ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 402 e-109
2dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 402 e-109
3dbj|AK071349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
4gb|AY107883.1| Zea mays PCO131850 mRNA sequence 295 7e-77
5gb|DQ333819.1| Hynobius chinensis mitochondrion, complete genome 42 1.8
6gb|DQ333811.1| Hynobius leechii mitochondrion, complete genome 42 1.8
7gb|DQ333808.1| Hynobius amjiensis mitochondrion, complete genome 42 1.8
8gb|AC116523.7| Mus musculus chromosome 9, clone RP24-349L11, com... 42 1.8
9gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, com... 42 1.8
10dbj|BS000643.3| Pan troglodytes chromosome Y clone: PTB-307J21, ... 42 1.8
11dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, ... 42 1.8
12gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.8
13gb|AC101696.14| Mus musculus chromosome 1, clone RP23-238M18, co... 42 1.8
14gb|AC009234.3| Homo sapiens BAC clone RP11-358H12 from 2, comple... 42 1.8
15gb|AC087384.13| Homo sapiens chromosome 8, clone RP11-689G24, co... 42 1.8
16gb|AY659995.1| Ambystoma calforniense mitochondrion, complete ge... 42 1.8
17gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complet... 42 1.8
18ref|NM_104869.2| Arabidopsis thaliana unknown protein AT1G61870 ... 40 7.1
19ref|NM_125944.2| Arabidopsis thaliana ATP binding / microtubule ... 40 7.1
20gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, co... 40 7.1
21gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.1
22gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosom... 40 7.1
23emb|AL451103.7| Human DNA sequence from clone RP11-172M3 on chro... 40 7.1
24gb|BT009692.1| Arabidopsis thaliana At1g61870 gene, complete cds 40 7.1
25emb|CR857681.1| Pongo pygmaeus mRNA; cDNA DKFZp469C205 (from clo... 40 7.1
26emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on ch... 40 7.1
27emb|AL731849.5| Mouse DNA sequence from clone RP23-208A2 on chro... 40 7.1
28gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, ... 40 7.1
29gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence 40 7.1
30gb|AY062858.1| Arabidopsis thaliana Unknown protein (At1g61870; ... 40 7.1
31gb|AF428391.1|AF428391 Arabidopsis thaliana At1g61870/F8K4_8 mRN... 40 7.1
32emb|BX815172.1|CNS0ACS4 Arabidopsis thaliana Full-length cDNA Co... 40 7.1
33gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complet... 40 7.1
34gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complet... 40 7.1
35gb|AC007680.2| Homo sapiens BAC clone RP11-354L14 from 2, comple... 40 7.1
36dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.1
37gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, compl... 40 7.1
38gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, compl... 40 7.1
39emb|CT573097.3| RP43-080H03, complete sequence 40 7.1
40dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.1
41emb|CR846102.12| Zebrafish DNA sequence from clone DKEY-50I13 in... 40 7.1
42gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 se... 40 7.1
43gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, comp... 40 7.1 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  402 bits (203), Expect = e-109
 Identities = 338/383 (88%)
 Strand = Plus / Plus

                                                                           
Query: 142     aatgaactaacactatgatctgacgtccttgaaaacaccacctctctccatctccgcaac 201
               |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5993714 aatgaactaaaactatgatctgacatccttgaaaacaccacctttctccatctccgcaac 5993773

                                                                           
Query: 202     aatctctttcaaggcaggtactttgctagctaacgttctgtacagtctagaatacctggc 261
                || ||||||||||| ||||||||| ||||||  |||||||||||||||||||| |||||
Sbjct: 5993774 gatgtctttcaaggctggtactttgttagctagagttctgtacagtctagaatatctggc 5993833

                                                                           
Query: 262     tcttgtgccatcggcggatcgtgcaagggcaagcaagctcactgcttcgggcaattgctc 321
               |||||| |||||||||| |||||| |||||||||||||| | |||||| || |||| |||
Sbjct: 5993834 tcttgtaccatcggcggttcgtgccagggcaagcaagctgattgcttctggtaattcctc 5993893

                                                                           
Query: 322     aaacacgcctttcatttcctcaaagcccatctctgcaagaacagatggtcttggaacaac 381
               ||| || ||||| ||||||||||||| ||| ||||||||||| |||||  ||||||||||
Sbjct: 5993894 aaagacaccttttatttcctcaaagctcatttctgcaagaactgatggctttggaacaac 5993953

                                                                           
Query: 382     acggattacctcaccacctttaggttcctgaacccgttgatctgccttgataaccagttc 441
                ||||||| |||| ||||||||||||||||||    ||| || ||||| || ||||||||
Sbjct: 5993954 tcggattatctcatcacctttaggttcctgaattttttggtcagccttaatgaccagttc 5994013

                                                                           
Query: 442     acagctcgaatttgctccgcattttatgatgaaaggtgctgttgtcccggtgttaaactg 501
               |||||||||||||||||| |||||||||||||| || |||| ||| || ||||| |||||
Sbjct: 5994014 acagctcgaatttgctccacattttatgatgaatggggctgatgttccagtgttgaactg 5994073

                                      
Query: 502     cagtacgttccactgtgaaactt 524
                ||||||||||||||||||||||
Sbjct: 5994074 tagtacgttccactgtgaaactt 5994096



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 47      aatgctacaacataggcttgctcatggtgtaaacagaaaa 86
               |||| ||||||||||||||| |||| || |||||| ||||
Sbjct: 5993604 aatgttacaacataggcttgttcattgtataaacaaaaaa 5993643
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0024N18
          Length = 128739

 Score =  402 bits (203), Expect = e-109
 Identities = 338/383 (88%)
 Strand = Plus / Plus

                                                                          
Query: 142    aatgaactaacactatgatctgacgtccttgaaaacaccacctctctccatctccgcaac 201
              |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 115366 aatgaactaaaactatgatctgacatccttgaaaacaccacctttctccatctccgcaac 115425

                                                                          
Query: 202    aatctctttcaaggcaggtactttgctagctaacgttctgtacagtctagaatacctggc 261
               || ||||||||||| ||||||||| ||||||  |||||||||||||||||||| |||||
Sbjct: 115426 gatgtctttcaaggctggtactttgttagctagagttctgtacagtctagaatatctggc 115485

                                                                          
Query: 262    tcttgtgccatcggcggatcgtgcaagggcaagcaagctcactgcttcgggcaattgctc 321
              |||||| |||||||||| |||||| |||||||||||||| | |||||| || |||| |||
Sbjct: 115486 tcttgtaccatcggcggttcgtgccagggcaagcaagctgattgcttctggtaattcctc 115545

                                                                          
Query: 322    aaacacgcctttcatttcctcaaagcccatctctgcaagaacagatggtcttggaacaac 381
              ||| || ||||| ||||||||||||| ||| ||||||||||| |||||  ||||||||||
Sbjct: 115546 aaagacaccttttatttcctcaaagctcatttctgcaagaactgatggctttggaacaac 115605

                                                                          
Query: 382    acggattacctcaccacctttaggttcctgaacccgttgatctgccttgataaccagttc 441
               ||||||| |||| ||||||||||||||||||    ||| || ||||| || ||||||||
Sbjct: 115606 tcggattatctcatcacctttaggttcctgaattttttggtcagccttaatgaccagttc 115665

                                                                          
Query: 442    acagctcgaatttgctccgcattttatgatgaaaggtgctgttgtcccggtgttaaactg 501
              |||||||||||||||||| |||||||||||||| || |||| ||| || ||||| |||||
Sbjct: 115666 acagctcgaatttgctccacattttatgatgaatggggctgatgttccagtgttgaactg 115725

                                     
Query: 502    cagtacgttccactgtgaaactt 524
               ||||||||||||||||||||||
Sbjct: 115726 tagtacgttccactgtgaaactt 115748



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 47     aatgctacaacataggcttgctcatggtgtaaacagaaaa 86
              |||| ||||||||||||||| |||| || |||||| ||||
Sbjct: 115256 aatgttacaacataggcttgttcattgtataaacaaaaaa 115295
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>dbj|AK071349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093G22, full
           insert sequence
          Length = 966

 Score =  402 bits (203), Expect = e-109
 Identities = 338/383 (88%)
 Strand = Plus / Minus

                                                                       
Query: 142 aatgaactaacactatgatctgacgtccttgaaaacaccacctctctccatctccgcaac 201
           |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 750 aatgaactaaaactatgatctgacatccttgaaaacaccacctttctccatctccgcaac 691

                                                                       
Query: 202 aatctctttcaaggcaggtactttgctagctaacgttctgtacagtctagaatacctggc 261
            || ||||||||||| ||||||||| ||||||  |||||||||||||||||||| |||||
Sbjct: 690 gatgtctttcaaggctggtactttgttagctagagttctgtacagtctagaatatctggc 631

                                                                       
Query: 262 tcttgtgccatcggcggatcgtgcaagggcaagcaagctcactgcttcgggcaattgctc 321
           |||||| |||||||||| |||||| |||||||||||||| | |||||| || |||| |||
Sbjct: 630 tcttgtaccatcggcggttcgtgccagggcaagcaagctgattgcttctggtaattcctc 571

                                                                       
Query: 322 aaacacgcctttcatttcctcaaagcccatctctgcaagaacagatggtcttggaacaac 381
           ||| || ||||| ||||||||||||| ||| ||||||||||| |||||  ||||||||||
Sbjct: 570 aaagacaccttttatttcctcaaagctcatttctgcaagaactgatggctttggaacaac 511

                                                                       
Query: 382 acggattacctcaccacctttaggttcctgaacccgttgatctgccttgataaccagttc 441
            ||||||| |||| ||||||||||||||||||    ||| || ||||| || ||||||||
Sbjct: 510 tcggattatctcatcacctttaggttcctgaattttttggtcagccttaatgaccagttc 451

                                                                       
Query: 442 acagctcgaatttgctccgcattttatgatgaaaggtgctgttgtcccggtgttaaactg 501
           |||||||||||||||||| |||||||||||||| || |||| ||| || ||||| |||||
Sbjct: 450 acagctcgaatttgctccacattttatgatgaatggggctgatgttccagtgttgaactg 391

                                  
Query: 502 cagtacgttccactgtgaaactt 524
            ||||||||||||||||||||||
Sbjct: 390 tagtacgttccactgtgaaactt 368



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 47  aatgctacaacataggcttgctcatggtgtaaacagaaaa 86
           |||| ||||||||||||||| |||| || |||||| ||||
Sbjct: 860 aatgttacaacataggcttgttcattgtataaacaaaaaa 821
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>gb|AY107883.1| Zea mays PCO131850 mRNA sequence
          Length = 1183

 Score =  295 bits (149), Expect = 7e-77
 Identities = 303/353 (85%), Gaps = 1/353 (0%)
 Strand = Plus / Minus

                                                                       
Query: 170 ttgaaaacaccacctctctccatctccgcaacaatctctttcaaggcaggtactttgcta 229
           |||||||||||||||||||||||||| |||||| ||||||||||||| |  |||||||| 
Sbjct: 971 ttgaaaacaccacctctctccatctctgcaacagtctctttcaaggccgtcactttgctg 912

                                                                       
Query: 230 gctaacgttctgtacagtctagaatacctggctcttgtgccatcggcggatcgtgcaagg 289
           ||||| |||||||||| ||| ||||||||||| ||||| ||||| || | |||||| | |
Sbjct: 911 gctaaggttctgtacaatcttgaatacctggcccttgtaccatctgctgttcgtgccaag 852

                                                                       
Query: 290 gcaagcaagctcactgcttcgggcaattgctcaaacacgcctttcatttcctcaaagccc 349
           ||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| | |
Sbjct: 851 gcaagcaagctaactgcctctggcaattgctcaaacacaccttttatttcctcaaaactc 792

                                                                       
Query: 350 atctctgcaagaacagatggtcttggaacaacacggattacctcaccacctttaggttcc 409
           |  || |||||||| | ||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 791 aagtccgcaagaactgttggtcttggaacaacacggatcacctcgccacctttaggctcc 732

                                                                       
Query: 410 tgaacccgttgatctgccttgataaccagttcacagctcgaatttgctccgcattttatg 469
           || || ||  |||| ||||| || ||||||||||  || ||||||| |||||| ||||||
Sbjct: 731 tggactcgcagatcagccttaatcaccagttcaccactggaatttg-tccgcactttatg 673

                                                                
Query: 470 atgaaaggtgctgttgtcccggtgttaaactgcagtacgttccactgtgaaac 522
           |||||||| || || || || ||||| ||||||||||| ||||||||||||||
Sbjct: 672 atgaaaggcgcagtcgttcccgtgttgaactgcagtacattccactgtgaaac 620
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>gb|DQ333819.1| Hynobius chinensis mitochondrion, complete genome
          Length = 16408

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 132  ataactacaaaatgaactaacacta 156
            ||||||||||||| |||||||||||
Sbjct: 7194 ataactacaaaattaactaacacta 7218
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>gb|DQ333811.1| Hynobius leechii mitochondrion, complete genome
          Length = 16428

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 132  ataactacaaaatgaactaacacta 156
            ||||||||||||| |||||||||||
Sbjct: 7186 ataactacaaaattaactaacacta 7210
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>gb|DQ333808.1| Hynobius amjiensis mitochondrion, complete genome
          Length = 16401

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 132  ataactacaaaatgaactaacacta 156
            ||||||||||||| |||||||||||
Sbjct: 7177 ataactacaaaattaactaacacta 7201
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>gb|AC116523.7| Mus musculus chromosome 9, clone RP24-349L11, complete sequence
          Length = 184012

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 337    ttcctcaaagcccatctctgc 357
              |||||||||||||||||||||
Sbjct: 152631 ttcctcaaagcccatctctgc 152651
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>gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, complete sequence
          Length = 163250

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   atatacaacattacatataac 136
             |||||||||||||||||||||
Sbjct: 97220 atatacaacattacatataac 97240
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>dbj|BS000643.3| Pan troglodytes chromosome Y clone: PTB-307J21, complete sequence
          Length = 147286

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    atatacaacattacatataac 136
              |||||||||||||||||||||
Sbjct: 122786 atatacaacattacatataac 122806
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>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence
          Length = 199770

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   atatacaacattacatataac 136
             |||||||||||||||||||||
Sbjct: 22422 atatacaacattacatataac 22442
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 116      atatacaacattacatataac 136
                |||||||||||||||||||||
Sbjct: 17699997 atatacaacattacatataac 17699977
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>gb|AC101696.14| Mus musculus chromosome 1, clone RP23-238M18, complete sequence
          Length = 162270

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tacatataactacaaaatgaa 147
              |||||||||||||||||||||
Sbjct: 117787 tacatataactacaaaatgaa 117807
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>gb|AC009234.3| Homo sapiens BAC clone RP11-358H12 from 2, complete sequence
          Length = 157289

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 123    acattacatataactacaaaa 143
              |||||||||||||||||||||
Sbjct: 137730 acattacatataactacaaaa 137750
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>gb|AC087384.13| Homo sapiens chromosome 8, clone RP11-689G24, complete sequence
          Length = 110281

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 179   ccacctctctccatctccgca 199
             |||||||||||||||||||||
Sbjct: 36153 ccacctctctccatctccgca 36133
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>gb|AY659995.1| Ambystoma calforniense mitochondrion, complete genome
          Length = 16374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 132  ataactacaaaatgaactaacacta 156
            ||||||||||||| |||||||||||
Sbjct: 7137 ataactacaaaattaactaacacta 7161
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>gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complete sequence
          Length = 168300

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 337   ttcctcaaagcccatctctgc 357
             |||||||||||||||||||||
Sbjct: 74962 ttcctcaaagcccatctctgc 74982
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>ref|NM_104869.2| Arabidopsis thaliana unknown protein AT1G61870 mRNA, complete cds
          Length = 1612

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ctctccatctccgcaacaat 204
           ||||||||||||||||||||
Sbjct: 707 ctctccatctccgcaacaat 688
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>ref|NM_125944.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G65460 mRNA,
            complete cds
          Length = 3846

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 455  gctccgcattttatgatgaa 474
            ||||||||||||||||||||
Sbjct: 3542 gctccgcattttatgatgaa 3523
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>gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, complete sequence
          Length = 153996

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    acatataactacaaaatgaa 147
              ||||||||||||||||||||
Sbjct: 144525 acatataactacaaaatgaa 144506
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>gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-251N15, complete
             sequence
          Length = 141783

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   gcaagcaagctcactgcttc 309
             ||||||||||||||||||||
Sbjct: 39682 gcaagcaagctcactgcttc 39663
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>gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosome 14, complete
             sequence
          Length = 198165

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tataactacaaaatgaacta 150
             ||||||||||||||||||||
Sbjct: 86983 tataactacaaaatgaacta 87002
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>emb|AL451103.7| Human DNA sequence from clone RP11-172M3 on chromosome Xp21.1-21.2
            Contains a CpG island, complete sequence
          Length = 175384

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  ttacatataactacaaaatg 145
            ||||||||||||||||||||
Sbjct: 5839 ttacatataactacaaaatg 5820
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>gb|BT009692.1| Arabidopsis thaliana At1g61870 gene, complete cds
          Length = 1227

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ctctccatctccgcaacaat 204
           ||||||||||||||||||||
Sbjct: 644 ctctccatctccgcaacaat 625
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>emb|CR857681.1| Pongo pygmaeus mRNA; cDNA DKFZp469C205 (from clone DKFZp469C205)
          Length = 4185

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  cattacatataactacaaaa 143
            ||||||||||||||||||||
Sbjct: 2660 cattacatataactacaaaa 2679
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>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains
            part of the Car10 gene for carbonic anhydrase 10,
            complete sequence
          Length = 146735

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 337  ttcctcaaagcccatctctg 356
            ||||||||||||||||||||
Sbjct: 1674 ttcctcaaagcccatctctg 1693
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>emb|AL731849.5| Mouse DNA sequence from clone RP23-208A2 on chromosome 11 Contains part
              of the Car10 gene for carbonic anhydrase 10, complete
              sequence
          Length = 114636

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    ttcctcaaagcccatctctg 356
              ||||||||||||||||||||
Sbjct: 114310 ttcctcaaagcccatctctg 114329
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>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete
              Sequence, complete sequence
          Length = 223882

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    acatataactacaaaatgaa 147
              ||||||||||||||||||||
Sbjct: 143208 acatataactacaaaatgaa 143227
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>gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence
          Length = 177017

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   ccttgataaccagttcacag 445
             ||||||||||||||||||||
Sbjct: 85014 ccttgataaccagttcacag 84995
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>gb|AY062858.1| Arabidopsis thaliana Unknown protein (At1g61870; F8K4.8) mRNA,
           complete cds
          Length = 1532

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ctctccatctccgcaacaat 204
           ||||||||||||||||||||
Sbjct: 704 ctctccatctccgcaacaat 685
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>gb|AF428391.1|AF428391 Arabidopsis thaliana At1g61870/F8K4_8 mRNA, complete cds
          Length = 1613

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ctctccatctccgcaacaat 204
           ||||||||||||||||||||
Sbjct: 707 ctctccatctccgcaacaat 688
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>emb|BX815172.1|CNS0ACS4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS3ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1561

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ctctccatctccgcaacaat 204
           ||||||||||||||||||||
Sbjct: 696 ctctccatctccgcaacaat 677
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>gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complete sequence
          Length = 127148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   aatgcatccatatacaacat 126
             ||||||||||||||||||||
Sbjct: 86481 aatgcatccatatacaacat 86462
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>gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complete sequence
          Length = 124146

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   tgtaaacagaaaaggttaca 93
            ||||||||||||||||||||
Sbjct: 6454 tgtaaacagaaaaggttaca 6435
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>gb|AC007680.2| Homo sapiens BAC clone RP11-354L14 from 2, complete sequence
          Length = 146333

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 121  caacattacatataactacaaaat 144
            ||||||||||||||||| ||||||
Sbjct: 7234 caacattacatataactgcaaaat 7211
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>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5
          Length = 88356

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   gctccgcattttatgatgaa 474
             ||||||||||||||||||||
Sbjct: 74034 gctccgcattttatgatgaa 74053
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>gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, complete sequence
          Length = 191616

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 171    tgaaaacaccacctctctccatct 194
              |||||||| |||||||||||||||
Sbjct: 155217 tgaaaacatcacctctctccatct 155240
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>gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, complete sequence
          Length = 177341

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    tgaaaacaccacctctctccatct 194
              |||||||| |||||||||||||||
Sbjct: 172121 tgaaaacatcacctctctccatct 172098
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>emb|CT573097.3| RP43-080H03, complete sequence
          Length = 174747

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  ttacatataactacaaaatg 145
            ||||||||||||||||||||
Sbjct: 1173 ttacatataactacaaaatg 1192
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>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11
          Length = 200610

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     cagaaaaggttacatgggac 99
              ||||||||||||||||||||
Sbjct: 139941 cagaaaaggttacatgggac 139922
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>emb|CR846102.12| Zebrafish DNA sequence from clone DKEY-50I13 in linkage group 14,
             complete sequence
          Length = 174004

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 449   gaatttgctccgcattttatgatg 472
             |||||||||| |||||||||||||
Sbjct: 57166 gaatttgctctgcattttatgatg 57189
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>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence
          Length = 115641

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   ctctccatctccgcaacaat 204
             ||||||||||||||||||||
Sbjct: 42850 ctctccatctccgcaacaat 42869
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>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ctctcttaacccaagacaat 49
             ||||||||||||||||||||
Sbjct: 60193 ctctcttaacccaagacaat 60212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,469,692
Number of Sequences: 3902068
Number of extensions: 4469692
Number of successful extensions: 83749
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83614
Number of HSP's gapped (non-prelim): 131
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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