ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22o01 |
|---|---|
| Clone Library Name | barley_pub |
>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 365 Score = 61.2 bits (147), Expect = 7e-10 Identities = 27/31 (87%), Positives = 29/31 (93%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IMV LAA+DGI+W DYKKQLKKAEQWNVEVY Sbjct: 335 IMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365
>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 60.8 bits (146), Expect = 9e-10 Identities = 27/31 (87%), Positives = 28/31 (90%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IMV LAAKDGI+W DYKKQLKK EQWNVEVY Sbjct: 332 IMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362
>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 360 Score = 58.5 bits (140), Expect = 4e-09 Identities = 25/31 (80%), Positives = 29/31 (93%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IMV LAAKDGI+W++YK+ LKKAEQWNVEVY Sbjct: 330 IMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360
>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 369 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/31 (77%), Positives = 29/31 (93%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IMV LAA +GI+W++YK+QLKKAEQWNVEVY Sbjct: 339 IMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369
>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 54.7 bits (130), Expect = 6e-08 Identities = 25/31 (80%), Positives = 26/31 (83%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IM LA +DGI W DYKKQLKKAEQWNVEVY Sbjct: 332 IMSALAERDGIVWADYKKQLKKAEQWNVEVY 362
>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 53.9 bits (128), Expect = 1e-07 Identities = 22/31 (70%), Positives = 27/31 (87%) Frame = -2 Query: 219 IMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 IMV + KDGI+W++YK+ LKKAEQWNVEVY Sbjct: 333 IMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363
>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = -2 Query: 204 AAKDGINWLDYKKQLKKAEQWNVEVY 127 AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 415 AAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = -2 Query: 204 AAKDGINWLDYKKQLKKAEQWNVEVY 127 AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 415 AAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = -2 Query: 204 AAKDGINWLDYKKQLKKAEQWNVEVY 127 AAK+G+ W DY+K LKKA +W+VE Y Sbjct: 415 AAKEGVTWSDYQKDLKKAGRWHVETY 440
>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 294 Score = 35.8 bits (81), Expect = 0.031 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -2 Query: 204 AAKDGINWLDYKKQLKKAEQWNVEVY 127 A K ++W DY+K+LKK +W+VE Y Sbjct: 269 AGKFDVDWSDYQKELKKKHRWHVETY 294
>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 402 Score = 34.3 bits (77), Expect = 0.090 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -2 Query: 204 AAKDGINWLDYKKQLKKAEQWNVEVY 127 A K G+NW + ++ +KK +W+VEVY Sbjct: 377 AEKRGLNWEEMRRSMKKEHRWHVEVY 402
>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 377 Score = 32.3 bits (72), Expect = 0.34 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY 127 +A K G +W + QLKK +QW+VEVY Sbjct: 351 VAEKRGESWEEKLSQLKKNKQWHVEVY 377
>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 413 Score = 31.2 bits (69), Expect = 0.76 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY 127 LA ++G W +++++KK +W+VE Y Sbjct: 387 LAEQNGKEWTTFQREMKKEHRWHVETY 413
>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 216 MVDLAAKDGINWLDYKKQLKKAEQWNVEVY 127 M D+A +G W K LKK ++W+VE Y Sbjct: 334 MEDIAKANGTTWDAVVKGLKKEKRWHVETY 363
>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 375 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY 127 +A + G +W QLKK +QW+VEVY Sbjct: 349 VAERRGESWEQKLSQLKKNKQWHVEVY 375
>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY 127 +A + G +W QLKK +QW+VEVY Sbjct: 352 VAEQRGESWEQKLSQLKKNKQWHVEVY 378
>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY 127 +A + G +W QLKK +QW+VEVY Sbjct: 352 VAEQRGESWEQKLSQLKKNKQWHVEVY 378
>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 386 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -2 Query: 216 MVDLAAKDGINWLDYKK-QLKKAEQWNVEVY 127 M AAK+G +W ++ K LKK +W+VE Y Sbjct: 356 MTAAAAKNGADWQEFLKGTLKKEGRWHVETY 386
>Y013_NPVAC (P41423) Hypothetical 38.7 kDa protein in PK1-LEF1 intergenic| region Length = 327 Score = 29.3 bits (64), Expect = 2.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 207 LAAKDGINWLDYKKQLKKAEQWNVEVY*SSSSCHCH 100 +AA+D N DYKK A+QW+ V S C+ H Sbjct: 20 IAAEDRFNADDYKKYHINAQQWSHIVKWDSFKCNTH 55
>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 354 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = -2 Query: 216 MVDLAAKD-GINWLDYKKQLKKAEQWNVEVY 127 M++ AK+ G+N+ ++ + LK QW+VEVY Sbjct: 324 MLERVAKEKGLNYEEWVEGLKHKNQWHVEVY 354
>SRE27_CAEEL (O62488) Serpentine receptor class epsilon-27 (Protein sre-27)| Length = 364 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -1 Query: 133 GLLIIIIVSLP-WKDMHANVFPT*FSFLLQM 44 G+ + + S+P WK + N FP+ F FL+++ Sbjct: 298 GICTVAMYSIPAWKKRYKNAFPSIFCFLMRL 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,717,244 Number of Sequences: 219361 Number of extensions: 379065 Number of successful extensions: 847 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 847 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
