ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AASS_ARATH (Q9SMZ4) Alpha-aminoadipic semialdehyde synthase (LKR... 118 7e-27
2AASS_MOUSE (Q99K67) Alpha-aminoadipic semialdehyde synthase, mit... 49 7e-06
3AASS_HUMAN (Q9UDR5) Alpha-aminoadipic semialdehyde synthase, mit... 48 1e-05
4LYS9_YEAST (P38999) Saccharopine dehydrogenase [NADP+, L-glutama... 47 2e-05
5LYS9_MAGGR (Q9P4R4) Saccharopine dehydrogenase [NADP+, L-glutama... 44 2e-04
6CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC do... 34 0.22
7NKX23_MOUSE (P97334) Homeobox protein Nkx-2.3 (Homeobox protein ... 32 0.85
8GGPP6_ARATH (O22043) Geranylgeranyl pyrophosphate synthetase 6, ... 31 1.4
9PHNC1_HALMA (Q5V6B8) Phosphonates import ATP-binding protein phn... 30 4.2
10SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich... 30 4.2
11INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-) 25 4.9
12FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.8... 29 5.5
13RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote... 29 5.5
14ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor 29 5.5
15DEND_RAT (P50617) Dendrin 29 7.2
16TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subuni... 29 7.2
17ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... 29 7.2
18MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW an... 29 7.2
19SNUT3_XENLA (Q6GLZ8) U4/U6.U5 tri-snRNP-associated protein 3 29 7.2
20ESPL1_MOUSE (P60330) Separin (EC 3.4.22.49) (Separase) (Caspase-... 29 7.2
21SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-dete... 28 9.4
22RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-ass... 28 9.4
23MURC_SYNPX (Q7UA71) UDP-N-acetylmuramate--L-alanine ligase (EC 6... 28 9.4
24CNKR2_HUMAN (Q8WXI2) Connector enhancer of kinase suppressor of ... 28 9.4
25ACE_THETS (Q6Q4G4) Angiotensin-converting enzyme precursor (EC 3... 28 9.4
26AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7... 28 9.4
27CNKR2_RAT (Q9Z1T4) Connector enhancer of kinase suppressor of ra... 28 9.4
28CNKR2_MOUSE (Q80YA9) Connector enhancer of kinase suppressor of ... 28 9.4
29SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-dete... 28 9.4
30PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH) 28 9.4
31CWC21_ASPFU (Q4WDD0) Pre-mRNA-splicing factor cwc21 28 9.4
32UT1_MOUSE (Q8VHL0) Urea transporter, erythrocyte (Urea transport... 28 9.4
33NUMB1_CAEEL (Q9XTY6) Numb-related protein 1 (Protein kinase C ad... 28 9.4

>AASS_ARATH (Q9SMZ4) Alpha-aminoadipic semialdehyde synthase (LKR/SDH)|
            (cAt-LKR/SDH) [Includes: Lysine ketoglutarate reductase
            (EC 1.5.1.8) (LKR); Saccharopine dehydrogenase (EC
            1.5.1.9) (SDH) (cAt-SDH)]
          Length = 1064

 Score =  118 bits (296), Expect = 7e-27
 Identities = 57/101 (56%), Positives = 77/101 (76%)
 Frame = -3

Query: 469  AYXXXXXXMXXLXHXVEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGA 290
            AY      M  L H VEVE+   +  EKH ATLLEFG  +NG++TTAMA TVG+PAAIGA
Sbjct: 964  AYSGNEQDMVLLHHEVEVEFLESKRIEKHTATLLEFGDIKNGQTTTAMAKTVGIPAAIGA 1023

Query: 289  LLLLQNKVQRKGVIRPLQPEIYIPALEILDASGIKLIERVQ 167
            LLL+++K++ +GV+RPL+ E+Y+PAL+IL A GIKL+E+ +
Sbjct: 1024 LLLIEDKIKTRGVLRPLEAEVYLPALDILQAYGIKLMEKAE 1064



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>AASS_MOUSE (Q99K67) Alpha-aminoadipic semialdehyde synthase, mitochondrial|
            precursor (LKR/SDH) [Includes: Lysine ketoglutarate
            reductase (EC 1.5.1.8) (LOR) (LKR); Saccharopine
            dehydrogenase (EC 1.5.1.9) (SDH)]
          Length = 926

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 48/94 (51%)
 Frame = -3

Query: 469  AYXXXXXXMXXLXHXVEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGA 290
            +Y      M  +     + +P G   E     L+ +G   NG S  AMA TVG+P A+ A
Sbjct: 827  SYGPEEKDMIVMRDSFGIRHPSGH-LENKTIDLVVYGDF-NGFS--AMAKTVGLPTAMAA 882

Query: 289  LLLLQNKVQRKGVIRPLQPEIYIPALEILDASGI 188
             +LL  +++ KG++ P   EIY P LE + A GI
Sbjct: 883  KMLLDGEIEAKGLMGPFTKEIYGPILERIKAEGI 916



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>AASS_HUMAN (Q9UDR5) Alpha-aminoadipic semialdehyde synthase, mitochondrial|
            precursor (LKR/SDH) [Includes: Lysine ketoglutarate
            reductase (EC 1.5.1.8) (LOR) (LKR); Saccharopine
            dehydrogenase (EC 1.5.1.9) (SDH)]
          Length = 926

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 33/94 (35%), Positives = 47/94 (50%)
 Frame = -3

Query: 469  AYXXXXXXMXXLXHXVEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGA 290
            +Y      M  +     + +P G   E     L+ +G   NG S  AMA TVG+P A+ A
Sbjct: 827  SYGPEEKDMIVMRDSFGIRHPSGH-LEHKTIDLVAYGDI-NGFS--AMAKTVGLPTAMAA 882

Query: 289  LLLLQNKVQRKGVIRPLQPEIYIPALEILDASGI 188
             +LL  ++  KG++ P   EIY P LE + A GI
Sbjct: 883  KMLLDGEIGAKGLMGPFSKEIYGPILERIKAEGI 916



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>LYS9_YEAST (P38999) Saccharopine dehydrogenase [NADP+, L-glutamate-forming]|
           (EC 1.5.1.10) (Saccharopine reductase)
          Length = 446

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
 Frame = -3

Query: 466 YXXXXXXMXXLXHXVEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGAL 287
           Y      M  L H   +E+  G   E   +TL+++GK     S   MA TVG P AI   
Sbjct: 349 YEDNERDMVVLQHKFGIEWADGT-TETRTSTLVDYGKVGGYSS---MAATVGYPVAIATK 404

Query: 286 LLLQNKVQRKGVIRPLQPEIYIPAL-EILDASGIKLIER 173
            +L   ++  G++ P  PEI  P + E+ D  GI L E+
Sbjct: 405 FVLDGTIKGPGLLAPYSPEINDPIMKELKDKYGIYLKEK 443



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>LYS9_MAGGR (Q9P4R4) Saccharopine dehydrogenase [NADP+, L-glutamate-forming]|
           (EC 1.5.1.10) (Saccharopine reductase)
          Length = 450

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -3

Query: 436 LXHXVEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGALLLLQNKVQRK 257
           L H  E+E   G   E   ++L E+G        +AMA  VGVP A+    +L   +  +
Sbjct: 360 LQHKFEIENKDGS-RETRTSSLCEYGAPIGSGGYSAMAKFVGVPCAVAVKFVLDGTISDR 418

Query: 256 GVIRPLQPEIYIPAL-EILDASGIKLIERV 170
           GV+ P+  +I  P + E+ +  GI+  E+V
Sbjct: 419 GVLAPMNSKINDPLMKELKEKYGIECKEKV 448



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>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 28/104 (26%), Positives = 49/104 (47%)
 Frame = -2

Query: 359 KDRERQVNHRHGPHRRGTGSDRSPALAPEQGSEERRDPASATGDLHPCAGDLGCVGHQAD 180
           KD + ++ +RH   R   GS+R+ +   ++G   +R PAS   +L   AG    VG    
Sbjct: 76  KDPKLEIRYRHKKCRERDGSERAGSEPRDEGGGRKR-PAS-DPELQRRAGSGTGVGAMLA 133

Query: 179 RESADLRMSAWDEIMRVHRVYIYMLLQQRQRVNKMMILVCCKCK 48
           R SA    S+   ++     + +   QQ+Q+  K    +C +C+
Sbjct: 134 RGSASPHKSSPQPLVATPSQHHHQQQQQQQQQIKRSARMCGECE 177



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>NKX23_MOUSE (P97334) Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C)|
           (Nkx2-C) (Homeobox protein NK-2 homolog 3)
          Length = 362

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 290 GSYRCRYPDGEGHGGG*PAVLGLSELQQRC 379
           GSY C YP G G GGG  A    + +Q  C
Sbjct: 286 GSYGCAYPTGGGGGGGGTASAATTAMQPAC 315



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>GGPP6_ARATH (O22043) Geranylgeranyl pyrophosphate synthetase 6, mitochondrial|
           precursor (GGPP synthetase 6) (GGPS6) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 336

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 149 WDEIMRVHRVYIYMLLQQRQRVNKMMILVCCK 54
           W+ ++ VH+   Y LL   +RV  M+ LV C+
Sbjct: 61  WEPVLEVHKAMRYTLLPGGKRVRPMLCLVACE 92



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>PHNC1_HALMA (Q5V6B8) Phosphonates import ATP-binding protein phnC 1 (EC|
           3.6.3.28)
          Length = 273

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 26/64 (40%), Positives = 33/64 (51%)
 Frame = -3

Query: 379 ATLLEFGKTENGRSTTAMALTVGVPAAIGALLLLQNKVQRKGVIRPLQPEIYIPALEILD 200
           ATL   G+T   R T   AL+  +   +GAL  L      +G I PL P+   PALE LD
Sbjct: 86  ATLAYQGETLVDRRT---ALSNVLTGRLGALSWL------RGFIEPLLPQHPEPALERLD 136

Query: 199 ASGI 188
           A G+
Sbjct: 137 AVGL 140



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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 414 STPXGDPPRSTKQRCWSSERPRTAGQPPP 328
           ST  G PP ST     S+  P+T G PPP
Sbjct: 153 STAPGPPPPSTPSSGVSTTPPQTGGPPPP 181



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>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 24.6 bits (52), Expect(2) = 4.9
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -2

Query: 305 GSDRSPALAPEQGSEERRDPASATGDLHPCAGDLGCVGHQ 186
           G   +PAL P  G      P S+   LH      G   HQ
Sbjct: 133 GGPVAPALPPPVGINSSSSPGSSAAGLHQRHHQPGAPAHQ 172



 Score = 23.1 bits (48), Expect(2) = 4.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 369 WSSERPRTAGQPPPWPSPSGY 307
           +S   P+   +PPP+ SP+G+
Sbjct: 76  FSLRSPKPEYRPPPFSSPNGH 96



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>FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:|
            3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC
            4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH]
            (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase
            (EC 2.
          Length = 2086

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = -3

Query: 424  VEVEYPXGRPXEKHQATLLEFGKTENGRSTTAMALTVGVPAAIGALLLLQNKVQRKGVIR 245
            VE+E+P     ++ + T++   +  NG+ T  + L  G    I   L+    V R  V  
Sbjct: 1204 VEIEHP-----DEPENTVISAFEPINGKVTKVLELRKGAGDVISLQLIEARGVDRVPVAL 1258

Query: 244  PL----QPEI-YIPALEILDASGIKLIE 176
            PL    QP+I Y P +E++     ++ E
Sbjct: 1259 PLEFKYQPQIGYAPIVEVMTDRNTRIKE 1286



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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 414 STPXGDPPRSTKQRCWSSERPRTAGQPPPWPSP 316
           +T    PP S + R  +++ P   G PPP P+P
Sbjct: 438 ATARVSPPESPRARAAAAQPPTEHGPPPPRPAP 470



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>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor|
          Length = 1470

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
 Frame = -2

Query: 350  ERQVNHRHGPHRRGTGSDRS------PALAPEQGSEERRDPASATGDLHPCAGDLGCVGH 189
            ERQ   R  PH++G GS+ S      P+  P  G       +S+ G   P   D+    H
Sbjct: 1389 ERQEETRKAPHKQGVGSEESLVPYSKPSF-PSPGGHSSSGTSSSKGSTGPRKADVLRGSH 1447

Query: 188  QADRESADL 162
            Q  R + DL
Sbjct: 1448 Q--RNANDL 1454



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>DEND_RAT (P50617) Dendrin|
          Length = 653

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
 Frame = +1

Query: 193 PTHPRSPAQGCRSPVAEAGSRLSSEPCSGARAGLLSLPVPRR-*GPWRWLTCRSRSFRTP 369
           PTHP SP      P A          C+G+  G  +  VPRR  G W          RTP
Sbjct: 507 PTHPGSPEHSTLGPAAPG--------CAGSVKGPEAAGVPRRAGGGWA---------RTP 549

Query: 370 AALLGASRXVARR 408
               GA R    R
Sbjct: 550 GPYAGALREAVSR 562



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>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (38 kDa mitochondrial outer membrane protein)
           (OM38)
          Length = 361

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = -1

Query: 414 STPXGDPPRSTKQRCWSSERPRTAGQPPPWPSPSGY 307
           S P G PP  T         P   G PPP PSP G+
Sbjct: 9   SPPAGPPPPPT---------PSLVGLPPPPPSPPGF 35



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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 193 PTHPRSPAQGCRSPVAEAGSRLSSEPCSGARAG 291
           P HP +PA   R+    A     S PC G  +G
Sbjct: 88  PAHPEAPAAAARAAALVAHPGAGSYPCGGGSSG 120



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>MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 1 (BAI1-associated protein 1)
            (BAP-1) (Membrane-associated guanylate kinase inverted 1)
            (MAGI-1)
          Length = 1471

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
 Frame = -2

Query: 404  RATXREAPSNAAGVRKDRERQVNHRHGPHRR--------GTGSDRSPALAPEQGSEERRD 249
            R+  R   S+ +  R+  ER ++ R  P RR           +DR  A +PE+  E   D
Sbjct: 1366 RSPTRRKDSSPSRRRRSLERLLDQRRSPERRRGGSPERRAKSTDRRRARSPERRRERSLD 1425

Query: 248  PASATGDLHPCAGDLGCVGHQADRESADLRMSA 150
              +              VGH+ +RE A L++ A
Sbjct: 1426 KRNRDDK----------VGHR-EREEAGLKLEA 1447



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>SNUT3_XENLA (Q6GLZ8) U4/U6.U5 tri-snRNP-associated protein 3|
          Length = 158

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -2

Query: 404 RATXREAPSNAAGVRKDRERQVNHRHGPHRRGTGSDR-------SPALAPEQGSEERRDP 246
           R+  RE         + RER+ +    PHRR + S R       SP+   ++  +++++P
Sbjct: 19  RSASRERERRRRERSRSRERRRSRSRSPHRRRSRSPRRHRSSSISPSRLKDRRDDDKKEP 78

Query: 245 ASATG 231
             + G
Sbjct: 79  KESKG 83



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>ESPL1_MOUSE (P60330) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein|
            ESPL1) (Extra spindle poles-like 1 protein)
          Length = 2118

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
 Frame = -1

Query: 423  WRW------STPXGDPPRSTKQRCWSSERPRTAGQPPPW--PSPSGYRQR*EPCS 283
            W W      S P  +P +  +Q+C    R R A  PPP    S  G  +   PC+
Sbjct: 1287 WGWHPPLVKSLPVLEPAKIRRQKCSGRGRRRIASVPPPLHNSSQKGLEEEGPPCT 1341



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>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 311

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 353 RERQVNHRHGPHRRGTGSDRSPALAPEQGS 264
           RE+  N+++ PHRR   S RS  L P   S
Sbjct: 66  REKYPNYKYQPHRRAKVSQRSGILQPRVAS 95



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>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1846

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 392  REAPSNAAGVRKDRERQVNHRHGPHRRGTGSDRS--PALAPEQGSEE 258
            +E PS A    + R +  + R GP RRG    RS    LAP +  +E
Sbjct: 1563 KEPPSRATETGESRGQDNSGRRGPQRRGARVPRSGTTELAPPRSPQE 1609



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>MURC_SYNPX (Q7UA71) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 467

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 326 GPHRRGTGSDRSPALAPEQGSEERRDPASATGDLHPCAGDLGCVGH 189
           G H + T S  +  L  E G     DP +  G + PC G  G  GH
Sbjct: 121 GSHGKTTTSTLTTTLLMEAGE----DPTAIIGGIVPCLGSNGHAGH 162



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>CNKR2_HUMAN (Q8WXI2) Connector enhancer of kinase suppressor of ras 2|
           (Connector enhancer of KSR2) (CNK2)
          Length = 1034

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 196 THPRSPAQGCRSPVAEA-GSRLSSEPCSGARA 288
           T+PR P+  C SP  EA  SRLSS   S +++
Sbjct: 709 TYPRPPSMSCASPYVEAKHSRLSSTETSQSQS 740



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>ACE_THETS (Q6Q4G4) Angiotensin-converting enzyme precursor (EC 3.4.15.1)|
           (Dipeptidyl carboxypeptidase I) (Kininase II) (TtACE)
          Length = 616

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -1

Query: 426 KWRWSTPXGDPPRSTKQRCWSSERPRTAGQPPP 328
           +WRW    GD PR      W   R +  G  PP
Sbjct: 459 QWRWDVFSGDTPRPKYNSKWWHNRCKYQGVYPP 491



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>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 799

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = -1

Query: 396 PPRSTKQRCWSSERPRTAGQPPPWPSPSGYRQR*EPCSCSRTRFR 262
           PP S     WS  RP   G  P  P+P+       P      RFR
Sbjct: 388 PPESALAASWSRPRPGVNGADPAVPAPAPAPPEASPAGWRPWRFR 432



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>CNKR2_RAT (Q9Z1T4) Connector enhancer of kinase suppressor of ras 2|
           (Connector enhancer of KSR2) (CNK2) (Membrane-associated
           guanylate kinase-interacting protein) (MAGUIN)
          Length = 1032

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 196 THPRSPAQGCRSPVAEA-GSRLSSEPCSGARA 288
           T+PR P+  C SP  EA  SRLSS   S +++
Sbjct: 709 TYPRPPSMSCASPYVEAKHSRLSSTETSQSQS 740



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>CNKR2_MOUSE (Q80YA9) Connector enhancer of kinase suppressor of ras 2|
           (Connector enhancer of KSR2) (CNK2)
          Length = 1032

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 196 THPRSPAQGCRSPVAEA-GSRLSSEPCSGARA 288
           T+PR P+  C SP  EA  SRLSS   S +++
Sbjct: 709 TYPRPPSMSCASPYVEAKHSRLSSTETSQSQS 740



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>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 355

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 353 RERQVNHRHGPHRRGTGSDRSPALAPEQGS 264
           RE+  N+++ PHRR   S RS  L P   S
Sbjct: 66  REKYPNYKYQPHRRAKVSQRSGILQPRVAS 95



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>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
 Frame = -2

Query: 404 RATXREAPSNAAGVRKDRERQVNHRHGPHRRGTGSDRSPALAPEQGSE---ERRDPASAT 234
           R     AP  AAG        V  R  P R  TG+ R PA  P +  E       PA AT
Sbjct: 162 RGVSEGAPHLAAGDGARFMNSVALRTAPPRPSTGTGRPPAKTPARAEEPPAPAASPAPAT 221

Query: 233 GDL 225
             L
Sbjct: 222 APL 224



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>CWC21_ASPFU (Q4WDD0) Pre-mRNA-splicing factor cwc21|
          Length = 217

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 414 STPXGDPPRSTKQRCWSSERPRTAGQPPPWPSPSG 310
           STP G       QR ++  +PR AG   P+P  SG
Sbjct: 8   STPRGSGTSGYVQRNYAFMKPRNAGYGAPYPPVSG 42



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>UT1_MOUSE (Q8VHL0) Urea transporter, erythrocyte (Urea transporter B) (UT-B)|
          Length = 384

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 228 ISGCRGRITPFL*TLFWSKSRAPIAAGTPTVRAMAVVDLPFSVFPNSSSVAW 383
           + GC G +   L  L  S+ R+ IAAG     A  +V +  +VF N     W
Sbjct: 89  LCGCVGTVVSTLTALLLSQDRSAIAAGLQGYNA-TLVGILMAVFSNKGDYFW 139



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>NUMB1_CAEEL (Q9XTY6) Numb-related protein 1 (Protein kinase C adapter 1) (CKA1)|
          Length = 593

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = -1

Query: 414 STPXGDPPRSTKQRCWSSERPRTAGQPPPWP--------SPSGYRQR*EPCSCSR 274
           ++P  DPP ++         P  A  PPP P        SPS Y+Q+ +  + +R
Sbjct: 498 TSPSSDPPSTSSYSVLPKSGPPPAHAPPPLPVRQAVSNGSPSIYQQQLQQANSTR 552


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,675,551
Number of Sequences: 219361
Number of extensions: 1337804
Number of successful extensions: 5113
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5079
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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