Clone Name | rbasd23c24 |
---|---|
Clone Library Name | barley_pub |
>HBD_BRAJA (Q45223) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 293 Score = 54.7 bits (130), Expect = 7e-08 Identities = 24/38 (63%), Positives = 31/38 (81%) Frame = -1 Query: 205 LDVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 LD CLS+++VLH GL D+K P PLLV+YV+AG LG+K Sbjct: 239 LDTCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK 276
>HBD_BACSU (P45856) Probable 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 287 Score = 54.3 bits (129), Expect = 9e-08 Identities = 25/38 (65%), Positives = 30/38 (78%) Frame = -1 Query: 205 LDVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 LD CLS++ VLH+GLGD+K P PLL +YV AG LGKK Sbjct: 237 LDTCLSIMEVLHSGLGDSKYRPCPLLRKYVKAGWLGKK 274
>HBD_DEIRA (Q9RVG1) Probable 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 278 Score = 50.1 bits (118), Expect = 2e-06 Identities = 22/38 (57%), Positives = 28/38 (73%) Frame = -1 Query: 205 LDVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 LD CL+++ VLH GLGD+K P PLL + V AG LG+K Sbjct: 233 LDTCLAIMEVLHQGLGDDKYRPSPLLRKMVQAGLLGRK 270
>HBD_CLOAB (P52041) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 282 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/38 (50%), Positives = 28/38 (73%) Frame = -1 Query: 205 LDVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 LD+CL+++ VL++ GD+K P LL +YV AG LG+K Sbjct: 235 LDICLAIMDVLYSETGDSKYRPHTLLKKYVRAGWLGRK 272
>HBD_CLODI (P45364) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 281 Score = 37.0 bits (84), Expect = 0.014 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -1 Query: 205 LDVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 LDV L+++ VL+ GD K + PLL + V A +LG+K Sbjct: 234 LDVVLAIMNVLYTEFGDTKYTAHPLLAKMVRANQLGRK 271
>HBD_CLOTS (P77851) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)| (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) Length = 289 Score = 36.6 bits (83), Expect = 0.018 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = -1 Query: 202 DVCLSVLRVLHNGLGDNKCSPXPLLVQYVDAGRLGKK 92 DV L+++ VL+ GD+K P PLL + V G LG+K Sbjct: 235 DVVLAIMNVLYEEYGDSKYRPHPLLKKVVRGGLLGRK 271
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 28.1 bits (61), Expect = 6.6 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -3 Query: 134 SSCPICRCRTTWKEARTR 81 S+CPICR R K++RTR Sbjct: 124 STCPICRKRVCLKQSRTR 141 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,856,102 Number of Sequences: 219361 Number of extensions: 325314 Number of successful extensions: 601 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 600 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 601 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)