ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23b06 |
|---|---|
| Clone Library Name | barley_pub |
>SET_RAT (Q63945) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002) Length = 289 Score = 57.0 bits (136), Expect = 4e-08 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 7/74 (9%) Frame = -1 Query: 548 ATSIKXKEGMEIN-------GNAIKKKXSKRPLVEESFFTWFTDTEHKSLADGVQDEVAE 390 +T IK K G ++ A +K+ + P ESFFTWFTD +D DE+ E Sbjct: 167 STEIKWKSGKDLTKRSSQTQNKASRKRQHEEP---ESFFTWFTDH-----SDAGADELGE 218 Query: 389 IIKEDLWPNPLKYF 348 +IK+D+WPNPL+Y+ Sbjct: 219 VIKDDIWPNPLQYY 232
>SET_MOUSE (Q9EQU5) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) Length = 289 Score = 57.0 bits (136), Expect = 4e-08 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 7/74 (9%) Frame = -1 Query: 548 ATSIKXKEGMEIN-------GNAIKKKXSKRPLVEESFFTWFTDTEHKSLADGVQDEVAE 390 +T IK K G ++ A +K+ + P ESFFTWFTD +D DE+ E Sbjct: 167 STEIKWKSGKDLTKRSSQTQNKASRKRQHEEP---ESFFTWFTDH-----SDAGADELGE 218 Query: 389 IIKEDLWPNPLKYF 348 +IK+D+WPNPL+Y+ Sbjct: 219 VIKDDIWPNPLQYY 232
>SET_HUMAN (Q01105) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) Length = 290 Score = 57.0 bits (136), Expect = 4e-08 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 7/74 (9%) Frame = -1 Query: 548 ATSIKXKEGMEIN-------GNAIKKKXSKRPLVEESFFTWFTDTEHKSLADGVQDEVAE 390 +T IK K G ++ A +K+ + P ESFFTWFTD +D DE+ E Sbjct: 168 STEIKWKSGKDLTKRSSQTQNKASRKRQHEEP---ESFFTWFTDH-----SDAGADELGE 219 Query: 389 IIKEDLWPNPLKYF 348 +IK+D+WPNPL+Y+ Sbjct: 220 VIKDDIWPNPLQYY 233
>SET_DROME (P53997) Protein SET| Length = 269 Score = 56.2 bits (134), Expect = 7e-08 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Frame = -1 Query: 548 ATSIKXKEGMEINGNAIKK---KXSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKE 378 +T IK KEG + + K KR ++FF WF+D D V DE+AE+IK+ Sbjct: 162 STPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKTFFDWFSDN-----TDPVNDEIAELIKD 216 Query: 377 DLWPNPLKYF 348 DLWPNPL+Y+ Sbjct: 217 DLWPNPLQYY 226
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 50.4 bits (119), Expect = 4e-06 Identities = 24/38 (63%), Positives = 30/38 (78%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 SFFTWF+D SL + D++AEIIKEDLWPNPL+Y+ Sbjct: 377 SFFTWFSD---HSLPES--DKIAEIIKEDLWPNPLQYY 409
>TSYL1_MOUSE (O88852) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 379 Score = 50.1 bits (118), Expect = 5e-06 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 SFFTWF+D SL + D +AEIIKEDLWPNPL+Y+ Sbjct: 318 SFFTWFSD---HSLPES--DRIAEIIKEDLWPNPLQYY 350
>TSYL3_HUMAN (Q9H489) Testis-specific Y-encoded-like protein 3 (TSPY-like 3)| Length = 355 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 SFF+WF+ SL + D VA+IIK+DLWPNPL+Y+ Sbjct: 293 SFFSWFSQ---HSLPEA--DRVAQIIKDDLWPNPLQYY 325
>TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 414 Score = 43.1 bits (100), Expect = 6e-04 Identities = 21/38 (55%), Positives = 26/38 (68%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 SFF WF+D H L D +AEIIK +LWPNPL+Y+ Sbjct: 353 SFFNWFSD--HSLLEF---DRIAEIIKGELWPNPLQYY 385
>TSYL4_MOUSE (Q8VD63) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 406 Score = 40.0 bits (92), Expect = 0.005 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 SFF WF+D H L D +AEIIK +LW NPL+Y+ Sbjct: 345 SFFNWFSD--HSLLEF---DRIAEIIKGELWSNPLQYY 377
>SPR2_CAEEL (Q18240) Suppressor of presenilin 2| Length = 312 Score = 37.4 bits (85), Expect = 0.035 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Frame = -1 Query: 494 KKXSKRPLVEE-----SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 K+ K P E+ +F W T + +L D DE+AE+IK+DL+ NPL+Y+ Sbjct: 159 KENKKPPFPEDGDSAHTFLEWLT---YAALPDS--DEIAEVIKDDLYVNPLQYY 207
>ASP_PLAFS (P13825) Aspartic acid-rich protein precursor| Length = 253 Score = 37.0 bits (84), Expect = 0.045 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -1 Query: 554 INATSIKXKEGME-INGNAIKKKXSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKE 378 + T IK KEG I + + + S F WFT E + D V E+I+ Sbjct: 136 VECTRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFEWFTTDELQDKPD-----VGELIRR 190 Query: 377 DLWPNPLKYF 348 ++W NPL Y+ Sbjct: 191 EIWHNPLSYY 200
>TSPY1_HUMAN (Q01534) Testis-specific Y-encoded protein 1| Length = 308 Score = 36.2 bits (82), Expect = 0.077 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 +FF WF+D +++AEI+ +DLW NPL+Y+ Sbjct: 256 NFFNWFSDHNFAG-----SNKIAEILCKDLWRNPLQYY 288
>TSPY1_RAT (Q9R1M3) Testis-specific Y-encoded protein 1 (rTSPY)| Length = 334 Score = 34.7 bits (78), Expect = 0.23 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -1 Query: 461 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 348 +FF W HK + +AEII +DLWPNPL Y+ Sbjct: 296 TFFNWLC--AHKFPGS---NRIAEIIMDDLWPNPLYYY 328
>TSPY1_BOVIN (O19110) Testis-specific Y-encoded protein 1 (bTSPY)| Length = 317 Score = 31.6 bits (70), Expect = 1.9 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 404 DEVAEIIKEDLWPNPLKYF 348 + +AEII ED+W +PLKY+ Sbjct: 288 NRIAEIISEDVWDDPLKYY 306
>METK_PROMP (Q7V2Y8) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 413 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -1 Query: 470 VEESFFTWFTDTEHKSLADGV--QDEVAEIIKEDLWPN 363 V S T T+H + DG+ ++E+ + IKEDLW N Sbjct: 184 VPVSINTILISTQHTAEIDGITNEEEIRQKIKEDLWIN 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,460,773 Number of Sequences: 219361 Number of extensions: 993366 Number of successful extensions: 2271 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2266 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
