Clone Name | rbasd23c17 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SHP_RAT (P97947) Nuclear receptor 0B2 (Orphan nuclear receptor S... | 32 | 1.3 | 2 | DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... | 30 | 6.5 |
---|
>SHP_RAT (P97947) Nuclear receptor 0B2 (Orphan nuclear receptor SHP) (Small| heterodimer partner) Length = 260 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Frame = +1 Query: 49 FSLVFGPKDYHYLAKHSLKCSYQPGKSGIHVAC-LAGLVQ-----ICTSDQPYFPSQEKK 210 +SL GPK+Y YL L + P G+H +C +A L Q +C +P++P+ + + Sbjct: 160 WSLELGPKEYAYLKGTIL---FNPDVPGLHASCHIAHLQQEAHWALCEVLEPWYPASQGR 216 Query: 211 EYRYL 225 R L Sbjct: 217 LARIL 221
>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 337 Score = 30.0 bits (66), Expect = 6.5 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = -3 Query: 657 DFLADAHVAAYECPTAFGRYLCFNNVVCRPEDALQFAQMLAPSAPCY--PPRYSTVHFN- 487 D L +AH+ +E P A GRY+C ++ L A+ML P Y P + V N Sbjct: 232 DDLCNAHIYLFENPKAEGRYICSSHDCI----ILDLAKMLREKYPEYNIPTEFKGVDENL 287 Query: 486 E*VFISTKK 460 + V S+KK Sbjct: 288 KSVCFSSKK 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,127,817 Number of Sequences: 219361 Number of extensions: 1693421 Number of successful extensions: 3358 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3358 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)