ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23c21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y1745_ARATH (P59278) Protein At1g51745 33 0.21

>Y1745_ARATH (P59278) Protein At1g51745|
          Length = 597

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 128 SXRESTNKNTVVQKIGRPTIACIPVRLVFSRINXALSFQVR 6
           S  +   K    +K     +ACIP+++VFSRIN  L    R
Sbjct: 544 SLPKKNGKKQTTEKAKETVVACIPLKVVFSRINEVLKGSAR 584


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.137    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,843,524
Number of Sequences: 219361
Number of extensions: 180043
Number of successful extensions: 355
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
to top