ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22m23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L28094.1|BLYCDNA Barley mRNA sequence Length = 942 Score = 1059 bits (534), Expect = 0.0 Identities = 547/550 (99%), Gaps = 1/550 (0%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatggacggaaagagtgaccatctaggtaggtacaggcagggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 caatgttagccgatgacaatggacggaaagagtgaccatctaggtaggtacaggcagggg 838 Query: 61 cacacccgcggcggaggacatacaccctaacaccgcaaggagcaccccgccggcgggggc 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 837 cacaccagcggcggaggacatacaccctaacaccgcaaggagcaccccgccggcgggg-c 779 Query: 121 gccaacagggagcgctatccgttatagcaggacggatggacggacgacatgaaaaaggta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 gccaacagggagcgctatccgttatagcaggacggatggacggacgacatgaaaaaggta 719 Query: 181 aaacaacatgacggtgtgaagtgaaacttgggataattctagtggagatggataggctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 aaacaacatgacggtgtgaagtgaaacttgggataattctagtggagatggataggctcc 659 Query: 241 ttatgacaaccaccacccacagctcaggggcctcgcgcagcagctcccgccttgtccgcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ttatgacaaccaccacccacagctcaggggcctcgcgcagcagctcccgccttgtccgcc 599 Query: 301 ggagcaaagatgcttcttctttactcgtcgtcatcctcgtcctcatcgctaccctcatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ggagcaaagatgcttcttctttactcgtcgtcatcctcgtcctcatcgctaccctcatcg 539 Query: 361 tcatcgtcgtcattgatctccgacttggacttgtcggattcctcctcatcttcctcctct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 tcatcgtcgtcattgatctccgacttggacttgtcggattcctcctcatcttcctcctct 479 Query: 421 acctccttggcagcggccttctttggggcagcagcagtgctctcgcccttgttgtaggca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 acctccttggcagcggccttctttggggcagcagcagtgctctcgcccttgttgtaggca 419 Query: 481 gcaatggccttgttgtactcgcccttgagcttgttggccttggcaacaaagggggccttt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gcaatggccttgttgtactcgcccttgagcttgttggccttggcaacaaagggggccttt 359 Query: 541 tcggattcgc 550 |||| ||||| Sbjct: 358 tcgggttcgc 349
>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein Length = 974 Score = 979 bits (494), Expect = 0.0 Identities = 536/550 (97%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatggacggaaagagtgaccatctaggtaggtacaggcagggg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 caatgttagccgataacaatggacggaaagagtgaccatctaggtaggtacaggcagggg 832 Query: 61 cacacccgcggcggaggacatacaccctaacaccgcaaggagcaccccgccggcgggggc 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 831 cacacccgcggcggaggacatacgccctaacaccgcaaggagcaccccgccggcgggggg 772 Query: 121 gccaacagggagcgctatccgttatagcaggacggatggacggacgacatgaaaaaggta 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 771 gccaacagggagcgctatccgttattgcaggacggatggacggacgacatgaaaaaggta 712 Query: 181 aaacaacatgacggtgtgaagtgaaacttgggataattctagtggagatggataggctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 aaacaacatgacggtgtgaagtgaaacttgggataattctagtggagatggataggctcc 652 Query: 241 ttatgacaaccaccacccacagctcaggggcctcgcgcagcagctcccgccttgtccgcc 300 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 651 ttatgacaaccaccacccacagttcaggggcctcgcgcagaagctcccgccttgtccgcc 592 Query: 301 ggagcaaagatgcttcttctttactcgtcgtcatcctcgtcctcatcgctaccctcatcg 360 ||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 591 ggagcaaagatgcttcttcttcactcggcggcatcctcggcctcatcgctaccctcatcg 532 Query: 361 tcatcgtcgtcattgatctccgacttggacttgtcggattcctcctcatcttcctcctct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 tcatcgtcgtcattgatctccgacttggacttgtcggattcctcctcatcttcctcctct 472 Query: 421 acctccttggcagcggccttctttggggcagcagcagtgctctcgcccttgttgtaggca 480 |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 471 acctccttggaagaggccttctttggggcagcagtagtgctctcgcccttgttgtaggaa 412 Query: 481 gcaatggccttgttgtactcgcccttgagcttgttggccttggcaacaaagggggccttt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gcaatggccttgttgtactcgcccttgagcttgttggccttggcaacaaagggggccttt 352 Query: 541 tcggattcgc 550 |||||||||| Sbjct: 351 tcggattcgc 342
>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW) Length = 923 Score = 496 bits (250), Expect = e-137 Identities = 363/399 (90%), Gaps = 15/399 (3%) Strand = Plus / Minus Query: 166 gacatgaaaaaggtaaaacaacatgacggtgtgaagtgaaacttgggataattctagtgg 225 |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 727 gacaggaaaaaggtaaaacaacatcacgatgtgaagtgaaacttgggataattctagtgg 668 Query: 226 agatggataggctccttatgacaaccaccacccacagctcaggggc---ctcgcgcagca 282 ||||||||||||||||||||||| ||||| | ||||||||||| | ||||| ||||| Sbjct: 667 agatggataggctccttatgaca-ccaccgcacacagctcaggtccgttctcgcacagca 609 Query: 283 gctcccgccttgtccgccggagca--------aagatgcttcttctttactcgtcgtcat 334 ||||||| |||||||||||||||| ||||||| ||||||| ||||||| || | Sbjct: 608 gctcccgacttgtccgccggagcagccttgacaagatgcgtcttcttcactcgtcatcgt 549 Query: 335 cctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccgacttggacttgt 394 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cctcgtcctcatcgctgccctcatcgtcatcgtcgtcattgatctccgacttggacttgt 489 Query: 395 cggattcctcctcatcttcctcctctacctccttggcagcggccttctttggg---gcag 451 | ||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 488 cagattcctcctcatcttcctcctctacctccttggccgcagccttctttggggcagcag 429 Query: 452 cagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagct 511 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cagcagcgctctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagct 369 Query: 512 tgttggccttggcaacaaagggggccttttcggattcgc 550 ||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 368 tgttggccttggccacatagggggccttttccgattcgc 330 Score = 129 bits (65), Expect = 1e-26 Identities = 136/154 (88%), Gaps = 8/154 (5%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatggacggaaagagtgaccatctaggtaggtacaggcagggg 60 |||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 877 caatgttagccggtgacaatggacggaaagagtaaccatc----taggtacaagcagggg 822 Query: 61 cacacccgcggcggaggacatacaccctaacaccgcaaggagca-ccccgccggcggggg 119 ||| ||||||| ||||||||||||||| |||| | ||| ||| ||| |||||||| || Sbjct: 821 cac-cccgcggaagaggacatacaccct-ccaccactagg-gcatcccggccggcggcgg 765 Query: 120 cgccaacagggagcgctatccgttatagcaggac 153 |||||||||||||||||||||||||||||||||| Sbjct: 764 cgccaacagggagcgctatccgttatagcaggac 731
>gb|AF531431.1| Zea mays nucleosome/chromatin assembly factor group D protein (nfd103) mRNA, complete cds Length = 887 Score = 202 bits (102), Expect = 9e-49 Identities = 188/217 (86%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| ||||| || ||||| || |||||||| || ||||| |||||||||| ||||| Sbjct: 578 actcgtcatcatcttcatcctcctcactaccctcttcatcatcctcgtcattgacctccg 519 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| || ||||| ||||||||||||||| |||||||||||| ||||||| Sbjct: 518 acttggacttgtcagactcctcttcatcttcctcctcttcctccttggcaggagccttct 459 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 458 t------agctgcagtgctctcgcccttgttgtaggcagcgatggccttgttgtactcga 405 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||| |||||||| ||| |||| ||||| Sbjct: 404 gcttgagcttgttagccttggctacatagggagcctt 368 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatagca 149 ||||||||| ||||||||||||||||||||| Sbjct: 763 ggcgccaacgaggagcgctatccgttatagca 732
>emb|X66077.1|ZMMNB1B Z.mays MNB1b mRNA for DNA-binding protein Length = 918 Score = 202 bits (102), Expect = 9e-49 Identities = 188/217 (86%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| ||||| || ||||| || |||||||| || ||||| |||||||||| ||||| Sbjct: 507 actcgtcatcatcttcatcctcctcactaccctcttcatcatcctcgtcattgacctccg 448 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| || ||||| ||||||||||||||| |||||||||||| ||||||| Sbjct: 447 acttggacttgtcagactcctcttcatcttcctcctcttcctccttggcaggagccttct 388 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 387 t------agctgcagtgctctcgcccttgttgtaggcagcgatggccttgttgtactcga 334 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||| |||||||| ||| |||| ||||| Sbjct: 333 gcttgagcttgttagccttggctacatagggagcctt 297 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatagca 149 ||||||||| ||||||||||||||||||||| Sbjct: 692 ggcgccaacgaggagcgctatccgttatagca 661
>emb|X58282.1|ZMHMGPMR Maize mRNA for a high mobility group protein Length = 885 Score = 202 bits (102), Expect = 9e-49 Identities = 188/217 (86%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| ||||| || ||||| || |||||||| || ||||| |||||||||| ||||| Sbjct: 511 actcgtcatcatcttcatcctcctcactaccctcttcatcatcctcgtcattgacctccg 452 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| || ||||| ||||||||||||||| |||||||||||| ||||||| Sbjct: 451 acttggacttgtcagactcctcttcatcttcctcctcttcctccttggcaggagccttct 392 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 391 t------agctgcagtgctctcgcccttgttgtaggcagcgatggccttgttgtactcga 338 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||| |||||||| ||| |||| ||||| Sbjct: 337 gcttgagcttgttagccttggctacatagggagcctt 301 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatagca 149 ||||||||| ||||||||||||||||||||| Sbjct: 696 ggcgccaacgaggagcgctatccgttatagca 665
>gb|AY103575.1| Zea mays PCO080122 mRNA sequence Length = 1153 Score = 202 bits (102), Expect = 9e-49 Identities = 188/217 (86%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| ||||| || ||||| || |||||||| || ||||| |||||||||| ||||| Sbjct: 699 actcgtcatcatcttcatcctcctcactaccctcttcatcatcctcgtcattgacctccg 640 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| || ||||| ||||||||||||||| |||||||||||| ||||||| Sbjct: 639 acttggacttgtcagactcctcttcatcttcctcctcttcctccttggcaggagccttct 580 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 579 t------agctgcagtgctctcgcccttgttgtaggcagcgatggccttgttgtactcga 526 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||| |||||||| ||| |||| ||||| Sbjct: 525 gcttgagcttgttagccttggctacatagggagcctt 489 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatagca 149 ||||||||| ||||||||||||||||||||| Sbjct: 884 ggcgccaacgaggagcgctatccgttatagca 853
>gb|BT016280.1| Zea mays clone Contig113 mRNA sequence Length = 817 Score = 186 bits (94), Expect = 5e-44 Identities = 186/217 (85%), Gaps = 6/217 (2%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| ||||| || ||||| || |||||||| || ||||| |||||||||| ||||| Sbjct: 808 actcgtcatcatcttcatcctcctcactaccctcttcatcatcctcgtcattgacctccg 749 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| || ||||| |||| |||||||||| |||||||||||| ||||||| Sbjct: 748 acttggacttgtcagactcctcttcatgttcctcctcttcctccttggcaggagccttct 689 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | ||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 688 t------agctgcagtgctctcgcccttgttgtaggcagcgatggccttgttgtagtcga 635 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||| |||||||| ||| |||| ||||| Sbjct: 634 gcttgagcttgttagccttggctacatagggagcctt 598
>gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 184 bits (93), Expect = 2e-43 Identities = 185/217 (85%), Gaps = 9/217 (4%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| || || || ||||| ||||| ||||| |||||||| || ||||||| ||| | Sbjct: 595 actcgtcatcgtcttcatcctcttcgctgccctcgtcgtcatcctcatcattgacctcgg 536 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| ||||||||||| || ||||||||| |||||||||| | ||||||| Sbjct: 535 acttggacttgtcagattcctcctcgtcgtcctcctcttcctccttggcgggtgccttct 476 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 tgg---------cagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgg 425 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||||||||||||| ||| |||| ||||| Sbjct: 424 ccttgagcttgttggccttggctacatagggagcctt 388 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 764 ggcgccaacaaggagcgctatccgttatag 735 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 860 caatgttagccgatgacaatgga 838
>dbj|AK068898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E23, full insert sequence Length = 998 Score = 184 bits (93), Expect = 2e-43 Identities = 185/217 (85%), Gaps = 9/217 (4%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| || || || ||||| ||||| ||||| |||||||| || ||||||| ||| | Sbjct: 704 actcgtcatcgtcttcatcctcttcgctgccctcgtcgtcatcctcatcattgacctcgg 645 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| ||||||||||| || ||||||||| |||||||||| | ||||||| Sbjct: 644 acttggacttgtcagattcctcctcgtcgtcctcctcttcctccttggcgggtgccttct 585 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 tgg---------cagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgg 534 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||||||||||||| ||| |||| ||||| Sbjct: 533 ccttgagcttgttggccttggctacatagggagcctt 497 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 873 ggcgccaacaaggagcgctatccgttatag 844 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 969 caatgttagccgatgacaatgga 947
>dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 184 bits (93), Expect = 2e-43 Identities = 185/217 (85%), Gaps = 9/217 (4%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| || || || ||||| ||||| ||||| |||||||| || ||||||| ||| | Sbjct: 619 actcgtcatcgtcttcatcctcttcgctgccctcgtcgtcatcctcatcattgacctcgg 560 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| ||||||||||| || ||||||||| |||||||||| | ||||||| Sbjct: 559 acttggacttgtcagattcctcctcgtcgtcctcctcttcctccttggcgggtgccttct 500 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 tgg---------cagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgg 449 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||||||||||||| ||| |||| ||||| Sbjct: 448 ccttgagcttgttggccttggctacatagggagcctt 412 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 788 ggcgccaacaaggagcgctatccgttatag 759 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 884 caatgttagccgatgacaatgga 862
>gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 184 bits (93), Expect = 2e-43 Identities = 185/217 (85%), Gaps = 9/217 (4%) Strand = Plus / Minus Query: 323 actcgtcgtcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcattgatctccg 382 ||||||| || || || ||||| ||||| ||||| |||||||| || ||||||| ||| | Sbjct: 546 actcgtcatcgtcttcatcctcttcgctgccctcgtcgtcatcctcatcattgacctcgg 487 Query: 383 acttggacttgtcggattcctcctcatcttcctcctctacctccttggcagcggccttct 442 ||||||||||||| ||||||||||| || ||||||||| |||||||||| | ||||||| Sbjct: 486 acttggacttgtcagattcctcctcgtcgtcctcctcttcctccttggcgggtgccttct 427 Query: 443 ttggggcagcagcagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgc 502 | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 tgg---------cagtgctctcgcccttgttgtaggcagcaatggccttgttgtactcgg 376 Query: 503 ccttgagcttgttggccttggcaacaaagggggcctt 539 |||||||||||||||||||||| ||| |||| ||||| Sbjct: 375 ccttgagcttgttggccttggctacatagggagcctt 339 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 715 ggcgccaacaaggagcgctatccgttatag 686 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 811 caatgttagccgatgacaatgga 789
>gb|AY262827.1| Oryza sativa (indica cultivar-group) HMGB1 gene, complete cds Length = 3659 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 462 ctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagcttgttggcctt 521 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2549 ctcgcccttgttgtaggcagcaatggccttgttgtactcggccttgagcttgttggcctt 2490 Query: 522 ggcaacaaagggggcctt 539 ||| ||| |||| ||||| Sbjct: 2489 ggctacatagggagcctt 2472 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 341 cctcatcgctaccctcatcgtcatcgtcgtcattgatctccgacttggacttgtcggatt 400 |||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||| |||| Sbjct: 2748 cctcttcgctgccctcgtcgtcatcctcatcattgacctcggacttggacttgtcagatt 2689 Query: 401 cctcctcatcttcctcctctacctccttggc 431 ||||||| || ||||||||| |||||||||| Sbjct: 2688 cctcctcgtcgtcctcctcttcctccttggc 2658 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 3220 ggcgccaacaaggagcgctatccgttatag 3191 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 3316 caatgttagccgatgacaatgga 3294
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 462 ctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagcttgttggcctt 521 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30478410 ctcgcccttgttgtaggcagcaatggccttgttgtactcggccttgagcttgttggcctt 30478351 Query: 522 ggcaacaaagggggcctt 539 ||| ||| |||| ||||| Sbjct: 30478350 ggctacatagggagcctt 30478333 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 341 cctcatcgctaccctcatcgtcatcgtcgtcattgatctccgacttggacttgtcggatt 400 |||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||| |||| Sbjct: 30478609 cctcttcgctgccctcgtcgtcatcctcatcattgacctcggacttggacttgtcagatt 30478550 Query: 401 cctcctcatcttcctcctctacctccttggc 431 ||||||| || ||||||||| |||||||||| Sbjct: 30478549 cctcctcgtcgtcctcctcttcctccttggc 30478519 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 30479094 ggcgccaacaaggagcgctatccgttatag 30479065 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 30479190 caatgttagccgatgacaatgga 30479168 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 19591901 tcctcctcatcttcctcctc 19591920
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 462 ctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagcttgttggcctt 521 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115771 ctcgcccttgttgtaggcagcaatggccttgttgtactcggccttgagcttgttggcctt 115712 Query: 522 ggcaacaaagggggcctt 539 ||| ||| |||| ||||| Sbjct: 115711 ggctacatagggagcctt 115694 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 341 cctcatcgctaccctcatcgtcatcgtcgtcattgatctccgacttggacttgtcggatt 400 |||| ||||| ||||| |||||||| || ||||||| ||| |||||||||||||| |||| Sbjct: 115970 cctcttcgctgccctcgtcgtcatcctcatcattgacctcggacttggacttgtcagatt 115911 Query: 401 cctcctcatcttcctcctctacctccttggc 431 ||||||| || ||||||||| |||||||||| Sbjct: 115910 cctcctcgtcgtcctcctcttcctccttggc 115880 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 116455 ggcgccaacaaggagcgctatccgttatag 116426 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 caatgttagccgatgacaatgga 23 ||||||||||||||||||||||| Sbjct: 116551 caatgttagccgatgacaatgga 116529
>gb|DQ083221.1| Oryza sativa (indica cultivar-group) clone 5B2A67 mRNA sequence Length = 395 Score = 117 bits (59), Expect = 4e-23 Identities = 118/139 (84%), Gaps = 9/139 (6%) Strand = Plus / Minus Query: 358 tcgtcatcgtcgtcattgatctccgacttggacttgtcggattcctcctcatcttcctcc 417 |||||||| || ||||||| ||| |||||||||||||| ||||||||||| || |||||| Sbjct: 130 tcgtcatcctcatcattgacctcggacttggacttgtcagattcctcctcgtcgtcctcc 71 Query: 418 tctacctccttggcagcggccttctttggggcagcagcagtgctctcgcccttgttgtag 477 ||| |||||||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 70 tcttcctccttggcgggtgccttcttgg---------cagtgctctcgcccttgttgtag 20 Query: 478 gcagcaatggccttgttgt 496 ||||||||||||||||||| Sbjct: 19 gcagcaatggccttgttgt 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatag 147 |||||||||| ||||||||||||||||||| Sbjct: 337 ggcgccaacaaggagcgctatccgttatag 308
>emb|AJ131373.1|ZMA131373 Zea mays hmga gene, exons 1-7 Length = 2133 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 349 ctaccctcatcgtcatcgtcgtcattgatctccgacttggacttgtcggattcctcctca 408 |||||||| || ||||| |||||||||| |||||||||||||||||| || ||||| ||| Sbjct: 1076 ctaccctcttcatcatcctcgtcattgacctccgacttggacttgtcagactcctcttca 1017 Query: 409 tcttcctcctctacctccttggcagcggccttctt 443 |||||||||||| |||||||||||| |||||||| Sbjct: 1016 tcttcctcctcttcctccttggcaggagccttctt 982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 462 ctcgcccttgttgtaggcagcaatggccttgttgtactcgcccttgagcttgttggcctt 521 ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct: 858 ctcgcccttgttgtaggcagcgatggccttgttgtactcgagcttgagcttgttagcctt 799 Query: 522 ggcaacaaagggggcctt 539 ||| ||| |||| ||||| Sbjct: 798 ggctacatagggagcctt 781 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 118 ggcgccaacagggagcgctatccgttatagca 149 ||||||||| ||||||||||||||||||||| Sbjct: 1563 ggcgccaacgaggagcgctatccgttatagca 1532
>gb|AY389691.1| Hyacinthus orientalis HMG transcription factor mRNA, partial cds Length = 764 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 382 gacttggacttgtcggattcctcctcatcttcctcctc 419 ||||||||||||||||| ||||| || ||||||||||| Sbjct: 412 gacttggacttgtcggactcctcatcgtcttcctcctc 375
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| ||||||||||||||||||| Sbjct: 79895 ttcctcctcttcttcctcctctacctcct 79867 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 79915 tcctcctcctcttcctcctcttcctcct 79888
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 391 ttgtcggattcctcctcatcttcctcctctacctcct 427 ||||| ||||||||||| || |||||||||||||||| Sbjct: 162443 ttgtcagattcctcctcctcctcctcctctacctcct 162407
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| ||||||||||||||||||| Sbjct: 12829 ttcctcctcttcttcctcctctacctcct 12801 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 12849 tcctcctcctcttcctcctcttcctcct 12822
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence Length = 148929 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 391 ttgtcggattcctcctcatcttcctcctctacctcct 427 ||||| ||||||||||| || |||||||||||||||| Sbjct: 94048 ttgtcagattcctcctcctcctcctcctctacctcct 94012
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||||||||||||| |||||| Sbjct: 121328 tcctcctcatcttcctcctcttcctcct 121355 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 121310 tcctcctcatcttcctcctc 121329 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 121265 tcctcctcctcttcctcctcttcctcct 121292
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||||||||| Sbjct: 144796 tcctcctcctcttcctcctctacctcct 144769 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||||||||| Sbjct: 144742 tcctcctcctcttcctcctctacctcct 144715 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 144923 ttcctcctcctcttcctcctcttcctcct 144895 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||| ||||||||||||| Sbjct: 144868 tcctcctcctcttcttcctctacctcct 144841 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||| ||||| Sbjct: 144769 tcctcctcttcttcctcctctaactcct 144742
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||||||||| Sbjct: 181009 tcctcctcctcttcctcctctacctcct 181036 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||||||||| Sbjct: 180982 tcctcctcttcttcctcctctacctcct 181009 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||||||||||||||||| Sbjct: 180955 tcctcctcctcttcctcctctacctcct 180982 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 180828 ttcctcctcctcttcctcctcttcctcct 180856 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| ||||| ||||||||||||| Sbjct: 180883 tcctcctcctcttcttcctctacctcct 180910
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||||||||||||| |||||| Sbjct: 30906 tcctcctcatcttcctcctcttcctcct 30879
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||||||||||||| |||||| Sbjct: 8361 tcctcctcatcttcctcctcttcctcct 8388
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||||||||||||| |||||| Sbjct: 129925 tcctcctcatcttcctcctcttcctcct 129898
>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence Length = 157682 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||||||||||||| |||||| Sbjct: 74236 tcctcctcatcttcctcctcttcctcct 74209
>ref|XM_528704.1| PREDICTED: Pan troglodytes similar to a disintegrin and metalloproteinase with thrombospondin motifs 9 isoform 1 preproprotein (LOC473333), mRNA Length = 7041 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||| ||||||||||||||||||| Sbjct: 260 cctcctcctcttcctcctctacctcct 286
>ref|XM_516145.1| PREDICTED: Pan troglodytes similar to Nucleolin (Protein C23) (LOC460006), mRNA Length = 1659 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 1583 tcgtcgtcatcctcgtcctcatc 1561
>ref|NM_030702.2| Mus musculus SUMO/sentrin specific peptidase 3 (Senp3), mRNA Length = 2311 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 454 ttcctcctcatcttcctcctcttcctc 428
>ref|XM_879595.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 4 (LOC504336), mRNA Length = 2510 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 1448 ttcctcctcatcttcctcctcttcctc 1422 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||||||||||||||| ||| |||||| Sbjct: 1481 ttcctcctcatcttcctcgtcttcctcct 1453
>ref|XM_879563.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 3 (LOC504336), mRNA Length = 2594 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 1532 ttcctcctcatcttcctcctcttcctc 1506 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||||||||||||||| ||| |||||| Sbjct: 1565 ttcctcctcatcttcctcgtcttcctcct 1537
>ref|XM_867050.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 2 (LOC504336), mRNA Length = 2582 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 1520 ttcctcctcatcttcctcctcttcctc 1494 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||||||||||||||| ||| |||||| Sbjct: 1553 ttcctcctcatcttcctcgtcttcctcct 1525
>ref|XM_580441.2| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 1 (LOC504336), mRNA Length = 2277 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 1215 ttcctcctcatcttcctcctcttcctc 1189 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||||||||||||||| ||| |||||| Sbjct: 1248 ttcctcctcatcttcctcgtcttcctcct 1220
>ref|NM_182920.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9 (ADAMTS9), mRNA Length = 7335 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||| ||||||||||||||||||| Sbjct: 292 cctcctcctcttcctcctctacctcct 318
>ref|NM_005381.2| Homo sapiens nucleolin (NCL), mRNA Length = 2732 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 887 tcgtcgtcatcctcgtcctcatc 865
>gb|BC037014.1| Mus musculus SUMO/sentrin specific peptidase 3, mRNA (cDNA clone MGC:46759 IMAGE:5344274), complete cds Length = 2220 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 343 ttcctcctcatcttcctcctcttcctc 317
>gb|BC036770.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9, mRNA (cDNA clone IMAGE:5760026), with apparent retained intron Length = 2912 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||| ||||||||||||||||||| Sbjct: 593 cctcctcctcttcctcctctacctcct 619
>ref|XM_445753.1| Candida glabrata CBS138, CAGL0E01485g partial mRNA Length = 4011 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 3102 ttcctcctcatcttcctcctcttcctc 3076
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctc 425 ||||||||| ||||||||||||||||| Sbjct: 46240 ttcctcctcctcttcctcctctacctc 46266
>gb|BC114741.1| Bos taurus cDNA clone MGC:138055 IMAGE:8082783, complete cds Length = 2580 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 1490 ttcctcctcatcttcctcctcttcctc 1464 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||||||||||||||| ||| |||||| Sbjct: 1523 ttcctcctcatcttcctcgtcttcctcct 1495
>ref|XM_500967.1| Yarrowia lipolytica CLIB122, YALI0B16280g predicted mRNA Length = 843 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 429 ggcagcggccttctttggggcagcagc 455 ||||||||||||||| ||||||||||| Sbjct: 705 ggcagcggccttcttgggggcagcagc 679
>ref|XM_504953.1| Yarrowia lipolytica CLIB122, YALI0F03567g predicted mRNA Length = 510 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 321 ttactcgtcgtcatcctcgtcctcatc 347 |||||||||||||||||| |||||||| Sbjct: 510 ttactcgtcgtcatcctcatcctcatc 484
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 139739 ttcctcctcatcttcctcctcttcctc 139765
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctc 425 ||||||||| ||||||||||||||||| Sbjct: 152147 ttcctcctcctcttcctcctctacctc 152173
>emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chromosome 11 Contains the 3' end of the Sat2 gene for spermidine/spermine N1-acetyl transferase 2, a ribosomal potein S15A (Rps15a) pseudogene, a ubiquitin-like 5 (Ubl5) pseudogene, the Fxr2h gene for autosomal homolog of fragile X mental retardation gene 2, the Sox15 gene for SRY-box containing gene 15, the Mpdu1 gene for mannose-P-dolichol utilization defect 1, the Cd68 gene for CD68 antigen, the Eif4a1 gene for eukaryotic translation initiation factor 4A1, the gene for sentrin/SUMO-specific protease Smt3ip1, the Tnfsf13 and Tnfsf12 genes for tumor necrosis factor (ligand) superfamily members 13 and 12, three novel genes, a ribosomal protein L13 (Rpl13) pseudogene, the Polr2a gene for polymerase (RNA) II (DNA directed) polypeptide A, the Amac1 gene for acyl-malonyl condensing enzyme, the gene for a novel BTB/POZ domain containing C2H2 type zinc finger protein, the Chrnb1 gene for nicotinic cholinergic receptor beta polypeptide 1 (muscle), the Fgf11 gene for fibroblast growth factor 11, a novel pseudogene, the gene for the ortholog of human and rat neuroligin 2 NLGN2, the gene for a novel protein of unknown function (DUF423) family member, the Plscr3 gene for phospholipid scramblase 3, the 3' end of the Tnk1 gene for non-receptor tyrosine kinase 1 and nine CpG islands, complete sequence Length = 234182 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 59811 ttcctcctcatcttcctcctcttcctc 59837
>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the 3' end of the Acac gene for acetyl-Coenzyme A carboxylase, complete sequence Length = 187803 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcc 426 ||||||||||||||||||||| ||||| Sbjct: 122192 tcctcctcatcttcctcctcttcctcc 122166
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||| ||||||||||||||||||| Sbjct: 129819 cctcctcctcttcctcctctacctcct 129793
>dbj|AK128584.1| Homo sapiens cDNA FLJ46743 fis, clone TRACH3021778, moderately similar to Nucleolin Length = 3967 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 1686 tcgtcgtcatcctcgtcctcatc 1664
>dbj|AK122805.1| Homo sapiens cDNA FLJ16383 fis, clone TLIVE2007016, highly similar to NUCLEOLIN Length = 2655 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 829 tcgtcgtcatcctcgtcctcatc 807
>dbj|AK095897.1| Homo sapiens cDNA FLJ38578 fis, clone HCHON2007674, highly similar to NUCLEOLIN Length = 2560 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 734 tcgtcgtcatcctcgtcctcatc 712
>dbj|AK091742.1| Homo sapiens cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to NUCLEOLIN Length = 2637 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 808 tcgtcgtcatcctcgtcctcatc 786
>dbj|AK001314.1| Homo sapiens cDNA FLJ10452 fis, clone NT2RP1000966, highly similar to NUCLEOLIN Length = 1893 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 279 tcgtcgtcatcctcgtcctcatc 257
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||||||||||||||| ||||||| Sbjct: 520716 cctcctcatcttcctcctccacctcct 520742
>ref|XM_686814.1| PREDICTED: Danio rerio similar to Esophageal cancer associated protein (LOC563454), mRNA Length = 2037 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctcta 421 ||||||||||||||||||||||| Sbjct: 51 ttcctcctcatcttcctcctcta 73
>ref|XM_684496.1| PREDICTED: Danio rerio similar to KIAA1476 protein (LOC561095), mRNA Length = 4113 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 331 tcatcctcgtcctcatcgctaccctcatcgtcatcgtcgtcat 373 |||||||| ||||||||||| ||||||| ||||| ||||||| Sbjct: 2825 tcatcctcatcctcatcgctgtcctcatcttcatcatcgtcat 2783
>dbj|AK088608.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021I18 product:sentrin/SUMO-specific protease, full insert sequence Length = 2220 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 366 ttcctcctcatcttcctcctcttcctc 340
>dbj|AK045071.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130024I17 product:sentrin/SUMO-specific protease, full insert sequence Length = 2311 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 454 ttcctcctcatcttcctcctcttcctc 428
>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence Length = 168880 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 69261 tcgtcgtcatcctcgtcctcatc 69283
>gb|AY008764.1| Mus musculus sentrin/SUMO-specific protease (SENP3) mRNA, complete cds Length = 2174 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 309 ttcctcctcatcttcctcctcttcctc 283
>gb|AF194031.1|AF194031 Mus musculus SMT3 isopeptidase 1 (Smt3ip) mRNA, complete cds Length = 1707 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctc 425 |||||||||||||||||||||| |||| Sbjct: 258 ttcctcctcatcttcctcctcttcctc 232
>gb|AF261918.1|AF261918 Homo sapiens disintegrin metalloproteinase with thrombospondin repeats (ADAMTS9) mRNA, complete cds Length = 3674 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcct 427 ||||||| ||||||||||||||||||| Sbjct: 272 cctcctcctcttcctcctctacctcct 298
>dbj|AK000250.1| Homo sapiens cDNA FLJ20243 fis, clone COLF6418, highly similar to NUCL_HUMAN NUCLEOLIN Length = 2312 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 571 tcgtcgtcatcctcgtcctcatc 549
>dbj|AK000221.1| Homo sapiens cDNA FLJ20214 fis, clone COLF2014, highly similar to NUCL_HUMAN NUCLEOLIN Length = 2542 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 845 tcgtcgtcatcctcgtcctcatc 823
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcc 426 ||||||||||||||||||||| ||||| Sbjct: 97271 tcctcctcatcttcctcctcttcctcc 97297
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 321 ttactcgtcgtcatcctcgtcctcatc 347 |||||||||||||||||| |||||||| Sbjct: 509579 ttactcgtcgtcatcctcatcctcatc 509553 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 2429143 tcctcctcatcttcctcctc 2429124
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 429 ggcagcggccttctttggggcagcagc 455 ||||||||||||||| ||||||||||| Sbjct: 2147056 ggcagcggccttcttgggggcagcagc 2147082
>gb|M60858.1|HUMNUCLEO Human nucleolin gene, complete cds Length = 10942 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tcgtcgtcatcctcgtcctcatc 347 ||||||||||||||||||||||| Sbjct: 4719 tcgtcgtcatcctcgtcctcatc 4697
>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence Length = 198570 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gcaaagatgcttcttctttact 325 |||||||||||||||||||||| Sbjct: 14532 gcaaagatgcttcttctttact 14553 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 35931 tcctcctcctcttcctcctcttcctcct 35958
>gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete sequence Length = 162638 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 tcgtcatcctcgtcctcatcgc 349 |||||||||||||||||||||| Sbjct: 122790 tcgtcatcctcgtcctcatcgc 122811
>gb|BC083373.1| Danio rerio zgc:103426, mRNA (cDNA clone MGC:103426 IMAGE:7233563), complete cds Length = 1095 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctc 425 |||||||||||||| ||||||||||| Sbjct: 195 tcctcctcatcttcatcctctacctc 220
>ref|XM_582943.2| PREDICTED: Bos taurus similar to malin (LOC538814), mRNA Length = 1185 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 ggcctcgcgcagcagctcccgc 290 |||||||||||||||||||||| Sbjct: 57 ggcctcgcgcagcagctcccgc 36
>ref|XM_586716.2| PREDICTED: Bos taurus similar to zinc finger and BTB domain containing 9 (LOC539371), mRNA Length = 1449 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctc 425 ||||||||||||||||||||| |||| Sbjct: 698 tcctcctcatcttcctcctcttcctc 673
>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence Length = 192627 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 79209 ttcctcctcctcttcctcctcttcctcctt 79180 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 84496 tcctcctcctcttcctcctcttcctcct 84469
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 398 attcctcctcatcttcctcctctacctcct 427 |||||||||| |||||||||||| |||||| Sbjct: 6603 attcctcctcctcttcctcctcttcctcct 6574
>ref|XM_715654.1| Candida albicans SC5314 hypothetical protein (CaO19_11788), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 327 ttcctcctcatcttcctcctct 348
>ref|XM_715653.1| Candida albicans SC5314 hypothetical protein (CaO19_11787), mRNA Length = 2307 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 228 ttcctcctcatcttcctcctct 207
>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete sequence Length = 189458 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 71079 ttcctcctcttcttcctcctcttcctcctt 71050
>ref|XM_843253.1| PREDICTED: Canis familiaris hypothetical protein LOC606822 (LOC606822), mRNA Length = 3393 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 398 attcctcctcatcttcctcctctacctcct 427 ||||| ||||||||||||||||| |||||| Sbjct: 1162 attccacctcatcttcctcctcttcctcct 1133
>ref|XM_747935.1| Aspergillus fumigatus Af293 Swr1p complex component Swc5 (Afu1g16610) partial mRNA Length = 1080 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 cgtcatcctcgtcctcatcgct 350 |||||||||||||||||||||| Sbjct: 313 cgtcatcctcgtcctcatcgct 292
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 398 attcctcctcatcttcctcctctacctcct 427 |||||||||| |||||||||||| |||||| Sbjct: 59692 attcctcctcctcttcctcctcttcctcct 59721
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 51280 ttcctcctcatcttcctcctct 51301
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 126719 ttcctcctcctcttcctcctctccctcctt 126748 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 126879 tcctcctcctcttcctcctctccctcctt 126907
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctccttg 429 |||||||||||||||||||| |||||||| Sbjct: 61961 tcctcctcatcttcctcctcctcctccttg 61990 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctccttg 429 |||||||||||||||||||| |||||||| Sbjct: 61814 tcctcctcatcttcctcctcctcctccttg 61843 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||||||||||||||| ||||||| Sbjct: 62126 tcctcctcatcttcctcctcctcctcctt 62154 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||||||||||||||| ||||||| Sbjct: 61997 tcctcctcatcttcctcctcctcctcctt 62025 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||||||||||||||| ||||||| Sbjct: 61850 tcctcctcatcttcctcctcctcctcctt 61878 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 61733 tcctcctcatcttcctcctc 61752 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 61703 tcctcctcatcttcctcctc 61722
>ref|XM_721940.1| Plasmodium yoelii yoelii str. 17XNL DNA repair protein RAD54 (PY00810) partial mRNA Length = 3494 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 2945 ttcctcctcatcttcctcctct 2924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 2957 ttcctcctcatcttcctcctc 2937
>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence Length = 197927 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 58591 ttcctcctcctcttcctcctctccctcctt 58620 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 58751 tcctcctcctcttcctcctctccctcctt 58779
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 135141 ttcctcctcttcttcctcctcttcctcctt 135112
>gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome 1, complete sequence Length = 174149 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 103311 ttcctcctcctcttcctcctcttcctcctt 103282
>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence Length = 199388 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 120687 ttcctcctcttcttcctcctcttcctcctt 120658
>gb|AC096792.12| Rattus norvegicus 7 BAC CH230-8O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 205454 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 37320 ttcctcctcctcttcctcctcttcctcctt 37291
>emb|AL162397.14| Human DNA sequence from clone RP11-86C4 on chromosome 9, complete sequence Length = 121963 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 398 attcctcctcatcttcctcctctacctcct 427 |||||||||| |||||||||||| |||||| Sbjct: 115334 attcctcctcttcttcctcctcttcctcct 115305
>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete sequence Length = 195281 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 134299 ttcctcctcatcttcctcctct 134320 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 26268 tcctcctcatcttcctcctc 26287
>emb|CR857215.1| Pongo pygmaeus mRNA; cDNA DKFZp469K1821 (from clone DKFZp469K1821) Length = 3147 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctc 425 ||||||||||||||||||||| |||| Sbjct: 2991 tcctcctcatcttcctcctcttcctc 2966
>gb|AY956392.1| Squalus acanthias acid-sensing ion channel 1 transcript variant 2 (ACCN2) mRNA, complete cds, alternatively spliced Length = 1888 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 310 ttcctcctcatcttcctcctct 289
>ref|NM_001006040.1| Danio rerio zgc:103426 (zgc:103426), mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctc 425 |||||||||||||| ||||||||||| Sbjct: 195 tcctcctcatcttcatcctctacctc 220
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tcatcttcctcctctacctcct 427 |||||||||||||||||||||| Sbjct: 1119536 tcatcttcctcctctacctcct 1119557
>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence Length = 159749 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 caccctaacaccgcaaggagca 104 |||||||||||||||||||||| Sbjct: 21603 caccctaacaccgcaaggagca 21624
>gb|BC102209.1| Bos taurus similar to 1810010N17Rik protein, mRNA (cDNA clone MGC:127184 IMAGE:7944527), complete cds Length = 794 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 481 ttcctcctcatcttcctcctct 460
>gb|AC153384.4| Mus musculus 6 BAC RP23-388D3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203979 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacct 424 ||||||||| |||||||||||||||| Sbjct: 22855 ttcctcctcttcttcctcctctacct 22830
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 193204 ttcctcctcatcttcctcctct 193183
>gb|AF488803.1| Homo sapiens a disintegrin-like and metalloprotease with thrombospondin type 1 motifs 9B (ADAMTS9) mRNA, complete cds Length = 5993 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctcc 426 ||||||| |||||||||||||||||| Sbjct: 292 cctcctcctcttcctcctctacctcc 317
>gb|AC097483.3| Homo sapiens BAC clone RP11-146N10 from 2, complete sequence Length = 98433 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcctt 428 |||||||||||||||||| ||||||| Sbjct: 43627 tcctcatcttcctcctcttcctcctt 43602
>gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-327J16, complete sequence Length = 116793 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 398 attcctcctcatcttcctcctctacctcct 427 |||||||||| |||||||||||| |||||| Sbjct: 54223 attcctcctcctcttcctcctcttcctcct 54252
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 caccctaacaccgcaaggagca 104 |||||||||||||||||||||| Sbjct: 46057 caccctaacaccgcaaggagca 46036
>ref|XM_217627.3| PREDICTED: Rattus norvegicus similar to BCL6 co-repressor-like 1 (LOC302810), mRNA Length = 5754 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 4036 ttcctcctcatcttcctcctct 4015
>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223830 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 218985 ttcctcctcatcttcctcctct 219006
>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198332 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 147026 ttcctcctcatcttcctcctct 147005
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 544122 ttcctcctcatcttcctcctct 544143 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 436091 tcctcctcatcttcctcctc 436110
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence Length = 189805 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 152963 ttcctcctcttcttcctcctcttcctcctt 152934
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 tcgtcatcctcgtcctcatcgc 349 |||||||||||||||||||||| Sbjct: 175503 tcgtcatcctcgtcctcatcgc 175482
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 gcaaagatgcttcttctttact 325 |||||||||||||||||||||| Sbjct: 25037 gcaaagatgcttcttctttact 25016 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 3638 tcctcctcctcttcctcctcttcctcct 3611
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 24542 ttcctcctcttcttcctcctcttcctcctt 24513
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 64523 ttcctcctcctcttcctcctcttcctcctt 64552
>gb|AC139299.3| Mus musculus BAC clone RP23-335D20 from 1, complete sequence Length = 204848 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 35662 ttcctcctcctcttcctcctcttcctcctt 35691
>gb|AC142115.3| Mus musculus BAC clone RP23-327M1 from 3, complete sequence Length = 174667 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| || ||||||||||||||||| Sbjct: 12244 ttcctcctcctcctcctcctctacctcctt 12215
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| |||||||||||| ||||||| Sbjct: 12989 ttcctcctcttcttcctcctcttcctcctt 13018
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcctt 428 ||||||||| || ||||||||||||||||| Sbjct: 13522 ttcctcctcctcctcctcctctacctcctt 13551
>ref|NM_001034305.1| Bos taurus similar to 1810010N17Rik protein (MGC127184), mRNA Length = 794 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 481 ttcctcctcatcttcctcctct 460
>gb|AC168272.8| Mus musculus 10 BAC RP24-261C21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189395 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctct 420 |||||||||||||||||||||| Sbjct: 6288 ttcctcctcatcttcctcctct 6309
>gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, complete sequence Length = 167766 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 35958 ttcctcctcttcttcctcctcttcctcct 35986
>gb|AC115931.7| Mus musculus chromosome 5, clone RP24-535K22, complete sequence Length = 148637 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 86771 tcctcctcctcttcctcctctccctcctt 86743
>gb|AC115795.11| Mus musculus chromosome 5, clone RP23-400O10, complete sequence Length = 207103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 198905 ttcctcctcttcttcctcctcttcctcct 198933 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 ||||||||||| ||||||||| |||||| Sbjct: 197480 tcctcctcatcgtcctcctcttcctcct 197453
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence Length = 190294 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||| ||||||||||||||| |||||| Sbjct: 157319 ttcctcgtcatcttcctcctcttcctcct 157347
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 4717 ttcctcctcctcttcctcctcttcctcct 4689
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tcgtcatcctcgtcctcatcg 348 ||||||||||||||||||||| Sbjct: 1382816 tcgtcatcctcgtcctcatcg 1382836
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 4600 ttcctcctcatcttcctcctc 4580
>ref|NM_121193.2| Arabidopsis thaliana unknown protein AT5G11550 mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 243 ttcctcctcatcttcctcctc 263
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 140778 ttcctcctcctcttcctcctctccctcct 140750
>gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, complete sequence Length = 185556 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 10163 ttcctcctcctcttcctcctcttcctcct 10191
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 32270 ttcctcctcctcttcctcctcttcctcct 32298
>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence Length = 189243 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacct 424 |||||||| |||||||||||||||| Sbjct: 107416 tcctcctcctcttcctcctctacct 107392
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 85580 ttcctcctcctcttcctcctcttcctcct 85608
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 92742 ttcctcctcctcttcctcctcttcctcct 92714
>gb|AC115011.27| Mus musculus chromosome 1, clone RP24-192A11, complete sequence Length = 173802 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 112741 tcctcctcctcttcctcctcttcctcctt 112769
>gb|AY633632.1| Petaurus breviceps voucher AMSM15128 microsatellite Pet8 sequence Length = 422 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctct 420 ||||||||||||||||||||| Sbjct: 43 tcctcctcatcttcctcctct 23
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 209429 ttcctcctcttcttcctcctcttcctcct 209457
>gb|AC151731.4| Mus musculus BAC clone RP23-401H13 from chromosome 9, complete sequence Length = 193536 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 131296 ttcctcctcttcttcctcctcttcctcct 131324
>gb|AC163351.2| Mus musculus BAC clone RP23-150D4 from chromosome 13, complete sequence Length = 214062 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 65909 ttcctcctcttcttcctcctcttcctcct 65881
>gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome 7, complete sequence Length = 188650 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 63507 tcctcctcctcttcctcctcttcctcctt 63535
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 158580 ttcctcctcctcttcctcctcttcctcct 158608
>ref|NM_001030934.1| Gallus gallus acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNA Length = 2702 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 780 ttcctcctcatcttcctcctc 760
>ref|XM_518639.1| PREDICTED: Pan troglodytes MDN1, midasin homolog (LOC462886), mRNA Length = 16110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 13650 ttcctcctcatcttcctcctc 13630
>ref|XM_527158.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 2V3 (LOC471780), mRNA Length = 948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacct 424 ||||||||||||||||| ||||||| Sbjct: 131 tcctcctcatcttcctcatctacct 155
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 135073 ttcctcctcctcttcctcctcttcctcct 135045
>gb|AC119874.12| Mus musculus chromosome 8, clone RP24-289B21, complete sequence Length = 170702 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 41442 ttcctcctcctcttcctcctcttcctcct 41414
>ref|XM_463553.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| || ||||||||||||||||| Sbjct: 281 tcctcctcctcctcctcctctacctcctt 253
>ref|XM_478260.1| Oryza sativa (japonica cultivar-group), mRNA Length = 159 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 cctcctcatcttcctcctctacctccttg 429 ||||||||||||| ||||||||| ||||| Sbjct: 45 cctcctcatcttcttcctctaccaccttg 73
>gb|AC101908.8| Mus musculus chromosome 1, clone RP24-275J1, complete sequence Length = 164826 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 146672 ttcctcctcctcttcctcctcttcctcct 146700
>gb|AC109201.12| Mus musculus chromosome 15, clone RP23-18P10, complete sequence Length = 213493 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 67696 ttcctcctcctcttcctcctcttcctcct 67724
>gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, complete sequence Length = 164313 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 56828 ttcctcctcttcttcctcctcttcctcct 56856
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 87431 ttcctcctcctcttcctcctcttcctcct 87459
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 186179 ttcctcctcctcttcctcctcttcctcct 186207
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence Length = 173589 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 89892 ttcctcctcatcttcctcctc 89872
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence Length = 159541 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 31238 ttcctcctcttcttcctcctcttcctcct 31210
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 33947 ttcctcctcctcttcctcctcttcctcct 33919
>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence Length = 218755 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 64787 ttcctcctcctcttcctcctcttcctcct 64815
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 tcgtcatcctcgtcctcatcg 348 ||||||||||||||||||||| Sbjct: 856508 tcgtcatcctcgtcctcatcg 856488
>gb|AF026521.1| Caenorhabditis elegans histone H1.4 gene, complete cds Length = 995 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cttggcagcggccttctttgg 446 ||||||||||||||||||||| Sbjct: 929 cttggcagcggccttctttgg 909
>gb|AF005371.1| Caenorhabditis elegans histone H1.4 mRNA, complete cds Length = 953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cttggcagcggccttctttgg 446 ||||||||||||||||||||| Sbjct: 743 cttggcagcggccttctttgg 723
>gb|AC004493.1| Homo sapiens chromosome 16, cosmid clone 373C8 (LANL), complete sequence Length = 43661 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 7643 ttcctcctcatcttcctcctc 7623
>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence Length = 211662 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 69476 ttcctcctcctcttcctcctcttcctcct 69448 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 69439 tcctcctcttcttcctcctctccctcct 69412
>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence Length = 171637 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 143873 ttcctcctcctcttcctcctcttcctcct 143901 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 144145 tcctcctcatcttcctcctc 144164 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 144103 tcctcctcctcttcctcctcttcctcct 144130 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 144064 tcctcctcctcttcctcctcttcctcct 144091 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 143964 tcctcctcatcttcctcctc 143983 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 143853 tcctcctcctcttcctcctcttcctcct 143880
>gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome 14, complete sequence Length = 205044 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 85265 tcctcctcctcttcctcctcttcctcctt 85293 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctct 420 ||||||||||||||||||||| Sbjct: 40772 tcctcctcatcttcctcctct 40792
>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence Length = 193784 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| || |||||||||||||||| Sbjct: 172599 ttcctcctcctcctcctcctctacctcct 172627
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 93631 ttcctcctcttcttcctcctcttcctcct 93603
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 55595 ttcctcctcctcttcctcctcttcctcct 55623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 101383 tcctcctcatcttcctcctc 101402 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 101332 tcctcctcatcttcctcctc 101351
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 159185 tcctcctcttcttcctcctcttcctcctt 159213
>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence Length = 179746 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctct 420 ||||||||||||||||||||| Sbjct: 44483 tcctcctcatcttcctcctct 44463
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 63389 ttcctcctcctcttcctcctcttcctcct 63361
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 57041 ttcctcctcctcttcctcctcttcctcct 57013 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 24019 ttcctcctcctcttcctcctcttcctcct 24047
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 175798 tcctcctcctcttcctcctcttcctcctt 175770
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 47839 ttcctcctcctcttcctcctcttcctcct 47811
>ref|XM_616638.2| PREDICTED: Bos taurus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC536506), mRNA Length = 3963 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 1479 ttcctcctcatcttcctcctc 1459
>gb|AC123253.4| Rattus norvegicus 12 BAC CH230-230N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231202 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 173622 ttcctcctcttcttcctcctcttcctcct 173594
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 196424 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctct 420 ||||||||||||||||||||| Sbjct: 106557 tcctcctcatcttcctcctct 106537 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 106572 tcctcctcatcttcctcctc 106553
>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research Institute) complete sequence Length = 213379 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 140477 ttcctcctcctcttcctcctcttcctcct 140449 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 140380 tcctcctcctcttcctcctcttcctcct 140353 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 140353 tcctcctcctcttcctcctcttcctcct 140326 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 140329 tcctcctcctcttcctcctcttcctcct 140302 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 140305 tcctcctcctcttcctcctcttcctcct 140278
>gb|AF130357.2| Mus musculus chromosome X clone CT7-148C10, complete sequence Length = 106724 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 90430 tcctcctcctcttcctcctcttcctcctt 90458 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 37701 ttcctcctcctcttcctcctcttcctcct 37729
>ref|XM_879792.1| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 3 (LOC513279), mRNA Length = 1936 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 894 ttcctcctcatcttcctcctc 914 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 883 tcctcctcatcttcctcctc 902
>ref|XM_879770.1| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 2 (LOC513279), mRNA Length = 1307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 510 ttcctcctcatcttcctcctc 530 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 499 tcctcctcatcttcctcctc 518
>ref|XM_590942.2| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 1 (LOC513279), mRNA Length = 5264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 4467 ttcctcctcatcttcctcctc 4487 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 4456 tcctcctcatcttcctcctc 4475
>ref|XM_368481.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00763.4) partial mRNA Length = 2661 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctct 420 ||||||||||||||||||||| Sbjct: 1166 tcctcctcatcttcctcctct 1146
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 111196 ttcctcctcctcttcctcctcttcctcct 111224 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 34747 tcctcctcctcttcctcctcttcctcct 34774
>ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 4 (UBTF), mRNA Length = 3212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ctcgtcgtcatcctcgtcctc 344 ||||||||||||||||||||| Sbjct: 2493 ctcgtcgtcatcctcgtcctc 2473
>ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 1 (UBTF), mRNA Length = 2895 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ctcgtcgtcatcctcgtcctc 344 ||||||||||||||||||||| Sbjct: 2176 ctcgtcgtcatcctcgtcctc 2156
>ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 2 (UBTF), mRNA Length = 3218 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ctcgtcgtcatcctcgtcctc 344 ||||||||||||||||||||| Sbjct: 2499 ctcgtcgtcatcctcgtcctc 2479
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 119961 ttcctcctcctcttcctcctcttcctcct 119933
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 2238 ttcctcctcctcttcctcctcttcctcct 2210
>ref|XM_461838.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G07337g) partial mRNA Length = 2313 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tcatcgtcatcgtcgtcattg 375 ||||||||||||||||||||| Sbjct: 1964 tcatcgtcatcgtcgtcattg 1944
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete sequence Length = 213181 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 52658 tcctcctcctcttcctcctcttcctcctt 52630
>gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, complete sequence Length = 197827 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 41135 ttcctcctcctcttcctcctcttcctcct 41107
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 135413 ttcctcctcttcttcctcctcttcctcct 135441
>ref|NM_011511.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 1, mRNA Length = 6034 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 3043 tcctcatcttcctcctcttcctcct 3019
>gb|AC147260.3| Mus musculus BAC clone RP24-186L11 from chromosome Y, complete sequence Length = 137361 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 58812 ttcctcctcctcttcctcctcttcctcct 58840
>gb|AC148009.3| Mus musculus BAC clone RP23-227B20 from chromosome 19, complete sequence Length = 201209 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||||| |||||||||| |||||| Sbjct: 69739 ttcctcctcattttcctcctcttcctcct 69767
>ref|NM_021042.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 4, mRNA Length = 5976 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 2994 tcctcatcttcctcctcttcctcct 2970
>ref|NM_021041.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA Length = 6210 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 3043 tcctcatcttcctcctcttcctcct 3019
>ref|NM_021043.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 3, mRNA Length = 6081 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 3099 tcctcatcttcctcctcttcctcct 3075
>ref|NM_198418.1| Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 7057 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 1523 tcctcatcttcctcctcttcctcct 1499
>gb|BC072624.1| Mus musculus CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:99937 IMAGE:6825309), complete cds Length = 4740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ctcgtcgtcatcctcgtcctc 344 ||||||||||||||||||||| Sbjct: 3280 ctcgtcgtcatcctcgtcctc 3260
>gb|BC021438.1| Mus musculus cDNA sequence BC021438, mRNA (cDNA clone MGC:29361 IMAGE:5039543), complete cds Length = 2604 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 813 ttcctcctcctcttcctcctcttcctcct 785
>gb|BC016094.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1, mRNA (cDNA clone MGC:27617 IMAGE:4504496), complete cds Length = 5244 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 3013 tcctcatcttcctcctcttcctcct 2989
>gb|AC124211.2| Mus musculus chromosome X clone CT7-497M13 map qA7.1, complete sequence Length = 114873 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 85201 ttcctcctcctcttcctcctcttcctcct 85229
>gb|AC126125.6| Rattus norvegicus 14 BAC CH230-25F8 (Children's Hospital Oakland Research Institute) complete sequence Length = 223844 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 175380 ttcctcctcctcttcctcctcttcctcct 175352 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 175469 tcctcctcctcttcctcctcttcctcct 175442
>ref|XM_876937.1| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 5 (LOC533643), mRNA Length = 2432 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1373 ttcctcctcttcttcctcctcttcctcct 1345
>ref|XM_876750.1| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 2 (LOC533643), mRNA Length = 2720 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1661 ttcctcctcttcttcctcctcttcctcct 1633
>ref|XM_613111.2| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 1 (LOC533643), mRNA Length = 2717 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1658 ttcctcctcttcttcctcctcttcctcct 1630
>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA Length = 5214 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 3196 ttcctcctcttcttcctcctcttcctcct 3168
>ref|NM_023831.2| Mus musculus RIKEN cDNA 1500035H01 gene (1500035H01Rik), mRNA Length = 3339 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 cctcatcgtcatcgtcgtcat 373 ||||||||||||||||||||| Sbjct: 452 cctcatcgtcatcgtcgtcat 432
>gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome 5, complete sequence Length = 211796 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacct 424 |||||||| |||||||||||||||| Sbjct: 204091 tcctcctcctcttcctcctctacct 204115
>ref|XM_718108.1| Candida albicans SC5314 putative DEAD box ATP-dependent RNA helicase (CaO19_5991), mRNA Length = 2727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tcatcgtcatcgtcgtcattg 375 ||||||||||||||||||||| Sbjct: 233 tcatcgtcatcgtcgtcattg 213
>ref|XM_717961.1| Candida albicans SC5314 putative DEAD box ATP-dependent RNA helicase (CaO19_13412), mRNA Length = 2727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tcatcgtcatcgtcgtcattg 375 ||||||||||||||||||||| Sbjct: 233 tcatcgtcatcgtcgtcattg 213
>ref|NM_133817.1| Mus musculus zinc finger protein 451 (Zfp451), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 cctcctcatcttcctcctctacctc 425 ||||||| ||||||||||||||||| Sbjct: 1775 cctcctcctcttcctcctctacctc 1751
>ref|NM_028412.1| Mus musculus CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA Length = 2756 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 ctcgtcgtcatcctcgtcctc 344 ||||||||||||||||||||| Sbjct: 2158 ctcgtcgtcatcctcgtcctc 2138
>ref|NM_008252.2| Mus musculus high mobility group box 2 (Hmgb2), mRNA Length = 1150 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||| ||||||||||||||| |||||| Sbjct: 766 ttcctcgtcatcttcctcctcttcctcct 738
>gb|BC016431.1| Mus musculus leprecan-like 2, mRNA (cDNA clone MGC:6579 IMAGE:3483280), complete cds Length = 2214 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1577 ttcctcctcttcttcctcctcttcctcct 1549
>gb|BC003726.1| Mus musculus leprecan-like 2, mRNA (cDNA clone MGC:5777 IMAGE:3497610), complete cds Length = 2289 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1677 ttcctcctcttcttcctcctcttcctcct 1649
>ref|NM_010455.1| Mus musculus homeo box A7 (Hoxa7), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 1847 ttcctcctcttcttcctcctcttcctcct 1819
>gb|AY463530.1| Mus musculus prolyl 3-hydroxylase 3 (P3h3) mRNA, complete cds Length = 2199 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 2091 ttcctcctcttcttcctcctcttcctcct 2063
>gb|AC117949.5| Mus musculus BAC clone RP23-197M6 from chromosome 18, complete sequence Length = 196445 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 194671 ttcctcctcctcttcctcctcttcctcct 194699
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 22632 ttcctcctcctcttcctcctcttcctcct 22604
>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence Length = 191322 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 62478 tcctcctcctcttcctcctcttcctcctt 62506
>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete sequence Length = 202525 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 122007 ttcctcctcctcttcctcctcttcctcct 121979
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 107143 ttcctcctcctcttcctcctcttcctcct 107115
>ref|XM_656838.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4326.2), mRNA Length = 3636 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 2759 tcctcatcttcctcctcttcctcct 2735
>ref|NM_020090.1| Rattus norvegicus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 3550 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 2926 ttcctcctcctcttcctcctcttcctcct 2898
>ref|NM_144813.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 5244 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 3013 tcctcatcttcctcctcttcctcct 2989
>ref|NM_013534.3| Mus musculus leprecan-like 2 (Leprel2), mRNA Length = 2779 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 2091 ttcctcctcttcttcctcctcttcctcct 2063
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 20633 ttcctcctcctcttcctcctcttcctcct 20661
>gb|AC110387.6| Rattus norvegicus 1 BAC CH230-209H8 (Children's Hospital Oakland Research Institute) complete sequence Length = 226439 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| ||||||||||| |||||||| Sbjct: 135351 tcctcctcctcttcctcctccacctcctt 135323
>ref|NM_016333.2| Homo sapiens serine/arginine repetitive matrix 2 (SRRM2), mRNA Length = 9027 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 8133 ttcctcctcatcttcctcctc 8153
>ref|NM_014611.1| Homo sapiens MDN1, midasin homolog (yeast) (MDN1), mRNA Length = 17400 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 14486 ttcctcctcatcttcctcctc 14466
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 108382 ttcctcctcttcttcctcctcttcctcct 108354
>gb|AC117740.12| Mus musculus chromosome 8, clone RP24-134P12, complete sequence Length = 186401 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 26544 ttcctcctcctcttcctcctcttcctcct 26516 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 26564 tcctcctcctcttcctcctcttcctcct 26537
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| |||||||||||| ||||||| Sbjct: 141267 tcctcctcctcttcctcctcttcctcctt 141239 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 285486 tcctcctcctcttcctcctcttcctcct 285459 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 tcctcctcatcttcctcctctacctcct 427 |||||||| |||||||||||| |||||| Sbjct: 285426 tcctcctcctcttcctcctcttcctcct 285399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctc 419 |||||||||||||||||||| Sbjct: 183597 tcctcctcatcttcctcctc 183616
>gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q24.13, complete sequence Length = 207084 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 402 ctcctcatcttcctcctctacctcc 426 ||||||||||||||||||| ||||| Sbjct: 158461 ctcctcatcttcctcctcttcctcc 158485
>gb|AC133329.4| Homo sapiens chromosome 8 clone RP11-89P9 map q24.13, complete sequence Length = 157249 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 402 ctcctcatcttcctcctctacctcc 426 ||||||||||||||||||| ||||| Sbjct: 82889 ctcctcatcttcctcctcttcctcc 82913
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 130901 ttcctcctcttcttcctcctcttcctcct 130929
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 33748 ttcctcctcatcttcctcctc 33728
>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence Length = 221807 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 166910 tcctcatcttcctcctcttcctcct 166934
>gb|AY539921.1| Rattus norvegicus LRRGT00170 mRNA, complete cds Length = 1491 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctc 419 ||||||||||||||||||||| Sbjct: 573 ttcctcctcatcttcctcctc 553
>gb|AC104868.8| Mus musculus chromosome 1, clone RP24-532K6, complete sequence Length = 182376 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 56502 ttcctcctcctcttcctcctcttcctcct 56530
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 183960 ttcctcctcttcttcctcctcttcctcct 183988
>gb|AC163668.5| Mus musculus BAC clone RP23-32P22 from chromosome 1, complete sequence Length = 222156 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 cctcctcatcttcctcctctacctc 425 ||||||| ||||||||||||||||| Sbjct: 116866 cctcctcctcttcctcctctacctc 116842
>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173015 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 ttcctcctcatcttcctcctctacctcct 427 |||||| ||||||||||||||| |||||| Sbjct: 116200 ttcctcatcatcttcctcctcttcctcct 116228
>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence Length = 208252 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 102964 tcctcatcttcctcctcttcctcct 102988
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 ttcctcctcatcttcctcctctacctcct 427 ||||||||| |||||||||||| |||||| Sbjct: 109883 ttcctcctcctcttcctcctcttcctcct 109855
>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 400 tcctcctcatcttcctcctctacctcctt 428 |||||||| || ||||||||||||||||| Sbjct: 117400 tcctcctcctcctcctcctctacctcctt 117428
>ref|XM_910563.2| PREDICTED: Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 6384 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 tcctcatcttcctcctctacctcct 427 |||||||||||||||||| |||||| Sbjct: 1379 tcctcatcttcctcctcttcctcct 1355 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,526,393 Number of Sequences: 3902068 Number of extensions: 4526393 Number of successful extensions: 155796 Number of sequences better than 10.0: 1727 Number of HSP's better than 10.0 without gapping: 1733 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 146886 Number of HSP's gapped (non-prelim): 8900 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
