Clone Name | rbasd22n06 |
---|---|
Clone Library Name | barley_pub |
>APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 74.7 bits (182), Expect = 1e-13 Identities = 32/85 (37%), Positives = 53/85 (62%) Frame = -2 Query: 511 DTLTQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPED 332 + L + KSPI +I +VKTP L +LG +D RVP GL+Y ALK R V +++++P+ Sbjct: 646 NVLEEMLDKSPIKYIPQVKTPVLLMLGQEDRRVPFKQGLEYYHALKARNVPVRLLLYPKS 705 Query: 331 IHGLDKPQSDFESFLNIGVWFKKYM 257 H L + + + +SF+N +W ++ Sbjct: 706 THALSEVEVESDSFMNTVLWLHTHL 730
>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 74.7 bits (182), Expect = 1e-13 Identities = 31/81 (38%), Positives = 53/81 (65%) Frame = -2 Query: 499 QFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGL 320 + KSPI +I +VKTP L +LG +D RVP G++Y RALK R V +++++P+ H L Sbjct: 650 EMLDKSPIKYIPQVKTPVLLMLGQEDRRVPFKQGMEYYRALKARNVPVRLLLYPKSNHAL 709 Query: 319 DKPQSDFESFLNIGVWFKKYM 257 + +++ +SF+N +W ++ Sbjct: 710 SEVEAESDSFMNAVLWLHTHL 730
>ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) (Oxidized protein hydrolase) (OPH) (DNF15S2 protein) Length = 732 Score = 74.7 bits (182), Expect = 1e-13 Identities = 31/81 (38%), Positives = 53/81 (65%) Frame = -2 Query: 499 QFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGL 320 + KSPI +I +VKTP L +LG +D RVP G++Y RALK R V +++++P+ H L Sbjct: 650 EMLDKSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHAL 709 Query: 319 DKPQSDFESFLNIGVWFKKYM 257 + + + +SF+N +W + ++ Sbjct: 710 SEVEVESDSFMNAVLWLRTHL 730
>ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 69.3 bits (168), Expect = 6e-12 Identities = 29/72 (40%), Positives = 47/72 (65%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQ 308 KSPI + +VKTP L +LG +D RVP G++Y R LK R V +++++P+ H L + + Sbjct: 654 KSPIKYAPQVKTPLLLMLGQEDRRVPFKQGMEYYRVLKARNVPVRLLLYPKSTHALSEVE 713 Query: 307 SDFESFLNIGVW 272 + +SF+N +W Sbjct: 714 VESDSFMNAVLW 725
>YUXL_BACSU (P39839) Probable peptidase yuxL (EC 3.4.21.-)| Length = 657 Score = 52.4 bits (124), Expect = 7e-07 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = -2 Query: 499 QFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGL 320 + + +SP+ + + V+TP L L G +D R P+ Q ALK+ G +TK++ FP H L Sbjct: 574 KLWDRSPLKYAANVETPLLILHGERDDRCPIEQAEQLFIALKKMGKETKLVRFPNASHNL 633 Query: 319 DK---PQSDFESFLNIGVWFKKYM 257 + P+ + I WF +++ Sbjct: 634 SRTGHPRQRIKRLNYISSWFDQHL 657
>DPP5_ASPFU (O13479) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) Length = 721 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = -2 Query: 493 YQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDK 314 + S I + TP L + KD R+PV+ GL L+ERGV ++ + FP++ H + Sbjct: 620 WDPSAPERILQFATPMLVIHSDKDYRLPVAEGLSLFNVLQERGVPSRFLNFPDENHWVVN 679 Query: 313 PQSDFESFLNIGVWFKKY 260 P++ W KY Sbjct: 680 PENSLVWHQQALGWINKY 697
>DPP5_ASPOR (Q9Y8E3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Alanyl dipeptidyl peptidase) Length = 725 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/78 (30%), Positives = 37/78 (47%) Frame = -2 Query: 493 YQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDK 314 + S I K TP L + D R+PVS GL L+ERGV ++ + FP++ H + Sbjct: 623 WDPSAPERILKFSTPMLIIHSDLDYRLPVSEGLSLFNILQERGVPSRFLNFPDENHWVQN 682 Query: 313 PQSDFESFLNIGVWFKKY 260 ++ + W KY Sbjct: 683 KENSLVWHQQVLGWLNKY 700
>YL31_CAEEL (P34422) Hypothetical protein F44B9.1 in chromosome III| Length = 740 Score = 45.8 bits (107), Expect = 7e-05 Identities = 22/84 (26%), Positives = 45/84 (53%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQ 308 +SP+ +V P + + GA D RV + Q+ AL+++ + +++P++ HG+ KPQ Sbjct: 583 RSPLFFADRVTKPIMIIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQ 642 Query: 307 SDFESFLNIGVWFKKYMSK*TLGF 236 + E +I + ++ + T F Sbjct: 643 NSMEQHGHIETFLQQCLGGETQPF 666
>DPP5_TRISH (Q8J1L4) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri s 4) Length = 726 Score = 43.1 bits (100), Expect = 4e-04 Identities = 18/70 (25%), Positives = 37/70 (52%) Frame = -2 Query: 469 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 290 ++K TP L + D R+ V+ G+ L+E+G+ ++ + FP++ H + KP++ Sbjct: 626 VAKWSTPQLVIHNDSDFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWH 685 Query: 289 LNIGVWFKKY 260 + W K+ Sbjct: 686 QQVLGWINKW 695
>DPP5_ARTBE (Q8J1M3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri m 4) Length = 726 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/70 (25%), Positives = 37/70 (52%) Frame = -2 Query: 469 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 290 ++K TP L + D R+ V+ G+ L+E+G+ ++ + FP++ H + KP++ Sbjct: 626 VAKWSTPQLVIHNDFDFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWH 685 Query: 289 LNIGVWFKKY 260 + W K+ Sbjct: 686 QQVLGWINKW 695
>DPP5_TRIRU (Q9UW98) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri r 4) Length = 726 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/70 (27%), Positives = 37/70 (52%) Frame = -2 Query: 469 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 290 ++K TP L + D R+ V+ G+ L+E+GV ++ + FP++ H + KP++ Sbjct: 626 VAKWSTPQLVVHNDFDFRLSVAEGVGLFNVLQEKGVPSRFLNFPDETHWVTKPENSLVWH 685 Query: 289 LNIGVWFKKY 260 + W K+ Sbjct: 686 QQVLGWVNKW 695
>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 267 Score = 37.0 bits (84), Expect = 0.032 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -2 Query: 502 TQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHG 323 T F K P+ + P L L G KD +P + +AL+ D +IIV+PE H Sbjct: 168 TLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAEHIETMRQALRAANADAEIIVYPEAGHA 227 Query: 322 LD 317 + Sbjct: 228 FN 229
>XYNB_BUTFI (P26223) Endo-1,4-beta-xylanase B (EC 3.2.1.8) (Xylanase B)| (1,4-beta-D-xylan xylanohydrolase B) Length = 635 Score = 35.4 bits (80), Expect = 0.093 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -2 Query: 463 KVKTPTLFLLGAK-DLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFES 293 K TP F+ + D VPV N +A AL+E+ + VFP HGL +F S Sbjct: 559 KDNTPPCFIWQTEEDSVVPVENSYLFANALREKKIPFAHYVFPRGFHGLTVANDEFFS 616
>DLHH_ECOLI (P56262) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 271 Score = 33.5 bits (75), Expect = 0.35 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 317 K P+ + + P L L G +D +P + +AL+ +IIV+P+ H + Sbjct: 183 KQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADY 242 Query: 316 KPQ----SDFESFLNIGVWFKKYMSK*TL 242 +P S + + + WFK+Y K +L Sbjct: 243 RPSYHAASAEDGWQRMLEWFKQYGGKKSL 271
>DLHH_ECO57 (Q8X8L4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 271 Score = 32.7 bits (73), Expect = 0.60 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 317 K P+ + + P L L G D +P + +AL+ +IIV+P+ H + Sbjct: 183 KQPVDIATDLNAPVLGLYGGLDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADY 242 Query: 316 KPQ----SDFESFLNIGVWFKKYMSK*TL 242 +P S + + + WFK+Y K +L Sbjct: 243 RPSYHAASAEDGWQRMLEWFKQYGGKKSL 271
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 32.7 bits (73), Expect = 0.60 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 317 K+P+ + +K P L L G D +PV+ + A + G +V+PE H Sbjct: 206 KNPVDVAADLKAPVLGLYGGADQGIPVATIDRMKEACRAAGKTCDFVVYPEAGHAFHADY 265 Query: 316 ----KPQSDFESFLNIGVWFKKY 260 + + + + + WF++Y Sbjct: 266 RPSYRAEPAQDGWKRLQDWFRQY 288
>APEH_AERPE (Q9YBQ2) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 582 Score = 32.0 bits (71), Expect = 1.0 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 317 +SPI+H+ ++K P + D R P+ L+ L RG + + P+ H ++ Sbjct: 503 RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN 559
>COQ8_CAEEL (Q18486) Ubiquinone biosynthesis protein coq-8| Length = 755 Score = 30.8 bits (68), Expect = 2.3 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -2 Query: 487 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIH 326 KS I I +++T +LG + PVS+ + R LK GV ++++ PE IH Sbjct: 181 KSAIPAIGQIETLIQSILGVQG---PVSSVSRAPRKLKLEGVTDQVVLEPETIH 231
>CHEB_CLOAB (Q97GZ3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 345 Score = 30.8 bits (68), Expect = 2.3 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 463 KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVF 341 KV P + L D+ +PV NG++ +A+K +D IIVF Sbjct: 46 KVMKPDVITL---DIEMPVMNGIETLKAVKSLKIDIPIIVF 83
>USF_AQUPY (P46209) Protein usf| Length = 231 Score = 30.0 bits (66), Expect = 3.9 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 10/96 (10%) Frame = -2 Query: 511 DTLTQFYQKSPISHIS--KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFP 338 D FY I+ I +K P F+L KD V + A+ + + GVD K+ V+ Sbjct: 136 DASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEVIDIAKKVWKNGVDVKVKVYS 195 Query: 337 EDIHG-LDKPQSDF------ESFLNIGV-WFKKYMS 254 H L++ + D + N+ V +FK+Y++ Sbjct: 196 GVTHAFLNEKREDVYDPCRAQDAWNLTVAFFKEYLT 231
>PRP45_CANGA (Q6FIT9) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing| protein 45) Length = 414 Score = 29.6 bits (65), Expect = 5.1 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -1 Query: 386 KGFEGEGGRHQNYCLPRRYSWTRQATVRL*ELPQHRGLVQEVHEQINIG 240 +G EGGRHQN + + + A RL EL +G +EV E++ +G Sbjct: 277 RGSRFEGGRHQNKKIKKEEPPIKSAAERLKELAYAQG--REVSEKVILG 323
>NARL_SHIFL (P0AF31) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -2 Query: 451 PTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 317 P L LL DL +P NGL+ L+E+ + +I+VF H D Sbjct: 53 PDLILL---DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEED 94
>NARL_ECOLI (P0AF28) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -2 Query: 451 PTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 317 P L LL DL +P NGL+ L+E+ + +I+VF H D Sbjct: 53 PDLILL---DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEED 94
>NARL_ECOL6 (P0AF29) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -2 Query: 451 PTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 317 P L LL DL +P NGL+ L+E+ + +I+VF H D Sbjct: 53 PDLILL---DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEED 94
>NARL_ECO57 (P0AF30) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -2 Query: 451 PTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 317 P L LL DL +P NGL+ L+E+ + +I+VF H D Sbjct: 53 PDLILL---DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEED 94
>CIAR_STRR6 (P0A4H8) Transcriptional regulatory protein ciaR| Length = 224 Score = 29.3 bits (64), Expect = 6.7 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -2 Query: 424 DLRVPVSNGLQYARALKERGVDTKIIV 344 DL +P NG Q + L+E+G+ T +++ Sbjct: 51 DLMLPEKNGFQVLKELREKGITTPVLI 77
>CIAR_STRPN (P0A4H7) Transcriptional regulatory protein ciaR| Length = 224 Score = 29.3 bits (64), Expect = 6.7 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -2 Query: 424 DLRVPVSNGLQYARALKERGVDTKIIV 344 DL +P NG Q + L+E+G+ T +++ Sbjct: 51 DLMLPEKNGFQVLKELREKGITTPVLI 77
>DLHH_AQUAE (O67802) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 231 Score = 29.3 bits (64), Expect = 6.7 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -2 Query: 511 DTLTQFYQKSPISHIS--KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFP 338 D FY ++ I+ +K P F+L KD V + A+ + + GVD ++ VF Sbjct: 136 DASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEVIDIAKTVWKNGVDVQVKVFS 195 Query: 337 EDIH 326 H Sbjct: 196 GVTH 199
>VGNB_BPMV (Q9YJU5) Genome polyprotein B (RNA1 polyprotein) [Contains: Protease| cofactor (32 kDa protein); Putative helicase (EC 3.6.1.-) (NTP-binding protein) (NTB) (Membrane-binding protein) (58 kDa protein); Viral genome-linked protein (VPg); Picornain Length = 1850 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 8/36 (22%) Frame = +1 Query: 16 ALITSYIHYIGCNNI----LYII----LMREQYLHS 99 A + S +HY+ CNN+ Y++ ++RE YLHS Sbjct: 1601 ASLWSQLHYVSCNNLEMQEAYLVNLVNVLRELYLHS 1636
>PEPX_STRAW (Q82MI6) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)| (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 676 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = -2 Query: 511 DTLTQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKI 350 D + + ++ + SKV+ + G +DL V N Q+ AL + GV+ KI Sbjct: 301 DWTSLWTERDYVKDASKVRASVFLVHGMQDLNVRAKNFGQWWSALAKNGVERKI 354 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,000,278 Number of Sequences: 219361 Number of extensions: 1514232 Number of successful extensions: 3272 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3271 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)