ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481225.1| Oryza sativa (japonica cultivar-group), mRNA 418 e-114
2dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
3gb|AY110255.1| Zea mays CL3925_1 mRNA sequence 359 7e-96
4ref|XM_463898.1| Oryza sativa (japonica cultivar-group), mRNA 345 1e-91
5ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group... 345 1e-91
6dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
7dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
11dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
12dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
14dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
15ref|NM_186306.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
16gb|BT014149.1| Lycopersicon esculentum clone 133268F, mRNA sequence 86 2e-13
17ref|NM_106607.3| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLANTS ... 66 1e-07
18ref|NM_001036224.1| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLAN... 66 1e-07
19gb|BT006106.1| Arabidopsis thaliana clone U20738 unknown protein... 66 1e-07
20gb|AF355756.1|AF355756 Arabidopsis thaliana syntaxin of plants 5... 66 1e-07
21gb|BT003941.1| Arabidopsis thaliana clone RAFL15-10-B09 (R20738)... 66 1e-07
22gb|AY086285.1| Arabidopsis thaliana clone 23407 mRNA, complete s... 62 2e-06
23emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 ... 62 2e-06
24emb|BX813633.1|CNS0AEK0 Arabidopsis thaliana Full-length cDNA Co... 48 0.033
25ref|NM_101490.2| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS ... 46 0.13
26ref|NM_001035977.1| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLAN... 46 0.13
27gb|AY097382.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, compl... 46 0.13
28gb|AY074863.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, compl... 46 0.13
29gb|AF355755.1|AF355755 Arabidopsis thaliana syntaxin of plants 5... 46 0.13
30emb|BX818553.1|CNS0AEBX Arabidopsis thaliana Full-length cDNA Co... 46 0.13
31emb|BX816781.1|CNS0ADA0 Arabidopsis thaliana Full-length cDNA Co... 46 0.13
32emb|BX818248.1|CNS0ACLC Arabidopsis thaliana Full-length cDNA Co... 46 0.13
33gb|AY085320.1| Arabidopsis thaliana clone 145295 mRNA, complete ... 46 0.13
34gb|AC139849.5| Mus musculus BAC clone RP23-84M17 from chromosome... 44 0.52
35gb|AC129199.3| Mus musculus BAC clone RP24-220I4 from 7, complet... 44 0.52
36gb|AC166158.3| Mus musculus BAC clone RP24-244P14 from chromosom... 42 2.1
37gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complet... 42 2.1
38gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, co... 40 8.1
39emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on ch... 40 8.1
40emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 ... 40 8.1
41emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 m... 40 8.1
42gb|AC099501.2| Homo sapiens chromosome 5 clone RP11-20O13, compl... 40 8.1
43emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in... 40 8.1
44gb|AC114980.2| Homo sapiens chromosome 5 clone RP11-549J18, comp... 40 8.1
45dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-3... 40 8.1
46dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-1... 40 8.1
47dbj|AP006271.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-1... 40 8.1
48dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
49dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.1
50gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 8.1
51emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-3... 40 8.1
52gb|AC154196.1| Mus musculus BAC clone RP24-76I6 from 16, complet... 40 8.1
53emb|CT010571.7| Mouse DNA sequence from clone RP23-300L8 on chro... 40 8.1
54dbj|AP001067.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.1 
>ref|XM_481225.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1211

 Score =  418 bits (211), Expect = e-114
 Identities = 325/363 (89%)
 Strand = Plus / Minus

                                                                       
Query: 234 tacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacagagagcatt 293
           |||||||| |||||||| || ||||| || || | |||||| ||| | ||||| ||||  
Sbjct: 966 tacttgataagaagccacacgataacagcaaggatcactattgcgacgacagatagcagc 907

                                                                       
Query: 294 aggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgc 353
           |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 906 aggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcctcttttgc 847

                                                                       
Query: 354 acacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaatcaatcgt 413
           |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||  
Sbjct: 846 acacgctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatcaatcaatctc 787

                                                                       
Query: 414 gtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcaggactgtc 473
           |||||||| |||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 786 gtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtactcaggactgtc 727

                                                                       
Query: 474 tcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaaggccaaca 533
           || |||||| | || ||||| |||||||||||| |||||| |||||||||||||||||||
Sbjct: 726 tcttccagcttctcaagaccttcatcttgttctttcataatttgcctctgaaggccaaca 667

                                                                       
Query: 534 atcccttggttgtctaacccagcaactctgctcatatcatcagctgctttcttactctga 593
           ||||||||||| || || ||||||||||||||||||||||||||||| |||||  |||||
Sbjct: 666 atcccttggttatccaaaccagcaactctgctcatatcatcagctgccttcttgttctga 607

              
Query: 594 cca 596
           |||
Sbjct: 606 cca 604
to top
>dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F24, full
           insert sequence
          Length = 1212

 Score =  418 bits (211), Expect = e-114
 Identities = 325/363 (89%)
 Strand = Plus / Minus

                                                                       
Query: 234 tacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacagagagcatt 293
           |||||||| |||||||| || ||||| || || | |||||| ||| | ||||| ||||  
Sbjct: 966 tacttgataagaagccacacgataacagcaaggatcactattgcgacgacagatagcagc 907

                                                                       
Query: 294 aggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgc 353
           |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 906 aggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcctcttttgc 847

                                                                       
Query: 354 acacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaatcaatcgt 413
           |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||  
Sbjct: 846 acacgctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatcaatcaatctc 787

                                                                       
Query: 414 gtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcaggactgtc 473
           |||||||| |||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 786 gtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtactcaggactgtc 727

                                                                       
Query: 474 tcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaaggccaaca 533
           || |||||| | || ||||| |||||||||||| |||||| |||||||||||||||||||
Sbjct: 726 tcttccagcttctcaagaccttcatcttgttctttcataatttgcctctgaaggccaaca 667

                                                                       
Query: 534 atcccttggttgtctaacccagcaactctgctcatatcatcagctgctttcttactctga 593
           ||||||||||| || || ||||||||||||||||||||||||||||| |||||  |||||
Sbjct: 666 atcccttggttatccaaaccagcaactctgctcatatcatcagctgccttcttgttctga 607

              
Query: 594 cca 596
           |||
Sbjct: 606 cca 604
to top
>gb|AY110255.1| Zea mays CL3925_1 mRNA sequence
          Length = 993

 Score =  359 bits (181), Expect = 7e-96
 Identities = 307/349 (87%)
 Strand = Plus / Minus

                                                                       
Query: 226 tttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacag 285
           ||||||| ||||||| ||||||||||||||| || || || | ||| |||||  | ||||
Sbjct: 727 tttacagatacttgacgagaagccaaacaatgactgcaagaatcacaatggcaacgacag 668

                                                                       
Query: 286 agagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagcc 345
           | || |  |||||| |||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 667 ataggagcaggcacgtgcatgagcaaccacctttggtgcgcttgttcagaattgcaagcc 608

                                                                       
Query: 346 gcttttgcacacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaa 405
            ||||||||||||||||||||| || |||||||| || ||||||||||| | |||||| |
Sbjct: 607 tcttttgcacacgctgaagacgtgaatttgtaacatcaacatgatcttcaaggtcatcta 548

                                                                       
Query: 406 tcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctca 465
           |||||| ||| ||||| |||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 547 tcaatcttgtgtgcagggtaagttcttcattgactgctaatgcaatatgcttcgtgctca 488

                                                                       
Query: 466 ggactgtctcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaa 525
           | |||||||| |||||| | ||||||||||||||||| ||| |||||| |||||||||||
Sbjct: 487 gcactgtctcttccagcttctcgagaccctcatcttgctctttcataatttgcctctgaa 428

                                                            
Query: 526 ggccaacaatcccttggttgtctaacccagcaactctgctcatatcatc 574
           |||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 427 ggccaacaattccttggttatctaacccagcaactctgctcatgtcatc 379
to top
>ref|XM_463898.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1049

 Score =  345 bits (174), Expect = 1e-91
 Identities = 321/370 (86%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
           |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 854 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 795

                                                                       
Query: 287 gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
            | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 794 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 735

                                                                       
Query: 347 cttttgcacacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaat 406
           ||||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||||||||
Sbjct: 734 cttttgcacgcgctgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaat 675

                                                                       
Query: 407 caatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcag 466
           ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||
Sbjct: 674 caatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgctcag 615

                                                                       
Query: 467 gactgtctcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaag 526
            |||||||| |||||| | || |||||||||||||||||| |||||||||||||||||||
Sbjct: 614 tactgtctcttccagcttctcaagaccctcatcttgttctttcataacttgcctctgaag 555

                                                                       
Query: 527 gccaacaatcccttggttgtctaacccagcaactctgctcatatcatcagctgctttctt 586
              ||| || |||||||| || || ||||| ||||| |||||||||||||||||||||||
Sbjct: 554 tgaaacgattccttggttatccaaaccagctactctactcatatcatcagctgctttctt 495

                     
Query: 587 actctgacca 596
           ||||||||||
Sbjct: 494 actctgacca 485
to top
>ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1217_F02.19
           mRNA
          Length = 1130

 Score =  345 bits (174), Expect = 1e-91
 Identities = 321/370 (86%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
           |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 844 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 785

                                                                       
Query: 287 gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
            | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 784 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 725

                                                                       
Query: 347 cttttgcacacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaat 406
           ||||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||||||||
Sbjct: 724 cttttgcacgcgctgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaat 665

                                                                       
Query: 407 caatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcag 466
           ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||
Sbjct: 664 caatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgctcag 605

                                                                       
Query: 467 gactgtctcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaag 526
            |||||||| |||||| | || |||||||||||||||||| |||||||||||||||||||
Sbjct: 604 tactgtctcttccagcttctcaagaccctcatcttgttctttcataacttgcctctgaag 545

                                                                       
Query: 527 gccaacaatcccttggttgtctaacccagcaactctgctcatatcatcagctgctttctt 586
              ||| || |||||||| || || ||||| ||||| |||||||||||||||||||||||
Sbjct: 544 tgaaacgattccttggttatccaaaccagctactctactcatatcatcagctgctttctt 485

                     
Query: 587 actctgacca 596
           ||||||||||
Sbjct: 484 actctgacca 475
to top
>dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H09, full
           insert sequence
          Length = 1130

 Score =  345 bits (174), Expect = 1e-91
 Identities = 321/370 (86%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
           |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 844 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 785

                                                                       
Query: 287 gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
            | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 784 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 725

                                                                       
Query: 347 cttttgcacacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaat 406
           ||||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||||||||
Sbjct: 724 cttttgcacgcgctgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaat 665

                                                                       
Query: 407 caatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcag 466
           ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||
Sbjct: 664 caatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgctcag 605

                                                                       
Query: 467 gactgtctcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaag 526
            |||||||| |||||| | || |||||||||||||||||| |||||||||||||||||||
Sbjct: 604 tactgtctcttccagcttctcaagaccctcatcttgttctttcataacttgcctctgaag 545

                                                                       
Query: 527 gccaacaatcccttggttgtctaacccagcaactctgctcatatcatcagctgctttctt 586
              ||| || |||||||| || || ||||| ||||| |||||||||||||||||||||||
Sbjct: 544 tgaaacgattccttggttatccaaaccagctactctactcatatcatcagctgctttctt 485

                     
Query: 587 actctgacca 596
           ||||||||||
Sbjct: 484 actctgacca 475
to top
>dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D08, full
           insert sequence
          Length = 1049

 Score =  345 bits (174), Expect = 1e-91
 Identities = 321/370 (86%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
           |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 854 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 795

                                                                       
Query: 287 gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
            | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 794 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 735

                                                                       
Query: 347 cttttgcacacgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaat 406
           ||||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||||||||
Sbjct: 734 cttttgcacgcgctgaagacgtgagtttgtaacatcaacataatcatccaaatcatcaat 675

                                                                       
Query: 407 caatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcag 466
           ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||
Sbjct: 674 caatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgctcag 615

                                                                       
Query: 467 gactgtctcctccagcctttcgagaccctcatcttgttctctcataacttgcctctgaag 526
            |||||||| |||||| | || |||||||||||||||||| |||||||||||||||||||
Sbjct: 614 tactgtctcttccagcttctcaagaccctcatcttgttctttcataacttgcctctgaag 555

                                                                       
Query: 527 gccaacaatcccttggttgtctaacccagcaactctgctcatatcatcagctgctttctt 586
              ||| || |||||||| || || ||||| ||||| |||||||||||||||||||||||
Sbjct: 554 tgaaacgattccttggttatccaaaccagctactctactcatatcatcagctgctttctt 495

                     
Query: 587 actctgacca 596
           ||||||||||
Sbjct: 494 actctgacca 485
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Minus

                                                                            
Query: 234      tacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacagagagcatt 293
                |||||||| |||||||| || ||||| || || | |||||| ||| | ||||| ||||  
Sbjct: 10756848 tacttgataagaagccacacgataacagcaaggatcactattgcgacgacagatagcagc 10756789

                                                                            
Query: 294      aggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgc 353
                |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 10756788 aggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcctcttttgc 10756729

                        
Query: 354      acacgctg 361
                ||||||||
Sbjct: 10756728 acacgctg 10756721



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                            
Query: 508      tcataacttgcctctgaaggccaacaatcccttggttgtctaacccagcaactctgctca 567
                |||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 10756130 tcataatttgcctctgaaggccaacaatcccttggttatccaaaccagcaactctgctca 10756071

                                             
Query: 568      tatcatcagctgctttcttactctgacca 596
                ||||||||||||| |||||  ||||||||
Sbjct: 10756070 tatcatcagctgccttcttgttctgacca 10756042



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 403      caatcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgc 462
                |||||||||  |||||||| |||||||||||||| |||||||| || ||||||||||| |
Sbjct: 10756484 caatcaatctcgtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtac 10756425

                                                            
Query: 463      tcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
                ||||||||||||| |||||| | || ||||| ||||||||||||
Sbjct: 10756424 tcaggactgtctcttccagcttctcaagaccttcatcttgttct 10756381



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 359      ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatc 403
                ||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 10756607 ctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatc 10756563



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 231      aggtacttgatgagaagcca 250
                ||||||||||||||||||||
Sbjct: 17778039 aggtacttgatgagaagcca 17778058
to top
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Minus

                                                                         
Query: 234   tacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacagagagcatt 293
             |||||||| |||||||| || ||||| || || | |||||| ||| | ||||| ||||  
Sbjct: 53980 tacttgataagaagccacacgataacagcaaggatcactattgcgacgacagatagcagc 53921

                                                                         
Query: 294   aggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgc 353
             |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 53920 aggcacatgcatgagcagccacctttggtgcgcttgttcagaattgcaagcctcttttgc 53861

                     
Query: 354   acacgctg 361
             ||||||||
Sbjct: 53860 acacgctg 53853



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                         
Query: 508   tcataacttgcctctgaaggccaacaatcccttggttgtctaacccagcaactctgctca 567
             |||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 53262 tcataatttgcctctgaaggccaacaatcccttggttatccaaaccagcaactctgctca 53203

                                          
Query: 568   tatcatcagctgctttcttactctgacca 596
             ||||||||||||| |||||  ||||||||
Sbjct: 53202 tatcatcagctgccttcttgttctgacca 53174



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                         
Query: 403   caatcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgc 462
             |||||||||  |||||||| |||||||||||||| |||||||| || ||||||||||| |
Sbjct: 53616 caatcaatctcgtatgcagggtaagttcttcattgactgctaaagcgatatgttttgtac 53557

                                                         
Query: 463   tcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
             ||||||||||||| |||||| | || ||||| ||||||||||||
Sbjct: 53556 tcaggactgtctcttccagcttctcaagaccttcatcttgttct 53513



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 359   ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatc 403
             ||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 53739 ctgaagacgcgagtttgtaacatcaacatgatcttccaagtcatc 53695
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                           
Query: 403     caatcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgc 462
               ||||||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||
Sbjct: 1022749 caatcaatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgc 1022808

                                                           
Query: 463     tcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
               |||| |||||||| |||||| | || ||||||||||||||||||
Sbjct: 1022809 tcagtactgtctcttccagcttctcaagaccctcatcttgttct 1022852



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                           
Query: 508     tcataacttgcctctgaaggccaacaatcccttggttgtctaacccagcaactctgctca 567
               |||||||||||||||||||   ||| || |||||||| || || ||||| ||||| ||||
Sbjct: 1023105 tcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctactca 1023164

                                            
Query: 568     tatcatcagctgctttcttactctgacca 596
               |||||||||||||||||||||||||||||
Sbjct: 1023165 tatcatcagctgctttcttactctgacca 1023193



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                           
Query: 227     ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
               |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 1022387 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 1022446

                                                                           
Query: 287     gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
                | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 1022447 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 1022506

                                
Query: 347     cttttgcacacgctgaa 363
               ||||||||| |||||||
Sbjct: 1022507 cttttgcacgcgctgaa 1022523



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 359     ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatc 403
               ||||||||| ||||||||||| || |||| ||| ||||| |||||
Sbjct: 1022627 ctgaagacgtgagtttgtaacatcaacataatcatccaaatcatc 1022671
to top
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0088N06
          Length = 123454

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 403   caatcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgc 462
             ||||||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||
Sbjct: 11457 caatcaatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgc 11516

                                                         
Query: 463   tcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
             |||| |||||||| |||||| | || ||||||||||||||||||
Sbjct: 11517 tcagtactgtctcttccagcttctcaagaccctcatcttgttct 11560



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 508   tcataacttgcctctgaaggccaacaatcccttggttgtctaacccagcaactctgctca 567
             |||||||||||||||||||   ||| || |||||||| || || ||||| ||||| ||||
Sbjct: 11813 tcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctactca 11872

                                          
Query: 568   tatcatcagctgctttcttactctgacca 596
             |||||||||||||||||||||||||||||
Sbjct: 11873 tatcatcagctgctttcttactctgacca 11901



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                         
Query: 227   ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
             |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 11095 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 11154

                                                                         
Query: 287   gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
              | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 11155 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 11214

                              
Query: 347   cttttgcacacgctgaa 363
             ||||||||| |||||||
Sbjct: 11215 cttttgcacgcgctgaa 11231



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 359   ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatc 403
             ||||||||| ||||||||||| || |||| ||| ||||| |||||
Sbjct: 11335 ctgaagacgtgagtttgtaacatcaacataatcatccaaatcatc 11379
to top
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1217_F02
          Length = 118822

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 403   caatcaatcgtgtatgcagagtaagttcttcattcactgctaatgcaatatgttttgtgc 462
             ||||||||| ||||||||| |||||||||||||| |||||||  ||||||||||||||||
Sbjct: 94168 caatcaatcttgtatgcagggtaagttcttcattgactgctagagcaatatgttttgtgc 94227

                                                         
Query: 463   tcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
             |||| |||||||| |||||| | || ||||||||||||||||||
Sbjct: 94228 tcagtactgtctcttccagcttctcaagaccctcatcttgttct 94271



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 508   tcataacttgcctctgaaggccaacaatcccttggttgtctaacccagcaactctgctca 567
             |||||||||||||||||||   ||| || |||||||| || || ||||| ||||| ||||
Sbjct: 94524 tcataacttgcctctgaagtgaaacgattccttggttatccaaaccagctactctactca 94583

                                          
Query: 568   tatcatcagctgctttcttactctgacca 596
             |||||||||||||||||||||||||||||
Sbjct: 94584 tatcatcagctgctttcttactctgacca 94612



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                         
Query: 227   ttacaggtacttgatgagaagccaaacaataaccgcgagcagcactatggcggcaacaga 286
             |||||||| |||||||||||||||| |||| ||||| || | |||||| ||  | |||||
Sbjct: 93806 ttacaggtgcttgatgagaagccaagcaatgaccgcaagaaacactatagcaacgacaga 93865

                                                                         
Query: 287   gagcattaggcacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccg 346
              | ||  |||  |||||| ||||||||||||||| ||||||| |||||||| ||||||| 
Sbjct: 93866 tatcagcagggccatgcacgagcagccacctttgacgcgcttattcagaatagcaagcct 93925

                              
Query: 347   cttttgcacacgctgaa 363
             ||||||||| |||||||
Sbjct: 93926 cttttgcacgcgctgaa 93942



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 359   ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatc 403
             ||||||||| ||||||||||| || |||| ||| ||||| |||||
Sbjct: 94046 ctgaagacgtgagtttgtaacatcaacataatcatccaaatcatc 94090
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 98/113 (86%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                           
Query: 299     catgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgcacacg 358
               |||||||||||||||||||||| ||||||| |||||||| ||||||| | ||||||| ||
Sbjct: 2394289 catgcatgagcagccacctttgacgcgcttattcagaatggcaagcctc-tttgcacgcg 2394231

                                                                    
Query: 359     ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaatcaatc 411
               ||||||||| ||||| ||||| || || ||||| || || || ||||||||||
Sbjct: 2394230 ctgaagacgtgagttcgtaacatcaacgtgatcatctaaatcgtcaatcaatc 2394178



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                           
Query: 446     tgcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttc 505
               ||||||||||||||||||||| |||||||| |||||| | || |||||||||||||||||
Sbjct: 2394176 tgcaatatgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttc 2394117

                                    
Query: 506     tctcataacttgcctctgaag 526
               | || ||||||| ||||||||
Sbjct: 2394116 tttcgtaacttgactctgaag 2394096
to top
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077B15
          Length = 139345

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 98/113 (86%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                         
Query: 299   catgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgcacacg 358
             |||||||||||||||||||||| ||||||| |||||||| ||||||| | ||||||| ||
Sbjct: 97297 catgcatgagcagccacctttgacgcgcttattcagaatggcaagcctc-tttgcacgcg 97239

                                                                  
Query: 359   ctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaatcaatc 411
             ||||||||| ||||| ||||| || || ||||| || || || ||||||||||
Sbjct: 97238 ctgaagacgtgagttcgtaacatcaacgtgatcatctaaatcgtcaatcaatc 97186



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                         
Query: 446   tgcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttc 505
             ||||||||||||||||||||| |||||||| |||||| | || |||||||||||||||||
Sbjct: 97184 tgcaatatgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttc 97125

                                  
Query: 506   tctcataacttgcctctgaag 526
             | || ||||||| ||||||||
Sbjct: 97124 tttcgtaacttgactctgaag 97104
to top
>ref|NM_186306.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1068

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                       
Query: 446 tgcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttc 505
           ||||||||||||||||||||| |||||||| |||||| | || |||||||||||||||||
Sbjct: 987 tgcaatatgttttgtgctcagtactgtctcttccagcttctcaagaccctcatcttgttc 928

                       
Query: 506 tctcataacttg 517
           | || |||||||
Sbjct: 927 tttcgtaacttg 916



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 68/81 (83%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                        
Query: 331  tcagaattgcaagccgcttttgcacacgctgaagacgggagtttgtaacgtcgacatgat 390
            ||||||| ||||||| |||| |||| ||||||||||| ||||| ||||| || || ||||
Sbjct: 1068 tcagaatggcaagcctcttt-gcacgcgctgaagacgtgagttcgtaacatcaacgtgat 1010

                                 
Query: 391  cttccaagtcatcaatcaatc 411
            | || || || ||||||||||
Sbjct: 1009 catctaaatcgtcaatcaatc 989
to top
>gb|BT014149.1| Lycopersicon esculentum clone 133268F, mRNA sequence
          Length = 1070

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 178/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 297 cacatgcatgagcagccacctttggcgcgcttgttcagaattgcaagccgcttttgcaca 356
           |||||||| ||||| ||||| || | ||| ||||||| |||| |||||    | ||||| 
Sbjct: 793 cacatgcaagagcaaccaccctttgtgcgtttgttcaaaattccaagctttctctgcacc 734

                                                                       
Query: 357 cgctgaagacgggagtttgtaacgtcgacatgatcttccaagtcatcaatcaatcgtgta 416
           |||||||| |  |||| |||||| || ||||| || |||| ||||||||| | || ||| 
Sbjct: 733 cgctgaagtcttgagtctgtaacatcaacatgttcgtccaggtcatcaataagtcttgtt 674

                                                                       
Query: 417 tgcagagtaagttcttcattcactgctaatgcaatatgttttgtgctcaggactgtctcc 476
           ||||    |||||||||||| ||||| | ||| |||||||| |||||||  |||||||||
Sbjct: 673 tgcaagccaagttcttcattaactgccagtgctatatgtttagtgctcatcactgtctcc 614

                                                      
Query: 477 tccagcctttcgagaccctcatcttgttctctcataacttgcc 519
           ||||| || || || ||||||||||| ||| |||||| |||||
Sbjct: 613 tccagactctcaaggccctcatcttgctctttcataatttgcc 571
to top
>ref|NM_106607.3| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLANTS 52) AT1G79590
           (SYP52) transcript variant AT1G79590.1 mRNA, complete
           cds
          Length = 1137

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| |||||||||
Sbjct: 658 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgttct 599

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 598 ctcataacttgccgttgaaatacaacaattccttggttgtc 558
to top
>ref|NM_001036224.1| Arabidopsis thaliana SYP52 (SYNTAXIN OF PLANTS 52) AT1G79590
           (SYP52) transcript variant AT1G79590.2 mRNA, complete
           cds
          Length = 1302

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| |||||||||
Sbjct: 612 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgttct 553

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 552 ctcataacttgccgttgaaatacaacaattccttggttgtc 512
to top
>gb|BT006106.1| Arabidopsis thaliana clone U20738 unknown protein (At1g79590) mRNA,
           complete cds
          Length = 733

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| |||||||||
Sbjct: 482 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgttct 423

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 422 ctcataacttgccgttgaaatacaacaattccttggttgtc 382
to top
>gb|AF355756.1|AF355756 Arabidopsis thaliana syntaxin of plants 52 (SYP52) mRNA, complete
           cds
          Length = 1134

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| |||||||||
Sbjct: 658 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgttct 599

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 598 ctcataacttgccgttgaaatacaacaattccttggttgtc 558
to top
>gb|BT003941.1| Arabidopsis thaliana clone RAFL15-10-B09 (R20738) unknown protein
           (At1g79590) mRNA, complete cds
          Length = 1135

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| |||||||||
Sbjct: 640 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgttct 581

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 580 ctcataacttgccgttgaaatacaacaattccttggttgtc 540
to top
>gb|AY086285.1| Arabidopsis thaliana clone 23407 mRNA, complete sequence
          Length = 1117

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcaatatgttttgtgctcaggactgtctcctccagcctttcgagaccctcatcttgttct 506
           ||||| ||||| || |||| |||||| ||||||| | | || || ||||| ||||| |||
Sbjct: 640 gcaatgtgtttggtactcatgactgtttcctccaacttctcaagtccctcgtcttgktct 581

                                                    
Query: 507 ctcataacttgcctctgaaggccaacaatcccttggttgtc 547
           |||||||||||||  ||||   ||||||| |||||||||||
Sbjct: 580 ctcataacttgccgttgaaatacaacaattccttggttgtc 540
to top
>emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 on chromosome 3,
             complete sequence
          Length = 107004

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 420   agagtaagttcttcattcactgctaatgcaatatgttttgtgctcaggactgtctcctcc 479
             ||||| || |||||||||||||| || |||||||||||||| ||||  || |||||||||
Sbjct: 11849 agagtcagctcttcattcactgccaacgcaatatgttttgtactcaatacagtctcctcc 11908

                                        
Query: 480   agcctttcgagaccctcatcttgttct 506
             |   | || || |||||||||||||||
Sbjct: 11909 aatttctcaaggccctcatcttgttct 11935
to top
>emb|BX813633.1|CNS0AEK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB29ZF07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1265

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 492 ccctcatcttgttctctcataacttgcc 519
           ||||||||||||| ||||||||||||||
Sbjct: 560 ccctcatcttgttttctcataacttgcc 533
to top
>ref|NM_101490.2| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240
           (SYP51) transcript variant AT1G16240.1 mRNA, complete
           cds
          Length = 1077

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 641 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 582

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 581 actctgctcat 571
to top
>ref|NM_001035977.1| Arabidopsis thaliana SYP51 (SYNTAXIN OF PLANTS 51) AT1G16240
           (SYP51) transcript variant AT1G16240.2 mRNA, complete
           cds
          Length = 1065

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 618 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 559

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 558 actctgctcat 548
to top
>gb|AY097382.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds
          Length = 699

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 428 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 369

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 368 actctgctcat 358
to top
>gb|AY074863.1| Arabidopsis thaliana At1g16240/F3O9_4 mRNA, complete cds
          Length = 975

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 594 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 535

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 534 actctgctcat 524
to top
>gb|AF355755.1|AF355755 Arabidopsis thaliana syntaxin of plants 51 (SYP51) mRNA, complete
           cds
          Length = 941

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 554 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 495

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 494 actctgctcat 484
to top
>emb|BX818553.1|CNS0AEBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL85ZB12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 964

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 532 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 473

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 472 actctgctcat 462
to top
>emb|BX816781.1|CNS0ADA0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZH11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1031

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 600 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 541

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 540 actctgctcat 530
to top
>emb|BX818248.1|CNS0ACLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZF10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 954

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 560 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 501

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 500 actctgctcat 490
to top
>gb|AY085320.1| Arabidopsis thaliana clone 145295 mRNA, complete sequence
          Length = 948

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 498 tcttgttctctcataacttgcctctgaaggccaacaatcccttggttgtctaacccagca 557
           |||||||||||||||||||| |  |||   |||||||| |||||||| || |  |||| |
Sbjct: 568 tcttgttctctcataacttgtcgttgatatccaacaattccttggttatccatgccagta 509

                      
Query: 558 actctgctcat 568
           |||||||||||
Sbjct: 508 actctgctcat 498
to top
>gb|AC139849.5| Mus musculus BAC clone RP23-84M17 from chromosome 7, complete sequence
          Length = 189942

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 36     cacaaatgtccacacacagata 57
              ||||||||||||||||||||||
Sbjct: 177887 cacaaatgtccacacacagata 177908
to top
>gb|AC129199.3| Mus musculus BAC clone RP24-220I4 from 7, complete sequence
          Length = 159262

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 36   cacaaatgtccacacacagata 57
            ||||||||||||||||||||||
Sbjct: 9495 cacaaatgtccacacacagata 9516
to top
>gb|AC166158.3| Mus musculus BAC clone RP24-244P14 from chromosome 1, complete sequence
          Length = 170234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     cacaaatgtccacacacagatattt 60
              |||| ||||||||||||||||||||
Sbjct: 115687 cacatatgtccacacacagatattt 115663
to top
>gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complete sequence
          Length = 175026

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 36     cacaaatgtccacacacagatattt 60
              |||| ||||||||||||||||||||
Sbjct: 145361 cacatatgtccacacacagatattt 145385
to top
>gb|AC109233.10| Mus musculus chromosome 16, clone RP23-219N5, complete sequence
          Length = 271253

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    taccttgtacatgttgatacaacc 106
             |||||| |||||||||||||||||
Sbjct: 24248 taccttttacatgttgatacaacc 24271
to top
>emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on chromosome 13 Contains a
             novel gene and a CpG island, complete sequence
          Length = 153211

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tttaaagagactgcacactt 173
             ||||||||||||||||||||
Sbjct: 46515 tttaaagagactgcacactt 46534
to top
>emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 map 22q22.3, complete
            sequence
          Length = 192447

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   acaaatgtccacacacagat 56
            ||||||||||||||||||||
Sbjct: 3908 acaaatgtccacacacagat 3889
to top
>emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 map 22q22.3, complete
             sequence
          Length = 182974

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acaaatgtccacacacagat 56
             ||||||||||||||||||||
Sbjct: 57258 acaaatgtccacacacagat 57239
to top
>gb|AC099501.2| Homo sapiens chromosome 5 clone RP11-20O13, complete sequence
          Length = 43953

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 229   acaggtacttgatgagaagccaaacaataacc 260
             |||||||||||||||||||  |||||| ||||
Sbjct: 43550 acaggtacttgatgagaaggaaaacaaaaacc 43581
to top
>emb|BX640463.14| Zebrafish DNA sequence from clone DKEY-29P10 in linkage group 18,
              complete sequence
          Length = 233058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gtccacacacagatatttct 62
              ||||||||||||||||||||
Sbjct: 191453 gtccacacacagatatttct 191434
to top
>gb|AC114980.2| Homo sapiens chromosome 5 clone RP11-549J18, complete sequence
          Length = 181927

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 229    acaggtacttgatgagaagccaaacaataacc 260
              |||||||||||||||||||  |||||| ||||
Sbjct: 173053 acaggtacttgatgagaaggaaaacaaaaacc 173022
to top
>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3,
             complete sequence
          Length = 183435

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acaaatgtccacacacagat 56
             ||||||||||||||||||||
Sbjct: 79008 acaaatgtccacacacagat 78989
to top
>dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-100O24, chromosome 22,
             complete sequence
          Length = 175178

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acaaatgtccacacacagat 56
             ||||||||||||||||||||
Sbjct: 26627 acaaatgtccacacacagat 26608
to top
>dbj|AP006271.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-155P15, chromosome 22,
              complete sequence
          Length = 129950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acaaatgtccacacacagat 56
              ||||||||||||||||||||
Sbjct: 102619 acaaatgtccacacacagat 102600
to top
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0011E04
          Length = 136767

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aggtacttgatgagaagcca 250
             ||||||||||||||||||||
Sbjct: 52433 aggtacttgatgagaagcca 52452
to top
>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acaaatgtccacacacagat 56
              ||||||||||||||||||||
Sbjct: 305111 acaaatgtccacacacagat 305092
to top
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     cttcaacagggcgtcaaaca 190
               ||||||||||||||||||||
Sbjct: 1680255 cttcaacagggcgtcaaaca 1680236
to top
>emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-314N7, map 21q22.3
          Length = 121590

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acaaatgtccacacacagat 56
             ||||||||||||||||||||
Sbjct: 24294 acaaatgtccacacacagat 24275
to top
>gb|AC154196.1| Mus musculus BAC clone RP24-76I6 from 16, complete sequence
          Length = 207701

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    taccttgtacatgttgatacaacc 106
             |||||| |||||||||||||||||
Sbjct: 85847 taccttttacatgttgatacaacc 85870
to top
>emb|CT010571.7| Mouse DNA sequence from clone RP23-300L8 on chromosome 16, complete
             sequence
          Length = 218760

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 83    taccttgtacatgttgatacaacc 106
             |||||| |||||||||||||||||
Sbjct: 66444 taccttttacatgttgatacaacc 66421
to top
>dbj|AP001067.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1399C7, MX1-D21S171
             region, complete sequence
          Length = 148845

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acaaatgtccacacacagat 56
             ||||||||||||||||||||
Sbjct: 74934 acaaatgtccacacacagat 74915


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,004,500
Number of Sequences: 3902068
Number of extensions: 5004500
Number of successful extensions: 89020
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88765
Number of HSP's gapped (non-prelim): 242
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top