>FUK_HUMAN (Q8N0W3) L-fucose kinase (EC 2.7.1.52) (Fucokinase)|
          Length = 1084

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 242 AGSPKTGLVTGNSCPLHGADPRSQLVEIRHPRVHVPPG 355
           AG   TGL T +S  LHG + R  +++  H R+H  PG
Sbjct: 397 AGCLVTGLDTAHSKALHGRELRDLVLQGHHTRLHGSPG 434

>R1AB_CVPPU (Q9IW06) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown
            protein 1; 3C-like
          Length = 6684

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 69   TWSNAMQCKYTTKERTNETRPGR---QGPRKHATTSGDA 176
            TW  ++ C+ TTK + NE  PG+   +  R  AT  G+A
Sbjct: 3738 TWPLSITCERTTKLQNNEIMPGKLKERAVRASATLDGEA 3776

>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -3

Query: 439 SLPAESGSPVARTKAPAPARSTSLQQDTSRGNVHPRMPDFDELAA 305
           SLP E GSPV  TK  A  R++   Q  S G    ++P  +  AA
Sbjct: 608 SLPLEKGSPVTTTK--ADPRASGKAQPQSGGKAETKLPGQEGAAA 650

>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular|
            protein of testis) (Proliferation potential-related
            protein) (Protein P2P-R)
          Length = 1790

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
 Frame = +1

Query: 100  PPKKERTKQGQAAKARESMQLPQEMLWFMLNMRSPSRDAAAVVQHGACWK-----PENRP 264
            PP+ + +  GQ +K RE   LP++      +  SP RD      H A ++      E +P
Sbjct: 1502 PPRGKESLSGQKSKLREERDLPKKGAESKKSNSSPPRDKKP-HDHKAPYETKRPCEETKP 1560

Query: 265  GDRQLMPSSWR*SAQPARRNPASSGARSP 351
             D+       + +A+ AR    SSG + P
Sbjct: 1561 VDKNSGKEREKHAAE-ARNGKESSGGKLP 1588

>ATS10_HUMAN (Q9H324) ADAMTS-10 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 10)
           (ADAM-TS 10) (ADAM-TS10) (Fragment)
          Length = 1077

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
 Frame = +1

Query: 70  HGATQCNASIPPKKERTKQGQAAKARESMQLPQEMLWFMLNMRSPSRDAAAVV------Q 231
           +GA    +  PP+++R   G  A++R   ++      F+LN+   SR  A  V      +
Sbjct: 24  NGALLAFSPPPPRRQRRGTGATAESRLFYKVASPSTHFLLNLTRSSRLLAGHVSVEYWTR 83

Query: 232 HGACWKPENRP 264
            G  W+   RP
Sbjct: 84  EGLAWQRAARP 94

>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1210

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
 Frame = -3

Query: 442 VSLPAESG-SPVARTKAPAP---ARSTSLQQDTS------RGNVHPRMPDFDELAARISA 293
           V++P   G +P A T APAP   ++    + DTS      RG+  PR P  D LA  I +
Sbjct: 546 VTIPRGDGVTPPAGTAAPAPPPLSQDVPGRADTSQPSARMRGHGEPRRPPCDPLADTIDS 605

Query: 292 MKRA*VACHQACFRASSTP 236
              +    +  C  A   P
Sbjct: 606 SGPSLTLPNGGCLSAVGLP 624


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,420,615
Number of Sequences: 219361
Number of extensions: 1386503
Number of successful extensions: 4490
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4486
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)