ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22n06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018357.1| Zea mays clone EL01T0404A12.c mRNA sequence 281 1e-72
2dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
3ref|NM_196491.1| Oryza sativa (japonica cultivar-group) putative... 256 6e-65
4gb|AY105542.1| Zea mays PCO091746 mRNA sequence 188 1e-44
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
6gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 92 2e-15
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
8ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative... 54 5e-04
9dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
10dbj|AK061694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
11gb|AY110152.1| Zea mays CL9977_1 mRNA sequence 50 0.007
12emb|AL445984.6| Human DNA sequence from clone RP11-360A9 on chro... 44 0.45
13gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, com... 42 1.8
14emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, ... 42 1.8
15emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, B... 42 1.8
16gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map ... 42 1.8
17gb|AC006220.4| Arabidopsis thaliana chromosome 2 clone T20G20 ma... 42 1.8
18gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Ca... 42 1.8
19emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chro... 42 1.8
20ref|XM_633302.1| Dictyostelium discoideum hypothetical protein (... 40 7.0
21gb|AC005212.1| Homo sapiens chromosome 16, P1 clone 96-4B (LANL)... 40 7.0
22gb|BC062610.1| Homo sapiens E2F transcription factor 6, transcri... 40 7.0
23gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, co... 40 7.0
24gb|BC008348.1| Homo sapiens E2F transcription factor 6, transcri... 40 7.0
25ref|NM_212540.1| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
26ref|NM_198258.1| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
27ref|NM_198257.1| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
28ref|NM_198256.1| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
29ref|NM_001952.3| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
30ref|NM_198325.1| Homo sapiens E2F transcription factor 6 (E2F6),... 40 7.0
31gb|AY551344.1| Homo sapiens E2F6P1 (E2F6) pseudogene, partial se... 40 7.0
32gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosom... 40 7.0
33gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, co... 40 7.0
34ref|XM_734893.1| Plasmodium chabaudi chabaudi Pc-fam-5 (PC106523... 40 7.0
35gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosom... 40 7.0
36emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in ... 40 7.0
37ref|NM_148170.2| Homo sapiens cathepsin C (CTSC), transcript var... 40 7.0
38gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
39gb|AY083997.1| Homo sapiens E2F transcription factor (E2F6) gene... 40 7.0
40gb|AY083996.1| Homo sapiens E2F transcription factor 6 variant (... 40 7.0
41emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chr... 40 7.0
42emb|BX537913.1|HSM806022 Homo sapiens mRNA; cDNA DKFZp686N18114 ... 40 7.0
43emb|AJ493061.1|HSA493061 Homo sapiens E2F6 gene for transcriptio... 40 7.0
44emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in... 40 7.0
45emb|BX538216.1|HSM806447 Homo sapiens genomic DNA; cDNA DKFZp686... 40 7.0
46dbj|BS000616.1| Pan troglodytes chromosome Y clone:PTB-085B05, c... 40 7.0
47dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, c... 40 7.0
48gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103... 40 7.0
49gb|AC099676.2| Homo sapiens chromosome 1 clone RP11-465N4, compl... 40 7.0
50gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Ca... 40 7.0
51gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.0
52gb|AC093573.17| Pan troglodytes clone rp43-32j20, complete sequence 40 7.0
53emb|CR607422.1| full-length cDNA clone CS0DF026YA23 of Fetal bra... 40 7.0
54dbj|AK096197.1| Homo sapiens cDNA FLJ38878 fis, clone MESAN20153... 40 7.0
55gb|AC026731.6| Homo sapiens chromosome 5 clone CTD-2298B13, comp... 40 7.0
56gb|AC113166.1| Homo sapiens chromosome 5 clone RP11-302K24, comp... 40 7.0
57gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, comple... 40 7.0
58gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Can... 40 7.0
59gb|AC008132.35| Homo sapiens chromosome 22 clone pac995o6 map 22... 40 7.0
60gb|AC009288.15| Homo sapiens chromosome 22 clone p413m7 map 22q1... 40 7.0
61gb|AC023491.23| Homo sapiens chromosome 22 clone b659m11 map 22q... 40 7.0
62gb|AC007708.13| Homo sapiens chromosome 22 clone b563b9 map 22q1... 40 7.0
63gb|AC007325.51| Homo sapiens chromosome 22 clone b48 map 22q11, ... 40 7.0
64gb|AC007664.12| Homo sapiens chromosome 22 clone b453h4 map 22q1... 40 7.0
65gb|AC008018.20| Homo sapiens chromosome 22 clone b379n11 map 22q... 40 7.0
66gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G1... 40 7.0
67ref|NG_003106.1| Homo sapiens E2F transcription factor 6 pseudog... 40 7.0
68ref|NG_003105.1| Homo sapiens E2F transcription factor 6 pseudog... 40 7.0
69dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
70gb|AC092662.2| Homo sapiens BAC clone RP11-510H11 from 2, comple... 40 7.0
71dbj|AB110093.1| Epigonichthys maldivensis mitochondrial DNA, com... 40 7.0
72dbj|AK223407.1| Homo sapiens mRNA for E2F transcription factor 6... 40 7.0
73dbj|AK223159.1| Homo sapiens mRNA for E2F transcription factor 6... 40 7.0
74gb|AC098805.2| Homo sapiens chromosome 16 clone RP11-657D15, com... 40 7.0
75dbj|AB060895.1| Macaca fascicularis brain cDNA clone:QtrA-13642,... 40 7.0
76gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, com... 40 7.0
77gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complet... 40 7.0
78gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y,... 40 7.0
79emb|BX005196.15| Zebrafish DNA sequence from clone CH211-142M16 ... 40 7.0
80gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-29... 40 7.0
81emb|BX648806.1|HSM808957 Homo sapiens mRNA; cDNA DKFZp686E11190 ... 40 7.0
82dbj|AK129946.1| Homo sapiens cDNA FLJ26436 fis, clone KDN02020 40 7.0
83emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 i... 40 7.0
84emb|BX255922.4| Zebrafish DNA sequence from clone CH211-125A15 i... 40 7.0
85tpe|BN000001.1|HSA000001 TPA: TPA_exp: Homo sapiens TIM17A gene,... 40 7.0
86gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14... 40 7.0
87gb|AC007162.1|AC007162 Homo sapiens clone KLH7, complete sequence 40 7.0
88emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-1... 40 7.0
89gb|AF088059.1|HUMZD70C03 Homo sapiens full length insert cDNA cl... 40 7.0
90gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
91emb|AL844560.5| Mouse DNA sequence from clone RP23-334M9 on chro... 40 7.0
92emb|AL928791.10| Mouse DNA sequence from clone RP23-65N20 on chr... 40 7.0
93gb|AF041381.1|AF041381 Homo sapiens putative transcriptional rep... 40 7.0
94gb|BC107740.1| Homo sapiens E2F transcription factor 6, transcri... 40 7.0
95gb|AC147545.3| Mus musculus BAC clone RP23-355L20 from 14, compl... 40 7.0
96emb|AL133449.5|CNS01DV3 Human chromosome 14 DNA sequence BAC R-1... 40 7.0
97gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Can... 40 7.0
98dbj|AP000552.1| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 7.0
99dbj|AP000550.1| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 7.0 
>gb|BT018357.1| Zea mays clone EL01T0404A12.c mRNA sequence
          Length = 712

 Score =  281 bits (142), Expect = 1e-72
 Identities = 223/250 (89%)
 Strand = Plus / Minus

                                                                       
Query: 243 aatgtttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaag 302
           ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || || 
Sbjct: 482 aatgtttatttgcccatgtgcttcttgaaccaaacccctatgttgaggaagctttcgaaa 423

                                                                       
Query: 303 tcggactgtggcttgtctagtccatgaatatcttctgggaagacaataattttggtgtcg 362
           || ||||| |||||||| | |||||| ||||||||||||||||||||| |||| || |||
Sbjct: 422 tcagactgaggcttgtcaattccatggatatcttctgggaagacaatagttttcgtttcg 363

                                                                       
Query: 363 acccccctctccttcaaagcccttgcatactgtaggccattagaaacaggaacacggaga 422
           |  ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||
Sbjct: 362 attcccctctccttcaaagcccttgcgtactgcaggccattagaaacaggaactctgaga 303

                                                                       
Query: 423 tcttttgctccgagaagaaagagtgttggtgtcttaaccttggaaatatgtgatattggt 482
           ||||  ||||| ||||||||||||||||||||||| ||||| | ||||||||| ||||||
Sbjct: 302 tcttgcgctccaagaagaaagagtgttggtgtcttgacctttgcaatatgtgaaattggt 243

                     
Query: 483 gatttctggt 492
           || |||||||
Sbjct: 242 gacttctggt 233
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>dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L05, full
            insert sequence
          Length = 2875

 Score =  262 bits (132), Expect = 1e-66
 Identities = 219/248 (88%)
 Strand = Plus / Minus

                                                                        
Query: 245  tgtttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaagtc 304
            ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 2483 tgtttatttgctcatgtgcttcttgaaccaaacacctatattgaggaagctttcaaaatc 2424

                                                                        
Query: 305  ggactgtggcttgtctagtccatgaatatcttctgggaagacaataattttggtgtcgac 364
             |||||||||||||| || ||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 2423 agactgtggcttgtcaaggccatgcatatcttctggaaagacaataattttggtttcaac 2364

                                                                        
Query: 365  ccccctctccttcaaagcccttgcatactgtaggccattagaaacaggaacacggagatc 424
             ||| |||||||||| | |||||||||||||| |||||||||||||||||| | ||||||
Sbjct: 2363 tcccatctccttcaaggtccttgcatactgtaagccattagaaacaggaactctgagatc 2304

                                                                        
Query: 425  ttttgctccgagaagaaagagtgttggtgtcttaaccttggaaatatgtgatattggtga 484
            || |||||| || ||||| |||||||| ||  | ||||| || |||||||||||||||||
Sbjct: 2303 ttgtgctccaaggagaaaaagtgttggcgtgctcacctttgatatatgtgatattggtga 2244

                    
Query: 485  tttctggt 492
            ||||||||
Sbjct: 2243 tttctggt 2236
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>ref|NM_196491.1| Oryza sativa (japonica cultivar-group) putative
            acylaminoacyl-peptidase like protein (OSJNBa0032I20.4),
            mRNA
          Length = 2346

 Score =  256 bits (129), Expect = 6e-65
 Identities = 216/245 (88%)
 Strand = Plus / Minus

                                                                        
Query: 248  ttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaagtcgga 307
            |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| || ||
Sbjct: 2346 ttatttgctcatgtgcttcttgaaccaaacacctatattgaggaagctttcaaaatcaga 2287

                                                                        
Query: 308  ctgtggcttgtctagtccatgaatatcttctgggaagacaataattttggtgtcgacccc 367
            |||||||||||| || ||||| ||||||||||| ||||||||||||||||| || || ||
Sbjct: 2286 ctgtggcttgtcaaggccatgcatatcttctggaaagacaataattttggtttcaactcc 2227

                                                                        
Query: 368  cctctccttcaaagcccttgcatactgtaggccattagaaacaggaacacggagatcttt 427
            | |||||||||| | |||||||||||||| |||||||||||||||||| | |||||||| 
Sbjct: 2226 catctccttcaaggtccttgcatactgtaagccattagaaacaggaactctgagatcttg 2167

                                                                        
Query: 428  tgctccgagaagaaagagtgttggtgtcttaaccttggaaatatgtgatattggtgattt 487
            |||||| || ||||| |||||||| ||  | ||||| || ||||||||||||||||||||
Sbjct: 2166 tgctccaaggagaaaaagtgttggcgtgctcacctttgatatatgtgatattggtgattt 2107

                 
Query: 488  ctggt 492
            |||||
Sbjct: 2106 ctggt 2102
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>gb|AY105542.1| Zea mays PCO091746 mRNA sequence
          Length = 951

 Score =  188 bits (95), Expect = 1e-44
 Identities = 146/163 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330 atatcttctgggaagacaataattttggtgtcgacccccctctccttcaaagcccttgca 389
           ||||||||||||||||||||| |||| || ||||  ||||||||||||||||||||||| 
Sbjct: 950 atatcttctgggaagacaatagttttcgtttcgattcccctctccttcaaagcccttgcg 891

                                                                       
Query: 390 tactgtaggccattagaaacaggaacacggagatcttttgctccgagaagaaagagtgtt 449
           ||||| |||||||||||||||||||| | ||||||||  ||||| |||||||||||||||
Sbjct: 890 tactgcaggccattagaaacaggaactctgagatcttgcgctccaagaagaaagagtgtt 831

                                                      
Query: 450 ggtgtcttaaccttggaaatatgtgatattggtgatttctggt 492
           |||||||| ||||| | ||||||||| |||||||| |||||||
Sbjct: 830 ggtgtcttgacctttgcaatatgtgaaattggtgacttctggt 788
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                            
Query: 245      tgtttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaagtc 304
                ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 14028596 tgtttatttgctcatgtgcttcttgaaccaaacacctatattgaggaagctttcaaaatc 14028537

                          
Query: 305      ggactgtggc 314
                 |||||||||
Sbjct: 14028536 agactgtggc 14028527



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                            
Query: 314      cttgtctagtccatgaatatcttctgggaagacaataattttggtgtcgacccccctctc 373
                |||||| || ||||| ||||||||||| ||||||||||||||||| || || ||| ||||
Sbjct: 14028430 cttgtcaaggccatgcatatcttctggaaagacaataattttggtttcaactcccatctc 14028371

                                     
Query: 374      cttcaaagcccttgcatactg 394
                |||||| | ||||||||||||
Sbjct: 14028370 cttcaaggtccttgcatactg 14028350



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 392      ctgtaggccattagaaacaggaacacggagatcttttgctccgagaagaaagagtgttgg 451
                ||||| |||||||||||||||||| | |||||||| |||||| || ||||| ||||||||
Sbjct: 14028113 ctgtaagccattagaaacaggaactctgagatcttgtgctccaaggagaaaaagtgttgg 14028054



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 263      cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
                |||||||||||| || || ||||||||||||||||||||
Sbjct: 14034526 cttcttgaaccagacaccaatgttgaggaagctctcaaa 14034488



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 459      accttggaaatatgtgatattggtgatttctggt 492
                ||||| || |||||||||||||||||||||||||
Sbjct: 14027916 acctttgatatatgtgatattggtgatttctggt 14027883
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                         
Query: 245   tgtttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaagtc 304
             ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 44725 tgtttatttgctcatgtgcttcttgaaccaaacacctatattgaggaagctttcaaaatc 44666

                       
Query: 305   ggactgtggc 314
              |||||||||
Sbjct: 44665 agactgtggc 44656



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                         
Query: 314   cttgtctagtccatgaatatcttctgggaagacaataattttggtgtcgacccccctctc 373
             |||||| || ||||| ||||||||||| ||||||||||||||||| || || ||| ||||
Sbjct: 44559 cttgtcaaggccatgcatatcttctggaaagacaataattttggtttcaactcccatctc 44500

                                  
Query: 374   cttcaaagcccttgcatactg 394
             |||||| | ||||||||||||
Sbjct: 44499 cttcaaggtccttgcatactg 44479



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                         
Query: 392   ctgtaggccattagaaacaggaacacggagatcttttgctccgagaagaaagagtgttgg 451
             ||||| |||||||||||||||||| | |||||||| |||||| || ||||| ||||||||
Sbjct: 44242 ctgtaagccattagaaacaggaactctgagatcttgtgctccaaggagaaaaagtgttgg 44183



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 263   cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
             |||||||||||| || || ||||||||||||||||||||
Sbjct: 50655 cttcttgaaccagacaccaatgttgaggaagctctcaaa 50617



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 459   accttggaaatatgtgatattggtgatttctggt 492
             ||||| || |||||||||||||||||||||||||
Sbjct: 44045 acctttgatatatgtgatattggtgatttctggt 44012
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                            
Query: 245      tgtttatttgctcatgtacttcttgaaccaaacccctatgttgaggaagctctcaaagtc 304
                ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 14036838 tgtttatttgctcatgtgcttcttgaaccaaacacctatattgaggaagctttcaaaatc 14036779

                          
Query: 305      ggactgtggc 314
                 |||||||||
Sbjct: 14036778 agactgtggc 14036769



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                            
Query: 314      cttgtctagtccatgaatatcttctgggaagacaataattttggtgtcgacccccctctc 373
                |||||| || ||||| ||||||||||| ||||||||||||||||| || || ||| ||||
Sbjct: 14036672 cttgtcaaggccatgcatatcttctggaaagacaataattttggtttcaactcccatctc 14036613

                                     
Query: 374      cttcaaagcccttgcatactg 394
                |||||| | ||||||||||||
Sbjct: 14036612 cttcaaggtccttgcatactg 14036592



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 392      ctgtaggccattagaaacaggaacacggagatcttttgctccgagaagaaagagtgttgg 451
                ||||| |||||||||||||||||| | |||||||| |||||| || ||||| ||||||||
Sbjct: 14036355 ctgtaagccattagaaacaggaactctgagatcttgtgctccaaggagaaaaagtgttgg 14036296



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 263      cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
                |||||||||||| || || ||||||||||||||||||||
Sbjct: 14042768 cttcttgaaccagacaccaatgttgaggaagctctcaaa 14042730



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 459      accttggaaatatgtgatattggtgatttctggt 492
                ||||| || |||||||||||||||||||||||||
Sbjct: 14036158 acctttgatatatgtgatattggtgatttctggt 14036125
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>ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative
            acylaminoacyl-peptidase like protein (OSJNBa0032I20.5),
            mRNA
          Length = 2406

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 263  cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
            |||||||||||| || || ||||||||||||||||||||
Sbjct: 2370 cttcttgaaccagacaccaatgttgaggaagctctcaaa 2332



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 384  cttgcatactgtaggccattagaaa 408
            ||||| |||||||||||||||||||
Sbjct: 2249 cttgcgtactgtaggccattagaaa 2225
to top
>dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G13, full
            insert sequence
          Length = 2732

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 263  cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
            |||||||||||| || || ||||||||||||||||||||
Sbjct: 2422 cttcttgaaccagacaccaatgttgaggaagctctcaaa 2384



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 384  cttgcatactgtaggccattagaaa 408
            ||||| |||||||||||||||||||
Sbjct: 2301 cttgcgtactgtaggccattagaaa 2277
to top
>dbj|AK061694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C07, full
            insert sequence
          Length = 1252

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 263  cttcttgaaccaaacccctatgttgaggaagctctcaaa 301
            |||||||||||| || || ||||||||||||||||||||
Sbjct: 1049 cttcttgaaccagacaccaatgttgaggaagctctcaaa 1011



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 384 cttgcatactgtaggccattagaaa 408
           ||||| |||||||||||||||||||
Sbjct: 928 cttgcgtactgtaggccattagaaa 904
to top
>gb|AY110152.1| Zea mays CL9977_1 mRNA sequence
          Length = 551

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 264 ttcttgaaccaaacccctatgttgaggaagctctcaaagtcggac 308
           ||||||||||| ||||| |||||||||||||| || || ||||||
Sbjct: 283 ttcttgaaccataccccaatgttgaggaagctttcgaaatcggac 327



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 383 ccttgcatactgtaggccattagaaacagg 412
           |||||| |||||||||||||||||| ||||
Sbjct: 402 ccttgcgtactgtaggccattagaagcagg 431
to top
>emb|AL445984.6| Human DNA sequence from clone RP11-360A9 on chromosome 13 Contains a
            novel gene, complete sequence
          Length = 181419

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 31   tatatacattatattggctgta 52
            ||||||||||||||||||||||
Sbjct: 1748 tatatacattatattggctgta 1727
to top
>gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, complete sequence
          Length = 192990

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    aacatcatatatacattatat 44
             |||||||||||||||||||||
Sbjct: 65095 aacatcatatatacattatat 65075
to top
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69
          Length = 197655

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     atatatacattatattggctg 50
              |||||||||||||||||||||
Sbjct: 127100 atatatacattatattggctg 127120
to top
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone  F16A16 (ESSAII
             project)
          Length = 97155

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    atatatacattatattggctg 50
             |||||||||||||||||||||
Sbjct: 49967 atatatacattatattggctg 49947
to top
>gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map mi310, complete
             sequence
          Length = 78568

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 53    ataacatcttatacattatactaat 77
             |||| ||||||||||||||||||||
Sbjct: 72579 ataatatcttatacattatactaat 72603
to top
>gb|AC006220.4| Arabidopsis thaliana chromosome 2 clone T20G20 map m246, complete
           sequence
          Length = 110352

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  ataacatcttatacattatactaat 77
           |||| ||||||||||||||||||||
Sbjct: 422 ataatatcttatacattatactaat 446
to top
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 127018

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 235   agaagcccaatgtttatttgctcat 259
             ||||||||||||||| |||||||||
Sbjct: 32703 agaagcccaatgtttttttgctcat 32727
to top
>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete
             sequence
          Length = 199662

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   ggaagacaataattttggtgt 360
             |||||||||||||||||||||
Sbjct: 48346 ggaagacaataattttggtgt 48326
to top
>ref|XM_633302.1| Dictyostelium discoideum hypothetical protein (DDB0218638), partial
           mRNA
          Length = 2730

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 128 atttctaagagttgccggttgaacaata 155
           ||||||||||||||  ||||||||||||
Sbjct: 141 atttctaagagttgatggttgaacaata 114
to top
>gb|AC005212.1| Homo sapiens chromosome 16, P1 clone 96-4B (LANL), complete sequence
          Length = 79815

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gctccgagaagaaagagtgt 448
             ||||||||||||||||||||
Sbjct: 61554 gctccgagaagaaagagtgt 61573
to top
>gb|BC062610.1| Homo sapiens E2F transcription factor 6, transcript variant f, mRNA
            (cDNA clone IMAGE:5175652)
          Length = 2270

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1569 catatatacattattttggctgta 1546
to top
>gb|AC148934.2| Pan troglodytes BAC clone CH251-557M20 from Y, complete sequence
          Length = 169254

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tatttgctcatgtacttctt 268
             ||||||||||||||||||||
Sbjct: 87041 tatttgctcatgtacttctt 87060
to top
>gb|BC008348.1| Homo sapiens E2F transcription factor 6, transcript variant a, mRNA
            (cDNA clone MGC:15924 IMAGE:3535798), complete cds
          Length = 1826

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1635 catatatacattattttggctgta 1612
to top
>ref|NM_212540.1| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant f,
            mRNA
          Length = 2266

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1594 catatatacattattttggctgta 1571
to top
>ref|NM_198258.1| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant d,
            mRNA
          Length = 2546

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1874 catatatacattattttggctgta 1851
to top
>ref|NM_198257.1| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant e,
            mRNA
          Length = 2287

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1615 catatatacattattttggctgta 1592
to top
>ref|NM_198256.1| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant b,
            mRNA
          Length = 2413

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1741 catatatacattattttggctgta 1718
to top
>ref|NM_001952.3| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant a,
            mRNA
          Length = 2342

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1670 catatatacattattttggctgta 1647
to top
>ref|NM_198325.1| Homo sapiens E2F transcription factor 6 (E2F6), transcript variant c,
            mRNA
          Length = 2475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1803 catatatacattattttggctgta 1780
to top
>gb|AY551344.1| Homo sapiens E2F6P1 (E2F6) pseudogene, partial sequence
          Length = 2232

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1557 catatatacattattttggctgta 1534
to top
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence
          Length = 221930

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    caatgtttatttgctcatgt 261
              ||||||||||||||||||||
Sbjct: 127633 caatgtttatttgctcatgt 127614
to top
>gb|AC147151.2| Pan troglodytes BAC clone CH251-205A10 from Y, complete sequence
          Length = 174629

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    tatttgctcatgtacttctt 268
              ||||||||||||||||||||
Sbjct: 146747 tatttgctcatgtacttctt 146766
to top
>ref|XM_734893.1| Plasmodium chabaudi chabaudi Pc-fam-5 (PC106523.00.0) partial mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  tctaataacatcatatatac 37
           ||||||||||||||||||||
Sbjct: 540 tctaataacatcatatatac 521
to top
>gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosome 13, complete
             sequence
          Length = 193502

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    acatcatatatacattatat 44
             ||||||||||||||||||||
Sbjct: 58659 acatcatatatacattatat 58678
to top
>emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in linkage group 25,
             complete sequence
          Length = 219164

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ttcaaagcccttgcatactg 394
             ||||||||||||||||||||
Sbjct: 77580 ttcaaagcccttgcatactg 77561
to top
>ref|NM_148170.2| Homo sapiens cathepsin C (CTSC), transcript variant 2, mRNA
          Length = 6131

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  catgaatatcttctgggaag 344
            ||||||||||||||||||||
Sbjct: 4905 catgaatatcttctgggaag 4886
to top
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0016O23, complete sequence
          Length = 149400

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    tctaataacatcatatatacatta 41
             |||||||||||||||| |||||||
Sbjct: 10074 tctaataacatcatatttacatta 10051
to top
>gb|AY083997.1| Homo sapiens E2F transcription factor (E2F6) gene, complete cds,
             alternatively spliced
          Length = 21544

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 20930 catatatacattattttggctgta 20907
to top
>gb|AY083996.1| Homo sapiens E2F transcription factor 6 variant (E2F6) mRNA, complete
            cds, alternatively spliced
          Length = 2392

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1728 catatatacattattttggctgta 1705
to top
>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3
             Contains the 3' end of gene KIAA1761 (FLJ14743) and the
             ALX3 gene for aristaless-like homeobox 3, complete
             sequence
          Length = 91783

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   gagaagaaagagtgttggtgtctt 457
             ||||||||||||| ||||||||||
Sbjct: 12978 gagaagaaagagtcttggtgtctt 13001
to top
>emb|BX537913.1|HSM806022 Homo sapiens mRNA; cDNA DKFZp686N18114 (from clone DKFZp686N18114);
            complete cds
          Length = 6173

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  catgaatatcttctgggaag 344
            ||||||||||||||||||||
Sbjct: 4896 catgaatatcttctgggaag 4877
to top
>emb|AJ493061.1|HSA493061 Homo sapiens E2F6 gene for transcription factor E2F6, exons 1-8
          Length = 20900

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 20220 catatatacattattttggctgta 20197
to top
>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1,
              complete sequence
          Length = 199679

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    tgatttctggtaaaactgag 501
              ||||||||||||||||||||
Sbjct: 119587 tgatttctggtaaaactgag 119606
to top
>emb|BX538216.1|HSM806447 Homo sapiens genomic DNA; cDNA DKFZp686F18116 (from clone
            DKFZp686F18116)
          Length = 4344

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  catgaatatcttctgggaag 344
            ||||||||||||||||||||
Sbjct: 3087 catgaatatcttctgggaag 3068
to top
>dbj|BS000616.1| Pan troglodytes chromosome Y clone:PTB-085B05, complete sequences
          Length = 74459

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tatttgctcatgtacttctt 268
             ||||||||||||||||||||
Sbjct: 65988 tatttgctcatgtacttctt 65969
to top
>dbj|BS000581.1| Pan troglodytes chromosome Y clone:PTB-115D04, complete sequence
          Length = 190533

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tatttgctcatgtacttctt 268
             ||||||||||||||||||||
Sbjct: 24562 tatttgctcatgtacttctt 24543
to top
>gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103P23, complete sequence
          Length = 195574

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    acatcatatatacattatat 44
             ||||||||||||||||||||
Sbjct: 58526 acatcatatatacattatat 58545
to top
>gb|AC099676.2| Homo sapiens chromosome 1 clone RP11-465N4, complete sequence
          Length = 204679

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    aatgtttatttgctcatgta 262
              ||||||||||||||||||||
Sbjct: 103397 aatgtttatttgctcatgta 103416
to top
>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180064

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    ccctctccttcaaagccctt 386
              ||||||||||||||||||||
Sbjct: 113944 ccctctccttcaaagccctt 113963
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 249      tatttgctcatgtacttctt 268
                ||||||||||||||||||||
Sbjct: 21355386 tatttgctcatgtacttctt 21355405
to top
>gb|AC093573.17| Pan troglodytes clone rp43-32j20, complete sequence
          Length = 170502

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 78138 catatatacattattttggctgta 78115
to top
>emb|CR607422.1| full-length cDNA clone CS0DF026YA23 of Fetal brain of Homo sapiens
            (human)
          Length = 2234

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1634 catatatacattattttggctgta 1611
to top
>dbj|AK096197.1| Homo sapiens cDNA FLJ38878 fis, clone MESAN2015365, highly similar to
            TRANSCRIPTION FACTOR E2F6
          Length = 2227

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1582 catatatacattattttggctgta 1559
to top
>gb|AC026731.6| Homo sapiens chromosome 5 clone CTD-2298B13, complete sequence
          Length = 23633

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  ccctctccttcaaagccctt 386
            ||||||||||||||||||||
Sbjct: 8974 ccctctccttcaaagccctt 8993
to top
>gb|AC113166.1| Homo sapiens chromosome 5 clone RP11-302K24, complete sequence
          Length = 187279

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   tttctggtaaaactgagtaa 504
             ||||||||||||||||||||
Sbjct: 30136 tttctggtaaaactgagtaa 30155
to top
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence
          Length = 159838

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 429    gctccgagaagaaagagtgt 448
              ||||||||||||||||||||
Sbjct: 123866 gctccgagaagaaagagtgt 123885
to top
>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gagagatattatttctaaga 137
              ||||||||||||||||||||
Sbjct: 100304 gagagatattatttctaaga 100285
to top
>gb|AC008132.35| Homo sapiens chromosome 22 clone pac995o6 map 22q11, complete sequence
          Length = 145598

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     catatatacattatattggctgta 52
              |||||||||||||| |||||||||
Sbjct: 125411 catatatacattattttggctgta 125388
to top
>gb|AC009288.15| Homo sapiens chromosome 22 clone p413m7 map 22q11, complete sequence
          Length = 140876

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 40431 catatatacattattttggctgta 40408
to top
>gb|AC023491.23| Homo sapiens chromosome 22 clone b659m11 map 22q11, complete sequence
          Length = 150754

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 25998 catatatacattattttggctgta 26021
to top
>gb|AC007708.13| Homo sapiens chromosome 22 clone b563b9 map 22q11, complete sequence
          Length = 106650

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 42415 catatatacattattttggctgta 42392
to top
>gb|AC007325.51| Homo sapiens chromosome 22 clone b48 map 22q11, complete sequence
          Length = 165050

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 60851 catatatacattattttggctgta 60828
to top
>gb|AC007664.12| Homo sapiens chromosome 22 clone b453h4 map 22q11, complete sequence
          Length = 162470

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     catatatacattatattggctgta 52
              |||||||||||||| |||||||||
Sbjct: 139885 catatatacattattttggctgta 139908
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>gb|AC008018.20| Homo sapiens chromosome 22 clone b379n11 map 22q11, complete sequence
          Length = 180884

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 60852 catatatacattattttggctgta 60875
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>gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G16, complete sequence
          Length = 210532

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   tttctggtaaaactgagtaa 504
             ||||||||||||||||||||
Sbjct: 30425 tttctggtaaaactgagtaa 30406
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>ref|NG_003106.1| Homo sapiens E2F transcription factor 6 pseudogene (LOC386610) on
            chromosome 22
          Length = 2144

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1380 catatatacattattttggctgta 1357
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>ref|NG_003105.1| Homo sapiens E2F transcription factor 6 pseudogene (LOC376818) on
            chromosome 22
          Length = 2144

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1380 catatatacattattttggctgta 1357
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 18       tctaataacatcatatatacatta 41
                |||||||||||||||| |||||||
Sbjct: 23821259 tctaataacatcatatttacatta 23821236
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>gb|AC092662.2| Homo sapiens BAC clone RP11-510H11 from 2, complete sequence
          Length = 198230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   attggtgatttctggtaaaa 496
             ||||||||||||||||||||
Sbjct: 30828 attggtgatttctggtaaaa 30847
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>dbj|AB110093.1| Epigonichthys maldivensis mitochondrial DNA, complete genome
          Length = 14975

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  aagagagatattatttctaa 135
            ||||||||||||||||||||
Sbjct: 6473 aagagagatattatttctaa 6492
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>dbj|AK223407.1| Homo sapiens mRNA for E2F transcription factor 6 isoform 1 variant,
            clone: FCC108E05
          Length = 2309

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1655 catatatacattattttggctgta 1632
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>dbj|AK223159.1| Homo sapiens mRNA for E2F transcription factor 6 isoform 1 variant,
            clone: LNG10020
          Length = 2018

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1349 catatatacattattttggctgta 1326
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>gb|AC098805.2| Homo sapiens chromosome 16 clone RP11-657D15, complete sequence
          Length = 149061

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gctccgagaagaaagagtgt 448
             ||||||||||||||||||||
Sbjct: 78265 gctccgagaagaaagagtgt 78284
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>dbj|AB060895.1| Macaca fascicularis brain cDNA clone:QtrA-13642, similar to human E2F
            transcription factor 6 isoform 1(E2F6), NM_001952.2
          Length = 2319

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1647 catatatacattattttggctgta 1624
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>gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, complete sequence
          Length = 199759

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  gctccgagaagaaagagtgt 448
            ||||||||||||||||||||
Sbjct: 9486 gctccgagaagaaagagtgt 9505
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>gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complete sequence
          Length = 135598

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     catatatacattatattggctgta 52
              |||||||||||||| |||||||||
Sbjct: 113031 catatatacattattttggctgta 113054
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>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence
          Length = 205053

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tatttgctcatgtacttctt 268
             ||||||||||||||||||||
Sbjct: 31771 tatttgctcatgtacttctt 31790
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>emb|BX005196.15| Zebrafish DNA sequence from clone CH211-142M16 in linkage group 12,
              complete sequence
          Length = 187209

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    cagaatgaatgatagaagga 223
              ||||||||||||||||||||
Sbjct: 159228 cagaatgaatgatagaagga 159247
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>gb|AC011088.8|AC011088 Homo sapiens chromosome 11, clone RP11-292E14, complete sequence
          Length = 164991

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    catgaatatcttctgggaag 344
              ||||||||||||||||||||
Sbjct: 134653 catgaatatcttctgggaag 134672
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>emb|BX648806.1|HSM808957 Homo sapiens mRNA; cDNA DKFZp686E11190 (from clone DKFZp686E11190)
          Length = 2498

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  aatgtttatttgctcatgta 262
            ||||||||||||||||||||
Sbjct: 2455 aatgtttatttgctcatgta 2436
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>dbj|AK129946.1| Homo sapiens cDNA FLJ26436 fis, clone KDN02020
          Length = 1811

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 aatgtttatttgctcatgta 262
           ||||||||||||||||||||
Sbjct: 483 aatgtttatttgctcatgta 502
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>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4,
              complete sequence
          Length = 153499

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 25     acatcatatatacattatattggctgtaataa 56
              |||| ||||||||||||||||  |||||||||
Sbjct: 127343 acattatatatacattatattaactgtaataa 127374
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>emb|BX255922.4| Zebrafish DNA sequence from clone CH211-125A15 in linkage group 4,
             complete sequence
          Length = 155429

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 25    acatcatatatacattatattggctgtaataa 56
             |||| ||||||||||||||||  |||||||||
Sbjct: 24164 acattatatatacattatattaactgtaataa 24195
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>tpe|BN000001.1|HSA000001 TPA: TPA_exp: Homo sapiens TIM17A gene, RNPEP gene, ELF3 gene and L10
             gene (partial)
          Length = 64961

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   aatgtttatttgctcatgta 262
             ||||||||||||||||||||
Sbjct: 48306 aatgtttatttgctcatgta 48325
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>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence
          Length = 166998

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gctccgagaagaaagagtgt 448
             ||||||||||||||||||||
Sbjct: 71140 gctccgagaagaaagagtgt 71159
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>gb|AC007162.1|AC007162 Homo sapiens clone KLH7, complete sequence
          Length = 35749

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gctccgagaagaaagagtgt 448
             ||||||||||||||||||||
Sbjct: 16477 gctccgagaagaaagagtgt 16496
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>emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-106G3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172755

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    atgaatatcttctgggaaga 345
              ||||||||||||||||||||
Sbjct: 117854 atgaatatcttctgggaaga 117873
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>gb|AF088059.1|HUMZD70C03 Homo sapiens full length insert cDNA clone ZD70C03
          Length = 613

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  catatatacattatattggctgta 52
           |||||||||||||| |||||||||
Sbjct: 430 catatatacattattttggctgta 407
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 18       tctaataacatcatatatacatta 41
                |||||||||||||||| |||||||
Sbjct: 24132928 tctaataacatcatatttacatta 24132905
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>emb|AL844560.5| Mouse DNA sequence from clone RP23-334M9 on chromosome 2, complete
              sequence
          Length = 185066

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     acatcatatatacattatat 44
              ||||||||||||||||||||
Sbjct: 172758 acatcatatatacattatat 172739
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>emb|AL928791.10| Mouse DNA sequence from clone RP23-65N20 on chromosome 2, complete
             sequence
          Length = 210148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    acatcatatatacattatat 44
             ||||||||||||||||||||
Sbjct: 91286 acatcatatatacattatat 91305
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>gb|AF041381.1|AF041381 Homo sapiens putative transcriptional repressor E2F-6 mRNA, partial
            cds
          Length = 2027

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1363 catatatacattattttggctgta 1340
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>gb|BC107740.1| Homo sapiens E2F transcription factor 6, transcript variant a, mRNA
            (cDNA clone MGC:111545 IMAGE:6494695), complete cds
          Length = 2350

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 1593 catatatacattattttggctgta 1570
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>gb|AC147545.3| Mus musculus BAC clone RP23-355L20 from 14, complete sequence
          Length = 211446

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   caatgtttatttgctcatgt 261
             ||||||||||||||||||||
Sbjct: 11975 caatgtttatttgctcatgt 11994
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>emb|AL133449.5|CNS01DV3 Human chromosome 14 DNA sequence BAC R-111J13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   atgaatatcttctgggaaga 345
             ||||||||||||||||||||
Sbjct: 30641 atgaatatcttctgggaaga 30660
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>gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148811

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   cagaatgaatgatagaagga 223
             ||||||||||||||||||||
Sbjct: 33180 cagaatgaatgatagaagga 33161
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>dbj|AP000552.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
            clone:KB1183D5
          Length = 157086

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 29   catatatacattatattggctgta 52
            |||||||||||||| |||||||||
Sbjct: 9148 catatatacattattttggctgta 9125
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>dbj|AP000550.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
             clone:KB1592A4
          Length = 150724

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    catatatacattatattggctgta 52
             |||||||||||||| |||||||||
Sbjct: 42120 catatatacattattttggctgta 42143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,568,787
Number of Sequences: 3902068
Number of extensions: 5568787
Number of successful extensions: 108399
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108050
Number of HSP's gapped (non-prelim): 349
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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