ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22n04 |
|---|---|
| Clone Library Name | barley_pub |
>TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA topoisomerase| IIbeta-binding protein 1) (TopBP1) Length = 1515 Score = 34.7 bits (78), Expect = 0.25 Identities = 29/117 (24%), Positives = 43/117 (36%) Frame = +1 Query: 250 K*FIWEMNSHFHLQLYMVAAISIFPSKGVQEYMLASSSILPSKGVHPASA*FNSSSDTKF 429 K +I S+ H Y A I++ G Q +L S + PA + D Sbjct: 432 KGYILPEESYIHTN-YQPAGIAVSDQPGNQTAVLDKSGSFSKSALVPAERLQQADEDLLA 490 Query: 430 DRGNSVHLFRKNV*YVYGYPAISPCDASSAISPCDASSAISPCEASSAETGDCSVFD 600 GN + P + PC S+ PCD S+ IS E + + C + D Sbjct: 491 QYGNDDSTMVEAKLSEALEPEVGPCPGSAHREPCDDSTHISVQEENKSSVSHCILDD 547
>RDRP_PVXCP (P22591) RNA replication protein (165 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1456 Score = 33.9 bits (76), Expect = 0.42 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQ--QRLDS 244 +P+ + LDH+ Q C S++S+A +++ INT NSS ++LDS Sbjct: 930 KPKVQIVLDHNTQVCSANVMYSALSRATDRIHFINTSANSSAFWEKLDS 978
>RDRP_PVXHB (Q07630) RNA replication protein (165 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1456 Score = 32.7 bits (73), Expect = 0.94 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQ--QRLDS 244 +P+ + LDH+ Q C +++S+A +++ INT NSS ++LDS Sbjct: 930 KPKVQIVLDHNTQVCSANVMYTALSRATDRIHFINTSANSSAFWEKLDS 978
>IRA1_YEAST (P18963) Inhibitory regulator protein IRA1| Length = 3092 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +2 Query: 95 VNNQPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQQRLDSGRNSS 259 VNN + H S+ + TN +SISK K +N N S + +G ++S Sbjct: 368 VNNDHHYHLHHSSSSSKTTNTNSPNSISKTSIKQSSVNASGNVSPSQFSTGNDAS 422
>RDRP_PVXX3 (P17779) RNA replication protein (165 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1456 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQ--QRLDS 244 +P+ + LDH+ Q C +++S+A +++ +NT NSS ++LDS Sbjct: 930 KPKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDS 978
>RDRP_PVX (P09395) RNA replication protein (165 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1456 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQ--QRLDS 244 +P+ + LDH+ Q C +++S+A +++ +NT NSS ++LDS Sbjct: 930 KPKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDS 978
>PDE5A_HUMAN (O76074) cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)| (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase) Length = 875 Score = 32.0 bits (71), Expect = 1.6 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 462 FSEKVHRIPSIKFGVAGGVKSCAC 391 F+E+VH IP K G+ G +SC+C Sbjct: 58 FAERVHTIPVCKEGIRGHTESCSC 81
>PDE5A_CANFA (O77746) cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)| (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase) Length = 865 Score = 32.0 bits (71), Expect = 1.6 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 462 FSEKVHRIPSIKFGVAGGVKSCAC 391 F+E+VH IP K G+ G +SC+C Sbjct: 48 FAERVHTIPVCKEGIRGHAESCSC 71
>PDE5A_BOVIN (Q28156) cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)| (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase) Length = 865 Score = 32.0 bits (71), Expect = 1.6 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 462 FSEKVHRIPSIKFGVAGGVKSCAC 391 F+E+VH IP K G+ G +SC+C Sbjct: 48 FAERVHTIPVCKEGIKGHTESCSC 71
>ODFP_PIG (Q29077) Outer dense fiber protein| Length = 262 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 11/48 (22%) Frame = +1 Query: 460 KNV*YVYG-----------YPAISPCDASSAISPCDASSAISPCEASS 570 K+V Y YG YP SPC+ + SPC+ + +PC S Sbjct: 184 KDVTYSYGLGSCVKIESPCYPCTSPCNPCNPCSPCNPCNPCNPCNPCS 231
>PDE5A_RAT (O54735) cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)| (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase) Length = 833 Score = 31.6 bits (70), Expect = 2.1 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 462 FSEKVHRIPSIKFGVAGGVKSCACRM 385 FSE+VH IP K G+ +SC+C + Sbjct: 16 FSERVHNIPVCKEGIRAHTESCSCSL 41
>ODFP_HUMAN (Q14990) Outer dense fiber protein| Length = 250 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 11/44 (25%) Frame = +1 Query: 460 KNV*YVYG-----------YPAISPCDASSAISPCDASSAISPC 558 K+V Y YG YP SPC S +PC+ S +PC Sbjct: 184 KDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCNPCNPCSPCNPC 227
>PDE5A_MOUSE (Q8CG03) cGMP-specific 3',5'-cyclic phosphodiesterase (EC 3.1.4.35)| (CGB-PDE) (cGMP-binding cGMP-specific phosphodiesterase) Length = 865 Score = 31.6 bits (70), Expect = 2.1 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 462 FSEKVHRIPSIKFGVAGGVKSCACRM 385 FSE+VH IP K G+ +SC+C + Sbjct: 48 FSERVHNIPVCKEGIRAHTESCSCSL 73
>C1QR1_RAT (Q9ET61) Complement component C1q receptor precursor (Complement| component 1, q subcomponent, receptor 1) (C1qRp) (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (Cell surface antigen AA4) Length = 643 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = +2 Query: 299 WWRQSLSS-LPRACRNTCLPRALSSHPRECILQAHDL---TPPATPNLIEGILCTFSEKM 466 W++ S SS + + C + L +L HP + + H+ TP A N IEG LC F+ K Sbjct: 127 WYKASKSSCISKRCVSLILDLSLKPHPSH-LPKWHESPCGTPDAPGNSIEGFLCKFNFK- 184 Query: 467 SDMCT 481 MC+ Sbjct: 185 -GMCS 188
>STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless| Length = 383 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +2 Query: 434 EGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQAIVL-SLT 601 +G +C M + T+ QQ H H QQ H H + + HHQ + L SLT Sbjct: 20 DGPMCPMMMMMMPVITSHQQ--HHGHDQQHQHQQQHDGYAYQSHHQHSSLLFLQSLT 74
>ODFP_BOVIN (Q29438) Outer dense fiber protein| Length = 262 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 11/48 (22%) Frame = +1 Query: 460 KNV*YVYG-----------YPAISPCDASSAISPCDASSAISPCEASS 570 K+V Y YG YP SPC+ + +PC S +PC S Sbjct: 184 KDVTYSYGLGSCVKIESPCYPCTSPCNPCNPCNPCSPCSPCNPCNPCS 231
>DPOL_HBVAW (P03158) DNA polymerase (EC 2.7.7.7)| Length = 481 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQQRLDSG--RNSSSGR*TH 277 +P H+DHS S++ KA + + +SS ++ SS+G + Sbjct: 253 EPSGSGHIDHSVNNSSSCLHQSAVRKAAYSHLSTSKRQSSSGHAVEFHCLAPSSAGSQSQ 312 Query: 278 IFICSCTWWRQSLSSLPRACRNTCL 352 + SC WW Q +S P C CL Sbjct: 313 GSVSSC-WWLQFRNSKP--CSEYCL 334
>ENV_FLVC6 (P21443) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 668 Score = 31.2 bits (69), Expect = 2.7 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +2 Query: 467 SDMCTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQAIVLSL 598 SD C T+ +P +T+H+ +H + P K + + L L Sbjct: 433 SDFCVLTELWPRITYHEPEYIYSHFENKPRFKRDPISLTVALML 476
>VATC_DROME (Q9V7N5) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C| subunit) (Vacuolar proton pump C subunit) Length = 714 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +2 Query: 413 PATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQ 580 P P+ + + C +++ + Q+ THHQ P HH H HHQL Q Sbjct: 98 PGPPD--DSMPCRHHQRIKHLSLRHQRKHQHTHHQNKPQHYHH----HHHHHQLPQ 147
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Frame = +2 Query: 488 QQFPHVTHHQQSP-----------HVTHHQQFPHVKHHQLKQAIVLSLTRRLQHVNRH 628 QQ PH+ HHQQ P ++T QQ+ +++ Q Q + ++ QH ++H Sbjct: 1525 QQHPHLPHHQQMPAPMHTMNPMMQNMTPQQQYLYMQQLQQHQQHQQYMQQQQQHHHQH 1582 Score = 30.0 bits (66), Expect = 6.1 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 Query: 509 HHQQSPHVTHHQQFPHVKH 565 H QQ PH+ HHQQ P H Sbjct: 1523 HMQQHPHLPHHQQMPAPMH 1541
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)| (Protein bifid) Length = 972 Score = 30.4 bits (67), Expect = 4.7 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = +2 Query: 482 ATQQFPHV-THHQQSPHVTHHQQFPHVKHHQ 571 A Q H HHQQ H +HHQQ +HHQ Sbjct: 920 AAQHHHHTQAHHQQQQHQSHHQQ----QHHQ 946
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +2 Query: 488 QQFPHVTHHQQS---PHVTHHQQFPHVKHHQLKQAIVLSLTRRLQ 613 Q PH HH S H HHQ PH H QA V T+++Q Sbjct: 309 QNHPH--HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQ 351
>C1QR1_MOUSE (O89103) Complement component C1q receptor precursor (Complement| component 1, q subcomponent, receptor 1) (C1qRp) (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (Cell surface antigen AA4) (Lymphocyte antigen 68) Length = 644 Score = 30.4 bits (67), Expect = 4.7 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = +2 Query: 299 WWRQSLSS-LPRACRNTCLPRALSSHPRECILQAHDL---TPPATPNLIEGILCTFSEK 463 W++ S SS + + C + L +L+ HP + + H+ TP A N IEG LC F+ K Sbjct: 127 WYKASKSSCIFKRCVSLILDLSLTPHPSH-LPKWHESPCGTPEAPGNSIEGFLCKFNFK 184
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 30.4 bits (67), Expect = 4.7 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 10/102 (9%) Frame = +2 Query: 326 PRACRNTCLPRALS--------SHPRECILQAHDLTPPATPNLIEGILCT--FSEKMSDM 475 PR TC+ +S +HP + +H L P + + GI C +EK++ Sbjct: 127 PRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVSDTHLRGITCLDHENEKVNMY 186 Query: 476 CTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQAIVLSLT 601 C + Q H H + + +LKQ + ++LT Sbjct: 187 CVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLT 228
>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating| surface antigen) Length = 612 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = +2 Query: 407 TPPATPNLIEGILCTFSEKMSDMC---TATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLK 577 TPP + + T ++ + T+ Q H H Q H +HQQ P + HHQ + Sbjct: 516 TPPPPSQALSNNVNTMNKNIVSSALGGTSFSQEQHSLHSNQHHH--NHQQHPLIHHHQYQ 573 Query: 578 Q 580 Q Sbjct: 574 Q 574
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +2 Query: 488 QQFPHVTHHQQS---PHVTHHQQFPHVKHHQLKQAIVLSLTRRLQ 613 Q PH HH S H HHQ PH H QA V T+++Q Sbjct: 154 QNHPH--HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQ 196
>VL2_HPV32 (P36757) Minor capsid protein L2| Length = 476 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = +3 Query: 147 VTEPIGPPVSPRLYTSFIRLIHLTTAPSNVSILGEIVHLGDELTFSFAAVHGGGNLYLPF 326 V EP GP + P + I T PS +S+L E + + HGG N+ Sbjct: 81 VAEP-GPAIRPPVVVDTIG----PTDPSVISLLEESAVIDSSIPVPTDTSHGGFNITSSA 135 Query: 327 QGRAGIHACLELYPP 371 G + A L++ PP Sbjct: 136 SGPSSTPAVLDISPP 150
>PDM1_DROME (P31368) Protein nubbin (Protein twain) (POU domain protein 1)| (PDM-1) (dPOU-19) (dOCT1) Length = 601 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 497 PHVTHHQQSPHVTHHQQFPHVKHHQLKQ 580 PH HH +PH H+ HHQ KQ Sbjct: 100 PHPAHHHHNPH-----HLNHLNHHQYKQ 122
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 464 MSDMCTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQAIVLSLTRRLQHVNRH 628 +SDM T P+ H+Q HH Q + HHQ +Q + ++ Q +H Sbjct: 387 VSDMHTLKDSSPYALTHEQLHQQQHHHQ-QQLHHHQQQQQQLYHQQQQQQQQQQH 440
>HNF6_RAT (P70512) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +2 Query: 407 TPPATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQ 547 TPP T + + + T + +FPH HH H HH Q Sbjct: 93 TPPGMSMPTTYTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQ 139
>HNF6_MOUSE (O08755) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +2 Query: 407 TPPATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQ 547 TPP T + + + T + +FPH HH H HH Q Sbjct: 93 TPPGMSMPTTYTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQ 139
>HNF6_HUMAN (Q9UBC0) Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family| member 1) Length = 465 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +2 Query: 407 TPPATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQ 547 TPP T + + + T + +FPH HH H HH Q Sbjct: 93 TPPGMSMPTTYTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQ 139
>DPOL_HBVW2 (P03159) P protein [Includes: DNA-directed DNA polymerase (EC| 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 845 Score = 29.6 bits (65), Expect = 8.0 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +2 Query: 104 QPQWETHLDHSAQQCDRTNWSSSISKALHKLYQINTPDNSSQQRLDSG--RNSSSGR*TH 277 +P H+DHS S++ KA + + +SS ++ +S+G + Sbjct: 260 EPSGSGHIDHSVNNSSSCLHQSAVRKAAYSHLSTSKRQSSSGHAVEFHCLPPNSAGSQSQ 319 Query: 278 IFICSCTWWRQSLSSLPRACRNTCL 352 + SC WW Q +S P C CL Sbjct: 320 GSVSSC-WWLQFRNSKP--CSEYCL 341
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 29.6 bits (65), Expect = 8.0 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 10/102 (9%) Frame = +2 Query: 326 PRACRNTCLPRALS--------SHPRECILQAHDLTPPATPNLIEGILCT--FSEKMSDM 475 PR TC+ +S +HP + +H L P + GI C +EK++ Sbjct: 127 PRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMY 186 Query: 476 CTATQQFPHVTHHQQSPHVTHHQQFPHVKHHQLKQAIVLSLT 601 C + Q H H + + +LKQ + ++LT Sbjct: 187 CVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLT 228
>ODFP_RAT (P21769) Outer dense fiber protein (Protein RT7) (RTS 5/1)| Length = 245 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 11/44 (25%) Frame = +1 Query: 460 KNV*YVYG-----------YPAISPCDASSAISPCDASSAISPC 558 K+V Y YG YP SPC+ + SPC PC Sbjct: 170 KDVTYSYGLGSCVKIESPCYPCTSPCNPCNPCSPCSPCGPCGPC 213
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +2 Query: 488 QQFPHVTHHQQ-SPHVTHHQQFPHVKHHQLKQAIVLSLTRRLQHVNRH 628 QQ HHQQ HHQQ +HHQ Q L QH ++H Sbjct: 151 QQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQ-----QHQHQH 193 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Frame = +2 Query: 386 ILQAHDLTPPATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSP-HVTHHQQFPHVK 562 ++ + + P P+ F ++ + QQ HHQQ HHQQ + Sbjct: 98 MVDQYQIHPNQNPHYNYQYQLMFMQQQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQ 157 Query: 563 HHQLKQ 580 HHQ Q Sbjct: 158 HHQQMQ 163
>FA7_PANTR (Q2F9P2) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 350 LPRALSSHPRECILQAHDLTPPATPNLIEGILCT-FSEKMSDMCTATQQFPHVTHHQQSP 526 +PR ++ ++C+ Q+ + +PN+ E + C +S+ D C PH TH++ + Sbjct: 362 VPRLMT---QDCLQQSRKVGD--SPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTW 416 Query: 527 HVT 535 ++T Sbjct: 417 YLT 419
>FA7_PANPA (Q2F9P4) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 350 LPRALSSHPRECILQAHDLTPPATPNLIEGILCT-FSEKMSDMCTATQQFPHVTHHQQSP 526 +PR ++ ++C+ Q+ + +PN+ E + C +S+ D C PH TH++ + Sbjct: 362 VPRLMT---QDCLQQSRKVGD--SPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTW 416 Query: 527 HVT 535 ++T Sbjct: 417 YLT 419
>FA7_HUMAN (P08709) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) (SPCA) (Proconvertin) (Eptacog alfa) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 350 LPRALSSHPRECILQAHDLTPPATPNLIEGILCT-FSEKMSDMCTATQQFPHVTHHQQSP 526 +PR ++ ++C+ Q+ + +PN+ E + C +S+ D C PH TH++ + Sbjct: 362 VPRLMT---QDCLQQSRKVGD--SPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTW 416 Query: 527 HVT 535 ++T Sbjct: 417 YLT 419
>FKH2_YEAST (P41813) Fork head protein homolog 2| Length = 862 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 368 SHPRECILQAHDLTPPATPNLIEGILCTFSEKMSDMCTATQQFPHVTHHQQSPHVTHHQQ 547 + P + LQ+H++ P+ N+IEG + K ++ + Q P V+H QS +Q Sbjct: 469 AQPPKRQLQSHNVLEPSNNNIIEGFVQHVPSK-GNLPASQQSQPPVSHQNQSQQPPPQEQ 527 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,167,603 Number of Sequences: 219361 Number of extensions: 2001412 Number of successful extensions: 6903 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 6032 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6732 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
