>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent) (MS)
          Length = 1265

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/74 (25%), Positives = 37/74 (50%)
 Frame = -1

Query: 294 HDVLVDQEL*AQGVGRREHFIFVANYILLPSQNK*IKNDLVFTKFSIKLSHF*FTYFGVE 115
           +D++ D  +   G G  EH ++  N+I      K IK  L   + S  LS+  F++ G+E
Sbjct: 532 NDIIFDPNILTIGTGMEEHNLYAINFI---HATKVIKETLPGARISGGLSNLSFSFRGME 588

Query: 114 GVLHSNNFVIVLNS 73
            +  + + V + ++
Sbjct: 589 AIREAMHGVFLYHA 602

>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)|
          Length = 864

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 246 FFQLLEPKAPDQPIHHDSVSDQPVILCIVQKVQLDHVPRQHLHYRHFRMDGTEIRCRFWV 425
           FF+      P Q + +    +  V+LC +Q++ L+   R H  YRH+     +I   FW 
Sbjct: 718 FFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQR-HAIYRHYTRTSKQIMW-FWQ 775

Query: 426 F 428
           F
Sbjct: 776 F 776

>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)|
           (Itch) (Atrophin-1-interacting protein 4) (AIP4)
           (NFE2-associated polypeptide 1) (NAPP1)
          Length = 903

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 246 FFQLLEPKAPDQPIHHDSVSDQPVILCIVQKVQLDHVPRQHLHYRHFRMDGTEIRCRFWV 425
           FF+      P Q + +    +  V+LC +Q++ L+   R H  YRH+     +I   FW 
Sbjct: 757 FFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQR-HAIYRHYARTSKQIMW-FWQ 814

Query: 426 F 428
           F
Sbjct: 815 F 815


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,319,555
Number of Sequences: 219361
Number of extensions: 1654035
Number of successful extensions: 3773
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3773
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)