Clone Name | rbasd23b06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1109 Score = 242 bits (122), Expect = 1e-60 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Minus Query: 328 aactcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatg 387 ||||||||| ||||||| |||||||| |||||||| || ||||||| ||||| |||||| Sbjct: 824 aactcttcagcctcattattgaaatacttcaatggattgggccacaggtcttccttgatg 765 Query: 388 atctctgccacctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaac 447 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 764 atctcagccacctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaac 705 Query: 448 caggtgaagaaactttcttcaaccaatgggcgcttgcttnctttcttcttaatcgcattc 507 ||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||| Sbjct: 704 caggtgaagaaactttcctcaaccaatggtcgcttgctccctttcttct---tggcattc 648 Query: 508 ccatt---aatttccattccttctttncacttaatggaagtggcatttattg 556 ||||| |||||||||||||||||| ||||||||| ||| |||||||||| Sbjct: 647 ccatttgcaatttccattccttctttccacttaatgctagtagcatttattg 596 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Minus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 1096 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 1037 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 1036 taaacagttcctaagg----gttccagctaagtca 1006
>ref|XM_506840.1| PREDICTED Oryza sativa (japonica cultivar-group), B1342F01.11 mRNA Length = 1315 Score = 242 bits (122), Expect = 1e-60 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Minus Query: 328 aactcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatg 387 ||||||||| ||||||| |||||||| |||||||| || ||||||| ||||| |||||| Sbjct: 835 aactcttcagcctcattattgaaatacttcaatggattgggccacaggtcttccttgatg 776 Query: 388 atctctgccacctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaac 447 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 775 atctcagccacctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaac 716 Query: 448 caggtgaagaaactttcttcaaccaatgggcgcttgcttnctttcttcttaatcgcattc 507 ||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||| Sbjct: 715 caggtgaagaaactttcctcaaccaatggtcgcttgctccctttcttct---tggcattc 659 Query: 508 ccatt---aatttccattccttctttncacttaatggaagtggcatttattg 556 ||||| |||||||||||||||||| ||||||||| ||| |||||||||| Sbjct: 658 ccatttgcaatttccattccttctttccacttaatgctagtagcatttattg 607 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Minus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 1107 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 1048 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 1047 taaacagttcctaagg----gttccagctaagtca 1017
>dbj|AK059578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A12, full insert sequence Length = 1109 Score = 242 bits (122), Expect = 1e-60 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Minus Query: 328 aactcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatg 387 ||||||||| ||||||| |||||||| |||||||| || ||||||| ||||| |||||| Sbjct: 824 aactcttcagcctcattattgaaatacttcaatggattgggccacaggtcttccttgatg 765 Query: 388 atctctgccacctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaac 447 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 764 atctcagccacctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaac 705 Query: 448 caggtgaagaaactttcttcaaccaatgggcgcttgcttnctttcttcttaatcgcattc 507 ||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||| Sbjct: 704 caggtgaagaaactttcctcaaccaatggtcgcttgctccctttcttct---tggcattc 648 Query: 508 ccatt---aatttccattccttctttncacttaatggaagtggcatttattg 556 ||||| |||||||||||||||||| ||||||||| ||| |||||||||| Sbjct: 647 ccatttgcaatttccattccttctttccacttaatgctagtagcatttattg 596 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Minus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 1096 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 1037 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 1036 taaacagttcctaagg----gttccagctaagtca 1006
>dbj|AK102294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L07, full insert sequence Length = 1314 Score = 238 bits (120), Expect = 2e-59 Identities = 203/230 (88%), Gaps = 6/230 (2%) Strand = Plus / Minus Query: 328 aactcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatg 387 ||||||||| ||||||| |||||||| |||||||| || ||||||| ||||| |||||| Sbjct: 834 aactcttcagcctcattattgaaatacttcaatggattgggccacaggtcttccttgatg 775 Query: 388 atctctgccacctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaac 447 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 774 atctcagccacctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaac 715 Query: 448 caggtgaagaaactttcttcaaccaatgggcgcttgcttnctttcttcttaatcgcattc 507 ||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||| Sbjct: 714 caggtgaagaaactttcctcaaccaatggtcgcttgctccctttcttct---tggcattc 658 Query: 508 ccatt---aatttccattccttctttncacttaatggaagtggcatttat 554 ||||| |||||||||||||||||| ||||||||| ||| |||||||| Sbjct: 657 ccatttgcaatttccattccttctttccacttaatgctagtagcatttat 608 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Minus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 1106 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 1047 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 1046 taaacagttcctaagg----gttccagctaagtca 1016
>gb|AF384036.1| Zea mays nucleosome/chromatin assembly factor A (nfa104) mRNA, complete cds Length = 907 Score = 149 bits (75), Expect = 1e-32 Identities = 146/170 (85%) Strand = Plus / Minus Query: 331 tcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatc 390 |||||||||||||||||||| || ||||| || || |||||||| ||||| ||||||||| Sbjct: 781 tcttcaacctcattgttgaagtacttcaaaggattaggccacaagtcttccttgatgatc 722 Query: 391 tctgccacctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaaccag 450 || ||||||||||||||||| |||||||||||||||||| |||||||||| | |||||| Sbjct: 721 tccgccacctcatcttgcacaccatcagcaagactcttgagctctgtatcactaaaccag 662 Query: 451 gtgaagaaactttcttcaaccaatgggcgcttgcttnctttcttcttaat 500 | ||| |||||||| | || ||||| |||||| || | ||||| ||||| Sbjct: 661 gagaaaaaactttccactactaatggccgcttgtttcccttcttgttaat 612
>gb|AF384035.1| Zea mays nucleosome/chromatin assembly factor A (nfa103) mRNA, complete cds Length = 958 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 334 tcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatctct 393 ||||||||||||||||| || ||||| || || |||||||||||||| || |||||||| Sbjct: 812 tcaacctcattgttgaagtacttcaaaggattaggccacaaatcttcctttatgatctcc 753 Query: 394 gccacctcatcttgcaccccatcagcaagactcttgtgctctgtatc 440 ||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 752 gccacctcatcttgcacaccatcagcaagactcttgagctctgtatc 706
>gb|AY103799.1| Zea mays PCO060604 mRNA sequence Length = 1140 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 334 tcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatctct 393 ||||||||||||||||| || ||||| || || |||||||||||||| || |||||||| Sbjct: 818 tcaacctcattgttgaagtacttcaaaggattaggccacaaatcttcctttatgatctcc 759 Query: 394 gccacctcatcttgcaccccatcagcaagactcttgtgctctgtatc 440 ||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 758 gccacctcatcttgcacaccatcagcaagactcttgagctctgtatc 712 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 agttccagctaagtcaaaca 144 |||||||||||||||||||| Sbjct: 1002 agttccagctaagtcaaaca 983
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 397 acctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaaccaggtgaag 456 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 22171994 acctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaaccaggtgaag 22172053 Query: 457 aaact 461 ||||| Sbjct: 22172054 aaact 22172058 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Plus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 22171199 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 22171258 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 22171259 taaacagttcctaagg----gttccagctaagtca 22171289 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 341 cattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatctctgccacct 400 |||| |||||||| |||||||| || ||||||| ||||| ||||||||||| ||||||| Sbjct: 22171840 cattattgaaatacttcaatggattgggccacaggtcttccttgatgatctcagccacct 22171899 Score = 48.1 bits (24), Expect = 0.034 Identities = 35/39 (89%) Strand = Plus / Plus Query: 518 ccattccttctttncacttaatggaagtggcatttattg 556 ||||||||||||| ||||||||| ||| |||||||||| Sbjct: 22173383 ccattccttctttccacttaatgctagtagcatttattg 22173421 Score = 46.1 bits (23), Expect = 0.13 Identities = 34/38 (89%) Strand = Plus / Plus Query: 460 ctttcttcaaccaatgggcgcttgcttnctttcttctt 497 ||||| ||||||||||| |||||||| |||||||||| Sbjct: 22173246 ctttcctcaaccaatggtcgcttgctccctttcttctt 22173283
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 397 acctcatcttgcaccccatcagcaagactcttgtgctctgtatcggtgaaccaggtgaag 456 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 67838 acctcatcttgcacaccatcagcaagactcttgtgctctgtatcagtaaaccaggtgaag 67897 Query: 457 aaact 461 ||||| Sbjct: 67898 aaact 67902 Score = 60.0 bits (30), Expect = 9e-06 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand = Plus / Plus Query: 47 cagattatgatatatagaggtctcctttaagtcgaaaatacgacag-tacgataacgcat 105 |||||||||||||| || ||||||||| ||||||||||||||| | | |||| |||| Sbjct: 67043 cagattatgatatagaggtgtctcctttgagtcgaaaatacgacggactccataaggcat 67102 Query: 106 taaacagctcctaaggctaagttccagctaagtca 140 ||||||| |||||||| ||||||||||||||| Sbjct: 67103 taaacagttcctaagg----gttccagctaagtca 67133 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 341 cattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatctctgccacct 400 |||| |||||||| |||||||| || ||||||| ||||| ||||||||||| ||||||| Sbjct: 67684 cattattgaaatacttcaatggattgggccacaggtcttccttgatgatctcagccacct 67743 Score = 48.1 bits (24), Expect = 0.034 Identities = 35/39 (89%) Strand = Plus / Plus Query: 518 ccattccttctttncacttaatggaagtggcatttattg 556 ||||||||||||| ||||||||| ||| |||||||||| Sbjct: 69227 ccattccttctttccacttaatgctagtagcatttattg 69265 Score = 46.1 bits (23), Expect = 0.13 Identities = 34/38 (89%) Strand = Plus / Plus Query: 460 ctttcttcaaccaatgggcgcttgcttnctttcttctt 497 ||||| ||||||||||| |||||||| |||||||||| Sbjct: 69090 ctttcctcaaccaatggtcgcttgctccctttcttctt 69127
>emb|CR926310.2| Xenopus tropicalis finished cDNA, clone TEgg072e13 Length = 2933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 350 aatatttcaatgggttcggccacaaatcttctttgatgatc 390 |||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1802 aatattccaatgggtttggccacaaatcttctttgatgatc 1762
>ref|NM_001016811.1| Xenopus tropicalis hypothetical protein LOC549565 (LOC549565), mRNA Length = 2797 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 350 aatatttcaatgggttcggccacaaatcttctttgatgatc 390 |||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1220 aatattccaatgggtttggccacaaatcttctttgatgatc 1180
>emb|CR855567.1| Xenopus tropicalis finished cDNA, clone TEgg035b09 Length = 2797 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 350 aatatttcaatgggttcggccacaaatcttctttgatgatc 390 |||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1220 aatattccaatgggtttggccacaaatcttctttgatgatc 1180
>ref|XM_472746.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 331 tcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatc 390 ||||||| ||||||||||| || ||||| || || ||||||| |||||| ||||||| Sbjct: 674 tcttcaaattcattgttgaagtacttcaaaggattaggccacagatcttccttgatgaca 615 Query: 391 tctgccacctcatc 404 |||||||||||||| Sbjct: 614 tctgccacctcatc 601
>dbj|AK109192.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B05, full insert sequence Length = 823 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 340 tcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatctctgccacc 399 ||||||||||| || ||||| || || ||||||| |||||| ||||||| ||||||||| Sbjct: 820 tcattgttgaagtacttcaaaggattaggccacagatcttccttgatgacatctgccacc 761 Query: 400 tcatc 404 ||||| Sbjct: 760 tcatc 756
>dbj|AK102874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112C19, full insert sequence Length = 1245 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 331 tcttcaacctcattgttgaaatatttcaatgggttcggccacaaatcttctttgatgatc 390 ||||||| ||||||||||| || ||||| | || ||||||| |||||| ||||||| Sbjct: 829 tcttcaaattcattgttgaagtacttcaaaagattaggccacagatcttccttgatgaca 770 Query: 391 tctgccacctcatc 404 |||||||||||||| Sbjct: 769 tctgccacctcatc 756
>ref|NM_101738.2| Arabidopsis thaliana DNA binding AT1G18800 mRNA, complete cds Length = 1257 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 361 gggttcggccacaaatcttctttgatgatctctgccacct 400 ||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 777 gggttgggccacaaatcttccttgatgatatctgcaacct 738
>gb|AC011809.2| Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete sequence Length = 108767 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 361 gggttcggccacaaatcttctttgatgatctctgccacct 400 ||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 47960 gggttgggccacaaatcttccttgatgatatctgcaacct 47921
>gb|BT005248.1| Arabidopsis thaliana At1g18800 mRNA, complete cds Length = 687 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 361 gggttcggccacaaatcttctttgatgatctctgccacct 400 ||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 644 gggttgggccacaaatcttccttgatgatatctgcaacct 605
>gb|AY086761.1| Arabidopsis thaliana clone 27467 mRNA, complete sequence Length = 1104 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 361 gggttcggccacaaatcttctttgatgatctctgccacct 400 ||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 777 gggttgggccacaaatcttccttgatgatatctgcaacct 738
>dbj|AK118024.1| Arabidopsis thaliana At1g18800 mRNA for unknown protein, complete cds, clone: RAFL19-23-O10 Length = 1248 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 361 gggttcggccacaaatcttctttgatgatctctgccacct 400 ||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 767 gggttgggccacaaatcttccttgatgatatctgcaacct 728
>emb|CR722839.2|CNS0GKOT Tetraodon nigroviridis full-length cDNA Length = 1039 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 tcggtgaaccaggtgaagaaactttct 465 |||||||||||||||||||| |||||| Sbjct: 710 tcggtgaaccaggtgaagaagctttct 684
>emb|CR702275.2|CNS0G4TR Tetraodon nigroviridis full-length cDNA Length = 1261 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 tcggtgaaccaggtgaagaaactttct 465 |||||||||||||||||||| |||||| Sbjct: 800 tcggtgaaccaggtgaagaagctttct 774
>emb|CR693061.2|CNS0FXPT Tetraodon nigroviridis full-length cDNA Length = 1221 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 tcggtgaaccaggtgaagaaactttct 465 |||||||||||||||||||| |||||| Sbjct: 761 tcggtgaaccaggtgaagaagctttct 735
>emb|CR689448.2|CNS0FUXG Tetraodon nigroviridis full-length cDNA Length = 1150 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 tcggtgaaccaggtgaagaaactttct 465 |||||||||||||||||||| |||||| Sbjct: 685 tcggtgaaccaggtgaagaagctttct 659
>ref|XM_313356.2| Anopheles gambiae str. PEST ENSANGP00000011355 (ENSANGG00000008866), partial mRNA Length = 609 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 352 tatttcaatgggttcggccacaaatcttctttgat 386 |||| ||||||||||||||||||||| || ||||| Sbjct: 581 tattgcaatgggttcggccacaaatcgtccttgat 547
>gb|AF007219.1|AF007219 Tetraodon fluviatilis PP2A inhibitor (set) gene, complete cds Length = 4603 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 439 tcggtgaaccaggtgaagaaactttct 465 |||||||||||||||||||| |||||| Sbjct: 3522 tcggtgaaccaggtgaagaagctttct 3496
>gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence Length = 134798 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 taagtcaaacacaaaacaaaac 155 |||||||||||||||||||||| Sbjct: 8916 taagtcaaacacaaaacaaaac 8937
>gb|AY398416.1| Danio rerio clone RK071A2C04 myeloid leukemia-associated SET translocation protein (SET) mRNA, complete cds Length = 1869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 atcggtgaaccaggtgaagaa 458 ||||||||||||||||||||| Sbjct: 802 atcggtgaaccaggtgaagaa 782
>ref|XM_428297.1| PREDICTED: Gallus gallus similar to Gpr43 protein (LOC430746), partial mRNA Length = 1398 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 gcctctgcagacaacgcttcatcag 223 |||||||||||||||||| |||||| Sbjct: 1112 gcctctgcagacaacgctgcatcag 1136
>ref|XM_451443.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A10131g predicted mRNA Length = 2163 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 cctcattgttgaaatatttca 358 ||||||||||||||||||||| Sbjct: 1003 cctcattgttgaaatatttca 983
>gb|BC066410.1| Danio rerio SET translocation (myeloid leukemia-associated) B, mRNA (cDNA clone MGC:77152 IMAGE:6961288), complete cds Length = 1790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 atcggtgaaccaggtgaagaa 458 ||||||||||||||||||||| Sbjct: 756 atcggtgaaccaggtgaagaa 736
>emb|AL159971.26| Human DNA sequence from clone RP11-150L15 on chromosome 13, complete sequence Length = 104436 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aagtcaaacacaaaacaaaac 155 ||||||||||||||||||||| Sbjct: 33786 aagtcaaacacaaaacaaaac 33766
>emb|AL157886.13| Human DNA sequence from clone RP11-59M22 on chromosome 9q21.31-21.33, complete sequence Length = 156956 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 aacacaaaacaaaacagtctt 161 ||||||||||||||||||||| Sbjct: 86839 aacacaaaacaaaacagtctt 86859
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 cctcattgttgaaatatttca 358 ||||||||||||||||||||| Sbjct: 890848 cctcattgttgaaatatttca 890868
>gb|AC008872.6| Homo sapiens chromosome 5 clone CTD-2198D21, complete sequence Length = 128703 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 caacctcattgttgaaatatttcaa 359 |||||||||||||||| |||||||| Sbjct: 72916 caacctcattgttgaattatttcaa 72940
>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1, complete sequence Length = 160094 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 taagtcaaacacaaaacaaaa 154 ||||||||||||||||||||| Sbjct: 158065 taagtcaaacacaaaacaaaa 158045
>ref|NM_201468.1| Danio rerio SET translocation (myeloid leukemia-associated) B (setb), mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 atcggtgaaccaggtgaagaa 458 ||||||||||||||||||||| Sbjct: 802 atcggtgaaccaggtgaagaa 782
>gb|AC153790.10| Mus musculus chromosome 1, clone RP23-424F11, complete sequence Length = 189707 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tcagggaagcaccaaagacaa 240 ||||||||||||||||||||| Sbjct: 102266 tcagggaagcaccaaagacaa 102246
>emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on chromosome X, complete sequence Length = 212659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 agtcaaacacaaaacaaaaca 156 ||||||||||||||||||||| Sbjct: 67473 agtcaaacacaaaacaaaaca 67493
>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acacaaaacaaaacagtctt 161 |||||||||||||||||||| Sbjct: 103678 acacaaaacaaaacagtctt 103659
>ref|NM_001030691.1| Gallus gallus SET translocation (myeloid leukemia-associated) (SET), mRNA Length = 4242 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaactttct 465 ||||||||||| |||||||||||| Sbjct: 597 gtgaaccaggtaaagaaactttct 574
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence Length = 203838 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcaaacacaaaacaaaacag 157 |||||||||||||||||||| Sbjct: 8564 tcaaacacaaaacaaaacag 8583
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||||||||||| ||||||||||| Sbjct: 73235 ctaagtcaaacaaaaaacaaaaca 73212
>gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, complete sequence Length = 191261 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||||||||| ||||||||||||| Sbjct: 32065 ctaagtcaaaaacaaaacaaaaca 32088
>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence Length = 163116 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cattgttgaaatatttcaat 360 |||||||||||||||||||| Sbjct: 99542 cattgttgaaatatttcaat 99561
>gb|AC110734.9| Mus musculus chromosome 1, clone RP24-113C15, complete sequence Length = 134073 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 104836 acaaaacaaaacagtcttga 104817
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaacacaaaacaaaacagtc 159 |||||||||||||||||||| Sbjct: 157488 aaacacaaaacaaaacagtc 157469
>gb|AC127556.4| Mus musculus BAC clone RP24-344J6 from chromosome 19, complete sequence Length = 214042 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tcaaacacaaaacaaaacag 157 |||||||||||||||||||| Sbjct: 65342 tcaaacacaaaacaaaacag 65323
>emb|AL591543.22| Human DNA sequence from clone RP13-198D9 on chromosome 9 Contains a novel gene (KIAA2015), a novel gene, a tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB) pseudogene and two CpG islands, complete sequence Length = 179501 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gtcaaacacaaaacaaaaca 156 |||||||||||||||||||| Sbjct: 102736 gtcaaacacaaaacaaaaca 102755
>emb|AL357773.15| Human DNA sequence from clone RP11-228D23 on chromosome 9, complete sequence Length = 32875 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 catcagggaagcaccaaaga 237 |||||||||||||||||||| Sbjct: 8469 catcagggaagcaccaaaga 8450
>emb|AL354796.21| Human DNA sequence from clone RP11-145E17 on chromosome 9 Contains the 5'end of a novel gene (FLJ00318), a novel gene and two CpG islands, complete sequence Length = 156466 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gggaagcaccaaagacaacc 242 |||||||||||||||||||| Sbjct: 35536 gggaagcaccaaagacaacc 35555
>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence Length = 199310 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcagcaagttaaattgt 31 |||||||||||||||||||| Sbjct: 190009 tcatcagcaagttaaattgt 189990
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence Length = 217029 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcagcaagttaaattgt 31 |||||||||||||||||||| Sbjct: 181648 tcatcagcaagttaaattgt 181629
>gb|AC157795.4| Mus musculus chromosome 1, clone RP24-122B24, complete sequence Length = 158636 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 137763 acaaaacaaaacagtcttga 137782
>gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's Hospital Oakland Research Institute) complete sequence Length = 224778 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tcaaacacaaaacaaaacag 157 |||||||||||||||||||| Sbjct: 152441 tcaaacacaaaacaaaacag 152422
>emb|CR378671.1| Photobacterium profundum SS9; segment 9/12 Length = 349688 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 ttaatcgcattcccattaat 515 |||||||||||||||||||| Sbjct: 303182 ttaatcgcattcccattaat 303201
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tcaaacacaaaacaaaacag 157 |||||||||||||||||||| Sbjct: 108398 tcaaacacaaaacaaaacag 108379
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||| ||||||||||||||||||| Sbjct: 243474 ctaactcaaacacaaaacaaaaca 243451
>emb|AJ851581.1| Gallus gallus mRNA for hypothetical protein, clone 8c13 Length = 4242 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaactttct 465 ||||||||||| |||||||||||| Sbjct: 597 gtgaaccaggtaaagaaactttct 574
>emb|CR933542.3| Mouse DNA sequence from clone DN-476D14 on chromosome 11, complete sequence Length = 47485 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||| ||||||||||||||||||| Sbjct: 22739 ctaactcaaacacaaaacaaaaca 22716
>gb|AY103462.1| Mus musculus macrophage galactose-type C-type lectin 2 (Mgl2) gene, complete cds Length = 9493 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||| ||||||||||||||||||| Sbjct: 2943 ctaactcaaacacaaaacaaaaca 2920
>gb|AC091708.2| Gallus gallus clone XXbac-68C5, complete sequence Length = 124309 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 116914 acaaaacaaaacagtcttga 116933
>gb|AC084760.2| Gallus gallus clone WAG-65N20, complete sequence Length = 109569 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 33544 acaaaacaaaacagtcttga 33563
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence Length = 186734 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcagcaagttaaattgt 31 |||||||||||||||||||| Sbjct: 92867 tcatcagcaagttaaattgt 92848
>gb|AC096571.1| Homo sapiens BAC clone RP11-395B18 from 4, complete sequence Length = 93638 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cacaaatcttctttgatgat 389 |||||||||||||||||||| Sbjct: 52525 cacaaatcttctttgatgat 52506
>gb|AC092436.5| Homo sapiens BAC clone RP11-302F12 from 4, complete sequence Length = 202133 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 aatggaagtggcatttattg 556 |||||||||||||||||||| Sbjct: 187721 aatggaagtggcatttattg 187702
>gb|AC163701.4| Gallus gallus BAC clone CH261-117C7 from chromosome unknown, complete sequence Length = 239874 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 103362 acaaaacaaaacagtcttga 103343
>dbj|AK164168.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630032G18 product:RAD1 homolog (S. pombe), full insert sequence Length = 4207 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 |||||||||| ||||||||||||| Sbjct: 1742 ctaagtcaaaaacaaaacaaaaca 1719
>ref|XM_701656.1| PREDICTED: Danio rerio similar to SET translocation (myeloid leukemia-associated) A, transcript variant 3 (LOC557530), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 816 gtgaaccaggtgaagaaact 797
>ref|XM_701655.1| PREDICTED: Danio rerio similar to SET translocation (myeloid leukemia-associated) A, transcript variant 2 (LOC557530), mRNA Length = 901 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 798 gtgaaccaggtgaagaaact 779
>ref|XM_677799.1| PREDICTED: Danio rerio similar to SET translocation (myeloid leukemia-associated) A, transcript variant 1 (LOC557530), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 798 gtgaaccaggtgaagaaact 779
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8, complete sequence Length = 187161 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 62269 gtgaaccaggtgaagaaact 62288
>ref|NM_201475.1| Danio rerio SET translocation (myeloid leukemia-associated) A (seta), mRNA Length = 1715 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 781 gtgaaccaggtgaagaaact 762
>gb|AC079922.5| Homo sapiens BAC clone RP11-368A17 from 2, complete sequence Length = 140678 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acaaaacaaaacagtcttga 163 |||||||||||||||||||| Sbjct: 64167 acaaaacaaaacagtcttga 64186
>gb|BC046082.1| Danio rerio SET translocation (myeloid leukemia-associated) A, mRNA (cDNA clone MGC:56333 IMAGE:5603762), complete cds Length = 1715 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaact 461 |||||||||||||||||||| Sbjct: 781 gtgaaccaggtgaagaaact 762
>gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53 of 118 of the complete sequence Length = 228547 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cattgttgaaatatttcaat 360 |||||||||||||||||||| Sbjct: 58152 cattgttgaaatatttcaat 58133
>dbj|AP005900.1| Homo sapiens genomic DNA, chromosome 18p clone:RP11-931H21, complete sequence Length = 215253 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 ||||| |||||||||||||||||| Sbjct: 20960 ctaagacaaacacaaaacaaaaca 20937
>emb|AL732502.32| Mouse DNA sequence from clone RP23-292G12 on chromosome 4, complete sequence Length = 173351 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccaaagacaaccaagggctc 250 |||||||||||||||||||| Sbjct: 124057 ccaaagacaaccaagggctc 124076
>gb|AC005524.1|AC005524 Homo sapiens chromosome 19, cosmid R30149, complete sequence Length = 35800 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 catgacttcacccttcagac 191 |||||||||||||||||||| Sbjct: 3237 catgacttcacccttcagac 3256
>gb|L31790.1|L31790 Drosophila melanogaster (P1 DS00846 (D02)) DNA sequence, complete sequence Length = 77447 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cattgttgaaatatttcaat 360 |||||||||||||||||||| Sbjct: 17395 cattgttgaaatatttcaat 17414
>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete sequence Length = 107108 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcaaacacaaaacaaaacag 157 |||||||||||||||||||| Sbjct: 58471 tcaaacacaaaacaaaacag 58490
>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence Length = 338234 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cattgttgaaatatttcaat 360 |||||||||||||||||||| Sbjct: 125566 cattgttgaaatatttcaat 125585
>emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chromosome 4, complete sequence Length = 153899 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gtcaaacacaaaacaaaaca 156 |||||||||||||||||||| Sbjct: 8771 gtcaaacacaaaacaaaaca 8752
>dbj|AB022691.1| Xenopus laevis mRNA for TAF-Ibeta1, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gtgaaccaggtgaagaaactttct 465 |||||||| ||||||||||||||| Sbjct: 693 gtgaaccaagtgaagaaactttct 670
>dbj|AP005118.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-22C7, complete sequences Length = 166857 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctaagtcaaacacaaaacaaaaca 156 ||||| |||||||||||||||||| Sbjct: 137727 ctaagacaaacacaaaacaaaaca 137704 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,850,987 Number of Sequences: 3902068 Number of extensions: 5850987 Number of successful extensions: 152579 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 152325 Number of HSP's gapped (non-prelim): 244 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)