ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105970.1| Zea mays PCO109569 mRNA sequence 50 0.008
2ref|XM_464852.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.032
3ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.032
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
5gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, compl... 48 0.032
6dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
7dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
8dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
9dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
10gb|BT016700.1| Zea mays clone Contig533 mRNA sequence 44 0.49
11ref|XM_657747.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.49
12dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for ... 44 0.49
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
14dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
16emb|AL645602.14| Mouse DNA sequence from clone RP23-79E13 on chr... 44 0.49
17emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 44 0.49
18gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 42 2.0
19gb|AF321228.1| Xenopus laevis inv1 mRNA, complete cds 42 2.0
20gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 42 2.0
21gb|AF465262.1| Xenopus laevis inversin mRNA, partial cds 42 2.0
22gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D142... 42 2.0
23gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, com... 42 2.0
24gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, com... 40 7.7
25gb|AC099604.4| Mus musculus chromosome 1, clone RP23-335B22, com... 40 7.7
26gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, compl... 40 7.7
27gb|AC099413.3| Mus musculus BAC clone RP23-2O10 from 4, complete... 40 7.7
28emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chro... 40 7.7
29gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.7
30emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 40 7.7
31gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 40 7.7
32gb|AC010434.5|AC010434 Homo sapiens chromosome 5 clone CTD-2207B... 40 7.7
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
34gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 7.7
35gb|AC090806.12| Homo sapiens chromosome 8, clone RP11-94A24, com... 40 7.7
36gb|AC016656.5|AC016656 Homo sapiens chromosome 5 clone RPCI-1_4M... 40 7.7
37gb|AC010352.4|AC010352 Homo sapiens chromosome 5 clone CTD-2022F... 40 7.7
38emb|AL805956.22| Mouse DNA sequence from clone RP23-239F1 on chr... 40 7.7
39gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, co... 40 7.7
40dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.7
41dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.7
42emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chro... 40 7.7
43gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, comp... 40 7.7
44emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on ch... 40 7.7
45emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chro... 40 7.7
46dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.7 
>gb|AY105970.1| Zea mays PCO109569 mRNA sequence
          Length = 1186

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 537 ggagaagcgtcgggggacctggagcgggatcca 569
           |||||| |||||| |||||||||||||||||||
Sbjct: 967 ggagaatcgtcggcggacctggagcgggatcca 935
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>ref|XM_464852.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 521 ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 924 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 877
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>ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1113_G05.32
           mRNA
          Length = 1265

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 521 ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 923 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 876
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 521     ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
               |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 8553300 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 8553347
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>gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, complete cds
          Length = 1190

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 521 ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 924 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 877
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0009N02
          Length = 121142

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 521   ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
             |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 22623 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 22670
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>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1113_G05
          Length = 131445

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 521    ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
              |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 102570 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 102617
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>dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F04, full
           insert sequence
          Length = 1177

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 521 ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 924 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 877
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>dbj|AK062577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D09, full
           insert sequence
          Length = 1265

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 521 ttagtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           |||||| |||||||| |||||  ||||||  |||||||||||||||||
Sbjct: 923 ttagtcactgcgggcaggagacccgtcggcagacctggagcgggatcc 876
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>gb|BT016700.1| Zea mays clone Contig533 mRNA sequence
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 544 cgtcgggggacctggagcgggatcca 569
           |||||| |||||||||||||||||||
Sbjct: 829 cgtcggcggacctggagcgggatcca 804
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>ref|XM_657747.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5235.2), mRNA
          Length = 1410

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggttccaacagcaacaagcag 398
           ||||||||||||||||||||||
Sbjct: 544 aggttccaacagcaacaagcag 523
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>dbj|AB110200.1| Oryza sativa (japonica cultivar-group) mRNA for pre-mRNA splicing
           factor, partial cds, clone: pNS-C4A21
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 523 agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 699 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 654
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 523      agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
                ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 23623663 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 23623708



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 523      agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
                ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 23618157 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 23618202
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>dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034H02, full
           insert sequence
          Length = 1250

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 523 agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
           ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 876 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 831
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 523      agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
                ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 23551854 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 23551899



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 523      agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
                ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 23546348 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 23546393
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>emb|AL645602.14| Mouse DNA sequence from clone RP23-79E13 on chromosome 11, complete
             sequence
          Length = 240483

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 328   catacacatggtacatagatat 349
             ||||||||||||||||||||||
Sbjct: 87239 catacacatggtacatagatat 87260
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>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 523   agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
             ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 88253 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 88208



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 523   agtcgctgcgggcgggagaagcgtcgggggacctggagcgggatcc 568
             ||||||||||||| || ||| | |||| |||||| |||||||||||
Sbjct: 82747 agtcgctgcgggcaggggaaacatcggcggacctagagcgggatcc 82702
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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 256354

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   atgctacagtccttaaggttc 382
             |||||||||||||||||||||
Sbjct: 67793 atgctacagtccttaaggttc 67773
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>gb|AF321228.1| Xenopus laevis inv1 mRNA, complete cds
          Length = 3317

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 212  gctgcatgcagagcagttcatccat 236
            ||||||||||||||||||| |||||
Sbjct: 1202 gctgcatgcagagcagttcctccat 1178
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237247

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   atgctacagtccttaaggttc 382
             |||||||||||||||||||||
Sbjct: 45973 atgctacagtccttaaggttc 45993
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>gb|AF465262.1| Xenopus laevis inversin mRNA, partial cds
          Length = 2080

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 212  gctgcatgcagagcagttcatccat 236
            ||||||||||||||||||| |||||
Sbjct: 1199 gctgcatgcagagcagttcctccat 1175
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>gb|AY190949.1| Drosophila pseudoobscura clone DPSF01_8_J08 (D1424) genomic sequence
          Length = 42117

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   aaaggcttttctccaaataaa 299
             |||||||||||||||||||||
Sbjct: 19722 aaaggcttttctccaaataaa 19742
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>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence
          Length = 194339

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 328    catacacatggtacatagata 348
              |||||||||||||||||||||
Sbjct: 177714 catacacatggtacatagata 177694
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>gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, complete sequence
          Length = 149930

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ccatacacatggtacataga 346
             ||||||||||||||||||||
Sbjct: 71690 ccatacacatggtacataga 71709
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>gb|AC099604.4| Mus musculus chromosome 1, clone RP23-335B22, complete sequence
          Length = 197338

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   tatcaggtcccagataaaag 133
             ||||||||||||||||||||
Sbjct: 19729 tatcaggtcccagataaaag 19710
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>gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, complete sequence
          Length = 211410

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   cactccatacacatggtacataga 346
             |||| |||||||||||||||||||
Sbjct: 23381 cactacatacacatggtacataga 23404
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>gb|AC099413.3| Mus musculus BAC clone RP23-2O10 from 4, complete sequence
          Length = 208798

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctgctgcatgcagagcagtt 229
             ||||||||||||||||||||
Sbjct: 21071 ctgctgcatgcagagcagtt 21052
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>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the
             5' end of the SLICK gene for a sodium- and
             chloride-activated ATP-sensitive potassium channel,
             complete sequence
          Length = 185560

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 290   tccaaataaagtacatggaaattg 313
             |||||||||| |||||||||||||
Sbjct: 94190 tccaaataaattacatggaaattg 94167
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     cccagataaaagctcaaagg 141
               ||||||||||||||||||||
Sbjct: 4222913 cccagataaaagctcaaagg 4222932
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>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
             complete sequence
          Length = 166475

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   aacagcaacaagcaggagca 403
             ||||||||||||||||||||
Sbjct: 77734 aacagcaacaagcaggagca 77753
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>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atgtatacaaaagttaaaca 20
             ||||||||||||||||||||
Sbjct: 51562 atgtatacaaaagttaaaca 51543



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atgtatacaaaagttaaaca 20
             ||||||||||||||||||||
Sbjct: 39984 atgtatacaaaagttaaaca 39965



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atgtatacaaaagttaaaca 20
             ||||||||||||||||||||
Sbjct: 37775 atgtatacaaaagttaaaca 37756
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>gb|AC010434.5|AC010434 Homo sapiens chromosome 5 clone CTD-2207B17, complete sequence
          Length = 107465

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 467   gaatggaagtagctagatggagat 490
             |||||||||| |||||||||||||
Sbjct: 32350 gaatggaagttgctagatggagat 32373
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     aacagcaacaagcaggagca 403
               ||||||||||||||||||||
Sbjct: 7056543 aacagcaacaagcaggagca 7056562
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    aagggcaactgatggcaccagcag 161
              |||||||||||||| |||||||||
Sbjct: 144961 aagggcaactgatgtcaccagcag 144938
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>gb|AC090806.12| Homo sapiens chromosome 8, clone RP11-94A24, complete sequence
          Length = 131196

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   cacgccatgctacagtcctt 375
             ||||||||||||||||||||
Sbjct: 61477 cacgccatgctacagtcctt 61496
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>gb|AC016656.5|AC016656 Homo sapiens chromosome 5 clone RPCI-1_4M11, complete sequence
          Length = 174309

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 467    gaatggaagtagctagatggagat 490
              |||||||||| |||||||||||||
Sbjct: 129147 gaatggaagttgctagatggagat 129124
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>gb|AC010352.4|AC010352 Homo sapiens chromosome 5 clone CTD-2022F20, complete sequence
          Length = 102332

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 467   gaatggaagtagctagatggagat 490
             |||||||||| |||||||||||||
Sbjct: 70981 gaatggaagttgctagatggagat 70958
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>emb|AL805956.22| Mouse DNA sequence from clone RP23-239F1 on chromosome 4, complete
             sequence
          Length = 167440

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ctgctgcatgcagagcagtt 229
             ||||||||||||||||||||
Sbjct: 58943 ctgctgcatgcagagcagtt 58962
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>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence
          Length = 181047

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   gatcaactcaaaggcttttc 289
             ||||||||||||||||||||
Sbjct: 49149 gatcaactcaaaggcttttc 49130
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>dbj|AP000929.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-778B17, complete
              sequence
          Length = 197195

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    aataaagtacatggaaattg 313
              ||||||||||||||||||||
Sbjct: 196508 aataaagtacatggaaattg 196527
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>dbj|AP003781.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-49K4, complete
              sequence
          Length = 177748

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    aataaagtacatggaaattg 313
              ||||||||||||||||||||
Sbjct: 165676 aataaagtacatggaaattg 165695
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>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete
              sequence
          Length = 233270

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    atgcggcaactgcagaggat 508
              ||||||||||||||||||||
Sbjct: 198864 atgcggcaactgcagaggat 198845
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>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence
          Length = 214373

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ccatacacatggtacataga 346
             ||||||||||||||||||||
Sbjct: 13075 ccatacacatggtacataga 13094
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>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
             sequence
          Length = 198426

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   aacaagcaatacaacacaac 440
             ||||||||||||||||||||
Sbjct: 71663 aacaagcaatacaacacaac 71682
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>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete
              sequence
          Length = 202500

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ctgctgcatgcagagcagtt 229
              ||||||||||||||||||||
Sbjct: 112961 ctgctgcatgcagagcagtt 112980
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>dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1018C4, complete
              sequence
          Length = 174667

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    cacgccatgctacagtcctt 375
              ||||||||||||||||||||
Sbjct: 111770 cacgccatgctacagtcctt 111751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,108,181
Number of Sequences: 3902068
Number of extensions: 5108181
Number of successful extensions: 110027
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109799
Number of HSP's gapped (non-prelim): 228
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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