>gb|BT009303.1| Triticum aestivum clone wlm1.pk0014.g10:fis, full insert mRNA
           sequence
          Length = 813

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/95 (87%), Gaps = 7/95 (7%)
 Strand = Plus / Minus

                                                                       
Query: 122 acctcaatcggaaaaagaacactgtatatgatcgattgatgatgatctacaataccaaaa 181
           |||||||||  |||| ||||||||||||||||||||||||      ||||||||||||||
Sbjct: 647 acctcaatcaaaaaaggaacactgtatatgatcgattgat------ctacaataccaaaa 594

                                              
Query: 182 cgtgtagatgctaaatcgacgacga-tattacgta 215
           |||| |||| ||||||||||||||| |||||||||
Sbjct: 593 cgtgcagatactaaatcgacgacgagtattacgta 559

>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
             complete sequence
          Length = 181165

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 224   gaaatctttcctacgtattactagtatttatt 255
             ||||| ||||||||| ||||||||||||||||
Sbjct: 39314 gaaatgtttcctacgaattactagtatttatt 39345

>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence
          Length = 175586

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 224   gaaatctttcctacgtattactagtatttatt 255
             ||||| ||||||||| ||||||||||||||||
Sbjct: 66328 gaaatgtttcctacgaattactagtatttatt 66359

>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence
          Length = 185786

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    aaaaagaacactgtatatgat 153
              |||||||||||||||||||||
Sbjct: 115434 aaaaagaacactgtatatgat 115454

>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence
          Length = 227254

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   aaaaagaacactgtatatgat 153
             |||||||||||||||||||||
Sbjct: 24655 aaaaagaacactgtatatgat 24635

>gb|AC005572.1| Homo sapiens chromosome 5, PAC clone 248b21 (LBNL H141), complete
             sequence
          Length = 95448

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ggaaaaagaacactgtatat 150
             ||||||||||||||||||||
Sbjct: 68705 ggaaaaagaacactgtatat 68724

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1383589 ccaaaacgtgtagatgctaa 1383570

>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1455713 ccaaaacgtgtagatgctaa 1455694

>gb|AE006601.1| Streptococcus pyogenes M1 GAS, section 130 of 167 of the complete
            genome
          Length = 10724

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ccaaaacgtgtagatgctaa 195
            ||||||||||||||||||||
Sbjct: 5639 ccaaaacgtgtagatgctaa 5620

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1460641 ccaaaacgtgtagatgctaa 1460622

>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1401932 ccaaaacgtgtagatgctaa 1401913

>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1477174 ccaaaacgtgtagatgctaa 1477155

>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1378042 ccaaaacgtgtagatgctaa 1378023

>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13,
             complete sequence
          Length = 154017

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   cgtattactagtatttatta 256
             ||||||||||||||||||||
Sbjct: 87998 cgtattactagtatttatta 87979

>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1453190 ccaaaacgtgtagatgctaa 1453171

>emb|CR848057.6| Zebrafish DNA sequence from clone DKEYP-84H9 in linkage group 16,
              complete sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     cttccttatacaaaccgaaa 100
              ||||||||||||||||||||
Sbjct: 178185 cttccttatacaaaccgaaa 178204

>emb|AL833072.2|HSM804383 Homo sapiens genomic DNA; cDNA DKFZp451D0119 (from clone
            DKFZp451D0119)
          Length = 5281

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  ggaaaaagaacactgtatat 150
            ||||||||||||||||||||
Sbjct: 3485 ggaaaaagaacactgtatat 3466

>emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in linkage group 14,
             complete sequence
          Length = 161413

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   tactagtatttattagtaga 261
             ||||||||||||||||||||
Sbjct: 82114 tactagtatttattagtaga 82095

>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence
          Length = 258929

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    ggaaaaagaacactgtatat 150
              ||||||||||||||||||||
Sbjct: 120565 ggaaaaagaacactgtatat 120584

>gb|AE010083.1| Streptococcus pyogenes strain MGAS8232, section 131 of 173 of the
            complete genome
          Length = 10725

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ccaaaacgtgtagatgctaa 195
            ||||||||||||||||||||
Sbjct: 5640 ccaaaacgtgtagatgctaa 5621

>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     ccaaaacgtgtagatgctaa 195
               ||||||||||||||||||||
Sbjct: 1492139 ccaaaacgtgtagatgctaa 1492120

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ccaaaacgtgtagatgctaa 195
              ||||||||||||||||||||
Sbjct: 404731 ccaaaacgtgtagatgctaa 404750

>emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in linkage group 14, complete
              sequence
          Length = 135252

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tactagtatttattagtaga 261
              ||||||||||||||||||||
Sbjct: 126941 tactagtatttattagtaga 126960

>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14,
             complete sequence
          Length = 218922

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   tactagtatttattagtaga 261
             ||||||||||||||||||||
Sbjct: 33528 tactagtatttattagtaga 33547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,795,614
Number of Sequences: 3902068
Number of extensions: 1795614
Number of successful extensions: 28644
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28580
Number of HSP's gapped (non-prelim): 64
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)