ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23d04 |
|---|---|
| Clone Library Name | barley_pub |
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 94.4 bits (233), Expect = 7e-20 Identities = 46/50 (92%), Positives = 47/50 (94%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 D RSVCTEAGMYAIRARRKTVTEK FLD+VNKVIKGYQKFSATPKYMV N Sbjct: 376 DIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 425
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 94.4 bits (233), Expect = 7e-20 Identities = 46/50 (92%), Positives = 47/50 (94%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 D RSVCTEAGMYAIRARRKTVTEK FLD+VNKVIKGYQKFSATPKYMV N Sbjct: 377 DIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 94.4 bits (233), Expect = 7e-20 Identities = 46/50 (92%), Positives = 47/50 (94%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 D RSVCTEAGMYAIRARRKTVTEK FLD+VNKVIKGYQKFSATPKYMV N Sbjct: 377 DIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 94.4 bits (233), Expect = 7e-20 Identities = 46/50 (92%), Positives = 47/50 (94%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 D RSVCTEAGMYAIRARRKTVTEK FLD+VNKVIKGYQKFSATPKYMV N Sbjct: 377 DIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 79.7 bits (195), Expect = 2e-15 Identities = 35/50 (70%), Positives = 43/50 (86%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL+++NKV+KGY KFSATP+Y+ N Sbjct: 386 EIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRYLTHN 435
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 79.0 bits (193), Expect = 3e-15 Identities = 37/50 (74%), Positives = 42/50 (84%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL++VNKVIK Y KFSATP+YM N Sbjct: 384 EIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 78.6 bits (192), Expect = 4e-15 Identities = 37/50 (74%), Positives = 42/50 (84%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL++VNKVIK Y KFSATP+YM N Sbjct: 383 EIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 432
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 78.6 bits (192), Expect = 4e-15 Identities = 37/50 (74%), Positives = 42/50 (84%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL++VNKVIK Y KFSATP+YM N Sbjct: 383 EIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 432
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 78.6 bits (192), Expect = 4e-15 Identities = 37/50 (74%), Positives = 42/50 (84%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL++VNKVIK Y KFSATP+YM N Sbjct: 383 EIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 432
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 72.0 bits (175), Expect = 4e-13 Identities = 34/50 (68%), Positives = 41/50 (82%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 + RSVCTEAGM+AIRARRK TEK FL +V+KVI GY+KFS+T +YM N Sbjct: 418 ELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRYMQYN 467
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 70.9 bits (172), Expect = 8e-13 Identities = 33/47 (70%), Positives = 39/47 (82%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYM 117 + RSVCTEAGM+AIRARR+ TEK FLD+V KV+KG QKFS+T YM Sbjct: 388 ELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADYM 434
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 42.7 bits (99), Expect = 2e-04 Identities = 19/33 (57%), Positives = 26/33 (78%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D R+VCTEAGM+AIRA R+ V ++ F+ +V KV Sbjct: 359 DLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/39 (48%), Positives = 29/39 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQK 141 D +++ TEAGM+AIR RR VT++ FL +V+KV+ +K Sbjct: 348 DLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/39 (48%), Positives = 29/39 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQK 141 D +++ TEAGM+AIR RR VT++ FL +V+KV+ +K Sbjct: 348 DLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/34 (50%), Positives = 26/34 (76%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVI 156 D +++CTEAGM+AIR R VT F+D+V+K++ Sbjct: 360 DLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM 393
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/39 (46%), Positives = 29/39 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQK 141 D +++ TEAGM+AIR RR VT++ FL +++KV+ +K Sbjct: 345 DLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKK 383
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVI 156 D +++ TEAGM+AIR RR VT+ FL +V+KVI Sbjct: 346 DLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI 379
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 40.8 bits (94), Expect = 0.001 Identities = 20/39 (51%), Positives = 27/39 (69%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQK 141 D + VCTEAGMYA+R RR VT++ F +V KV+ Q+ Sbjct: 357 DVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQE 395
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/35 (51%), Positives = 28/35 (80%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + ++VCTEAGMYA+R RR V+++ F +V+KV+K Sbjct: 341 ELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMK 375
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D +++CTEAGM+AIR R VT F ++ KV+K Sbjct: 350 DIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLK 384
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/33 (54%), Positives = 24/33 (72%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D R+VCTEAGM+AIRA V ++ F+ +V KV Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/33 (54%), Positives = 24/33 (72%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D R+VCTEAGM+AIRA V ++ F+ +V KV Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/33 (54%), Positives = 24/33 (72%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D R+VCTEAGM+AIRA V ++ F+ +V KV Sbjct: 342 DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 358 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 358 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 358 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 358 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 358 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S V+ Y+K TP+ Sbjct: 393 DIKAICTEAGLMALRERRMKVTNEDFKKSKESVL--YRKKEGTPE 435
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S V+ Y+K TP+ Sbjct: 394 DIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S V+ Y+K TP+ Sbjct: 394 DIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S V+ Y+K TP+ Sbjct: 394 DIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 354 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 388
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 357 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 391
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + + VCTEAGMYA+R RR VT++ F +V KV++ Sbjct: 352 EVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 386
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 38.1 bits (87), Expect = 0.006 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D S+C EAGM A+RA R VT++ F ++ +KV++ Sbjct: 343 DINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVE 377
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 37.4 bits (85), Expect = 0.010 Identities = 18/45 (40%), Positives = 27/45 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S + Y+K TP+ Sbjct: 394 DIKAICTEAGLMALRERRMKVTNEDFKKSKENFL--YKKTEGTPE 436
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFS 135 D ++VCTEAGM+AIR R+ + F ++++K+ +K S Sbjct: 356 DLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEKCS 396
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 37.0 bits (84), Expect = 0.013 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVI 156 + + VCTEAGM+A+R RR VT++ F +V KV+ Sbjct: 355 ELKGVCTEAGMFALRERRVHVTQEDFELAVAKVL 388
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 37.0 bits (84), Expect = 0.013 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVI 156 D +++CTEAGM AIR R VT FL +V++V+ Sbjct: 388 DIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVM 421
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 35.4 bits (80), Expect = 0.039 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + ++ CTEAGM+A+R RR VT++ +V KV+K Sbjct: 366 EIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMK 400
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 35.4 bits (80), Expect = 0.039 Identities = 18/45 (40%), Positives = 27/45 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT + F S V+ Y+K P+ Sbjct: 397 DIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL--YRKKEGAPE 439
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 35.0 bits (79), Expect = 0.051 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPK 123 D +++CTEAG+ A+R RR VT F + KV+ ++K P+ Sbjct: 402 DIKAICTEAGLLALRERRMKVTHADFKKAKEKVM--FKKKEGVPE 444
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 35.0 bits (79), Expect = 0.051 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN 108 D +++ TEAGM+A+R ++ V + FL++V KV + T K M SN Sbjct: 368 DLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV----SMAADTQKMMPSN 413
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/35 (42%), Positives = 24/35 (68%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D +++CTEAG+ A+R RR VT + F + +V+K Sbjct: 391 DIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMK 425
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D +++ TEAGM+A+R + V + FL++V KV Sbjct: 368 DLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 33.1 bits (74), Expect = 0.19 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + +++CTEAGM AIR R VT F +V K+++ Sbjct: 379 ELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIME 413
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 32.7 bits (73), Expect = 0.25 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSAT 129 D +++CTEAGM+AIR R V + F + K+ + + +AT Sbjct: 358 DVKAICTEAGMFAIRDDRTEVRMQDFQSAREKLDQDSEPAAAT 400
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 32.7 bits (73), Expect = 0.25 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = -3 Query: 248 SVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKY 120 S+ TEAGM+AIR R V + F D+ K++ S+ P+Y Sbjct: 364 SLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAEGDTESSGPRY 406
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D S+C E+GM A+R R V K F + VIK Sbjct: 374 DINSICQESGMLAVRENRYIVLAKDFEKAYKTVIK 408
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D S+C E+GM A+R R V K F + VIK Sbjct: 374 DINSICQESGMLAVRENRYIVLAKDFEKAYKTVIK 408
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 30.8 bits (68), Expect = 0.96 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 D ++VC EA AIR R VT ++++NK+ Sbjct: 343 DIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKI 375
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D S+C EAGM A+R R V K + V+K Sbjct: 370 DINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVK 404
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 + +S+C EAGM+AIR R + K F IK Sbjct: 359 EIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIK 393
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 179 GNXSPSQSSCGHGWRTCRLLC 241 G+ SP +SCGHG T R+LC Sbjct: 1210 GDWSPCSASCGHGKTTRRVLC 1230
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 + ++VCTEAG AIR RK V + ++ K+ Sbjct: 343 EIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKI 375
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRAR--RKTVTEKXFLDSV--------NKVIKGYQKFSATPKYMVS 111 D ++C EAGM A R +V++K FLD++ +VIK Y+ S T VS Sbjct: 674 DLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKSVS 732
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 251 RSVCTEAGMYAIRARRKTVTEKXFLDSVNKV 159 +SVC EAGM A+R + + F+D + +V Sbjct: 396 KSVCVEAGMIALRQGDTKINHEHFMDGILEV 426
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +2 Query: 182 NXSPSQSSCGHGWRTCRLLCRHSXC 256 N SP Q SC GWR ++ + C Sbjct: 3105 NSSPKQDSCQRGWRLLYIMAAYYSC 3129
>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1911 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 179 GNXSPSQSSCGHGWRTCRLLCRHSXCP 259 G+ SP +SCGHG T ++LC + P Sbjct: 1215 GDWSPCSASCGHGKTTRQVLCMNYHQP 1241
>YMF20_MARPO (P38463) Hypothetical 18.6 kDa protein in NAD3-NAD7 intergenic| region (ORF 167) Length = 167 Score = 28.5 bits (62), Expect = 4.8 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Frame = -2 Query: 156 QGVSEIQRNPEIHGVQLSKQASFC------FSACLHPYRSSSA 46 Q +EI R+PEIH LS++ C SACL SS+ Sbjct: 111 QDATEIMRDPEIHCPSLSEENKLCRENLNHISACLMKTPCSSS 153
>CYAA_TRYCO (Q26896) Receptor-type adenylate cyclase (EC 4.6.1.1) (ATP| pyrophosphate-lyase) (Adenylyl cyclase) (Fragment) Length = 745 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 108 IGHHVFRGCAEFLIPLDNLVDRVEEXLLRHSLPAGTD 218 IG V R AEF +PL+++ R++ L LPAG D Sbjct: 108 IGDAVRRTLAEFDVPLESVRTRMDGEALDGYLPAGGD 144
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKY 120 D R+ TEAG +AIR R + + +V KV + +K T +Y Sbjct: 390 DIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAE-VKKLEGTIEY 434
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 28.1 bits (61), Expect = 6.2 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 257 DXRSVCTEAGMYAIRARRKTVTEKXFLDSVNKVIK 153 D ++C EAGM A+R R V K F IK Sbjct: 371 DINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIK 405
>PFTB_PEA (Q04903) Protein farnesyltransferase beta subunit (EC 2.5.1.58)| (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta) Length = 419 Score = 27.7 bits (60), Expect = 8.1 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = -2 Query: 252 QECL-----HRSRHVRHPCPQEDCDGEXFPRLGQQGYQGVSE-IQRNPEIHGVQLSKQAS 91 +ECL H + H+RH E C + + GY +SE Q P H + L + Sbjct: 282 KECLDGTSSHATSHIRHEGMNESCSSD----VKNIGYNFISEWRQSEPLFHSIALQQYIL 337 Query: 90 FC 85 C Sbjct: 338 LC 339
>COAT_PHMV (P36351) Coat protein (Virion protein)| Length = 188 Score = 27.7 bits (60), Expect = 8.1 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = -3 Query: 203 KTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN*A----SRLPFVSVHV 72 KT+ LDSVN+++K ++ TPK + + A S++P S+ + Sbjct: 127 KTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQI 174
>TRPF_YEAST (P00912) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 224 Score = 27.7 bits (60), Expect = 8.1 Identities = 11/39 (28%), Positives = 23/39 (58%) Frame = -3 Query: 230 GMYAIRARRKTVTEKXFLDSVNKVIKGYQKFSATPKYMV 114 G+ + R++T+ + ++ ++K Y+ S TPKY+V Sbjct: 37 GIICVPNRKRTI-DPVIARKISSLVKAYKNSSGTPKYLV 74
>COAT_BMDV (P15158) Coat protein (Virion protein)| Length = 190 Score = 27.7 bits (60), Expect = 8.1 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = -3 Query: 203 KTVTEKXFLDSVNKVIKGYQKFSATPKYMVSN*A----SRLPFVSVHV 72 KT+ LDSVN+++K ++ TPK + + A S++P S+ + Sbjct: 129 KTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQI 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,030,753 Number of Sequences: 219361 Number of extensions: 592299 Number of successful extensions: 1749 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 1719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1749 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
