>gb|AY954974.1| Triticum aestivum cultivar 99L2 RAPD marker OPO10a genomic sequence
          Length = 897

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 66/76 (86%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                       
Query: 265 gtttgggtcatccggacacaaaagctagcccaacgagatgacccaaacggacgcgcgcgt 324
           |||||||||||||||||||||||   ||||||||| |  ||||||||||||| |   |||
Sbjct: 691 gtttgggtcatccggacacaaaactcagcccaacggggcgacccaaacggacac-aacgt 633

                           
Query: 325 ccgcctgctgtccgtt 340
           ||||||||||||||||
Sbjct: 632 ccgcctgctgtccgtt 617

>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence
          Length = 177753

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 34    aaaaatgaataaatacaagtagatgg 59
             |||||||||||||| |||||||||||
Sbjct: 47439 aaaaatgaataaattcaagtagatgg 47414

>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence
          Length = 80374

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 134   tcctttccacgtatgactaatt 155
             ||||||||||||||||||||||
Sbjct: 67082 tcctttccacgtatgactaatt 67061

>gb|AY152830.1| Felis catus clone BAC 463h11 major histocompatiblity complex
            classical class II region, partial sequence
          Length = 141214

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   aaaaatgaataaatacaagta 54
            |||||||||||||||||||||
Sbjct: 1813 aaaaatgaataaatacaagta 1833

>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 255    cattttttccgtttgggtcat 275
              |||||||||||||||||||||
Sbjct: 126953 cattttttccgtttgggtcat 126933

>gb|AC152926.1| Tribolium castaneum  BAC T.cast_C1K1 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 130658

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   atccattttttccgtttggg 271
             ||||||||||||||||||||
Sbjct: 37818 atccattttttccgtttggg 37837

>gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome 12, complete sequence
          Length = 247201

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 209    acatatttcccatggaggaaatga 232
              ||||| ||||||||||||||||||
Sbjct: 113578 acataattcccatggaggaaatga 113601

>emb|Z69838.1|HSV1164A6 Human DNA sequence from clone GHc-1164A6 on chromosome X, complete
            sequence
          Length = 29952

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   cccggctcaatatcctacta 105
            ||||||||||||||||||||
Sbjct: 3963 cccggctcaatatcctacta 3982

>gb|AY043292.1| Tribolium castaneum strain GA-2 HOMC gene cluster, partial sequence
          Length = 110623

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  atccattttttccgtttggg 271
            ||||||||||||||||||||
Sbjct: 8224 atccattttttccgtttggg 8205

>gb|AY158535.1| HIV-1 strain 98ZA528 clone 6 from South Africa, complete genome
          Length = 8964

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  atggaggaaatgagagcaac 239
            ||||||||||||||||||||
Sbjct: 6902 atggaggaaatgagagcaac 6921

>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
             BACR48K02, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tctcttcccctacatatttc 217
             ||||||||||||||||||||
Sbjct: 81683 tctcttcccctacatatttc 81664

>gb|AC022968.9| Homo sapiens chromosome 18, clone RP11-421N8, complete sequence
          Length = 187277

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aaaaatgaataaatacaagt 53
              ||||||||||||||||||||
Sbjct: 100827 aaaaatgaataaatacaagt 100808

>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete
              sequence
          Length = 253771

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    tctcttcccctacatatttc 217
              ||||||||||||||||||||
Sbjct: 209308 tctcttcccctacatatttc 209289

>dbj|AP001122.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-744N12, complete
             sequence
          Length = 217393

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   aaaactgcacacttccctca 419
             ||||||||||||||||||||
Sbjct: 86183 aaaactgcacacttccctca 86164

>gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 map human ortholog p11.4,
              complete sequence
          Length = 159881

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 33     gaaaaatgaataaatacaagtaga 56
              |||||||||||||||||| |||||
Sbjct: 125219 gaaaaatgaataaatacaggtaga 125242

>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region
              DXS709-SRPX, complete sequence
          Length = 337101

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 33     gaaaaatgaataaatacaagtaga 56
              |||||||||||||||||| |||||
Sbjct: 275833 gaaaaatgaataaatacaggtaga 275856


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,091,260
Number of Sequences: 3902068
Number of extensions: 4091260
Number of successful extensions: 85202
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85167
Number of HSP's gapped (non-prelim): 34
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)