ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22o09 |
|---|---|
| Clone Library Name | barley_pub |
>PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 235 Score = 342 bits (876), Expect = 7e-94 Identities = 168/168 (100%), Positives = 168/168 (100%) Frame = -1 Query: 621 AATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTK 442 AATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTK Sbjct: 68 AATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTK 127 Query: 441 RRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSG 262 RRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSG Sbjct: 128 RRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSG 187 Query: 261 EKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY 118 EKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY Sbjct: 188 EKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY 235
>PSAF_FLATR (P46486) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 232 Score = 266 bits (680), Expect = 4e-71 Identities = 125/154 (81%), Positives = 141/154 (91%) Frame = -1 Query: 603 PAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENY 424 PA+ADI+GLTPCKESK FAKREKQS+KKL SSLK YAPDSAPALAI+AT++KTKRRF+NY Sbjct: 75 PASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNY 134 Query: 423 GKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAM 244 GK GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+ EKKP Sbjct: 135 GKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQ 194 Query: 243 REIIIDVELAARIIPRGFIWPVAAYRELINGDLV 142 +EIIIDV LA +++ RGF WPVAAYRE +NG+L+ Sbjct: 195 KEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228
>PSAF_SPIOL (P12355) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 231 Score = 264 bits (674), Expect = 2e-70 Identities = 124/159 (77%), Positives = 143/159 (89%) Frame = -1 Query: 618 ATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKR 439 + +P A ADIAGLTPCKESK FAKREKQ++KKL +SLK YA DSAPALAI+AT++KTK+ Sbjct: 69 SVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKK 128 Query: 438 RFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGE 259 RF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+ E Sbjct: 129 RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDE 188 Query: 258 KKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLV 142 KKP +EIIIDV LA+ ++ RGF WPVAAYREL+NG+LV Sbjct: 189 KKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
>PSAF_GUITH (O78457) Photosystem I reaction center subunit III (PSI-F)| Length = 183 Score = 186 bits (471), Expect = 6e-47 Identities = 88/162 (54%), Positives = 111/162 (68%) Frame = -1 Query: 609 PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFE 430 P + AD+AGL PCK SK F +R SVKKL S L KY P++ P LA++ I+KTK RF Sbjct: 17 PVASHADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFT 76 Query: 429 NYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKP 250 YG GLLCG+DGLPHLI G H GEF+ PG+ FLYIAGWIGWVGR+Y+ S KP Sbjct: 77 QYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKP 136 Query: 249 AMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EIIIDV +A I G+IWP AA++E +G+L+ + +I Sbjct: 137 TEKEIIIDVPVALSFISTGYIWPFAAFKEFTSGNLIAKEDEI 178
>PSAF_PORPU (P51193) Photosystem I reaction center subunit III (PSI-F)| Length = 185 Score = 181 bits (460), Expect = 1e-45 Identities = 86/164 (52%), Positives = 114/164 (69%) Frame = -1 Query: 615 TSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRR 436 ++P A++AGL PCK+S AF KR SVKKL + L KY ++ PALA+ I+KTK R Sbjct: 17 SNPIVVNAEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTR 76 Query: 435 FENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEK 256 F YG+ GLLCG+DGLPHLI G G+F+ PG+LFLYI GWIGWVGR YL++V+ Sbjct: 77 FATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTS 136 Query: 255 KPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 KP +EII+DV LA + + GF WP+AA++E +G L+ + DI Sbjct: 137 KPTEKEIILDVPLAVKFMSSGFAWPLAAWQEFSSGQLIAPNDDI 180
>PSAF_ODOSI (P49483) Photosystem I reaction center subunit III (PSI-F)| Length = 185 Score = 179 bits (454), Expect = 6e-45 Identities = 89/162 (54%), Positives = 110/162 (67%) Frame = -1 Query: 609 PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFE 430 P A ADI GLT C ES AF KR K SVKKL + KY S PALA+Q I++T+ RF+ Sbjct: 19 PNRALADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFD 78 Query: 429 NYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKP 250 Y + LLCG+DGLPHLI G H EFI PG F+YI+GWIGWVGR YL AVS K P Sbjct: 79 KYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNP 138 Query: 249 AMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 EIII+V LA +I+ G+IWP++A++E I+ DLV D ++ Sbjct: 139 TESEIIINVPLALKIMTTGYIWPISAWQEFISNDLVALDEEV 180
>PSAF_CYAPA (P48115) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 186 Score = 179 bits (453), Expect = 8e-45 Identities = 85/160 (53%), Positives = 111/160 (69%) Frame = -1 Query: 603 PAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENY 424 P AD+AGL PC +S AF +R K + ++L + LKKY P SAPA A+Q IDKT++RF+ Y Sbjct: 22 PVRADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKY 81 Query: 423 GKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAM 244 GLLCG+DGLPHLI G H GEF PG+LFLYIAG+IGW GRSYL AV+ Sbjct: 82 RNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTE 141 Query: 243 REIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EIIID+ +A + + +GF+WP+AA +E +G L D +I Sbjct: 142 KEIIIDIPVALQSVSKGFVWPLAALQEFSSGKLTARDEEI 181
>PSAF_CHLRE (P12356) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) (P21 protein) Length = 227 Score = 177 bits (448), Expect = 3e-44 Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 4/168 (2%) Frame = -1 Query: 615 TSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRR 436 ++P A ADIAGLTPC ESKA+AK EK+ +K L LK+Y DSAPA+A++AT+++TK R Sbjct: 55 SAPSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKAR 114 Query: 435 FENYGKFGLLCGSDGLPHLI----VSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAV 268 F NY K GLLCG+DGLPHLI ++ H GE P FLY+AG+IG+VGR YLIAV Sbjct: 115 FANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAV 174 Query: 267 SGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 GE KP +EIIIDV LA ++ +G WP+AA +EL G L+ + +I Sbjct: 175 KGEAKPTDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENI 222
>PSAF_CYACA (Q9TLW6) Photosystem I reaction center subunit III (PSI-F)| Length = 187 Score = 147 bits (370), Expect = 3e-35 Identities = 73/158 (46%), Positives = 94/158 (59%) Frame = -1 Query: 597 AADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGK 418 A + LTPC+ S F R ++KKL + L Y +S +I+ I+KTK RF+ Y K Sbjct: 25 ATHASTLTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKTKIRFDKYAK 84 Query: 417 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 238 LLCG DGLPHLI GD +H GEF P VLF+YIAGWIGW G+ YL KP E Sbjct: 85 SSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIAGWIGWAGKGYLQYSKTLTKPNENE 144 Query: 237 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 IIID+ A + + GF WP+ A +E NG L+ + +I Sbjct: 145 IIIDLPRALKYMFSGFAWPILALKEFKNGSLLASNDEI 182
>PSAF_SYNEN (P0A402) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 140 bits (354), Expect = 2e-33 Identities = 77/163 (47%), Positives = 97/163 (59%), Gaps = 2/163 (1%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT--KRRF 433 P A+AD+AGL PCK+S AF KR A A+ T D ++RF Sbjct: 19 PLASADVAGLVPCKDSPAFQKRA--------------------AAAVNTTADPASGQKRF 58 Query: 432 ENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKK 253 E Y + LCG DGLPHL+V G G+F+ P VLFLYIAGWIGWVGR+YLIAV + Sbjct: 59 ERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGE 116 Query: 252 PAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EIIIDV LA + + GF WP+AA +EL +G+L D +I Sbjct: 117 ANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEI 159
>PSAF_SYNEL (P0A401) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 140 bits (354), Expect = 2e-33 Identities = 77/163 (47%), Positives = 97/163 (59%), Gaps = 2/163 (1%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT--KRRF 433 P A+AD+AGL PCK+S AF KR A A+ T D ++RF Sbjct: 19 PLASADVAGLVPCKDSPAFQKRA--------------------AAAVNTTADPASGQKRF 58 Query: 432 ENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKK 253 E Y + LCG DGLPHL+V G G+F+ P VLFLYIAGWIGWVGR+YLIAV + Sbjct: 59 ERYSQ--ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGE 116 Query: 252 PAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EIIIDV LA + + GF WP+AA +EL +G+L D +I Sbjct: 117 ANEKEIIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEI 159
>PSAF_SYNP6 (P31083) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 159 Score = 140 bits (354), Expect = 2e-33 Identities = 76/161 (47%), Positives = 95/161 (59%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFEN 427 P A+AD+AGLTPC ES F +R A A + K RFEN Sbjct: 19 PQASADVAGLTPCSESPRFIQR-----------------------AEAAATPQAKARFEN 55 Query: 426 YGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPA 247 Y + LCG+DGLPHLIV G H G+FI P +LFLYIAGWIGWVGRSYL A+ +K A Sbjct: 56 YSQ--ALCGADGLPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDKDAA 113 Query: 246 MREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EI+IDV LA + GF WP+AA++E +G L+ +I Sbjct: 114 GKEIVIDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAKADEI 154
>PSAF_SYNY3 (P29256) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 165 Score = 130 bits (327), Expect = 3e-30 Identities = 70/163 (42%), Positives = 94/163 (57%) Frame = -1 Query: 612 SPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRF 433 +P +A D A LTPC E+ A+ + K + N P+S K R Sbjct: 18 APSASADDFANLTPCSENPAYLAKSKNFLNTTND------PNSG------------KIRA 59 Query: 432 ENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKK 253 E Y LCG +G PHLIV G H G+F+ P +LFLYIAGWIGWVGRSYLI + K Sbjct: 60 ERYAS--ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKN 117 Query: 252 PAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 P M+E++I+V LA + + GF+WP+AA E +G LV+ D++I Sbjct: 118 PEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKDSEI 160
>PSAF_ANAVT (P31091) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 122 bits (306), Expect = 8e-28 Identities = 69/161 (42%), Positives = 92/161 (57%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFEN 427 PPA A A LTPC E+ AF +L K A ++ A ++RFE Sbjct: 19 PPAKALGADLTPCAENPAF------------QALAKNARNTT------ADPQSGQKRFER 60 Query: 426 YGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPA 247 Y + LCG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL A+ + Sbjct: 61 YSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTE 118 Query: 246 MREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EI +D+ LA II GF WP AA +EL++G+L D++I Sbjct: 119 QKEIQLDLGLALPIIATGFAWPAAAVKELLSGELTAKDSEI 159
>PSAF_ANASP (P58564) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 121 bits (304), Expect = 1e-27 Identities = 68/161 (42%), Positives = 92/161 (57%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFEN 427 PPA A A LTPC E+ AF +L K A ++ A ++RFE Sbjct: 19 PPAKALGADLTPCAENPAF------------QALAKNARNTT------ADPQSGQKRFER 60 Query: 426 YGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPA 247 Y + LCG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL A+ + Sbjct: 61 YSQ--ALCGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTE 118 Query: 246 MREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EI +D+ +A II GF WP AA +EL++G+L D++I Sbjct: 119 QKEIQLDLGIALPIIATGFAWPAAAVKELLSGELTAKDSEI 159
>PSAF_MASLA (O31127) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 165 Score = 118 bits (295), Expect = 2e-26 Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Frame = -1 Query: 606 PPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFEN 427 PPA A A L PC ES AF +R + A A + K+RFE Sbjct: 19 PPAQALGADLVPCSESPAFQQRAQV------------------ARNTTADPESGKKRFER 60 Query: 426 YGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGE-KKP 250 Y + LCG +GLPHLIV G H G+F+ P +LFLYIAGWIGWVGR+YL + + Sbjct: 61 YSQ--ALCGPEGLPHLIVDGRLDHAGDFLIPSILFLYIAGWIGWVGRAYLQTIKKQGSNV 118 Query: 249 AMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 124 +EI I++ +A I+ GF WP AA +E ++G+L D +I Sbjct: 119 EQKEIQIELPIALPIMLSGFAWPAAAIKEFLSGELTAKDEEI 160
>PSAF_PROMA (Q9X7I4) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 183 Score = 97.4 bits (241), Expect = 3e-20 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Frame = -1 Query: 471 AIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSG---------DQRHWGEFITPGVLFL 319 A QAT K RFE Y K CG DGLPHL+++ ++ H G+ + PG +F+ Sbjct: 55 ASQATTPKDIARFERYSKAS--CGDDGLPHLVIAATIEPWGALANRHHEGDILIPGHIFI 112 Query: 318 YIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVV 139 Y+AG IGW GR YL A K PA EIIID LA + + +G WPV A ++ +GDL Sbjct: 113 YVAGIIGWSGREYLRASKKTKNPAENEIIIDFALARQCLIKGAAWPVEANKQGRSGDLRE 172 Query: 138 DDADI 124 D +I Sbjct: 173 KDENI 177
>PSAF_GLOVI (Q7NH05) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 181 Score = 93.2 bits (230), Expect = 6e-19 Identities = 58/146 (39%), Positives = 79/146 (54%) Frame = -1 Query: 570 CKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDG 391 CK+ A+ + + Q ++ + +K D P +A TK++FE Y CG DG Sbjct: 41 CKDVPAYQELKTQRLE----AAQKAQADGKPVTFNEAG---TKQKFERYDT--AYCGQDG 91 Query: 390 LPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA 211 PHLI SG G+F+ P VLFL+IAG +GW GR YL E K EIIID+ A Sbjct: 92 YPHLITSGQLDRAGDFLIPSVLFLWIAGALGWAGRLYL----AESKGPEDEIIIDLPKAI 147 Query: 210 RIIPRGFIWPVAAYRELINGDLVVDD 133 + + G IWPV A ELI+G + V + Sbjct: 148 KCLLLGLIWPVQAIPELISGKIRVPE 173
>PSAF_CUCSA (P42048) Photosystem I reaction center subunit III (Photosystem I| 18.5 kDa protein) (PSI-F) (PS I subunit 7) (Fragment) Length = 26 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = -1 Query: 591 DIAGLTPCKESKAFAKREKQSVKKL 517 DI+GLTPCKESK F KREKQ K L Sbjct: 1 DISGLTPCKESKQFXKREKQQXKXL 25
>PSAF_PEA (P20119) Photosystem I reaction center subunit III| (Light-harvesting complex I 17 kDa protein) (PSI-F) (Fragment) Length = 20 Score = 38.9 bits (89), Expect = 0.012 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -1 Query: 588 IAGLTPCKESKAFAKREKQ 532 I+GLTPCKESK FAKREKQ Sbjct: 2 ISGLTPCKESKQFAKREKQ 20
>PSAF_MAIZE (P13193) Photosystem I reaction center subunit III| (Light-harvesting complex I 17 kDa protein) (PSI-F) (Fragment) Length = 20 Score = 33.1 bits (74), Expect = 0.68 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = -1 Query: 588 IAGLTPCKESKAFAKREK 535 IAGLTP KESKAFAK EK Sbjct: 2 IAGLTPPKESKAFAKXEK 19
>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development| regulatory protein 1) (RAE-28) Length = 1012 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +2 Query: 290 PTQPIQPAM*RKSTPGVMNSPQCRWSPLTMRWGRPSEPQSRPNLP 424 PTQ + P+ ++ ++ P + SPLT+ P EP S+P +P Sbjct: 462 PTQQVPPSQSQQQAQTLVVQPMLQSSPLTL----PPEPTSKPPIP 502
>LEPA_BURS3 (Q39I75) GTP-binding protein lepA| Length = 597 Score = 30.8 bits (68), Expect = 3.4 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Frame = -1 Query: 621 AATSPPPAAADI-----AGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQAT 457 AA P P ++ AGL P + ++ A RE KLN + +Y P+ + AL Sbjct: 280 AAVEPLPGFKEVKPQVFAGLYPVEANQYDALRESLEKLKLNDASLQYEPEVSQALG---- 335 Query: 456 IDKTKRRFENYGKFGLLCGSDGLPHL 379 FG CG GL H+ Sbjct: 336 -------------FGFRCGFLGLLHM 348
>NGAP_HUMAN (Q9UJF2) Ras GTPase-activating protein nGAP (RAS protein| activator-like 1) Length = 1139 Score = 30.4 bits (67), Expect = 4.4 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = -1 Query: 618 ATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTK 442 +TS P + D A +P K F+KR K S+K+ S K S ++++T D+++ Sbjct: 21 STSEKPNSMDTANTSPFKVPGFFSKRLKGSIKRTKSQSKLDRNTSFRLPSLRSTDDRSR 79
>EFTS_RALSO (Q8XZJ0) Elongation factor Ts (EF-Ts)| Length = 292 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +1 Query: 250 GLLLAADGDEVAASDPADPAGDVEEEHAGGDELAPVPLVAAD 375 G+++A DGDEVAA D A A ++ DE+ P L+A + Sbjct: 159 GVMVAFDGDEVAAKDVAMHAAAMKPVALSSDEV-PAELIAKE 199
>HIS82_BORPE (Q7VSZ0) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 5.7 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = -1 Query: 507 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 334 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 333 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 193 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 192 FIWPVAAYRELIN---GDLVVDDA 130 +WP AA R +++ G +V+D+A Sbjct: 172 DLWPDAAVRAILDAAPGLVVLDEA 195
>HIS82_BORPA (Q7W2Y3) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 5.7 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = -1 Query: 507 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 334 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 333 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 193 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 192 FIWPVAAYRELIN---GDLVVDDA 130 +WP AA R +++ G +V+D+A Sbjct: 172 GLWPDAAVRAILDAAPGLVVLDEA 195
>HIS82_BORBR (Q7WDY3) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 5.7 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = -1 Query: 507 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 334 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 333 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 193 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 192 FIWPVAAYRELIN---GDLVVDDA 130 +WP AA R +++ G +V+D+A Sbjct: 172 GLWPDAAVRAILDAAPGLVVLDEA 195
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 30.0 bits (66), Expect = 5.7 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = -3 Query: 610 PAPRG---RRHRRPDPVQGVQGLRQAGE--AVGQEAQLVAQEVRARLRPGARHP 464 P+P G RRP+ + VQ LR AGE V + + ++Q++R R PG RHP Sbjct: 2375 PSPAGTPLELVRRPERSRSVQDLRVAGEPGLVRRLSLSLSQKLR-RTPPGQRHP 2427
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.0 bits (66), Expect = 5.7 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = -3 Query: 610 PAPRG---RRHRRPDPVQGVQGLRQAGE--AVGQEAQLVAQEVRARLRPGARHP 464 P+P G RRP+ + VQ LR AGE V + + ++Q++R R PG RHP Sbjct: 2378 PSPAGTPLELVRRPERSRSVQDLRVAGEPGLVRRLSLSLSQKLR-RTPPGQRHP 2430
>BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc finger protein| 340) Length = 589 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +1 Query: 271 GDEVAASDPADPAGDVEEEHAGGDELAPVPLVAADD 378 GD DP DP G+ EE + LAP + ADD Sbjct: 530 GDGPYLEDPEDPRGEAEELGEDDEGLAPEDALLADD 565
>YHBP_ECOL6 (Q8FD95) UPF0306 protein yhbP| Length = 140 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -1 Query: 114 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 28 L A+ WLA + V W + EG LWC + + Sbjct: 4 LTAISRWLAKQHVVTWCVQQEGELWCANAF 33
>YHBP_ECO57 (Q8XA94) UPF0306 protein yhbP| Length = 147 Score = 29.3 bits (64), Expect = 9.8 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -1 Query: 114 LAAMRAWLASRSQVRWAAEDEG-LWCRSVW 28 L A+ WLA + V W + EG LWC + + Sbjct: 4 LTAISRWLAKQHVVTWCVQQEGELWCANAF 33
>UL34_HCMVA (P16812) Hypothetical protein UL34| Length = 407 Score = 29.3 bits (64), Expect = 9.8 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Frame = -3 Query: 619 RHLPAPRGRRHRRPDPV-------------QGVQGLRQA-GEAVGQEAQLVAQEVRARLR 482 +HLP P G RR + QG+ L++A E E Q V +R RL+ Sbjct: 49 KHLPVPPGGCSRRNSNLFVFCTERDYRKFHQGIAQLKRAPAELDPHEIQQVTASIRCRLQ 108 Query: 481 PGARHP 464 P R P Sbjct: 109 PSLREP 114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.133 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,351,215 Number of Sequences: 219361 Number of extensions: 1231953 Number of successful extensions: 4082 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4069 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
