>RL36A_ARATH (O80929) 60S ribosomal protein L36-1|
          Length = 113

 Score =  167 bits (424), Expect = 9e-42
 Identities = 83/106 (78%), Positives = 92/106 (86%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           K+GLFVG+NKGHV+T+REL PRP+ RKGK +KR  F+R LIREVAG APYEKRITELLKV
Sbjct: 7   KTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKV 66

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSXXXXXXGDKK 146
           GKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS       +KK
Sbjct: 67  GKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

>RL36C_ARATH (Q9LZ57) 60S ribosomal protein L36-3|
          Length = 108

 Score =  166 bits (421), Expect = 2e-41
 Identities = 83/105 (79%), Positives = 92/105 (87%)
 Frame = -1

Query: 460 SGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVG 281
           +GLFVG+NKGHV+TKRE PPRP++RKGK +KR  F+RNLI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 280 KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSXXXXXXGDKK 146
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS        KK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108

>RL36B_ARATH (Q9M352) 60S ribosomal protein L36-2|
          Length = 112

 Score =  165 bits (417), Expect = 6e-41
 Identities = 83/106 (78%), Positives = 91/106 (85%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           K+GLFVG+NKGHV+T+REL PRP  RKGK +KR  F+RNLI+EVAG APYEKRITELLKV
Sbjct: 7   KTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKV 66

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSXXXXXXGDKK 146
           GKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS        KK
Sbjct: 67  GKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

>RL36_DAUCA (P52866) 60S ribosomal protein L36|
          Length = 106

 Score =  131 bits (329), Expect = 1e-30
 Identities = 63/84 (75%), Positives = 73/84 (86%)
 Frame = -1

Query: 460 SGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVG 281
           +GLFVG+NKGH++TK+EL PRPSDRKGK +KR HFVRNLIREVAGF PYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVG 67

Query: 280 KDKRALKVAKRKLGTHKRAKKKRE 209
           KDKRALKV + K+G H +  K+ E
Sbjct: 68  KDKRALKVRQEKVG-HSQESKEEE 90



 Score = 35.8 bits (81), Expect = 0.055
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 281 KGQACTQGRQEKAWYSQESKEEERGDVK 198
           K +   + RQEK  +SQESKEEERGDV+
Sbjct: 68  KDKRALKVRQEKVGHSQESKEEERGDVQ 95

>RL36_ENTCP (Q9LRB8) 60S ribosomal protein L36|
          Length = 101

 Score =  125 bits (315), Expect = 4e-29
 Identities = 62/91 (68%), Positives = 76/91 (83%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK+   PRPS RKG  ++RV  VR ++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRS 176
           ALK+ KRKLGTH R KKKREEM+ VLRKM++
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQA 96

>RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A|
          Length = 99

 Score =  119 bits (297), Expect = 5e-27
 Identities = 57/93 (61%), Positives = 77/93 (82%)
 Frame = -1

Query: 457 GLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGK 278
           GL VG+NKG V+TKR+LP RPS RKG+ +KR  FVR+++REVAGFAPYE+R+ EL++  +
Sbjct: 4   GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query: 277 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           DKRA K+AK++LGT KRAK K EE++SV++  R
Sbjct: 64  DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

>RL36B_SCHPO (O94658) 60S ribosomal protein L36-B|
          Length = 99

 Score =  116 bits (290), Expect = 3e-26
 Identities = 56/93 (60%), Positives = 75/93 (80%)
 Frame = -1

Query: 457 GLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGK 278
           GL VG+NKG  +TKR+LP RPS RKG  +KR  FVR+++REVAGFAPYE+R+ EL++  +
Sbjct: 4   GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query: 277 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           DKRA K+AK++LGT KRAK K EE++SV++  R
Sbjct: 64  DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96

>RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36|
          Length = 104

 Score =  116 bits (290), Expect = 3e-26
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK    PR S R+G+ TK   FVR++IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           ALK  K+++GTH RAK+KREE+S+VL  MR
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMR 97

>RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36|
          Length = 104

 Score =  116 bits (290), Expect = 3e-26
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK    PR S R+G+ TK   FVR++IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           ALK  K+++GTH RAK+KREE+S+VL  MR
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMR 97

>RL36_BOVIN (Q3T171) 60S ribosomal protein L36|
          Length = 104

 Score =  115 bits (288), Expect = 5e-26
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK    PR S R+G+ TK   FVR++IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           ALK  K+++GTH RAK+KREE+S+VL  MR
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMR 97

>RL36_RAT (P39032) 60S ribosomal protein L36|
          Length = 104

 Score =  114 bits (284), Expect = 2e-25
 Identities = 56/90 (62%), Positives = 69/90 (76%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK    PR S R+G+ TK   FVR++IREV  FAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKR 67

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           ALK  K+++GTH RAK+KREE+S+VL  MR
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMR 97

>RL36_MOUSE (P47964) 60S ribosomal protein L36|
          Length = 104

 Score =  107 bits (268), Expect = 1e-23
 Identities = 53/89 (59%), Positives = 66/89 (74%)
 Frame = -1

Query: 448 VGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKR 269
           VG+NKGH +TK    PR S R+ + T    FVR++IREV GFAPYE+R  ELLKV K KR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKR 67

Query: 268 ALKVAKRKLGTHKRAKKKREEMSSVLRKM 182
           ALK  K+++GTH RAK+KREE+S+VL  M
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAM 96

>RL36_CAEEL (P49181) 60S ribosomal protein L36|
          Length = 103

 Score =  105 bits (263), Expect = 4e-23
 Identities = 48/93 (51%), Positives = 67/93 (72%)
 Frame = -1

Query: 457 GLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGK 278
           GL VG+NKGH  T+  +  R +  KG  +K+   VR L+RE+ GFAPYE+R+ E+L++ K
Sbjct: 7   GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISK 66

Query: 277 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           DKRALK  KR++GTH+RAK KREE+ +V+   R
Sbjct: 67  DKRALKFLKRRIGTHRRAKGKREELQNVIIAQR 99

>RL36_TRIHM (Q9HFR7) 60S ribosomal protein L36 (TRP36)|
          Length = 105

 Score =  102 bits (255), Expect = 4e-22
 Identities = 51/95 (53%), Positives = 69/95 (72%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           K+GL VG+NKGH  T R + PR S  KG  +KR  FVR +++EVAG APYE+R+ ELL+ 
Sbjct: 8   KTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRN 67

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
            KDKRA K+AK++LGT  RAK+K +E+  V+ + R
Sbjct: 68  SKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102

>RL36_CANAL (P47834) 60S ribosomal protein L36 (L39)|
          Length = 99

 Score =  102 bits (254), Expect = 5e-22
 Identities = 48/95 (50%), Positives = 71/95 (74%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           KSG+  G+NKG   T +E+ P+ S RKG  ++R  FVR++++EVAG APYE+R+ EL++ 
Sbjct: 3   KSGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRN 62

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
             +KRA K+AK++LGTHKRA +K EEM+ V+ + R
Sbjct: 63  AGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESR 97

>RL36_DROME (P49630) 60S ribosomal protein L36 (Protein minute(1)1B)|
          Length = 115

 Score =  100 bits (248), Expect = 2e-21
 Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 10/102 (9%)
 Frame = -1

Query: 454 LFVGINKGHVITKRELPPRPSDRKGKG----------TKRVHFVRNLIREVAGFAPYEKR 305
           L +G+NKGH  +K        D+K KG          T+   F+R+L+REV G APYEKR
Sbjct: 7   LAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKR 66

Query: 304 ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
             ELLKV KDKRALK  KR+LGTH RAK+KREE+S++L ++R
Sbjct: 67  TMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLR 108

>RL36B_YEAST (O14455) 60S ribosomal protein L36-B (L39B) (YL39)|
          Length = 99

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 42/95 (44%), Positives = 68/95 (71%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           K+G+ +G+NKG  +T+    P+ S +KG  + R  FVR+L+RE+AG +PYE+R+ +L++ 
Sbjct: 3   KTGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRN 62

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
             +KRA KVAK++LG+  RAK K EEM++++   R
Sbjct: 63  SGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97

>RL36A_YEAST (P05745) 60S ribosomal protein L36-A (L39A) (YL39)|
          Length = 99

 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 42/95 (44%), Positives = 67/95 (70%)
 Frame = -1

Query: 463 KSGLFVGINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKV 284
           K+G+ +G+NKG  +T     P+ S +KG  + R  FVR+L+RE+AG +PYE+R+ +L++ 
Sbjct: 3   KTGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRN 62

Query: 283 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
             +KRA KVAK++LG+  RAK K EEM++++   R
Sbjct: 63  SGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97

>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 322 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS 200
           A Y K + + LK  K+KR  K+AKR+  +  RA + + E S
Sbjct: 207 AEYAKLLAKRLKEAKEKRQEKIAKRRRLSSLRASQSKSESS 247

>R1B16_SOLDE (Q6L400) Putative late blight resistance protein homolog R1B-16|
          Length = 1284

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +3

Query: 186  FLRTLDISSLFFFALL*VPSFLLATLSARLSFPTLRSSVMRFSYGANPATSLIKFLTKCT 365
            FL+ LD+        +    F L  LSAR+   ++ SS+       N  T ++K +++CT
Sbjct: 944  FLKVLDLEHQVVIDSIPTELFYLRYLSARIEQNSIPSSISNL---WNLETLILKHVSRCT 1000

Query: 366  LFVP 377
            + +P
Sbjct: 1001 VLLP 1004

>Y1220_SULTO (Q972A7) Hypothetical protein ST1220|
          Length = 163

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -1

Query: 298 ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 179
           E  +V   K  +K AKRK    KRA KK++  S   RK R
Sbjct: 122 EFSEVKPKKEKIKKAKRKKKGAKRASKKQKAKSKSARKSR 161

>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen|
           D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3)
           (Thyroid-associated ophthalmopathy autoantigen) (Smooth
           muscle leiomodin) (SM-Lmod)
          Length = 572

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
 Frame = -1

Query: 445 GINKGHVITKRELPPRPSDRKGKGTKRVHFVRNLIRE------VAGFAPYEKRI------ 302
           G  +G   +K+ L PR +   GK  KR    ++  R+       +G  P E++I      
Sbjct: 73  GQERGRDASKKALGPRRNSDLGKEPKRGGLKKSFSRDRDEAGGKSGEKPKEEKIIRGIDK 132

Query: 301 ------TELLKVGKD----KRALKVAK--------RKLGTHKRAKKKREEMSSVLRK 185
                  +  + GKD    +RA+   K        R  G  +   KKREEM  V +K
Sbjct: 133 GRVRAAVDKKEAGKDGRGEERAVATKKEEEKKGGDRNTGLSRDKDKKREEMKEVAKK 189

>MYO10_HUMAN (Q9HD67) Myosin-10 (Myosin X)|
          Length = 2058

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = -1

Query: 262 KVAKRKLGTHKRAKKKREEMSSVLRKMRSXXXXXXGDKKK*NFASRQFYRKTLSCPVLPI 83
           KV  R+    K  K++ EE+S     +R+             F +R+ YRK L C V+  
Sbjct: 723 KVFLRESLEQKLEKRREEEVSHAAMVIRAHVL---------GFLARKQYRKVLYCVVIIQ 773

Query: 82  GTYRAMAVVDCGTTKFVTLXKPAV 11
             YRA  +      +F+ L K A+
Sbjct: 774 KNYRAFLL----RRRFLHLKKAAI 793


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,105,497
Number of Sequences: 219361
Number of extensions: 918993
Number of successful extensions: 3133
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3130
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)