ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23b11 |
|---|---|
| Clone Library Name | barley_pub |
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase| Length = 882 Score = 42.4 bits (98), Expect = 0.002 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 3/142 (2%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELD---QIGDQIM 537 E L K+A L+ + + + E L K K+ +T+ + G ++++LD + ++I Sbjct: 549 EDLKKLAPLEKKLAALIHKKQE----LEKELKELNTKLESFGFKSVEDLDSKLRELEEIY 604 Query: 536 ERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 357 +R + + S +E QR+ + E + FE+ E E + K L ++K+ N EE Sbjct: 605 KRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKKLSQLKQKYNEEEY 664 Query: 356 KVKAKIEAQKVREIAEESAGSK 291 K K + + + +E+A A K Sbjct: 665 KKKREEKEELEKELARLEAQKK 686
>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift| suppressor 3) Length = 387 Score = 40.8 bits (94), Expect = 0.005 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 17/135 (12%) Frame = -2 Query: 638 SAYLTKFTKDADTEFDMIG-----------QNAMKEL---DQIGDQIMERLDSKMQSYEE 501 S Y+ KFT+ + + ++G N+MK+L D+ Q L S + + + Sbjct: 185 SPYVKKFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSK 244 Query: 500 TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG---KVKKPQNNEEIKVKAKIEAQ 330 + E++ + E ERVL + ++ KN+ K+ K K+ + + +I K + + Sbjct: 245 SIELENKIAERTERVLTELVGTGDKVKNKNKKKKNKNAKKKFKEEEASAKIPKKKRNRGK 304 Query: 329 KVREIAEESAGSKTR 285 K RE E+S SKT+ Sbjct: 305 KKRENREKSTISKTK 319
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)| Length = 1790 Score = 40.0 bits (92), Expect = 0.008 Identities = 30/147 (20%), Positives = 75/147 (51%), Gaps = 6/147 (4%) Frame = -2 Query: 701 LAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDS 522 L+ +L+ ++ I + DE +Y K T++ D + I ++ ++L+ + +Q+ +S Sbjct: 1420 LSNDELLEEKQNTIKSLQDEILSYKDKITRN-DEKLLSIERDNKRDLESLKEQLRAAQES 1478 Query: 521 K------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 K ++ EE + ++ E+E ++ +++ E I E NE S+ ++K ++E+ Sbjct: 1479 KAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTI--ESNETELKSSMETIRK--SDEK 1534 Query: 359 IKVKAKIEAQKVREIAEESAGSKTRMN 279 ++ K + ++ + E + +R+N Sbjct: 1535 LEQSKKSAEEDIKNLQHEKSDLISRIN 1561
>Y1739_STRPN (P67282) UPF0144 protein SP1739| Length = 534 Score = 38.9 bits (89), Expect = 0.017 Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Frame = -2 Query: 746 DAPXPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMK 567 +A G +R+ ++L A +++ ++ L+ + K+ ++ D EF ++ + Sbjct: 42 EATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----KSERQ 96 Query: 566 ELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE-EKNEGM 408 EL QI ++ ER D + S E+T E + Q I + L+ E+ +EE E+ + Sbjct: 97 ELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEA 156 Query: 407 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 312 + +G + + + + I A+ E REIA Sbjct: 157 ELERIGALSQAEARDII--LAQTEENLTREIA 186
>Y1584_STRR6 (P67283) UPF0144 protein spr1584| Length = 534 Score = 38.9 bits (89), Expect = 0.017 Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 7/152 (4%) Frame = -2 Query: 746 DAPXPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMK 567 +A G +R+ ++L A +++ ++ L+ + K+ ++ D EF ++ + Sbjct: 42 EATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----KSERQ 96 Query: 566 ELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE-EKNEGM 408 EL QI ++ ER D + S E+T E + Q I + L+ E+ +EE E+ + Sbjct: 97 ELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEA 156 Query: 407 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 312 + +G + + + + I A+ E REIA Sbjct: 157 ELERIGALSQAEARDII--LAQTEENLTREIA 186
>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)| Length = 1265 Score = 37.7 bits (86), Expect = 0.039 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Frame = -2 Query: 665 RITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQI---GDQIMERLDSKMQSYEETA 495 +I N A + KFT T + KE D + + ++ L K Q EE Sbjct: 873 QIKNLEISIDALMAKFTSTMMTR-----EQIQKEYDALVKSSEDLLSALQKKKQQEEEAE 927 Query: 494 EMQRQEIEMNE---RVLEDFEDWIEEEKNEGMFFKSLGKVK------KPQNNEEIKVKAK 342 ++R + EM + R ED E +EE+ M + K K K + ++E +++++ Sbjct: 928 RLRRIQEEMEKERKRREEDEERRRKEEEERRMKLEMEPKRKQEEEERKKREDDEKRIQSE 987 Query: 341 IEAQKVREIAEES 303 +EAQ R+ EES Sbjct: 988 VEAQLARQREEES 1000
>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat protein;| Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 1675 Score = 37.7 bits (86), Expect = 0.039 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 5/151 (3%) Frame = -2 Query: 722 DQRQQEVLAKIA--MLQTQKVRIT--NFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ 555 ++ +Q ++AK+ M ++ K+ I NF +++ D EF+ +G ++LDQ Sbjct: 336 EREKQAMIAKLEAKMKESSKMAIVEDNFNPNNEYLEDTYSEYEDLEFEKLGLTGWEDLDQ 395 Query: 554 IGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEE-EKNEGMFFKSLGKVKK 378 + E + +E ++ +EI + V E ED E K G + +L +++ Sbjct: 396 DSIETEE-----ITEWENPNQVLHREIRAYKSVSEQIEDIFGELLKEHGNYDMALKNLEE 450 Query: 377 PQNNEEIKVKAKIEAQKVREIAEESAGSKTR 285 + ++I+ +A+ + EIA+ S S+ R Sbjct: 451 KYDLDKIE-----KAKSIEEIAKSSTSSEIR 476
>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)| Length = 1285 Score = 37.4 bits (85), Expect = 0.050 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%) Frame = -2 Query: 590 MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 429 M + KE D + ++++ L K Q EE ++R + EM + R ED + + Sbjct: 890 MTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRK 949 Query: 428 EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 303 EE+ M + K K K + ++E +++A++EAQ R+ EES Sbjct: 950 EEEERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEES 997
>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) Length = 1030 Score = 37.0 bits (84), Expect = 0.066 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 11/117 (9%) Frame = -2 Query: 656 NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 489 ++L+ER Y ++ KD T+F + + + E + Q+ D ME D K+Q + T Sbjct: 912 SYLEERKPYSSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 971 Query: 488 QR------QEIEMNE-RVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKI 339 +R E+E E R LE +EEE K+ + K +N I+V +K+ Sbjct: 972 ERFADRSLLEMEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKL 1028
>MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)| Length = 1938 Score = 36.2 bits (82), Expect = 0.11 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 4/137 (2%) Frame = -2 Query: 725 GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 546 G + QEV + L+ +K + + LDE A L + E + E+ QI Sbjct: 1526 GGRTYQEVHKSVRRLEQEKDELQHALDEAEAAL-------EAEESKV-LRLQIEVQQIRS 1577 Query: 545 QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +I +R+ K + +E T + ++ +E + LE E K++ ++ K++ N Sbjct: 1578 EIEKRIQEKEEEFENTRKNHQRALESIQASLE------TEAKSKAELARAKKKLETDINQ 1631 Query: 365 EEIKV----KAKIEAQK 327 EI + KA ++AQK Sbjct: 1632 LEIALDHANKANVDAQK 1648
>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) (MBSP) (Serine/threonine protein phosphatase PP1 smooth muscle reg Length = 1032 Score = 36.2 bits (82), Expect = 0.11 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 11/117 (9%) Frame = -2 Query: 656 NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 489 ++L+ER Y ++ KD T+F + + + E + Q+ D ME D K+Q + T Sbjct: 914 SYLEERKPYGSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 973 Query: 488 QR------QEIEMNE-RVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKI 339 +R E+E E R LE +EEE K+ + K +N I+V +K+ Sbjct: 974 ERFADRSLLEMEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKL 1030
>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA| reducing factor 3B) (Up-frameshift suppressor 3 homolog B) (hUpf3B) (hUpf3p-X) Length = 483 Score = 36.2 bits (82), Expect = 0.11 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Frame = -2 Query: 653 FLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-MQRQE 477 FL+ + K T +T + I + + + ++ L +K + EE E +R+E Sbjct: 163 FLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRRE 222 Query: 476 IEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 327 IE + E+ W EEEK + + L K+ + +++K + KI+ + Sbjct: 223 IERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272
>TNNT_CAEEL (Q27371) Troponin T| Length = 405 Score = 35.4 bits (80), Expect = 0.19 Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Frame = -2 Query: 524 SKMQSYEETAEMQRQEIEMNERVLEDFEDW--IEEEKNEGMFFKSLGKVKKPQNNEEIKV 351 +K+ YE+ +++++IE R L++ ++ E E++E F + + + + EE + Sbjct: 80 AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139 Query: 350 KAKIEAQKVREIAEE 306 KAK +A+K+R+ E+ Sbjct: 140 KAKADAEKIRKNEEK 154
>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)| (Negative regulator of IL2) Length = 1124 Score = 35.4 bits (80), Expect = 0.19 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Frame = -2 Query: 581 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDF--EDWIEEEKNEGM 408 ++ +E D+ ++ E D +M+ +E E ++ + + E E+ E+ +EE +NEG Sbjct: 1026 ESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGE 1085 Query: 407 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 K+ G +K ++ + +A QKV E +E+ + KT Sbjct: 1086 EAKTEGLMK----DDRAESQASSLGQKVGESSEQVSEEKT 1121
>SAP1_SCHPO (P40847) Switch-activating protein 1| Length = 254 Score = 35.0 bits (79), Expect = 0.25 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Frame = -2 Query: 566 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 387 ELDQ+ D+ RL S++Q Y E + +++ + N+ + E + EE++N M + Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169 Query: 386 VKKP-QNNEE--IKVKAKIE 336 + K +NEE ++V AK++ Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189
>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 35.0 bits (79), Expect = 0.25 Identities = 27/139 (19%), Positives = 66/139 (47%), Gaps = 6/139 (4%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 528 ++ ++ A LQT+ ++ LDE+ A +++ T+ T ++L+ + Q+ E + Sbjct: 1272 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1323 Query: 527 DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +K +QS A++ R++ E + + + + +E +++ + Q Sbjct: 1324 KAKNALAHALQSARHAADLLREQYEEETETKAELQRVLSKANSEVAQWRTKYETDAIQRT 1383 Query: 365 EEIKVKAKIEAQKVREIAE 309 EE++ K AQ++++ E Sbjct: 1384 EELEEAKKKLAQRLQDAEE 1402
>TIG_OCEIH (Q8CXB7) Trigger factor (TF)| Length = 428 Score = 34.7 bits (78), Expect = 0.33 Identities = 20/94 (21%), Positives = 47/94 (50%) Frame = -2 Query: 587 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 408 I + KEL ++ D+ + +D +++S +E + +R E+E N++ +E +K E + Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL 292 Query: 407 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 306 ++K +N E+ + + +V ++ E Sbjct: 293 -------IQKASDNVEVDIPEAMVDTEVNQMVRE 319
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)| Length = 705 Score = 34.7 bits (78), Expect = 0.33 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 540 QR LA+++ ++R+ + T DA E I + E + +++ Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189 Query: 539 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKK 378 + LD++++ +E E +RQE E ER + E IEE + +K Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RK 237 Query: 377 PQNNEEIKVKAKIEAQKV----REIAEESAGSKTRMNI 276 Q+ E + K +++ Q + R+ EES K+ + Sbjct: 238 QQSLEAEEAKRRLKEQSIFGDQRDEEEESQMKKSESEV 275
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 34.3 bits (77), Expect = 0.43 Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 528 ++ ++ A LQT+ ++ LDE+ A +++ T+ T ++L+ + Q+ E + Sbjct: 1272 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1323 Query: 527 DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +K +QS ++ R++ E + + + + +E +++ + Q Sbjct: 1324 KAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRT 1383 Query: 365 EEIKVKAKIEAQKVREIAE 309 EE++ K AQ+++E E Sbjct: 1384 EELEEAKKKLAQRLQEAEE 1402
>CHM2B_BRARE (Q6NXD2) Charged multivesicular body protein 2b| (Chromatin-modifying protein 2b) (CHMP2b) Length = 214 Score = 34.3 bits (77), Expect = 0.43 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Frame = -2 Query: 725 GDQRQQEVLAK-IAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIG 549 G++ +VLAK + ++ QK R T + + ++ TK +++ M G AM + Sbjct: 53 GNRDACKVLAKQLVQVRKQKTR-TYAVSSKVTSMSTQTKLMNSQMKMAG--AMATTTKTM 109 Query: 548 DQIMERLDSK-----MQSYE-ETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 387 + +++D K +Q+++ ETA+M E MN+ + E FED +EE+++ + + L + Sbjct: 110 QAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDE 169 Query: 386 V 384 + Sbjct: 170 I 170
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 34.3 bits (77), Expect = 0.43 Identities = 29/124 (23%), Positives = 56/124 (45%) Frame = -2 Query: 674 QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA 495 +K++I + S+ + K + IG + +K+ G + + L +YE Sbjct: 469 KKLQIEQEKERLSSIIIKPRPEVQELIRNIGGSELKD----GIRASDLLRRPEMTYEHIH 524 Query: 494 EMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREI 315 + E+E+++ V E E I K EG KSL +V++ + E K+ I+ + + Sbjct: 525 LLVPSEVELSDEVTEQVEIQI---KYEGYIEKSLQQVERMKKMESKKIPVDIDYDAISSL 581 Query: 314 AEES 303 A E+ Sbjct: 582 ASEA 585
>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)| Length = 706 Score = 34.3 bits (77), Expect = 0.43 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 10/158 (6%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 540 QR LA+++ ++R+ + T DA E I + E + +++ Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189 Query: 539 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKK 378 + LD++++ +E E +RQE E ER + E IEE + +K Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RK 237 Query: 377 PQNNEEIKVKAKIEAQKV----REIAEESAGSKTRMNI 276 Q+ E + K +++ Q + R+ EES K+ + Sbjct: 238 QQSLEAEEAKRRLKDQSIFGDQRDEEEESQMKKSESEV 275
>TIG_STAES (Q8CNY4) Trigger factor (TF)| Length = 433 Score = 33.9 bits (76), Expect = 0.56 Identities = 34/130 (26%), Positives = 61/130 (46%) Frame = -2 Query: 689 AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQS 510 AM+ T+ R+ +R + + D T + + GQN + DQ+ D +R+ + + Sbjct: 307 AMINTELDRMIQEFGQR---IQQQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL 363 Query: 509 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 330 TA + IE+++ ED + E EK F S+ +K N +I VK + Q Sbjct: 364 ---TAIADEENIEVSD---EDIDK--ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQ 414 Query: 329 KVREIAEESA 300 KV ++ ++A Sbjct: 415 KVIDLLRDNA 424
>TIG_STAEQ (Q5HNM8) Trigger factor (TF)| Length = 433 Score = 33.9 bits (76), Expect = 0.56 Identities = 34/130 (26%), Positives = 61/130 (46%) Frame = -2 Query: 689 AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQS 510 AM+ T+ R+ +R + + D T + + GQN + DQ+ D +R+ + + Sbjct: 307 AMINTELDRMIQEFGQR---IQQQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL 363 Query: 509 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 330 TA + IE+++ ED + E EK F S+ +K N +I VK + Q Sbjct: 364 ---TAIADEENIEVSD---EDIDK--ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQ 414 Query: 329 KVREIAEESA 300 KV ++ ++A Sbjct: 415 KVIDLLRDNA 424
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) Length = 1197 Score = 33.9 bits (76), Expect = 0.56 Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 18/166 (10%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQKVR--ITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ--- 555 ++++ L +I + +++ I +ERS+YL Q M+E++ Sbjct: 186 EKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEY-------------QKVMREIEHLSR 232 Query: 554 --IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDWIEE-----EKNE 414 I Q + D+K++S EE EMQ ++E+ N++ ++ IEE +K Sbjct: 233 LYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKET 292 Query: 413 GMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 276 G+ +SL K ++ + +K EES + N+ Sbjct: 293 GVILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNM 338
>FAR10_YEAST (Q06001) Factor arrest protein 10| Length = 478 Score = 33.9 bits (76), Expect = 0.56 Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = -2 Query: 578 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 399 N L+ ++E+ D ++ + ++R+ E+++E + +++ + + MFFK Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369 Query: 398 SLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSK 291 +VKK +NNE+ K ++ +IE K R E S+ Sbjct: 370 KSFEVKKRRNNEKQKSMEREIEDLKTRLEVERYKNSQ 406
>TIG_HELHP (Q7VIN8) Trigger factor (TF)| Length = 442 Score = 33.9 bits (76), Expect = 0.56 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 20/145 (13%) Frame = -2 Query: 632 YLTKFTKDADTEFDM-IGQNAMKELDQIGDQIMERL---DSKMQS----YEETAEM-QRQ 480 Y K + FD+ + + KEL +I D+ + + +S +QS +E EM Q+ Sbjct: 225 YQAKHLAGKEASFDVTLHKILQKELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKT 284 Query: 479 EI---EMNERVLE--------DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 333 EI E+ E+++E D D I E++ + +F +L ++ KP+ ++IK + EA Sbjct: 285 EIYNKELKEKLVEILLKNISFDLPDLIVEQEMDILFRNALSQL-KPEEFDKIK-NNQDEA 342 Query: 332 QKVREIAEESAGSKTRMNIYLALMA 258 +K RE ++ A ++ + +A Sbjct: 343 KKQRETHKDEARKSVQITFIMDALA 367
>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)| Length = 413 Score = 33.9 bits (76), Expect = 0.56 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -2 Query: 548 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 D++ E+++ + YE+ ++ +E EM + E E +EEK E + ++KK + Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKKKK 373 Query: 368 NEEIKVKA-KIEAQKVREIAEE 306 E+ + K KI+ K RE +E Sbjct: 374 KEKQEEKGKKIKEGKKRERKQE 395
>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)| (MyHC-perinatal) Length = 1937 Score = 33.9 bits (76), Expect = 0.56 Identities = 26/139 (18%), Positives = 66/139 (47%), Gaps = 6/139 (4%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 528 ++ A+ A LQT+ + LDE+ A +++ ++ Q + ++++++ Q+ E Sbjct: 1275 DLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSK--------QASTQQIEELKHQLEEET 1326 Query: 527 DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +K +QS ++ R++ E + + + + + +E +++ + Q Sbjct: 1327 KAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRT 1386 Query: 365 EEIKVKAKIEAQKVREIAE 309 EE++ K AQ+++E E Sbjct: 1387 EELEEAKKKLAQRLQEAEE 1405
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 33.9 bits (76), Expect = 0.56 Identities = 29/124 (23%), Positives = 56/124 (45%) Frame = -2 Query: 674 QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA 495 +K++I + S+ + K + IG + +K+ G + + L +YE Sbjct: 469 KKLQIEQEKERLSSIIIKPRPEVQELIRNIGGSELKD----GIRASDLLRRPEMTYEHIH 524 Query: 494 EMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREI 315 + E+E+++ V E E I K EG KSL +V++ + E K+ I+ + + Sbjct: 525 LLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSL 581 Query: 314 AEES 303 A E+ Sbjct: 582 ASEA 585
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 33.9 bits (76), Expect = 0.56 Identities = 29/124 (23%), Positives = 56/124 (45%) Frame = -2 Query: 674 QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA 495 +K++I + S+ + K + IG + +K+ G + + L +YE Sbjct: 469 KKLQIEQEKERLSSIIIKPRPEVQELIRNIGGSELKD----GIRASDLLRRPEMTYEHIH 524 Query: 494 EMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREI 315 + E+E+++ V E E I K EG KSL +V++ + E K+ I+ + + Sbjct: 525 LLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDIDYDAISSL 581 Query: 314 AEES 303 A E+ Sbjct: 582 ASEA 585
>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)| Length = 778 Score = 33.9 bits (76), Expect = 0.56 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%) Frame = -2 Query: 524 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 360 SK + EET E++ +EIE V E+ ++ EEEK + F K + +VK+ +EE Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560 Query: 359 IKVKAKIEAQK--VREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVA 192 K+K +I+ K ++ I + + ++ A + + L + + V + V RK A Sbjct: 561 DKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTLEVGDYVLSDRVVVERKTA 618
>SPC97_YEAST (P38863) Spindle pole body component SPC97| Length = 823 Score = 33.5 bits (75), Expect = 0.73 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Frame = -2 Query: 686 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ--IMERLDSKMQ 513 +LQ I FL++ YL + + +F+ + +++EL+QI ++ + ++++ Sbjct: 134 VLQRFAYEIRRFLED--VYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELLYN 191 Query: 512 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 414 YEE + +E N+ EDF ++++ KNE Sbjct: 192 IYEEIFR-EIEERRTNQSSQEDFNNFMDSMKNE 223
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 33.5 bits (75), Expect = 0.73 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Frame = -2 Query: 569 KELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 399 KEL+QIGD +++L ++M+ Y+E A R+E+ +R +D+ E EKN G + Sbjct: 844 KELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS--EAEKNSGGLSR 898 Query: 398 SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 291 ++++ + ++ ++ AQ+++ + +E+ K Sbjct: 899 LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 382 Score = 33.5 bits (75), Expect = 0.73 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Frame = -2 Query: 611 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 450 DA EF+ I + +L I D+ +++ ++ + E+ + + +Q ++N E VL+ Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315 Query: 449 DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 357 DF ++IEE + + + + K+ K +N EEI Sbjct: 316 DFNNYIEEIRTKEL--EKAIKLSKTKNPEEI 344
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 33.5 bits (75), Expect = 0.73 Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 9/143 (6%) Frame = -2 Query: 710 QEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ----IGDQ 543 QE + K+ +L Q + E + +TK + A+ E D + + M +L + IG+ Sbjct: 1888 QEEVTKMNLLNQQ-------IQEELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIGNY 1940 Query: 542 IMERLDSKMQSYEETAEMQR-----QEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKK 378 + D+++++ +EM+ E+E ++ L + +E E + K G K+ Sbjct: 1941 CQDVTDAQIKNELLESEMKNLKKCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKE 2000 Query: 377 PQNNEEIKVKAKIEAQKVREIAE 309 P N K ++ +K +E+ + Sbjct: 2001 PGNKSHAKELQELLKEKQQEVKQ 2023
>Y164_METJA (Q57628) Hypothetical protein MJ0164| Length = 395 Score = 33.1 bits (74), Expect = 0.95 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 20/138 (14%) Frame = -2 Query: 629 LTKFTKDADTEFDMIGQNA------------MKELDQIGDQIMERLDS--------KMQS 510 L + KD +T D+ N MK LD+ ++ E+ DS + Sbjct: 208 LEEMLKDENTVIDVYEYNEKKTHVILELYPQMKILDENENKSSEKADSLESEGSITTAEE 267 Query: 509 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 330 EE + + R+E+ + E E+WIE L V +P + E ++K KIE++ Sbjct: 268 IEEESTVSREELLKKLGIKEPDENWIE---------TILEDVFRPSDEELEELKEKIESE 318 Query: 329 KVREIAEESAGSKTRMNI 276 V ++ S +N+ Sbjct: 319 IVNKVKRMEGVSDVLVNL 336
>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M| phase phosphoprotein 10) Length = 681 Score = 33.1 bits (74), Expect = 0.95 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%) Frame = -2 Query: 614 KDADTEFDMI-----------GQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEM 468 +D+D +FD+ GQ +E + D+ + S+M++Y E E + + + Sbjct: 169 EDSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKL--SEMEAYLENIEKEEERKDD 226 Query: 467 NERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 348 N+ ED FED I+ +++EG F S K+K +++ +K K Sbjct: 227 NDEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLKYK 267
>K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)| (Keratin-4) (K4) (Cytoskeletal 57 kDa keratin) Length = 525 Score = 33.1 bits (74), Expect = 0.95 Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Frame = -2 Query: 698 AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMER 531 A+ ++T + +F+D + +L + K +T+++++ Q K LD + + Sbjct: 145 AEREQIKTLNNKFASFID-KVRFLEQQNKVLETKWNLLQQQTTTTSPKSLDPFFETYINA 203 Query: 530 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 351 L + + + E++M + +EDF+ EEE N+ ++ V K + + Sbjct: 204 LRKNLDTLSNDKGRLQSELKMMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMI 263 Query: 350 KAKIEAQKVREIAEESAGSKTRMNIYLALM 261 K ++EA K+ + +E ++ LA M Sbjct: 264 KVELEA-KMESLKDEINFTRVLYEAELAQM 292
>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)| Length = 2663 Score = 33.1 bits (74), Expect = 0.95 Identities = 17/90 (18%), Positives = 43/90 (47%) Frame = -2 Query: 683 LQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYE 504 ++T+ +R+T L E + TK+ D + + + E DQ+ + + E + ++ E Sbjct: 1663 IETENIRLTQILHENLEEMRSVTKERD-DLRSVEETLKVERDQLKENLRETITRDLEKQE 1721 Query: 503 ETAEMQRQEIEMNERVLEDFEDWIEEEKNE 414 E ++ ++ ++ ++ + E+ NE Sbjct: 1722 E-LKIVHMHLKEHQETIDKLRGIVSEKTNE 1750
>RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.7 bits (73), Expect = 1.2 Identities = 13/53 (24%), Positives = 33/53 (62%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 276 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G +++ ++ Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDRGLRSKASL 568
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1934 Score = 32.7 bits (73), Expect = 1.2 Identities = 26/139 (18%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 528 ++ ++ A LQT+ ++ LDE+ A +++ T+ T ++L+ + Q+ E + Sbjct: 1271 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1322 Query: 527 DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +K +QS ++ R++ E + + + + +E +++ + Q Sbjct: 1323 KAKNTLAHALQSARHDCDLLREQYEEETEAKAELQCVLSKANSEVAQWRTKYETDAIQRT 1382 Query: 365 EEIKVKAKIEAQKVREIAE 309 EE++ K AQ++++ E Sbjct: 1383 EELEEAKKKLAQRLQDAEE 1401
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 32.7 bits (73), Expect = 1.2 Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Frame = -2 Query: 689 AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSK--- 519 A LQT+ ++ LDE+ A +++ T+ T ++L+ + Q+ E + +K Sbjct: 1278 AKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEVKAKNAL 1329 Query: 518 ---MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 348 +QS ++ R++ E + + + + +E +++ + Q EE++ Sbjct: 1330 AHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEA 1389 Query: 347 AKIEAQKVREIAE 309 K AQ++++ E Sbjct: 1390 KKKLAQRLQDAEE 1402
>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.2 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.2 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase| Length = 993 Score = 32.7 bits (73), Expect = 1.2 Identities = 25/105 (23%), Positives = 51/105 (48%) Frame = -2 Query: 548 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 ++ E+++ +SYEET E+ +LE+ E ++ E +E K +KK +N Sbjct: 161 EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEK-LKNEVSESEILKE-EILKKYEN 218 Query: 368 NEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIAN 234 E++K++ E ++ E E+ K + ++ + + L I N Sbjct: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQN 263
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 32.7 bits (73), Expect = 1.2 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 543 D++QQ++ + +L+ +K++ F +E + + + E M+ Q ++EL + Sbjct: 3107 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3165 Query: 542 IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 420 ++ + + + Q+ +ET Q+ ++E +++ + +EE+K Sbjct: 3166 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3210
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 32.7 bits (73), Expect = 1.2 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 543 D++QQ++ + +L+ +K++ F +E + + + E M+ Q ++EL + Sbjct: 3153 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3211 Query: 542 IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 420 ++ + + + Q+ +ET Q+ ++E +++ + +EE+K Sbjct: 3212 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3256
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 32.3 bits (72), Expect = 1.6 Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 22/129 (17%) Frame = -2 Query: 623 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEET---------AEMQRQEIE 471 K KD D++ D ++ K+L + +E L +K ++ EE AE + + ++ Sbjct: 117 KSRKDRDSKKDEEDEHGDKKL-KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALK 175 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE-----------AQ 330 ++ +E+ + +EEE+ + F+ LG+ ++ PQ E + + ++E Q Sbjct: 176 RRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQ 235 Query: 329 KVREIAEES 303 K+RE ++S Sbjct: 236 KIREEKDKS 244
>CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11| Length = 399 Score = 32.3 bits (72), Expect = 1.6 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 30/178 (16%) Frame = -2 Query: 722 DQRQQEVL--------AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMK 567 ++RQ+E++ A++ +Q Q+ +E + L + E + K Sbjct: 105 EKRQRELVQNTRLGLDAQVTSIQAQRQGARRMKEEEARILEQNKAQIKREDEQEKLQKQK 164 Query: 566 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNE----RVLEDFEDWIEEEKNEGMFFK 399 + + + + K++S + R+++++N R L+D +D +++K + + Sbjct: 165 RRQETRSSLKKAVQDKIESMQRE---YREDLDLNMKLVGRALQDLQDEADKKKQKR---E 218 Query: 398 SLGKVKKPQNN------EEIK------------VKAKIEAQKVREIAEESAGSKTRMN 279 +G+ +K N+ EE K +KAK A+K RE+A + A K MN Sbjct: 219 EMGREQKIYNDYLMQRREEEKAQEKELNRLLEDIKAKKLAEKDRELALQRAARKQLMN 276
>MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle| myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 32.3 bits (72), Expect = 1.6 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 8/150 (5%) Frame = -2 Query: 725 GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 546 GD+ + E+ K + LQ + ++ L+E KF KDA + +L + Sbjct: 1271 GDRLRVELAEKASKLQNELDNVSTLLEEAEKKGIKFAKDA--------ASLESQLQDTQE 1322 Query: 545 QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKP--- 375 + E K+ +++ ++ + E+ E+ E EK L KK Sbjct: 1323 LLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDD 1382 Query: 374 -----QNNEEIKVKAKIEAQKVREIAEESA 300 ++ EE K K +A+ + + EE A Sbjct: 1383 DLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)| Length = 648 Score = 32.3 bits (72), Expect = 1.6 Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 10/158 (6%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 540 QR LA+++ ++R+ + T DA E I + E + +++ Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189 Query: 539 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKK 378 + LD +++ +E E +RQE E ER + E IEE + +K Sbjct: 190 RKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RK 237 Query: 377 PQNNEEIKVKAKIEAQKV----REIAEESAGSKTRMNI 276 Q E + K +++ Q + R+ EE+ K+ + Sbjct: 238 QQTLEAEEAKRRLKEQSIFGDHRDEEEETHMKKSESEV 275
>MYH8_MOUSE (P13542) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)| (MyHC-perinatal) Length = 1937 Score = 32.3 bits (72), Expect = 1.6 Identities = 26/139 (18%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Frame = -2 Query: 707 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 528 E+ A+ A LQT+ + LDE+ A +++ ++ Q + ++++++ Q+ E Sbjct: 1275 ELTAQRARLQTEAGEYSRQLDEKDALVSQLSRSK--------QASTQQIEELKRQLEEET 1326 Query: 527 DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 366 +K +QS ++ R++ E + + + + + +E +++ + Q Sbjct: 1327 KAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRT 1386 Query: 365 EEIKVKAKIEAQKVREIAE 309 EE++ K AQ+++ E Sbjct: 1387 EELEEAKKKLAQRLQAAEE 1405
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 32.3 bits (72), Expect = 1.6 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 543 D++QQ++ + +L+ +K++ F +E + + + E M+ Q ++EL + Sbjct: 3139 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3197 Query: 542 IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 420 ++ + + + Q+ +ET Q+ ++E +++ + +EE+K Sbjct: 3198 LLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3242
>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445| Length = 368 Score = 32.0 bits (71), Expect = 2.1 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Frame = -2 Query: 488 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 333 ++Q E N+R++ + + D+++ +K F S+G++K+P N +++ K +++A Sbjct: 73 EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127
>RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.0 bits (71), Expect = 2.1 Identities = 16/71 (22%), Positives = 39/71 (54%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 255 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G + + + +I Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDQGLRNKAS------SI 569 Query: 254 LGLTIANAVFA 222 + T+ A+ + Sbjct: 570 VDTTVGRALLS 580
>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2213 Score = 32.0 bits (71), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1912 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1971 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1972 KIPVLMEEKLFAFDYTGYDASLSP 1995
>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHRNPGVVTGSAVGCDPDLFWS 1963 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)| (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution related gene on chromosome 14) Length = 1979 Score = 32.0 bits (71), Expect = 2.1 Identities = 20/92 (21%), Positives = 43/92 (46%) Frame = -2 Query: 581 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 402 QN +E+D ++ ++ Q E + R+E+ E +E+ E+ + ++ G+ Sbjct: 223 QNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIE 281 Query: 401 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 306 L K+ + Q ++ K+E+ K E E+ Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTKKMEQLED 313
>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2| Length = 590 Score = 32.0 bits (71), Expect = 2.1 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Frame = -2 Query: 569 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 390 K+ D+I ++ E +++ + ++ E + QE E + + E+ E+E+NE K L Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552 Query: 389 KVKKPQNNEEIKVKAKIEAQK------VREIAEE 306 K +K N+ K K + + QK V E+AE+ Sbjct: 553 KTQK--KNQSKKAKKQQQKQKQNETNDVEEVAED 584
>POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2206 Score = 32.0 bits (71), Expect = 2.1 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1965 KIPVLMEEKLFAFDYTGYDASLSP 1988
>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)| (hTFIIIB90) (B-related factor 1) (BRF-1) Length = 676 Score = 31.6 bits (70), Expect = 2.8 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 10/85 (11%) Frame = -2 Query: 710 QEVLAKIAMLQ-TQKVRITNFLDERSAYLT--KFTK-DADTEFDMIGQNA------MKEL 561 +EV++ + + + T + R+T F D ++ LT +F K D + E D A MK+L Sbjct: 247 KEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQL 306 Query: 560 DQIGDQIMERLDSKMQSYEETAEMQ 486 +Q+ + +E ++ ++ SY++ E++ Sbjct: 307 EQVLSKKLEEVEGEISSYQDAIEIE 331
>RNF17_HUMAN (Q9BXT8) RING finger protein 17| Length = 653 Score = 31.6 bits (70), Expect = 2.8 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 12/148 (8%) Frame = -2 Query: 734 PHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ 555 P G ++ ++ K+ +T K +F T + A T+ ++ +A+ Sbjct: 88 PMAGYIKEDSIMEKLQP-KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTN 146 Query: 554 IGDQIMERLDSKMQSYEETA-------EMQRQEIEMNERVLEDFEDWIEE-----EKNEG 411 ++I E L++ S+E+ + MQ+Q IE ERV+E E ++ + + Sbjct: 147 TAEEIDEALNTAHHSFEQLSIAGKALEHMQKQTIEERERVIEVVEKQFDQLLAFFDSRKK 206 Query: 410 MFFKSLGKVKKPQNNEEIKVKAKIEAQK 327 + + + IK K+ IE +K Sbjct: 207 NLCEEFARTTDDYLSNLIKAKSYIEEKK 234
>POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2204 Score = 31.6 bits (70), Expect = 2.8 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 200 KVAAL 186 K+ L Sbjct: 1965 KIPVL 1969
>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase| Length = 1070 Score = 31.6 bits (70), Expect = 2.8 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 4/101 (3%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 L+E+ + L + T+ A+KE + GD + LDS+MQS + EIE Sbjct: 417 LEEKESLLRDRKNEVSTKLGF----ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIE 471 Query: 470 MNERVLEDFE----DWIEEEKNEGMFFKSLGKVKKPQNNEE 360 E+ + D D+ E++ K+LG ++ N E Sbjct: 472 ALEKEIRDNSKAVLDFQEQKSEVFAGLKALGFTEEQLENLE 512
>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -2 Query: 365 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 201 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 200 KVAALGLIFIGLVAQVTYEQDISP 129 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 31.6 bits (70), Expect = 2.8 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 18/131 (13%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 438 T+D D + + G+ ++ D+ GD+ E + + EE E + E E V ++ E+ Sbjct: 96 TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155 Query: 437 WIEEEKNEG-----------MFFKSLGKVKKPQNN-------EEIKVKAKIEAQKVREIA 312 EEE+ E + + +K NN +E+ K+ + K+ E A Sbjct: 156 EEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNSDEYDNYDELVAKSLLNLGKIAEDA 215 Query: 311 EESAGSKTRMN 279 A +++ MN Sbjct: 216 AYRARTESEMN 226
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 31.6 bits (70), Expect = 2.8 Identities = 37/156 (23%), Positives = 66/156 (42%) Frame = -2 Query: 599 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 420 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1849 EQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK-------VRAEM 1901 Query: 419 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTI 240 + K+ + + +E+ K + + EA + RE+AEE+A + LA A + Sbjct: 1902 EVLLASKAKAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRA-----LAEEAKRQRQL 1956 Query: 239 ANAVFATPEVEWRKVAALGLIFIGLVAQVTYEQDIS 132 A A E +V A L IG ++ E +I+ Sbjct: 1957 AEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIA 1992
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 31.6 bits (70), Expect = 2.8 Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Frame = -2 Query: 623 KFTKDA-DTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLED 447 K+ KD DT++ + + A K +IG +E +++S E + + + + +++ LE Sbjct: 1815 KYEKDLKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEG 1874 Query: 446 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 D + + + GK+K E+ ++ ++E ++RE EE+ SK+ Sbjct: 1875 EIDNLRAQ------IEDEGKIKMRLEKEKRALEGELE--ELRETVEEAEDSKS 1919
>FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1)| Length = 428 Score = 31.6 bits (70), Expect = 2.8 Identities = 26/109 (23%), Positives = 57/109 (52%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 438 T+ AD++ ++ Q A + + +L ++++ +E +++ +EIE+ E V + Sbjct: 210 TRMADSKRELELQKAAFNQEVNTKKAESQLAYELEAAKEQQKIRLEEIEI-EVVQRKKQI 268 Query: 437 WIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 IEE++ E + + VK+P E K++ E QK++++ A S+ Sbjct: 269 SIEEKEIERTEKELIATVKRPAEAEAYKMQQLAEGQKLKKVLIAQAESE 317
>ADIP_RAT (Q8CGZ2) Afadin- and alpha-actinin-binding protein (ADIP) (Afadin| DIL domain-interacting protein) Length = 613 Score = 31.6 bits (70), Expect = 2.8 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 4/146 (2%) Frame = -2 Query: 719 QRQQEVLAKIAMLQT----QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQI 552 Q+ Q ++A A +K R N L ER L KD + D+ L+ + Sbjct: 181 QKLQNIIASRATQYNHDVKRKEREYNKLKERLHQLVMNKKDKNIAMDV--------LNYV 232 Query: 551 GDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQ 372 G R+D K S+ R E EM + +L D+E +K + L KV + Sbjct: 233 G-----RVDGKRGSWRTDKTEARNEDEMYKILLNDYE---YRQKQILLENAELKKVLQQM 284 Query: 371 NNEEIKVKAKIEAQKVREIAEESAGS 294 E I + + + +K RE AE+S G+ Sbjct: 285 KKEMISLLSP-QKKKPRERAEDSTGT 309
>TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TFIIIB90)| (hTFIIIB90) (B-related factor 1) (BRF-1) (hBRF) (TATA box-binding protein-associated factor, RNA polymerase III, subunit 2) (TAF3B2) Length = 677 Score = 31.6 bits (70), Expect = 2.8 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 10/85 (11%) Frame = -2 Query: 710 QEVLAKIAMLQ-TQKVRITNFLDERSAYLT--KFTK-DADTEFDMIGQNA------MKEL 561 +EV++ + + + T + R+T F D ++ LT +F K D + E D A MK+L Sbjct: 247 KEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQL 306 Query: 560 DQIGDQIMERLDSKMQSYEETAEMQ 486 +Q+ + +E ++ ++ SY++ E++ Sbjct: 307 EQVLSKKLEEVEGEISSYQDAIEIE 331
>Y124_METJA (Q57588) Hypothetical protein MJ0124| Length = 1075 Score = 31.2 bits (69), Expect = 3.6 Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Frame = -2 Query: 560 DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGMFFKSL 393 + IG + ++R + + + + +Q + + +LE E DWI + ++ ++ ++ Sbjct: 895 ENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAI 954 Query: 392 GKVKKPQNNEEIKVKAKIEAQKVRE 318 + + +NN + K+K K ++++E Sbjct: 955 KNLMELKNNYDKKIKGKSSIERIKE 979
>SPFH2_MOUSE (Q8BFZ9) SPFH domain-containing protein 2 precursor| Length = 340 Score = 31.2 bits (69), Expect = 3.6 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Frame = -2 Query: 686 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ-------------IGD 546 M+ ++ + NFL + Y AD + +I EL+Q + D Sbjct: 83 MIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFD 142 Query: 545 QIMERLDSKMQ----SYEETAEMQRQEI---EMNERVLEDFEDWIEEEKNEGMFFKSLGK 387 QI E L +Q S +Q + + E + ++E +E EK + + K Sbjct: 143 QIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYE-LMESEKTKLLIAAQKQK 201 Query: 386 VKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 V + + E K KA IEA+KV ++AE + G K Sbjct: 202 VVEKEAETERK-KALIEAEKVAQVAEITYGQK 232
>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.6 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDAVDGKRT 565
>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.6 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.6 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -2 Query: 434 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 288 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>MYH10_BOVIN (Q27991) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle| myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 31.2 bits (69), Expect = 3.6 Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 8/150 (5%) Frame = -2 Query: 725 GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDA--------DTEFDMIGQNAM 570 GD+ + E+ K LQ + ++ L+E KF KDA DT+ +++ + Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQ-ELLQEETR 1329 Query: 569 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 390 ++L+ + +L+ + S +E E + + E+ L+ + + + K + LG Sbjct: 1330 QKLNL--SSRIRQLEEERSSLQEQQEEEEEARRSLEKQLQALQAQLTDTKKK--VDDDLG 1385 Query: 389 KVKKPQNNEEIKVKAKIEAQKVREIAEESA 300 + +N EE K K + + + + EE A Sbjct: 1386 TI---ENLEEAKKKLLKDVEVLSQRLEEKA 1412
>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)| Length = 1683 Score = 31.2 bits (69), Expect = 3.6 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -2 Query: 569 KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 426 K LDQIG+ + SK + AE++RQ+I EM +R L + WI + Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489
>FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA| Length = 1302 Score = 31.2 bits (69), Expect = 3.6 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 447 TK AD F G A+ ELD GD I+ D+ QS ++ + I + NE R LE+ Sbjct: 353 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEE 411
>ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 321 Score = 31.2 bits (69), Expect = 3.6 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -2 Query: 638 SAYLTKFTKDADTEFDMIGQNA--MKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN 465 ++ L K + A T +++G A +KEL+ I + + E L + Y+E A+ +Q Sbjct: 236 ASILWKSAEKASTAAEVMGLTASRLKELELIDNIVTEPLGGAHRQYDEMAQALKQ----- 290 Query: 464 ERVLEDFED 438 R+L D ED Sbjct: 291 -RILSDLED 298
>YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4| Length = 267 Score = 31.2 bits (69), Expect = 3.6 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 284 MNIYLALMAILGLTIANAVFATPEVEWRKVAALGLIFIGLVAQVTYE 144 +N L L+A+LG+ + P + W+ V L L+F+G ++ Y+ Sbjct: 76 VNFSLVLLALLGINSKVSSMILPALVWKCVLLLFLLFLGCISVDAYQ 122
>SPFH2_PONPY (Q5R7C5) SPFH domain-containing protein 2 precursor| Length = 339 Score = 31.2 bits (69), Expect = 3.6 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Frame = -2 Query: 686 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ-------------IGD 546 M+ ++ + NFL + Y AD + +I EL+Q + D Sbjct: 83 MIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFD 142 Query: 545 QIMERLDSKMQ----SYEETAEMQRQEI---EMNERVLEDFEDWIEEEKNEGMFFKSLGK 387 QI E L +Q S +Q + + E + ++E +E EK + + K Sbjct: 143 QIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYE-LMESEKTKLLIAAQKQK 201 Query: 386 VKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 V + + E K KA IEA+KV ++AE + G K Sbjct: 202 VVEKEAETERK-KALIEAEKVAQVAEITYGQK 232
>SPFH2_HUMAN (O94905) SPFH domain-containing protein 2 precursor| Length = 339 Score = 31.2 bits (69), Expect = 3.6 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%) Frame = -2 Query: 686 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ-------------IGD 546 M+ ++ + NFL + Y AD + +I EL+Q + D Sbjct: 83 MIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFD 142 Query: 545 QIMERLDSKMQ----SYEETAEMQRQEI---EMNERVLEDFEDWIEEEKNEGMFFKSLGK 387 QI E L +Q S +Q + + E + ++E +E EK + + K Sbjct: 143 QIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYE-LMESEKTKLLIAAQKQK 201 Query: 386 VKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 V + + E K KA IEA+KV ++AE + G K Sbjct: 202 VVEKEAETERK-KALIEAEKVAQVAEITYGQK 232
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 31.2 bits (69), Expect = 3.6 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Frame = -2 Query: 545 QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEEEKNEGMFFKSLGKVKK 378 Q +E L ++Q EE AE+Q E+E N E +ED I+E F++ K K+ Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE-------FEAALKAKE 1867 Query: 377 PQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEW 204 E +I+A R+ A + + + A+ +A A A PE++W Sbjct: 1868 ATIAER---NLEIDALNQRKAAHSAELEAVLLALARIRRALEQQPLA-AGAAPPELQW 1921
>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37| Length = 611 Score = 30.8 bits (68), Expect = 4.7 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Frame = -2 Query: 665 RITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQ 486 R L++ +A +F ++ D + A KE ++I+E D Q +E+ Sbjct: 188 RAEKSLEKDAALFDEFVRENDCSSVQAMRAAEKETKAKIEKILEIRDLTTQIVNIKSEIS 247 Query: 485 RQEIEMNE-RVLEDF------EDWIEEEKNEGMFFKSLGKVKKPQNNEEI 357 R E + +V +DF ++W+EE++ + F K +V + + Sbjct: 248 RFEDTLKHYKVYKDFLYKLSPKEWLEEQEKKHSFLKKAKEVSEASKESSV 297
>ESSB_STAAW (Q7A1V2) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAU (P0C053) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAS (Q6GCI6) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAR (Q6GK25) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAN (Q7A7S0) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAM (Q99WU0) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAC (Q5HJ87) Protein essB| Length = 444 Score = 30.8 bits (68), Expect = 4.7 Identities = 31/120 (25%), Positives = 55/120 (45%) Frame = -2 Query: 650 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 471 LDE T + T+ +I N + E+ GD ++ + + Y + + Q+I Sbjct: 338 LDEAINIATYLDDNDITKLALI--NKLNEIKNNGDLSNDKRSEETKKYND----KLQDIL 391 Query: 470 MNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 291 E+ ++D + EEEK + K +K + EE + K K +AQK +E +E+ K Sbjct: 392 DKEKQVKDEKAKSEEEKAKA-------KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 30.8 bits (68), Expect = 4.7 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 29/136 (21%) Frame = -2 Query: 623 KFTKDADTEFDMIGQNAMKELDQIGDQ-------IMERLDSKMQSYEET---------AE 492 K KD D++ D E D+ GD+ +E L +K ++ EE AE Sbjct: 117 KSRKDRDSKKD--------EEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAE 168 Query: 491 MQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE------ 336 + + ++ ++ +E+ + +EEE+ + F+ LG+ ++ PQ E + + ++E Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGN 228 Query: 335 -----AQKVREIAEES 303 QK+RE ++S Sbjct: 229 EDEEGRQKIREEKDKS 244
>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC| 2.7.11.17) (CAM kinase-GR) (CaMK IV) Length = 469 Score = 30.8 bits (68), Expect = 4.7 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDS----KMQSYEETAEMQRQEIEMNERVLE 450 T+DA D++G+ M+E DQ DQ+ + K+QS E + +E E + V + Sbjct: 358 TQDAKDSTDLLGKK-MQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSSMVPQ 416 Query: 449 DFEDWIEEEKNE 414 D ED +E + E Sbjct: 417 DPEDELETDDPE 428
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 30.8 bits (68), Expect = 4.7 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNER---VLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 +++ + K + EE E ++ +I+M+++ ++ E +E+EK + + + +K + Sbjct: 162 VKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKK----QEKREKEKKKK 217 Query: 368 NEEIKVKAKIEAQKVREIAE 309 EE+K+ E VRE+AE Sbjct: 218 EEEVKIIYIPEVITVRELAE 237 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = -2 Query: 548 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 +++++ + K + +E +++++ E RV+E ++ +EEK E + K+K + Sbjct: 129 EELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKK 188 Query: 368 NEEI--KVKAKIEAQKVREIAEESAGSK 291 EI K++ +E +K ++ E K Sbjct: 189 EREIMRKLEHAVEKEKKKQEKREKEKKK 216
>DMD_PIG (Q5GN48) Dystrophin| Length = 3674 Score = 30.8 bits (68), Expect = 4.7 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 25/127 (19%) Frame = -2 Query: 614 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 465 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1804 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1863 Query: 464 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-------PQNNEEIK------VKAKIEAQ 330 ++ LE W + ++ K L ++K PQ+ ++IK K K E Sbjct: 1864 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPQDEKKIKEIDRELQKKKEELD 1923 Query: 329 KVREIAE 309 VR AE Sbjct: 1924 AVRRQAE 1930
>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)| (AH antigen) Length = 3210 Score = 30.8 bits (68), Expect = 4.7 Identities = 20/92 (21%), Positives = 41/92 (44%) Frame = -2 Query: 581 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 402 Q + ELD++ L+ K Q+ + E + +EM + L++ + + + Sbjct: 2319 QGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEIM 2378 Query: 401 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 306 K+ + P EE +++ IE + R A+E Sbjct: 2379 KATEQSLDPPIEEEHQLRNSIEKLRARLEADE 2410
>MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2| (Interferon-regulated resistance GTP-binding protein MxB) (p78-related protein) Length = 715 Score = 30.8 bits (68), Expect = 4.7 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 44/163 (26%) Frame = -2 Query: 713 QQEVLAKIAMLQTQKVRITNF---------LDERSAYLTKFTKDADTEFDM--------- 588 QQE+ ++++ + K IT F L+E SA + + + TE M Sbjct: 330 QQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLL 389 Query: 587 ------IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE--------------- 471 Q A +EL + G I + KM E +M Q+IE Sbjct: 390 EGQIRESHQKATEELRRCGADIPSQEADKMFFLIEKIKMFNQDIEKLVEGEEVVRENETR 449 Query: 470 MNERVLEDFEDWI-----EEEKNEGMFFKSLGKVKKPQNNEEI 357 + ++ EDF++W+ +K + + + + K +K +E+ Sbjct: 450 LYNKIREDFKNWVGILATNTQKVKNIIHEEVEKYEKQYRGKEL 492
>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2| Length = 886 Score = 30.8 bits (68), Expect = 4.7 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -2 Query: 533 RLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 354 RL+ + ++ +E AE++ ++ E + ED + +EE + K K+ + K Sbjct: 118 RLEEQQKAAQEAAELKAKQ-EAERKAKEDADRKAKEEAKRKADAERKAKQKQMTPEQSAK 176 Query: 353 V-KAKIEAQKVREIAEESAGSK 291 K +IEA+++++ AEE+A K Sbjct: 177 SEKDRIEAERLQKEAEEAALKK 198
>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 681 Score = 30.4 bits (67), Expect = 6.2 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -2 Query: 521 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 348 K+++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192 Query: 347 AKI 339 +I Sbjct: 193 KQI 195
>MYH10_RAT (Q9JLT0) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle| myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 30.4 bits (67), Expect = 6.2 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 1/150 (0%) Frame = -2 Query: 725 GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 546 GD+ + E+ K LQ + ++ L+E KF KDA Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGMKFAKDA-------------------- 1310 Query: 545 QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 L+S++Q +E E RQ++ ++ R+ + +EEEKN + Q Sbjct: 1311 ---AGLESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKNS----------LQEQQ 1352 Query: 368 NEEIKVKAKIEAQKVREIAEESAGSKTRMN 279 EE + + +E Q V + + A +K +++ Sbjct: 1353 EEEEEARKNLEKQ-VLALQSQLADTKKKVD 1381
>MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle| myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 30.4 bits (67), Expect = 6.2 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 1/150 (0%) Frame = -2 Query: 725 GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 546 GD+ + E+ K LQ + ++ L+E KF KDA Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDA-------------------- 1310 Query: 545 QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 369 L+S++Q +E E RQ++ ++ R+ + +EEEKN + Q Sbjct: 1311 ---AGLESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKNS----------LQEQQ 1352 Query: 368 NEEIKVKAKIEAQKVREIAEESAGSKTRMN 279 EE + + +E Q V + + A +K +++ Sbjct: 1353 EEEEEARKNLEKQ-VLALQSQLADTKKKVD 1381
>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens| fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H) Length = 665 Score = 30.4 bits (67), Expect = 6.2 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -2 Query: 563 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 450 L+Q E D ++Q Y E E R+EIE ERVLE Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286
>CE290_BOVIN (Q9TU23) Centrosomal protein Cep290| Length = 1453 Score = 30.4 bits (67), Expect = 6.2 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 +E L+ + S +E E +E+E+ + L E E+E G ++ K KK N E Sbjct: 72 LEHLECENVSLKEQMESINKELEITKEKLHTIEQAWEQETKLGN-ESNMDKAKKSVTNSE 130 Query: 359 I-KVKAKIEAQKVREIAE 309 I + KI +++E+ E Sbjct: 131 IVSISKKITMLEMKELNE 148
>LON_ECOLI (P0A9M0) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 30.4 bits (67), Expect = 6.2 Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQ------------TQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 579 D+R+QEVL + A+ Q + + N +D+ + T A + + Sbjct: 123 DEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLAD--TIAAHMPLKLADK 180 Query: 578 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE-DWIEEEKNEGM-- 408 ++ E+ + ERL+ M E ++ + E + RV + E E NE M Sbjct: 181 QSVLEMSDVN----ERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKA 236 Query: 407 FFKSLGKV-KKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANA 231 K LG++ P NE + K KI+A K+ + A+E A ++ + ++ M+ + Sbjct: 237 IQKELGEMDDAPDENEAL--KRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGY 294 Query: 230 VFATPEVEW 204 + +V W Sbjct: 295 IDWMVQVPW 303
>LON_ECOL6 (P0A9M1) ATP-dependent protease La (EC 3.4.21.53)| Length = 784 Score = 30.4 bits (67), Expect = 6.2 Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 16/189 (8%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQ------------TQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 579 D+R+QEVL + A+ Q + + N +D+ + T A + + Sbjct: 123 DEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLAD--TIAAHMPLKLADK 180 Query: 578 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE-DWIEEEKNEGM-- 408 ++ E+ + ERL+ M E ++ + E + RV + E E NE M Sbjct: 181 QSVLEMSDVN----ERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKA 236 Query: 407 FFKSLGKV-KKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANA 231 K LG++ P NE + K KI+A K+ + A+E A ++ + ++ M+ + Sbjct: 237 IQKELGEMDDAPDENEAL--KRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGY 294 Query: 230 VFATPEVEW 204 + +V W Sbjct: 295 IDWMVQVPW 303
>COT1_NEUCR (P38679) Serine/threonine-protein kinase cot-1 (EC 2.7.11.1)| (Colonial temperature-sensitive 1) Length = 598 Score = 30.4 bits (67), Expect = 6.2 Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Frame = -2 Query: 626 TKFTKDADTEFDMIGQNA---MKELDQIG-DQIMERLDSKMQSYEETAEMQRQEIEMNER 459 T+F + D G NA K+ Q+ D + + + + +EM+++ E N+ Sbjct: 125 TEFAPAPERNPDKYGPNANNNQKKCSQLASDFFKDSVKRARERNQRQSEMEQKLGETNDA 184 Query: 458 VLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAG 297 + W + EG + + L KP+N + IK+ K +V+ + +++ G Sbjct: 185 RRRE-SIWSTAGRKEGQYLRFLRTKDKPENYQTIKIIGKGAFGEVKLVQKKADG 237
>ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14)| Length = 159 Score = 30.4 bits (67), Expect = 6.2 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = -2 Query: 521 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 342 K + E A + + E E N +E+ K +G KVK + +EEI +AK Sbjct: 47 KADAQNEEARLLKVESEKN----------LEDSKLQGKTIVENYKVKAEKVSEEITAEAK 96 Query: 341 IEAQKVREIAE 309 EAQ + E A+ Sbjct: 97 TEAQNILERAK 107
>SYCP1_MOUSE (Q62209) Synaptonemal complex protein 1 (SCP-1)| Length = 993 Score = 30.4 bits (67), Expect = 6.2 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 540 QR ++ ++ ++ + + +N L+E +TKF + + E ++EL I + Sbjct: 393 QRLEKNEDQLKLITVELQKKSNELEE----MTKFKNNKEVE--------LEELKNILAED 440 Query: 539 MERLDSKMQSYEETAEMQRQE------IEMNERVLEDFEDWIEEEK-NEGMFFKSLGKVK 381 + LD K Q + E+Q +E +E E+ + D ++ + K +E + K + ++K Sbjct: 441 QKLLDEKKQVEKLAEELQEKEQELTFLLETREKEVHDLQEQVTVTKTSEQHYLKQVEEMK 500 Query: 380 KPQNNEEIK 354 E++K Sbjct: 501 TELEKEKLK 509
>DMD_CANFA (O97592) Dystrophin| Length = 3680 Score = 30.4 bits (67), Expect = 6.2 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Frame = -2 Query: 614 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 465 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1810 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1869 Query: 464 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 318 ++ LE W + ++ K L ++K P+ +E K+K E QK +E Sbjct: 1870 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1926
>KPC1_YEAST (P24583) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)| Length = 1151 Score = 30.4 bits (67), Expect = 6.2 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Frame = -2 Query: 719 QRQQEVLAKIAMLQTQ-KVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 543 ++ ++ K LQT + ++ F+DE AYL FT+ A + + K LD ++ Sbjct: 612 KQHDPIIDKKISLQTHGREKLNKFIDENEAYL-NFTEGAQQTAEF--SSPEKTLDPTSNR 668 Query: 542 ----IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 414 + + Q++E ++ R E+E+ + E+ E I+++ E Sbjct: 669 RSLGLTDLSIEHSQTWESKDDLMRDELELWKAQREEMELEIKQDSGE 715
>K2C4_RAT (Q6IG00) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)| (Keratin-4) (K4) (Type II keratin Kb4) Length = 536 Score = 30.4 bits (67), Expect = 6.2 Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Frame = -2 Query: 698 AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMER 531 A+ ++T + +F+D + +L + K +T+++++ Q + LD + + Sbjct: 145 AEREQIKTLNNKFASFID-KVRFLEQQNKVLETKWNLLQQQTTTTSPRNLDPFFETYINA 203 Query: 530 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 351 L + + + E+++ + +EDF+ EEE N+ ++ V K + + Sbjct: 204 LRKNLDTLSNDKGRLQSELKLMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMI 263 Query: 350 KAKIEAQKVREIAEE 306 K ++EA K+ + +E Sbjct: 264 KVELEA-KMESLKDE 277
>IE68_SHV21 (Q01042) Immediate-early protein| Length = 407 Score = 30.4 bits (67), Expect = 6.2 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = -2 Query: 506 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 327 EE E + +E E E E+ E+ EEE+ E + ++ EE + + EA++ Sbjct: 94 EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEE 153 Query: 326 VREIAEE 306 E AEE Sbjct: 154 AEEEAEE 160
>IOVO_TADRA (P68157) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_SARME (P68156) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_NEOJU (P68155) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_MERCU (P68154) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_LOPSP (P68153) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_DRONO (P05560) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 282 EYLPCTHGDTRSYNRKCRLCN 220 EY+P D+++YN KC CN Sbjct: 17 EYMPLCGSDSKTYNNKCDFCN 37
>IOVO_CYACY (P68152) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_COSCO (P05571) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_CHLPI (P68151) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANAPL (P68150) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANACA (P68149) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ALOAE (P68148) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXSP (P68145) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXGA (P68144) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 6.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IF2P_PYRAB (Q9UZK7) Probable translation initiation factor IF-2 [Contains: Pab| infB intein (Pab IF2 intein)] Length = 992 Score = 30.0 bits (66), Expect = 8.0 Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 18/128 (14%) Frame = -2 Query: 743 APXPHGGDQRQQEVLAKI--AMLQTQKVRI-------------TNFLDERSAYLTKFTKD 609 AP P ++ +QE+L +I ++ T KV + + L E+ + K Sbjct: 723 APTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVG 782 Query: 608 ADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFED 438 ++ D++ ++KE + I+ + EE A+ + +I + +++ED+E+ Sbjct: 783 NVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEE 842 Query: 437 WIEEEKNE 414 W++EE+ + Sbjct: 843 WVKEEEEK 850
>TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondrial precursor (EC| 5.99.1.3) Length = 1053 Score = 30.0 bits (66), Expect = 8.0 Identities = 28/118 (23%), Positives = 54/118 (45%) Frame = -2 Query: 596 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 417 FD G+ +KE I + E + + YE+ ++Q++E E +E+ ++IE N Sbjct: 898 FDRNGE--LKEFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTN 955 Query: 416 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLT 243 + +S+G+ +++ K + +V +A + SK YL M + LT Sbjct: 956 GTIEIRSMGR-------NQLEEKLQEMGFRVDPMATIAKNSKKANYGYLLEMPVSRLT 1006
>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 671 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -2 Query: 521 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 348 K++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182 Query: 347 AKI 339 +I Sbjct: 183 KQI 185
>SMC4_XENLA (P50532) Structural maintenance of chromosome 4| (Chromosome-associated protein C) (Chromosome assembly protein XCAP-C) Length = 1290 Score = 30.0 bits (66), Expect = 8.0 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Frame = -2 Query: 683 LQTQKVRITNFLDERSAYLTKFT-KDADTEFDMIGQNA-----MKELDQIGDQIMERLDS 522 ++ Q +IT F++E T+ +D DT + + K+L + +++ E + Sbjct: 366 VEKQLNKITKFIEENREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNV 425 Query: 521 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 342 S + AE E N++ L + + EEEK + + + + Q +E+K K Sbjct: 426 PANSQKIIAE------ETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEVKEKEL 479 Query: 341 IEAQK-VREIAEESAGSKTRMNIYLA 267 +E K V E + +++ ++IYL+ Sbjct: 480 MEISKTVNEARSKMDVAQSELDIYLS 505
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)| Length = 1969 Score = 30.0 bits (66), Expect = 8.0 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%) Frame = -2 Query: 572 MKELDQIGDQIMERL----DSKMQSYEETAEMQRQ--------EIEMNERVLEDFEDWIE 429 + +L+ + D+I+ R+ S+++SY AE++R+ ++ N R W Sbjct: 783 LAKLEDLRDEILSRIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTW-- 840 Query: 428 EEKNEGMFFKSLGKVK---KPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMA 258 +FK GKVK K +E + ++ QK+ E + +++++ +A + Sbjct: 841 ------EWFKLFGKVKPMLKAGKEQEAMGELAVKIQKLEEAVQRGEIARSQLESQVADL- 893 Query: 257 ILGLTIANAVFATPEVEWRKVA 192 + NA+F + E E +A Sbjct: 894 ---VEEKNALFLSLETEKANLA 912
>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)| Length = 302 Score = 30.0 bits (66), Expect = 8.0 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 5/116 (4%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 438 T++A E Q A EL D + S Q ++ A +E + E + + Sbjct: 43 TEEATDEHHSRTQQAKDELKSKADHAANEVKSNTQQAKDRASEVGKEAK---EYTESWTE 99 Query: 437 WIEEEKNEGMFFKS----LGKVKKPQNN-EEIKVKAKIEAQKVREIAEESAGSKTR 285 W +E+ +EG+ FK G V+K ++ + K K + Q + A E + K + Sbjct: 100 WAKEKISEGLGFKQDDDPKGSVEKAFDSVADTATKTKDKLQDMASGAGEYSAGKAK 155
>IOVO_GALCH (P68379) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 8.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>IOVO_FULAT (P68378) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 8.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 318 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 220 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 30.0 bits (66), Expect = 8.0 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Frame = -2 Query: 581 QNAMKELDQIGDQI--MER----LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 420 Q +KE DQ+ + ME+ L + + +E E R+ E ++ +ED+ I +E Sbjct: 702 QKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEG 761 Query: 419 NEGMFFKSLGKVKKPQNNEEI-KVKAKIEAQKVREIAEESAGSKTRMNI 276 K+ + K NEEI +V++K +A+ +A +++ K +M I Sbjct: 762 QRYQALKAHAEEKLQLANEEIAQVRSKAQAE---ALALQASLRKEQMRI 807
>ENGA_CHRVO (Q7NS92) GTP-binding protein engA| Length = 469 Score = 30.0 bits (66), Expect = 8.0 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -2 Query: 473 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 294 E+ E VLE F D +EEE + F +G +P + V A + ++V IA + AG+ Sbjct: 154 ELMELVLEGFPDEVEEEDSRHPKFAVIG---RPNVGKSTLVNAILGEERV--IAFDQAGT 208 Query: 293 KTRMNIYL 270 TR +IY+ Sbjct: 209 -TRDSIYI 215
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = -2 Query: 473 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK--VKAKIEAQKVREIAEES 303 E+ E L+ F+D+ +E+ K LG K NN E+K + ++AQ+ EI E++ Sbjct: 244 EVKETRLKLFKDYFVDER------KKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDN 296
>CING_XENLA (Q9PTD7) Cingulin| Length = 1360 Score = 30.0 bits (66), Expect = 8.0 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -2 Query: 557 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKV 384 Q+ D++ +R+ + A MQR EIE+ E E ++ E++KNE + S + Sbjct: 451 QLDDEMKQRMKLETSQGRPKAGMQRLEIELEESKEECSRLKELYEKKKNE-LSAMSQELM 509 Query: 383 KKPQNNEEIKVKAKIEAQKVREIAEE 306 + E+++ K + K+ + EE Sbjct: 510 EVRMGKEQVETKLRTMEDKLMDSKEE 535
>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1191 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 359 IKVKAKIEAQKVREIAEESAGS 294 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>DMD_HUMAN (P11532) Dystrophin| Length = 3685 Score = 30.0 bits (66), Expect = 8.0 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Frame = -2 Query: 614 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 465 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1808 KEEDFNKDMNEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1867 Query: 464 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 318 ++ LE W + ++ K L ++K P+ +E K+K E QK +E Sbjct: 1868 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1924
>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:| Caspase-8 subunit p18; Caspase-8 subunit p10] Length = 480 Score = 30.0 bits (66), Expect = 8.0 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -2 Query: 590 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 456 M+ +N ++ L I DQ+ + L K++ YE ++ +R +E E + Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195
>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC| 2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin) Length = 474 Score = 30.0 bits (66), Expect = 8.0 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Frame = -2 Query: 557 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMF 405 Q G + L++KMQ+ +ET ++Q +E+E E V E+ E+ EEE+ M Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRMV 418 Query: 404 FKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 294 PQ E+ + + + Q+++ +EE+ S Sbjct: 419 ---------PQEPED---RLETDDQEMKRNSEETLKS 443
>FRPC_NEIMC (P55127) Iron-regulated protein frpC| Length = 1829 Score = 30.0 bits (66), Expect = 8.0 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 447 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
>FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC| Length = 1829 Score = 30.0 bits (66), Expect = 8.0 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 447 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
>CE290_HUMAN (O15078) Centrosomal protein Cep290| Length = 1539 Score = 30.0 bits (66), Expect = 8.0 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 +E L+ + S +E E +E+E+ + L E E+E G S+ K KK N + Sbjct: 53 LEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGN-ESSMDKAKKSITNSD 111 Query: 359 I-KVKAKIEAQKVREIAE 309 I + KI +++E+ E Sbjct: 112 IVSISKKITMLEMKELNE 129
>SOJO_XENLA (Q9PW73) Cytoskeletal protein Sojo (p170)| Length = 1335 Score = 30.0 bits (66), Expect = 8.0 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 13/135 (9%) Frame = -2 Query: 722 DQRQQEVLAKIAMLQTQKVRIT-------NFLDERSAYLTKFTKDADTEFDMIGQNAMKE 564 +Q+ +++ K+ LQ Q + N +D LTK IG AM+ Sbjct: 104 EQQNRQLKEKLNFLQEQNASLVSQNHSLMNKIDCVQTELTKSRSRIRYVESAIGARAMR- 162 Query: 563 LDQIGDQIM------ERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 402 L + ++I+ + ++ +++ E+ E R + ER+L+ F+D ++ K E Sbjct: 163 LPDLEERILTLEAKADAQENALRTTEDQLEHSRHILAEKERILQMFKDEMKALKEELFAS 222 Query: 401 KSLGKVKKPQNNEEI 357 L K + Q NE + Sbjct: 223 CRLCKRTEKQRNEAL 237
>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1217 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 359 IKVKAKIEAQKVREIAEESAGS 294 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) (Mad member-interacting protein 1) Length = 1217 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 359 IKVKAKIEAQKVREIAEESAGS 294 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1217 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 359 IKVKAKIEAQKVREIAEESAGS 294 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>FRPA_NEIMC (P55126) Iron-regulated protein frpA| Length = 1115 Score = 30.0 bits (66), Expect = 8.0 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -2 Query: 617 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 447 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 366 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 424
>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) (Fragments) Length = 1027 Score = 30.0 bits (66), Expect = 8.0 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -2 Query: 596 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 417 F Q +KE Q+ +I+ D K + +EE + ++ E E + D+E E K Sbjct: 426 FQATTQGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYETEMFDYEQLSELLKK 482 Query: 416 EGMFFKSLGKVKKPQ 372 + F++++ KV +P+ Sbjct: 483 QAQFYENIVKVIRPK 497
>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1218 Score = 30.0 bits (66), Expect = 8.0 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -2 Query: 539 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 360 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 359 IKVKAKIEAQKVREIAEESAGS 294 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 30.0 bits (66), Expect = 8.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = -1 Query: 378 TSKQ*GNQGEGQDRSTEGQRDCRGECGVKNSDEYLPCTHGDTRSYNRKC-RLCNTRGGME 202 TS + G G + + + C+ +C +D+ L C H DT Y+ C + C R E Sbjct: 860 TSCEDGEYGTEEGKCEDCNIICK-KCNGSQADQCLEC-HHDTNLYDTTCVQYCGNRRYPE 917 Query: 201 EGCCSGSNFHWPGCSG 154 G C + GC G Sbjct: 918 NGECHPCHPSCLGCIG 933
>K1C13_MOUSE (P08730) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)| (Keratin-13) (K13) (47 kDa cytokeratin) Length = 437 Score = 30.0 bits (66), Expect = 8.0 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 2/160 (1%) Frame = -2 Query: 710 QEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMER 531 + VL ++ + +T L+E AYL K ++ EF +Q+ Q+ Sbjct: 204 RRVLDELTLAKTDLEMQIESLNEELAYLKKNHEEEMKEFS----------NQVVGQVNVE 253 Query: 530 LDSK--MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 357 +D+ + AEM+ Q + E+ D E+W + KS K+ +N E+ Sbjct: 254 MDATPGIDLTRVLAEMREQYEALAEKNRRDAEEWFQT--------KSAELNKEVSSNAEM 305 Query: 356 KVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIA 237 +K E ++R + G + + L++ A L T+A Sbjct: 306 IQTSKTEITELRRTLQ---GLEIELQSQLSMKAGLESTLA 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,863,403 Number of Sequences: 219361 Number of extensions: 1866798 Number of successful extensions: 7538 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 7053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7517 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7932903580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
