||||||||
Sbjct: 1797476 ttccagagacgatctcgatg 1797457
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>emb|AL161774.49| Human DNA sequence from clone RP11-245B11 on chromosome 13 Contains the
             5' end of the gene for RAS p21 protein activator (GTPase
             activating protein) 3 (Ins(1,3,4,5)P4-binding protein)
             (GAP1IP4BP), a novel gene and 20 CpG islands, complete
             sequence
          Length = 162296

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   tgtggcgagcttgtggcaga 425
             ||||||||||||||||||||
Sbjct: 42881 tgtggcgagcttgtggcaga 42900
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   gttcttactagtagtactaa 149
             ||||||||||||||||||||
Sbjct: 19269 gttcttactagtagtactaa 19250
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>emb|X89399.1|HSINSP4BP Homo sapiens mRNA for Ins(1,3,4,5)P4-binding protein
          Length = 2837

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 tgtggcgagcttgtggcaga 425
           ||||||||||||||||||||
Sbjct: 493 tgtggcgagcttgtggcaga 474
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>gb|AC103688.4| Homo sapiens chromosome 8, clone CTD-3046C4, complete sequence
          Length = 211222

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tttttctttggattgcttac 102
             ||||||||||||||||||||
Sbjct: 16154 tttttctttggattgcttac 16135
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>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163461

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 362    tcctctgtgttctccatgctcccc 385
              |||||||||||| |||||||||||
Sbjct: 136917 tcctctgtgttcaccatgctcccc 136894
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>dbj|AK128094.1| Homo sapiens cDNA FLJ46215 fis, clone TESTI4012646, highly  similar
            to Ras GTPase-activating protein 3
          Length = 4637

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 406  tgtggcgagcttgtggcaga 425
            ||||||||||||||||||||
Sbjct: 1016 tgtggcgagcttgtggcaga 997
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>dbj|AK147351.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1018J21 product:similar to capicua (Drosophila)
            homolog [Homo sapiens], full insert sequence
          Length = 7468

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 4576 tcctctgtgttcaccatgctcccc 4599
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>gb|AC105901.2| Homo sapiens chromosome 3 clone RP11-437B5, complete sequence
          Length = 186224

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 559    gctctcctttgcagtccatg 578
              ||||||||||||||||||||
Sbjct: 108014 gctctcctttgcagtccatg 107995
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>dbj|AK161923.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430408C08
           product:unclassifiable, full insert sequence
          Length = 2975

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 362 tcctctgtgttctccatgctcccc 385
           |||||||||||| |||||||||||
Sbjct: 83  tcctctgtgttcaccatgctcccc 106
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>dbj|AK169437.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M421501D06 product:similar to capicua (Drosophila)
            homolog [Homo sapiens], full insert sequence
          Length = 6840

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 3951 tcctctgtgttcaccatgctcccc 3974
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>gb|AC153921.5| Mus musculus 10 BAC RP23-89C21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212543

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     caaaaaagacttacacatgt 53
              ||||||||||||||||||||
Sbjct: 132784 caaaaaagacttacacatgt 132765
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 462      aaaggttcagtttcttctca 481
                ||||||||||||||||||||
Sbjct: 13228976 aaaggttcagtttcttctca 13228957



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 206     tggctatcaactgtttcaggtgagcaatgagc 237
               |||| ||||||||| || ||||||||||||||
Sbjct: 9057194 tggcgatcaactgtctctggtgagcaatgagc 9057163
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      gttcttactagtagtactaa 149
                ||||||||||||||||||||
Sbjct: 10959861 gttcttactagtagtactaa 10959880
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>dbj|AB057643.1| Rattus norvegicus sag mRNA for synArfGEF, complete cds
          Length = 7410

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 4468 tcctctgtgttcaccatgctcccc 4491
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>gb|AC068609.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-98L5, complete
              sequence
          Length = 192263

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    tgtctctctggtttctctgttgat 294
              |||||||||||||||| |||||||
Sbjct: 167528 tgtctctctggtttctttgttgat 167551
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>ref|XM_573819.1| PREDICTED: Rattus norvegicus similar to Transforming growth factor
            beta 1 induced transcript 4, isoform 1 (LOC498545), mRNA
          Length = 6586

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 579  ccatgagccactgcttccac 598
            ||||||||||||||||||||
Sbjct: 2775 ccatgagccactgcttccac 2756
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>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0035G04
          Length = 155636

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 206   tggctatcaactgtttcaggtgagcaatgagc 237
             |||| ||||||||| || ||||||||||||||
Sbjct: 27979 tggcgatcaactgtctctggtgagcaatgagc 27948
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>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0051H02
          Length = 136520

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 206    tggctatcaactgtttcaggtgagcaatgagc 237
              |||| ||||||||| || ||||||||||||||
Sbjct: 100790 tggcgatcaactgtctctggtgagcaatgagc 100759
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   aaaggttcagtttcttctca 481
             ||||||||||||||||||||
Sbjct: 50410 aaaggttcagtttcttctca 50391
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>dbj|AK070495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052A01, full
           insert sequence
          Length = 962

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 gttcttactagtagtactaa 149
           ||||||||||||||||||||
Sbjct: 745 gttcttactagtagtactaa 764
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>ref|NM_001033354.1| Mus musculus IQ motif and Sec7 domain 3 (Iqsec3), mRNA
          Length = 6840

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 3951 tcctctgtgttcaccatgctcccc 3974
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>dbj|AK122446.1| Mus musculus mRNA for mKIAA1110 protein
          Length = 6557

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  tcctctgtgttctccatgctcccc 385
            |||||||||||| |||||||||||
Sbjct: 3667 tcctctgtgttcaccatgctcccc 3690
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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  gttcttactagtagtactaa 149
            ||||||||||||||||||||
Sbjct: 6583 gttcttactagtagtactaa 6602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,418,961
Number of Sequences: 3902068
Number of extensions: 6418961
Number of successful extensions: 109205
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108896
Number of HSP's gapped (non-prelim): 309
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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