ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31... 878 0.0
2ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA 202 8e-49
3ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA 202 8e-49
4ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group... 202 8e-49
5dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
6dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
7dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
8gb|AY108263.1| Zea mays PCO100700 mRNA sequence 168 1e-38
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
12dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
13dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 119 9e-24
14dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
15dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
16emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 113 5e-22
17gb|AY111861.1| Zea mays CL2457_1 mRNA sequence 113 5e-22
18gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 105 1e-19
19gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence 90 8e-15
20emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31... 80 7e-12
21emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMW... 76 1e-10
22dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds 62 2e-06
23emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribon... 60 7e-06
24emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonuc... 60 7e-06
25ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid... 50 0.007
26gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA bin... 50 0.007
27gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 ma... 50 0.007
28gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA bin... 50 0.007
29ref|XM_464698.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
30ref|XM_464699.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
33dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
35dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
36gb|AY107260.1| Zea mays PCO071008 mRNA sequence 42 1.6
37ref|XM_519003.1| PREDICTED: Pan troglodytes similar to HNRPA2B1 ... 40 6.5
38gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (T... 40 6.5
39gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, compl... 40 6.5
40gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosom... 40 6.5
41gb|BC000506.2| Homo sapiens heterogeneous nuclear ribonucleoprot... 40 6.5
42gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete se... 40 6.5
43emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chro... 40 6.5
44emb|CR858535.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1233 (from cl... 40 6.5
45emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
46gb|U09121.1|AH005377S2 Human hnRNP protein A2 gene, exons 2-7 40 6.5
47ref|NM_031243.1| Homo sapiens heterogeneous nuclear ribonucleopr... 40 6.5
48ref|NM_002137.2| Homo sapiens heterogeneous nuclear ribonucleopr... 40 6.5
49gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Ca... 40 6.5
50gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, compl... 40 6.5
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
52gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, com... 40 6.5
53gb|AF192348.1|AF192348 Saguinus oedipus vitamin D response eleme... 40 6.5
54dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
55dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56emb|BX641084.1|HSM806891 Homo sapiens mRNA; cDNA DKFZp686K0732 (... 40 6.5
57dbj|AK129839.1| Homo sapiens cDNA FLJ26329 fis, clone HRT02026, ... 40 6.5
58dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.5
59emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (... 40 6.5
60gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, compl... 40 6.5
61gb|AC157955.2| Gallus gallus BAC clone TAM31-4B17 from chromosom... 40 6.5
62gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromoso... 40 6.5
63emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chr... 40 6.5
64dbj|D28877.1|HUMHNRNP Homo sapiens HNRPA2B1 gene for hnRNP prote... 40 6.5
65gb|M29064.1|HUMRNPB1A Human hnRNP B1 protein mRNA 40 6.5
66gb|M29065.1|HUMRNPA2A Human hnRNP A2 protein mRNA 40 6.5
67gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding p... 40 6.5 
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein
          Length = 1139

 Score =  878 bits (443), Expect = 0.0
 Identities = 466/476 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaattaacatgattacaccagcagcgaacgaaagcatgnnnnnnntatgggatgggagga 60
            ||||||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 1106 aaattaacatgattacaccagcagcgaacgaaagcatgaaaaaaatatgggatgggagga 1047

                                                                        
Query: 61   gagccagcatcaggaggctaatgcgggagtttcaagtggtgacatgcttcagtcttctgc 120
            |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 gagccaccatcgggaggctaatgcgggagtttcaagtggtgacatgcttcagtcttctgc 987

                                                                        
Query: 121  agtaacatttcagcagtgttcccatgtgtccacgagaaacgccaagccatgctctccgcc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986  agtaacatttcagcagtgttcccatgtgtccacgagaaacgccaagccatgctctccgcc 927

                                                                        
Query: 181  gctgcgccgcatcagaaccctcgctgtggtctctctgctgcaacgttcactcggagtggg 240
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926  gctgcaccgcatcagaaccctcgctgtggtctctctgctgcaacgttcactcggagtggg 867

                                                                        
Query: 241  cggccatccatctcctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866  cggccatccatctcctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaa 807

                                                                        
Query: 301  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 747

                                                                        
Query: 361  gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746  gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 687

                                                                    
Query: 421  catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686  catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 631
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>ref|XM_483744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 540 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 481

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 480 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 421

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 420 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 361

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 360 taagccctgaaagcaggagcaaactg 335
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>ref|XM_483743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 981 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 922

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 921 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 862

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 861 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 802

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 801 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 742

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 741 taagccctgaaagcaggagcaaactg 716
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>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2
           mRNA
          Length = 1302

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 915 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 856

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 855 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 796

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 795 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 736

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 735 taagccctgaaagcaggagcaaactg 710
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>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full
           insert sequence
          Length = 1230

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 978 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 919

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 918 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 859

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 858 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 799

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 798 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 739

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 738 taagccctgaaagcaggagcaaactg 713
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>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full
           insert sequence
          Length = 927

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 540 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 481

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 480 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 421

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 420 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 361

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 360 taagccctgaaagcaggagcaaactg 335
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>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full
           insert sequence
          Length = 1302

 Score =  202 bits (102), Expect = 8e-49
 Identities = 225/266 (84%)
 Strand = Plus / Minus

                                                                       
Query: 199 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 258
           ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||  ||||||
Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916

                                                                       
Query: 259 ccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaaaacca 318
           |||||||| || |||||||||   || || |||||||| || ||||| |  |||||||||
Sbjct: 915 ccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaaaacca 856

                                                                       
Query: 319 aatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactacttcccca 378
           ||||| || |||||||||| |||||| || || || | || ||| ||||| || || |||
Sbjct: 855 aatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacctctcca 796

                                                                       
Query: 379 tgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttaccaaca 438
           ||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| ||||||
Sbjct: 795 tgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgccaaca 736

                                     
Query: 439 taagccctgaaagaagatgcaaactg 464
           ||||||||||||| ||  ||||||||
Sbjct: 735 taagccctgaaagcaggagcaaactg 710
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>gb|AY108263.1| Zea mays PCO100700 mRNA sequence
          Length = 891

 Score =  168 bits (85), Expect = 1e-38
 Identities = 220/265 (83%)
 Strand = Plus / Minus

                                                                       
Query: 187 ccgcatcagaaccctcgctgtggtctctctgctgcaacgttcactcggagtgggcggcca 246
           |||||||| || || | |||||| | |||||||||||| |||||||| || |||||||| 
Sbjct: 616 ccgcatcaaaagcccctctgtggccgctctgctgcaacattcactcgaagagggcggccg 557

                                                                       
Query: 247 tccatctcctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccata 306
           ||||  ||||||||||| || || |||||||||   |  || |||||||||||  |||| 
Sbjct: 556 tccaattcctgtccatctagggccgaaatagcatcattgagttcctcctttgacaccatt 497

                                                                       
Query: 307 gttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcatta 366
           | ||||||||| |||||||| || ||||||||||||||||| || || | | |||||| |
Sbjct: 496 gatacaaaaccgaatcctcgtgagcgcccagtttctctgtcgtagacaaccttagcatca 437

                                                                       
Query: 367 actacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggc 426
           || ||||| ||||||||||||||||  ||||||| ||||||||| ||  |||||||||||
Sbjct: 436 acaacttctccatgctcgctgaacaactgcaccagcctagagtcatcaacttgccatggc 377

                                    
Query: 427 aggttaccaacataagccctgaaag 451
           | ||| ||||||||||| |||||||
Sbjct: 376 aagttgccaacataagctctgaaag 352
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  149 bits (75), Expect = 1e-32
 Identities = 177/211 (83%)
 Strand = Plus / Plus

                                                                            
Query: 254      cctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaa 313
                ||||||||||||| || |||||||||   || || |||||||| || ||||| |  ||||
Sbjct: 27873548 cctgtccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaa 27873607

                                                                            
Query: 314      aaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactactt 373
                |||||||||| || |||||||||| |||||| || || || | || ||| ||||| || |
Sbjct: 27873608 aaccaaatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacct 27873667

                                                                            
Query: 374      ccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttac 433
                | |||||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| |
Sbjct: 27873668 ctccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgc 27873727

                                               
Query: 434      caacataagccctgaaagaagatgcaaactg 464
                |||||||||||||||||| ||  ||||||||
Sbjct: 27873728 caacataagccctgaaagcaggagcaaactg 27873758



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 199      cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 250
                ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||
Sbjct: 27873352 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 27873403
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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score =  149 bits (75), Expect = 1e-32
 Identities = 177/211 (83%)
 Strand = Plus / Plus

                                                                         
Query: 254   cctgtccatcaagcgctgaaatagcactgtcaagatcctcctttgaagccatagttacaa 313
             ||||||||||||| || |||||||||   || || |||||||| || ||||| |  ||||
Sbjct: 81626 cctgtccatcaagggcagaaatagcatcatcgagctcctccttggaggccatggaaacaa 81685

                                                                         
Query: 314   aaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactactt 373
             |||||||||| || |||||||||| |||||| || || || | || ||| ||||| || |
Sbjct: 81686 aaccaaatccccgagaacgcccagattctctatcgtagacaaccgaagcgttaaccacct 81745

                                                                         
Query: 374   ccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggttac 433
             | |||||||||||||||| ||||| || ||||||||| ||| |||||||||||||||| |
Sbjct: 81746 ctccatgctcgctgaacaattgcagcagcctagagtcatccacttgccatggcaggttgc 81805

                                            
Query: 434   caacataagccctgaaagaagatgcaaactg 464
             |||||||||||||||||| ||  ||||||||
Sbjct: 81806 caacataagccctgaaagcaggagcaaactg 81836



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 199   cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 250
             ||||||||||||| ||| ||||| || |||||||| ||||||||||||||||
Sbjct: 81430 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 81481
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  119 bits (60), Expect = 9e-24
 Identities = 147/176 (83%)
 Strand = Plus / Plus

                                                                            
Query: 301      gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
                ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 22204251 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 22204310

                                                                            
Query: 361      gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
                || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 22204311 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 22204370

                                                                        
Query: 421      catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
                || || || || || ||||||  |||||||||||   ||||||| || ||||||||
Sbjct: 22204371 caagggagattgcccacataaatcctgaaagaaggcccaaactgacggggaggtct 22204426
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>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score =  119 bits (60), Expect = 9e-24
 Identities = 147/176 (83%)
 Strand = Plus / Plus

                                                                         
Query: 301   gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
             ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 24149 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 24208

                                                                         
Query: 361   gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
             || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 24209 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 24268

                                                                     
Query: 421   catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
             || || || || || ||||||  |||||||||||   ||||||| || ||||||||
Sbjct: 24269 caagggagattgcccacataaatcctgaaagaaggcccaaactgacggggaggtct 24324
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>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0042B15
          Length = 157981

 Score =  119 bits (60), Expect = 9e-24
 Identities = 147/176 (83%)
 Strand = Plus / Plus

                                                                          
Query: 301    gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
              ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 125744 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 125803

                                                                          
Query: 361    gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
              || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 125804 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 125863

                                                                      
Query: 421    catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
              || || || || || ||||||  |||||||||||   ||||||| || ||||||||
Sbjct: 125864 caagggagattgcccacataaatcctgaaagaaggcccaaactgacggggaggtct 125919
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>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full
           insert sequence
          Length = 1196

 Score =  119 bits (60), Expect = 9e-24
 Identities = 147/176 (83%)
 Strand = Plus / Minus

                                                                       
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 883 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 824

                                                                       
Query: 361 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
           || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 823 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 764

                                                                   
Query: 421 catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
           || || || || || ||||||  |||||||||||   ||||||| || ||||||||
Sbjct: 763 caagggagattgcccacataaatcctgaaagaaggcccaaactgacggggaggtct 708
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>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full
           insert sequence
          Length = 1289

 Score =  119 bits (60), Expect = 9e-24
 Identities = 147/176 (83%)
 Strand = Plus / Minus

                                                                       
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |   | 
Sbjct: 884 gccattgttacaaaaccaaatcctcgtgaacgcccagtttctctgtcatacacaactctg 825

                                                                       
Query: 361 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
           || |  |||||||  ||||||||||||||||  || |||||||||||||| ||| |||||
Sbjct: 824 gcgtcgactactttgccatgctcgctgaacagctgtaccaacctagagtcatccacttgc 765

                                                                   
Query: 421 catggcaggttaccaacataagccctgaaagaagatgcaaactgtcgaggaggtct 476
           || || || || || ||||||  |||||||||||   ||||||| || ||||||||
Sbjct: 764 caagggagattgcccacataaatcctgaaagaaggcccaaactgacggggaggtct 709
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>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score =  113 bits (57), Expect = 5e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                        
Query: 301  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
            |||||||| |||||||||||||| ||||||||||||||||||| |||||| || |   | 
Sbjct: 2415 gccatagtaacaaaaccaaatccccgcgaacgcccagtttctcggtcatagacaactctg 2356

                                                                        
Query: 361  gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
            |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 2355 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 2296

                                 
Query: 421  catggcaggttaccaacataa 441
            || |||||||| |||||||||
Sbjct: 2295 caaggcaggttgccaacataa 2275
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>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence
          Length = 1273

 Score =  113 bits (57), Expect = 5e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                       
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
           |||||||| |||||||||||||| ||||||||||||||||||| |||||| || |   | 
Sbjct: 926 gccatagtaacaaaaccaaatccccgcgaacgcccagtttctcggtcatagacaactctg 867

                                                                       
Query: 361 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
           |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 866 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 807

                                
Query: 421 catggcaggttaccaacataa 441
           || |||||||| |||||||||
Sbjct: 806 caaggcaggttgccaacataa 786
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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score =  105 bits (53), Expect = 1e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                       
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
           |||||||| |||||||||||||| || |||||||||||||||| |||||| || |   | 
Sbjct: 926 gccatagtaacaaaaccaaatccccgtgaacgcccagtttctcggtcatagacaactctg 867

                                                                       
Query: 361 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
           |||| ||||||||  ||||||||||||||||  | |||||| ||||| || ||| |||||
Sbjct: 866 gcatcaactactttaccatgctcgctgaacaactccaccaatctagaatcatccacttgc 807

                                
Query: 421 catggcaggttaccaacataa 441
           || |||||||| |||||||||
Sbjct: 806 caaggcaggttgccaacataa 786
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>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgta 360
           |||||||| |||||||||||||| || |||| ||||||||||| |||||| || |   | 
Sbjct: 292 gccatagtaacaaaaccaaatccccgtgaacccccagtttctccgtcatagacaactctg 351

                                                                       
Query: 361 gcattaactacttccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgc 420
           |||| ||||||||  ||||||||||||||||    |||||| ||||| || ||| |||||
Sbjct: 352 gcatcaactactttaccatgctcgctgaacaaccccaccaatctagaatcatccacttgc 411

                                
Query: 421 catggcaggttaccaacataa 441
           || |||||||| |||||||||
Sbjct: 412 caaggcaggttgccaacataa 432
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>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein
          Length = 1318

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 313 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 372
           ||||| || ||||| || |||||||| |||||||| || |||| | | ||||  || |||
Sbjct: 924 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccttggcatcgaccact 865

                                                                       
Query: 373 tccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggtta 432
           |  ||||||||||||||||  | ||||||||||||||| ||| |||||||||||||||| 
Sbjct: 864 ttgccatgctcgctgaacagctccaccaacctagagtcgtccacttgccatggcaggttg 805

                   
Query: 433 ccaacata 440
           || |||||
Sbjct: 804 cccacata 797
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>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781
          Length = 350

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 331 cgcccagtttctctgtcatacacgatcgtagcattaactacttccccatgctcgctgaac 390
           |||||||| |||||||| || |||| | | ||||  || ||||  |||||||||||||||
Sbjct: 195 cgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctcgctgaac 254

                                                             
Query: 391 atttgcaccaacctagagtcttccgcttgccatggcaggttaccaacata 440
           |  | ||||||||||||||| ||| |||||||||||||||| || |||||
Sbjct: 255 agctccaccaacctagagtcgtccacttgccatggcaggttgcccacata 304
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>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds
          Length = 1161

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                       
Query: 313 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 372
           ||||||||||| || || |||||||| |||||||| || || | | | ||||  || |||
Sbjct: 799 aaaccaaatccccgtgagcgcccagtgtctctgtcgtagacaaccctggcatcgacaact 740

                                                                      
Query: 373 tccccatgctcgctgaacatttgcaccaacctagagtcttccgcttgccatggcaggtt 431
           |  || |||||||||||||  |  |||||||||||||| ||| ||||||||||||||||
Sbjct: 739 ttgccgtgctcgctgaacagctctaccaacctagagtcgtccacttgccatggcaggtt 681
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>emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribonucleoprotein
          Length = 5040

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 301  gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcata 350
            ||||| || ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3681 gccatcgtaacaaaaccaaaacctcgcgaccggccagtttctctgtcata 3632
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>emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonucleoprotein
          Length = 1201

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtcata 350
           ||||| || ||||||||||| |||||||| || |||||||||||||||||
Sbjct: 952 gccatcgtaacaaaaccaaaacctcgcgaccggccagtttctctgtcata 903
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>ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G35410
           mRNA, complete cds
          Length = 1100

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 298 gaagccatagttacaaaaccaaatcctcg 326
           |||||||||||||||||| ||||||||||
Sbjct: 444 gaagccatagttacaaaagcaaatcctcg 416
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>gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA binding protein
           precursor (At2g35410) mRNA, complete cds
          Length = 963

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 298 gaagccatagttacaaaaccaaatcctcg 326
           |||||||||||||||||| ||||||||||
Sbjct: 431 gaagccatagttacaaaagcaaatcctcg 403
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>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete
             sequence
          Length = 79881

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 298   gaagccatagttacaaaaccaaatcctcg 326
             |||||||||||||||||| ||||||||||
Sbjct: 49989 gaagccatagttacaaaagcaaatcctcg 50017
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>gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA binding protein
           precursor (At2g35410; T32F12.21) mRNA, complete cds
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 298 gaagccatagttacaaaaccaaatcctcg 326
           |||||||||||||||||| ||||||||||
Sbjct: 445 gaagccatagttacaaaagcaaatcctcg 417
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>ref|XM_464698.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 310 acaaaaccaaatcctcgcgaacgcccagt 338
           ||||||||||||||||  |||||||||||
Sbjct: 602 acaaaaccaaatcctctagaacgcccagt 574
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>ref|XM_464699.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1927

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 310 acaaaaccaaatcctcgcgaacgcccagt 338
           ||||||||||||||||  |||||||||||
Sbjct: 820 acaaaaccaaatcctctagaacgcccagt 792
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 310     acaaaaccaaatcctcgcgaacgcccagt 338
               ||||||||||||||||  |||||||||||
Sbjct: 6784888 acaaaaccaaatcctctagaacgcccagt 6784916



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 239      ggcggccatccatctcctgt 258
                ||||||||||||||||||||
Sbjct: 33700319 ggcggccatccatctcctgt 33700338
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>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0758B01
          Length = 159206

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 310  acaaaaccaaatcctcgcgaacgcccagt 338
            ||||||||||||||||  |||||||||||
Sbjct: 2614 acaaaaccaaatcctctagaacgcccagt 2642
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1131G07
          Length = 133992

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 310    acaaaaccaaatcctcgcgaacgcccagt 338
              ||||||||||||||||  |||||||||||
Sbjct: 105941 acaaaaccaaatcctctagaacgcccagt 105969
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>dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L11, full
            insert sequence
          Length = 2473

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 310  acaaaaccaaatcctcgcgaacgcccagt 338
            ||||||||||||||||  |||||||||||
Sbjct: 1593 acaaaaccaaatcctctagaacgcccagt 1565
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>dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A08, full
           insert sequence
          Length = 1926

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 310 acaaaaccaaatcctcgcgaacgcccagt 338
           ||||||||||||||||  |||||||||||
Sbjct: 819 acaaaaccaaatcctctagaacgcccagt 791
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>gb|AY107260.1| Zea mays PCO071008 mRNA sequence
          Length = 737

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 gccatgctctccgccgctgcg 186
           |||||||||||||||||||||
Sbjct: 62  gccatgctctccgccgctgcg 82
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>ref|XM_519003.1| PREDICTED: Pan troglodytes similar to HNRPA2B1 protein (LOC463299),
           mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 420 agttacaaaaccaaatcctc 401
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>gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (TC)X15, closest to
           marker R3324, genomic sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 239 ggcggccatccatctcctgt 258
           ||||||||||||||||||||
Sbjct: 66  ggcggccatccatctcctgt 85
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>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence
          Length = 191336

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    agttacaaaaccaaatcctc 325
              ||||||||||||||||||||
Sbjct: 174474 agttacaaaaccaaatcctc 174493
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>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     ggatgggaggagagccagcatcag 73
              |||||||||||||||||| |||||
Sbjct: 159538 ggatgggaggagagccagaatcag 159515
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>gb|BC000506.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1, mRNA
           (cDNA clone MGC:8493 IMAGE:2822109), complete cds
          Length = 1541

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 315 agttacaaaaccaaatcctc 296
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>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence
          Length = 125772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 298   gaagccatagttacaaaaccaaatcctc 325
             |||| |||||| ||||||||||||||||
Sbjct: 96119 gaagacatagtaacaaaaccaaatcctc 96092
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>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tcaggaggctaatgcgggag 89
             ||||||||||||||||||||
Sbjct: 27901 tcaggaggctaatgcgggag 27882
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>emb|CR858535.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1233 (from clone DKFZp469B1233)
          Length = 1735

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 375 agttacaaaaccaaatcctc 356
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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ctctccgccgctgcgccgca 191
             ||||||||||||||||||||
Sbjct: 58073 ctctccgccgctgcgccgca 58054
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>gb|U09121.1|AH005377S2 Human hnRNP protein A2 gene, exons 2-7
          Length = 2680

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 709 agttacaaaaccaaatcctc 690
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>ref|NM_031243.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1
           (HNRPA2B1), transcript variant B1, mRNA
          Length = 1780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 373 agttacaaaaccaaatcctc 354
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>ref|NM_002137.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1
           (HNRPA2B1), transcript variant A2, mRNA
          Length = 1714

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 337 agttacaaaaccaaatcctc 318
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>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC
             Library) complete sequence
          Length = 183586

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tcaggaggctaatgcgggag 89
             ||||||||||||||||||||
Sbjct: 18864 tcaggaggctaatgcgggag 18883
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>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence
          Length = 112659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  agttacaaaaccaaatcctc 325
            ||||||||||||||||||||
Sbjct: 5177 agttacaaaaccaaatcctc 5196
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      ctctccgccgctgcgccgca 191
                ||||||||||||||||||||
Sbjct: 27789403 ctctccgccgctgcgccgca 27789384
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>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence
          Length = 186281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gccatagttacaaaaccaaa 320
             ||||||||||||||||||||
Sbjct: 96150 gccatagttacaaaaccaaa 96169
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>gb|AF192348.1|AF192348 Saguinus oedipus vitamin D response element binding protein
           (VDRE-BP2) mRNA, complete cds
          Length = 1736

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 340 agttacaaaaccaaatcctc 321
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1249_F12
          Length = 133205

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ggcggccatccatctcctgt 258
             ||||||||||||||||||||
Sbjct: 68726 ggcggccatccatctcctgt 68745
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ggcggccatccatctcctgt 258
             ||||||||||||||||||||
Sbjct: 31186 ggcggccatccatctcctgt 31205
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>emb|BX641084.1|HSM806891 Homo sapiens mRNA; cDNA DKFZp686K0732 (from clone DKFZp686K0732)
          Length = 5331

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agttacaaaaccaaatcctc 325
            ||||||||||||||||||||
Sbjct: 3957 agttacaaaaccaaatcctc 3938
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>dbj|AK129839.1| Homo sapiens cDNA FLJ26329 fis, clone HRT02026, highly similar to
           Heterogeneous nuclear ribonucleoproteins A2/B1
          Length = 1704

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 338 agttacaaaaccaaatcctc 319
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>dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2589O24, complete
             sequence
          Length = 64281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tcttctgcagtaacatttca 132
             ||||||||||||||||||||
Sbjct: 59392 tcttctgcagtaacatttca 59373
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>emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (from clone DKFZp686G0349)
          Length = 6299

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agttacaaaaccaaatcctc 325
            ||||||||||||||||||||
Sbjct: 3217 agttacaaaaccaaatcctc 3198
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>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence
          Length = 168481

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     ggatgggaggagagccagcatcag 73
              |||||||||||||||||| |||||
Sbjct: 145026 ggatgggaggagagccagaatcag 145049
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>gb|AC157955.2| Gallus gallus BAC clone TAM31-4B17 from chromosome unknown, complete
             sequence
          Length = 181590

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aggagagccagcatcaggag 76
             ||||||||||||||||||||
Sbjct: 38930 aggagagccagcatcaggag 38911
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>gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromosome unknown, complete
              sequence
          Length = 180657

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aggagagccagcatcaggag 76
              ||||||||||||||||||||
Sbjct: 165604 aggagagccagcatcaggag 165585
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>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
              sequence
          Length = 146143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     tcaggaggctaatgcgggag 89
              ||||||||||||||||||||
Sbjct: 118302 tcaggaggctaatgcgggag 118321
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>dbj|D28877.1|HUMHNRNP Homo sapiens HNRPA2B1 gene for hnRNP protein A2 and B1, complete cds
          Length = 11390

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agttacaaaaccaaatcctc 325
            ||||||||||||||||||||
Sbjct: 5762 agttacaaaaccaaatcctc 5743
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>gb|M29064.1|HUMRNPB1A Human hnRNP B1 protein mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 353 agttacaaaaccaaatcctc 334
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>gb|M29065.1|HUMRNPA2A Human hnRNP A2 protein mRNA
          Length = 1700

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agttacaaaaccaaatcctc 325
           ||||||||||||||||||||
Sbjct: 323 agttacaaaaccaaatcctc 304
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>gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding protein mRNA, complete
           cds
          Length = 1264

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 301 gccatagttacaaaaccaaatcctcgcgaacgcccagtttctctgtca 348
           |||||||| |||||  |||| || || ||||| |||||||||||||||
Sbjct: 774 gccatagtgacaaaggcaaagccacgtgaacggccagtttctctgtca 727


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,646,952
Number of Sequences: 3902068
Number of extensions: 3646952
Number of successful extensions: 70178
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69978
Number of HSP's gapped (non-prelim): 194
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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