ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009342.1| Triticum aestivum clone wlm4.pk0018.d5:fis, full ... 339 6e-90
2gb|AY103609.1| Zea mays PCO093348 mRNA sequence 113 7e-22
3gb|BT017097.1| Zea mays clone EL01N0361G05.c mRNA sequence 109 1e-20
4emb|AJ007665.1|ZMA7665 Zea mays mRNA for cytosolic seryl-tRNA sy... 109 1e-20
5ref|NM_193493.1| Oryza sativa (japonica cultivar-group), predic... 100 1e-17
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
7dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
8dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
9dbj|AK105730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
10dbj|AK069764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 2e-16
12gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 96 2e-16
13gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 96 2e-16
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
15dbj|AK103101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
16dbj|AK059522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
17ref|NM_122629.2| Arabidopsis thaliana ATP binding / serine-tRNA ... 62 2e-06
18emb|Z70313.1|ATSTRNSN A.thaliana mRNA for seryl-tRNA synthetase 62 2e-06
19gb|AY051054.1| Arabidopsis thaliana putative seryl-tRNA syntheta... 62 2e-06
20gb|AF360352.1| Arabidopsis thaliana putative seryl-tRNA syntheta... 62 2e-06
21emb|BX831358.1|CNS0A1RI Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
22gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chro... 62 2e-06
23gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from chro... 62 2e-06
24emb|AL132772.14|HS1013A22 Human DNA sequence from clone RP5-1013... 44 0.53
25emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 44 0.53
26gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete... 42 2.1
27gb|AC073635.8| Homo sapiens BAC clone RP11-275G11 from 7, comple... 42 2.1
28ref|XM_504912.1| Yarrowia lipolytica CLIB122, YALI0F02629g predi... 42 2.1
29emb|AL139350.17| Human DNA sequence from clone RP11-307O10 on ch... 42 2.1
30emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on ... 42 2.1
31emb|AL133642.1|HSM801511 Homo sapiens mRNA; cDNA DKFZp586G1721 (... 42 2.1
32emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, c... 42 2.1
33emb|CR625594.1| full-length cDNA clone CS0DF026YM07 of Fetal bra... 42 2.1
34gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete se... 42 2.1
35gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, co... 42 2.1
36gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, co... 42 2.1
37gb|AC025561.6| Homo sapiens BAC clone RP11-673E21 from 4, comple... 42 2.1
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
39dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
40dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
41emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 i... 42 2.1
42gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 42 2.1
43emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-7... 42 2.1
44gb|AC146596.4| Mus musculus BAC clone RP24-175L7 from 13, comple... 42 2.1
45emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.1
46gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 42 2.1
47ref|NM_001030789.1| Gallus gallus RCSD domain containing 1 (RCSD... 40 8.2
48ref|XM_526294.1| PREDICTED: Pan troglodytes similar to Krueppel-... 40 8.2
49gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.2
50gb|AE017141.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.2
51gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hos... 40 8.2
52gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 8.2
53gb|DQ508104.1| Homo sapiens mitogen-activated protein kinase 1 (... 40 8.2
54gb|AE009952.1| Yersinia pestis KIM, complete genome 40 8.2
55gb|AY815817.1| Schistosoma japonicum SJCHGC05394 protein mRNA, p... 40 8.2
56gb|AC123719.10| Mus musculus chromosome 13, clone RP23-412A14, c... 40 8.2
57ref|XM_848885.1| PREDICTED: Canis familiaris similar to Homeobox... 40 8.2
58emb|CR932998.12| Zebrafish DNA sequence from clone DKEY-111I23 i... 40 8.2
59gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosom... 40 8.2
60ref|XM_669976.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.2
61emb|AL731575.3| Human DNA sequence from clone RP11-328K22 on chr... 40 8.2
62emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chr... 40 8.2
63gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, comp... 40 8.2
64gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, co... 40 8.2
65emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 8.2
66emb|AJ414154.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.2
67emb|AJ414143.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.2
68emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 i... 40 8.2
69emb|AJ719861.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.2
70emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 i... 40 8.2
71emb|AL772274.8| Zebrafish DNA sequence from clone CH211-196D14 i... 40 8.2
72gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosom... 40 8.2
73emb|CR606072.1| full-length cDNA clone CS0DI007YC16 of Placenta ... 40 8.2
74gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, comple... 40 8.2
75dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, ... 40 8.2
76gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence 40 8.2
77emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on ch... 40 8.2
78gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosom... 40 8.2
79gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate h... 40 8.2
80emb|BX294126.10| Zebrafish DNA sequence from clone DKEYP-35B8 in... 40 8.2
81gb|AC021843.6|AC021843 Homo sapiens chromosome 18, clone RP11-71... 40 8.2
82dbj|AB111925.2| Oryzias latipes gene, complete cds 40 8.2
83gb|AC073069.6| Homo sapiens BAC clone RP11-173N21 from 2, comple... 40 8.2
84gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, comple... 40 8.2
85gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromos... 40 8.2
86gb|AF127615.1|AF127615 Idiospermum australiense chloroplast atpB... 40 8.2
87dbj|AB025610.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
88gb|AC063919.15| Homo sapiens 3 BAC RP11-71E19 (Roswell Park Canc... 40 8.2
89emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 8.2
90gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosom... 40 8.2
91gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosom... 40 8.2
92emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chro... 40 8.2
93dbj|AP005264.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.2
94emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chr... 40 8.2
95emb|AL929116.4| Zebrafish DNA sequence from clone CH211-193C7, c... 40 8.2
96emb|AL732441.10| Mouse DNA sequence from clone RP23-142N2 on chr... 40 8.2
97gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Can... 40 8.2
98dbj|AP000555.1| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 8.2
99dbj|AP005117.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 8.2 
>gb|BT009342.1| Triticum aestivum clone wlm4.pk0018.d5:fis, full insert mRNA sequence
          Length = 1719

 Score =  339 bits (171), Expect = 6e-90
 Identities = 224/242 (92%), Gaps = 3/242 (1%)
 Strand = Plus / Minus

                                                                        
Query: 366  tcaagccgcatttccctttggtttagacttgttgggcttggagtcagcagcagcttgttt 425
            |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1518 tcaagctgcatttccctttggtttagacttattgggtttggagtcagcagcagcttgttt 1459

                                                                        
Query: 426  gctatcaa---gaggccgcttgaaaggaaggaaatctattccaagcatgaatggccgcaa 482
            ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 gctatcaacaagaggccgcttgaaaggaaggaaatctattccaagcatgaatggccgcaa 1399

                                                                        
Query: 483  caccactggcacctcaacaccaccctnccgctggtagttctccagaatacagcatagggt 542
            |||| ||||||| ||||||||||| | ||||||||||||||||||||||||||| || ||
Sbjct: 1398 cacctctggcacttcaacaccaccttcccgctggtagttctccagaatacagcaaagtgt 1339

                                                                        
Query: 543  cctctcagttgcagtcagcgtanagttcancatatgaacaaactgcttggattgctcatc 602
            |||||||||||||||||||||  | |||| ||||||||| |||||||| |||||||||||
Sbjct: 1338 cctctcagttgcagtcagcgtggaattcaacatatgaacgaactgcttcgattgctcatc 1279

              
Query: 603  at 604
            ||
Sbjct: 1278 at 1277



 Score =  192 bits (97), Expect = 9e-46
 Identities = 160/176 (90%), Gaps = 5/176 (2%)
 Strand = Plus / Minus

                                                                        
Query: 181  tagtcatgaaaaacactaatacactttgcagtaaata--gtgtccttgattgcaatactt 238
            ||||||||||||||| ||||| ||||||| ||||||   ||||||| |||||||||||||
Sbjct: 1690 tagtcatgaaaaacattaatatactttgcggtaaattatgtgtcctggattgcaatactt 1631

                                                                        
Query: 239  tgtaaccaaaac-atccaaaatgggacaccaaatcatcatcatgctacagacgactca-g 296
             ||||||||||| ||||||||||||| ||||||||||||||||||||||||| | ||  |
Sbjct: 1630 cgtaaccaaaaccatccaaaatgggagaccaaatcatcatcatgctacagaccattcttg 1571

                                                                    
Query: 297  aaattaataaaaaggaaggatgcatcattatctgcctggaaacaattttcagttca 352
            |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1570 aaattaataaaa-ggaagggtgcatcattatctgcctggaaacaattttcagttca 1516
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>gb|AY103609.1| Zea mays PCO093348 mRNA sequence
          Length = 1932

 Score =  113 bits (57), Expect = 7e-22
 Identities = 194/240 (80%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                        
Query: 365  ctcaagccgcatttccctttggtttagacttgttgggcttggagtcagcagcagcttgtt 424
            ||||||| ||||||||||||| ||| |||||||| |  ||||||||||||||   |||||
Sbjct: 1449 ctcaagcagcatttccctttgatttggacttgtttgatttggagtcagcagc---ttgtt 1393

                                                                        
Query: 425  tgctatcaagaggccgcttgaaaggaaggaaatctattccaagcatgaatggccgcaaca 484
            ||  ||| | |||  |||||||||||||||| |||||||||  |||  | ||| ||| | 
Sbjct: 1392 tggcatccaaaggttgcttgaaaggaaggaactctattccacccatataaggctgcagcg 1333

                                                                        
Query: 485  ccactggcacctcaacaccaccctnccgctggtagttctccagaatacagcatagggtcc 544
            ||  ||||||||| || ||  ||| |  |||| | |||||||| || || || |||||||
Sbjct: 1332 cctttggcacctcgacgccgtcctccttctggaaattctccaggatgcaacagagggtcc 1273

                                                                        
Query: 545  tctcagttgcagtcagcgtanagttcancatatgaacaaactgcttggattgctcatcat 604
            ||||||| |||||||  ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 1272 tctcagtggcagtcaaggtagagttcagcatatgaacaaactgcttggactgctcgtcat 1213
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>gb|BT017097.1| Zea mays clone EL01N0361G05.c mRNA sequence
          Length = 1308

 Score =  109 bits (55), Expect = 1e-20
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                       
Query: 520 ttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcancatatga 579
           |||||||||||||| || |||||||||||||| |||||||  ||| |||||| |||||||
Sbjct: 960 ttctccagaatacaacagagggtcctctcagtggcagtcaaggtagagttcagcatatga 901

                                    
Query: 580 acaaactgcttggattgctcatcat 604
           |||||||||||||| ||||||||||
Sbjct: 900 acaaactgcttggactgctcatcat 876



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 86/104 (82%), Gaps = 3/104 (2%)
 Strand = Plus / Minus

                                                                        
Query: 362  cagctcaagccgcatttccctttggtttagacttgttgggcttggagtcagcagcagctt 421
            |||||||||| ||||||||||||| ||| |||||||| |  |||||||   ||| |||||
Sbjct: 1115 cagctcaagcagcatttccctttgatttggacttgtttgatttggagt---cagaagctt 1059

                                                        
Query: 422  gtttgctatcaagaggccgcttgaaaggaaggaaatctattcca 465
            |||||  ||| | |||  ||||||||||||| || |||||||||
Sbjct: 1058 gtttgacatccaaaggttgcttgaaaggaagaaactctattcca 1015
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>emb|AJ007665.1|ZMA7665 Zea mays mRNA for cytosolic seryl-tRNA synthetase
          Length = 1907

 Score =  109 bits (55), Expect = 1e-20
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                        
Query: 520  ttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcancatatga 579
            |||||||||||||| || |||||||||||||| |||||||  ||| |||||| |||||||
Sbjct: 1271 ttctccagaatacaacagagggtcctctcagtggcagtcaaggtagagttcagcatatga 1212

                                     
Query: 580  acaaactgcttggattgctcatcat 604
            |||||||||||||| ||||||||||
Sbjct: 1211 acaaactgcttggactgctcatcat 1187



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 83/101 (82%), Gaps = 3/101 (2%)
 Strand = Plus / Minus

                                                                        
Query: 365  ctcaagccgcatttccctttggtttagacttgttgggcttggagtcagcagcagcttgtt 424
            ||||||| ||||||||||||| ||| |||||||| |  |||||||   ||| ||||||||
Sbjct: 1423 ctcaagcagcatttccctttgatttggacttgtttgatttggagt---cagaagcttgtt 1367

                                                     
Query: 425  tgctatcaagaggccgcttgaaaggaaggaaatctattcca 465
            ||  ||| | |||  ||||||||||||| || |||||||||
Sbjct: 1366 tgacatccaaaggttgcttgaaaggaagaaactctattcca 1326
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>ref|NM_193493.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                        
Query: 513  ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
            |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 1224 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 1165

                                            
Query: 573  catatgaacaaactgcttggattgctcatcat 604
            ||||||||| || |||||||||||||||||||
Sbjct: 1164 catatgaacgaattgcttggattgctcatcat 1133
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 513      ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
                |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 21175500 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 21175441

                                                
Query: 573      catatgaacaaactgcttggattgctcatcat 604
                ||||||||| || |||||||||||||||||||
Sbjct: 21175440 catatgaacgaattgcttggattgctcatcat 21175409



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 108      tgaaataacaaaataaataaa 128
                |||||||||||||||||||||
Sbjct: 24353990 tgaaataacaaaataaataaa 24354010
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>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144D11
          Length = 157943

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 513    ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
              |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 143045 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 142986

                                              
Query: 573    catatgaacaaactgcttggattgctcatcat 604
              ||||||||| || |||||||||||||||||||
Sbjct: 142985 catatgaacgaattgcttggattgctcatcat 142954
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>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1064G04
          Length = 186704

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 513   ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
             |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 73009 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 72950

                                             
Query: 573   catatgaacaaactgcttggattgctcatcat 604
             ||||||||| || |||||||||||||||||||
Sbjct: 72949 catatgaacgaattgcttggattgctcatcat 72918
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>dbj|AK105730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H03, full
            insert sequence
          Length = 1771

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                        
Query: 513  ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
            |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 1351 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 1292

                                            
Query: 573  catatgaacaaactgcttggattgctcatcat 604
            ||||||||| || |||||||||||||||||||
Sbjct: 1291 catatgaacgaattgcttggattgctcatcat 1260
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>dbj|AK069764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G18, full
            insert sequence
          Length = 1799

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                        
Query: 513  ctggtagttctccagaatacagcatagggtcctctcagttgcagtcagcgtanagttcan 572
            |||| ||||||||| ||||||||| |||||||||||||| |||||||  ||  |||||| 
Sbjct: 1386 ctggaagttctccaaaatacagcaaagggtcctctcagtggcagtcaatgttgagttcaa 1327

                                            
Query: 573  catatgaacaaactgcttggattgctcatcat 604
            ||||||||| || |||||||||||||||||||
Sbjct: 1326 catatgaacgaattgcttggattgctcatcat 1295
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 440     gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
               ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 5138515 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 5138456

                                                                           
Query: 500     caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
               |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 5138455 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 5138396

                                                    
Query: 560     gcgtanagttcancatatgaacaaactgcttggattg 596
                 ||  |||||| |||||||||||| |||||||||||
Sbjct: 5138395 atgttgagttcaacatatgaacaaattgcttggattg 5138359
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 440   gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
             ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 31190 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 31249

                                                                         
Query: 500   caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
             |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 31250 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 31309

                                                  
Query: 560   gcgtanagttcancatatgaacaaactgcttggattg 596
               ||  |||||| |||||||||||| |||||||||||
Sbjct: 31310 atgttgagttcaacatatgaacaaattgcttggattg 31346
to top
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                          
Query: 440    gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
              ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 118003 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 118062

                                                                          
Query: 500    caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
              |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 118063 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 118122

                                                   
Query: 560    gcgtanagttcancatatgaacaaactgcttggattg 596
                ||  |||||| |||||||||||| |||||||||||
Sbjct: 118123 atgttgagttcaacatatgaacaaattgcttggattg 118159
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 440     gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
               ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 5137732 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 5137673

                                                                           
Query: 500     caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
               |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 5137672 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 5137613

                                                    
Query: 560     gcgtanagttcancatatgaacaaactgcttggattg 596
                 ||  |||||| |||||||||||| |||||||||||
Sbjct: 5137612 atgttgagttcaacatatgaacaaattgcttggattg 5137576
to top
>dbj|AK103101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N18, full
            insert sequence
          Length = 1846

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                        
Query: 440  gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
            ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 1385 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 1326

                                                                        
Query: 500  caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
            |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 1325 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 1266

                                                 
Query: 560  gcgtanagttcancatatgaacaaactgcttggattg 596
              ||  |||||| |||||||||||| |||||||||||
Sbjct: 1265 atgttgagttcaacatatgaacaaattgcttggattg 1229
to top
>dbj|AK059522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C08, full
            insert sequence
          Length = 1842

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                        
Query: 440  gcttgaaaggaaggaaatctattccaagcatgaatggccgcaacaccactggcacctcaa 499
            ||||||||||||||||||| ||||||  |||| | ||  ||||  |   ||| || ||||
Sbjct: 1381 gcttgaaaggaaggaaatcgattccacccatgtaaggttgcaatgcttttggaacttcaa 1322

                                                                        
Query: 500  caccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtca 559
            |||||  || || |||| ||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 1321 caccattctccctctggaagttctccaaaatacagcaaagggtcctctcagtggcagtca 1262

                                                 
Query: 560  gcgtanagttcancatatgaacaaactgcttggattg 596
              ||  |||||| |||||||||||| |||||||||||
Sbjct: 1261 atgttgagttcaacatatgaacaaattgcttggattg 1225
to top
>ref|NM_122629.2| Arabidopsis thaliana ATP binding / serine-tRNA ligase/ tRNA ligase
            AT5G27470 mRNA, complete cds
          Length = 1670

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 1329 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 1270

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 1269 agtgtcgaattcagcatatgcacatactgctt 1238
to top
>emb|Z70313.1|ATSTRNSN A.thaliana mRNA for seryl-tRNA synthetase
          Length = 1615

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 1302 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 1243

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 1242 agtgtcgaattcagcatatgcacatactgctt 1211
to top
>gb|AY051054.1| Arabidopsis thaliana putative seryl-tRNA synthetase (AT5g27470) mRNA,
            complete cds
          Length = 1387

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 1250 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 1191

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 1190 agtgtcgaattcagcatatgcacatactgctt 1159
to top
>gb|AF360352.1| Arabidopsis thaliana putative seryl-tRNA synthetase (At5g27470) mRNA,
            complete cds
          Length = 1566

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 1301 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 1242

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 1241 agtgtcgaattcagcatatgcacatactgctt 1210
to top
>emb|BX831358.1|CNS0A1RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS81ZA08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1510

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 1315 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 1256

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 1255 agtgtcgaattcagcatatgcacatactgctt 1224
to top
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM,
            complete sequence
          Length = 107931

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 499  acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
            |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 6335 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 6276

                                            
Query: 559  agcgtanagttcancatatgaacaaactgctt 590
            || ||  | |||| |||||| ||| |||||||
Sbjct: 6275 agtgtcgaattcagcatatgcacatactgctt 6244
to top
>gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from chromosome V near 61 cM, complete
             sequence
          Length = 133195

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                         
Query: 499   acaccaccctnccgctggtagttctccagaatacagcatagggtcctctcagttgcagtc 558
             |||||| |||  |||||||||||||| ||||| ||||| | ||||||||| |||||||| 
Sbjct: 98687 acaccatcctctcgctggtagttctcgagaatgcagcaaatggtcctctctgttgcagta 98628

                                             
Query: 559   agcgtanagttcancatatgaacaaactgctt 590
             || ||  | |||| |||||| ||| |||||||
Sbjct: 98627 agtgtcgaattcagcatatgcacatactgctt 98596
to top
>emb|AL132772.14|HS1013A22 Human DNA sequence from clone RP5-1013A22 on chromosome 20 Contains
            the HNF4A gene for hepatocyte nuclear factor 4, a novel
            gene, the C20orf62 gene for chromosome 20 open reading
            frame 62, the RPL37AP1 gene for ribosomal protein L37a
            pseudogene 1 and the 5' end of the C20orf121 gene for
            chromosome 20 open reading frame 121, complete sequence
          Length = 83798

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 410  cagcagcagcttgtttgctatc 431
            ||||||||||||||||||||||
Sbjct: 3687 cagcagcagcttgtttgctatc 3666
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 246     aaaacatccaaaatgggacacc 267
               ||||||||||||||||||||||
Sbjct: 1953783 aaaacatccaaaatgggacacc 1953762
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>gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete sequence
          Length = 169851

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    taacaaaataaataaagttgt 133
              |||||||||||||||||||||
Sbjct: 100141 taacaaaataaataaagttgt 100121
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>gb|AC073635.8| Homo sapiens BAC clone RP11-275G11 from 7, complete sequence
          Length = 130822

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   tgaaataacaaaataaataaa 128
             |||||||||||||||||||||
Sbjct: 60122 tgaaataacaaaataaataaa 60142
to top
>ref|XM_504912.1| Yarrowia lipolytica CLIB122, YALI0F02629g predicted mRNA
          Length = 1362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 513  ctggtagttctccagaatacagcataggg 541
            |||||||||||||||||| ||||| ||||
Sbjct: 1236 ctggtagttctccagaatgcagcacaggg 1208
to top
>emb|AL139350.17| Human DNA sequence from clone RP11-307O10 on chromosome 20 Contains
             part of a novel gene, an EST, an STS and GSSs, complete
             sequence
          Length = 181585

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   aattaataaaaaggaaggatg 318
             |||||||||||||||||||||
Sbjct: 18577 aattaataaaaaggaaggatg 18597
to top
>emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on chromosome Xq21 Contains a
             novel pseudogene similar to RIKEN cDNA 6330577E15Rik, a
             pseudogene similar to ring finger protein 34 (RNF34) and
             the 3' end of the CHM gene for choroideremia (Rab escort
             protein 1), complete sequence
          Length = 206784

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   aaataacaaaataaataaagt 130
             |||||||||||||||||||||
Sbjct: 41758 aaataacaaaataaataaagt 41738
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>emb|AL133642.1|HSM801511 Homo sapiens mRNA; cDNA DKFZp586G1721 (from clone DKFZp586G1721)
          Length = 2917

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 458  ctattccaagcatgaatggcc 478
            |||||||||||||||||||||
Sbjct: 2089 ctattccaagcatgaatggcc 2069
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>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    atgtatagtcatgaaaaacac 196
              |||||||||||||||||||||
Sbjct: 195152 atgtatagtcatgaaaaacac 195172
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>emb|CR625594.1| full-length cDNA clone CS0DF026YM07 of Fetal brain of Homo sapiens
            (human)
          Length = 2282

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 458  ctattccaagcatgaatggcc 478
            |||||||||||||||||||||
Sbjct: 1528 ctattccaagcatgaatggcc 1508
to top
>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   gaaataacaaaataaataaag 129
             |||||||||||||||||||||
Sbjct: 32361 gaaataacaaaataaataaag 32381
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>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence
          Length = 161586

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tgaaataacaaaataaataaa 128
             |||||||||||||||||||||
Sbjct: 97472 tgaaataacaaaataaataaa 97452
to top
>gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, complete sequence
          Length = 207888

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  tgaaataacaaaataaataaa 128
            |||||||||||||||||||||
Sbjct: 2281 tgaaataacaaaataaataaa 2261
to top
>gb|AC025561.6| Homo sapiens BAC clone RP11-673E21 from 4, complete sequence
          Length = 154280

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    tctcagcatcttcatctctgc 57
             |||||||||||||||||||||
Sbjct: 49442 tctcagcatcttcatctctgc 49422
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 112     ataacaaaataaataaagttg 132
               |||||||||||||||||||||
Sbjct: 7538157 ataacaaaataaataaagttg 7538137
to top
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   tgaaataacaaaataaataaa 128
             |||||||||||||||||||||
Sbjct: 99894 tgaaataacaaaataaataaa 99914
to top
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0412C04
          Length = 146849

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   ataacaaaataaataaagttg 132
             |||||||||||||||||||||
Sbjct: 98088 ataacaaaataaataaagttg 98068
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>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19,
             complete sequence
          Length = 180950

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   tgaaataacaaaataaataaa 128
             |||||||||||||||||||||
Sbjct: 99551 tgaaataacaaaataaataaa 99571
to top
>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    taacaaaataaataaagttgt 133
              |||||||||||||||||||||
Sbjct: 321893 taacaaaataaataaagttgt 321913
to top
>emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-775G15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173039

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 458   ctattccaagcatgaatggcc 478
             |||||||||||||||||||||
Sbjct: 76814 ctattccaagcatgaatggcc 76794
to top
>gb|AC146596.4| Mus musculus BAC clone RP24-175L7 from 13, complete sequence
          Length = 163780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 117    aaaataaataaagttgtcgct 137
              |||||||||||||||||||||
Sbjct: 127388 aaaataaataaagttgtcgct 127368
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 513    ctggtagttctccagaatacagcataggg 541
              |||||||||||||||||| ||||| ||||
Sbjct: 389625 ctggtagttctccagaatgcagcacaggg 389653
to top
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 520    ttctccagaatacagcatagg 540
              |||||||||||||||||||||
Sbjct: 884053 ttctccagaatacagcatagg 884073
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>ref|NM_001030789.1| Gallus gallus RCSD domain containing 1 (RCSD1), mRNA
          Length = 3365

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  aacaccactggcacctcaac 500
            ||||||||||||||||||||
Sbjct: 1168 aacaccactggcacctcaac 1187
to top
>ref|XM_526294.1| PREDICTED: Pan troglodytes similar to Krueppel-like factor 15
           (Kidney-enriched kruppel-like factor) (LOC470911), mRNA
          Length = 3030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 ctcctcttgcagctcaagcc 372
           ||||||||||||||||||||
Sbjct: 435 ctcctcttgcagctcaagcc 416
to top
>gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 section 10 of 16 of the
              complete genome
          Length = 290294

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttgaaataacaaaataaata 126
              ||||||||||||||||||||
Sbjct: 198903 ttgaaataacaaaataaata 198884
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>gb|AE017141.1| Yersinia pestis biovar Medievalis str. 91001 section 15 of 16 of the
              complete genome
          Length = 293371

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    acaccaaatcatcatcatgc 282
              ||||||||||||||||||||
Sbjct: 148324 acaccaaatcatcatcatgc 148343
to top
>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 247588

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    catgtgatctcagcatcttc 49
             ||||||||||||||||||||
Sbjct: 83967 catgtgatctcagcatcttc 83948
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>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    gagtcagcagcagcttgttt 425
              ||||||||||||||||||||
Sbjct: 208640 gagtcagcagcagcttgttt 208659
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>gb|DQ508104.1| Homo sapiens mitogen-activated protein kinase 1 (MAPK1) gene, complete
              cds
          Length = 111954

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    ccgcatttccctttggttta 390
              ||||||||||||||||||||
Sbjct: 104747 ccgcatttccctttggttta 104766
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     acaccaaatcatcatcatgc 282
               ||||||||||||||||||||
Sbjct: 4114304 acaccaaatcatcatcatgc 4114323



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     ttgaaataacaaaataaata 126
               ||||||||||||||||||||
Sbjct: 1459314 ttgaaataacaaaataaata 1459295
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>gb|AY815817.1| Schistosoma japonicum SJCHGC05394 protein mRNA, partial cds
          Length = 1271

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 aacaaaataaataaagttgt 133
           ||||||||||||||||||||
Sbjct: 809 aacaaaataaataaagttgt 790
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>gb|AC123719.10| Mus musculus chromosome 13, clone RP23-412A14, complete sequence
          Length = 202533

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aataacaaaataaataaagt 130
             ||||||||||||||||||||
Sbjct: 67584 aataacaaaataaataaagt 67603
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>ref|XM_848885.1| PREDICTED: Canis familiaris similar to Homeobox protein HMX3
           (Homeobox protein Nkx-5.1) (LOC611245), mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  ctcagcatcttcatctctgc 57
           ||||||||||||||||||||
Sbjct: 159 ctcagcatcttcatctctgc 140
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>emb|CR932998.12| Zebrafish DNA sequence from clone DKEY-111I23 in linkage group 9,
              complete sequence
          Length = 218171

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tgaaataacaaaataaataa 127
              ||||||||||||||||||||
Sbjct: 160207 tgaaataacaaaataaataa 160188
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>gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosome 16, complete sequence
          Length = 180726

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    tgaaataacaaaataaataa 127
              ||||||||||||||||||||
Sbjct: 99987  tgaaataacaaaataaataa 100006
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>ref|XM_669976.1| Plasmodium berghei strain ANKA hypothetical protein (PB103700.00.0)
            partial mRNA
          Length = 1828

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  aattaataaaaaggaaggat 317
            ||||||||||||||||||||
Sbjct: 1719 aattaataaaaaggaaggat 1738
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>emb|AL731575.3| Human DNA sequence from clone RP11-328K22 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 96212

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tcactcctcttgcagctcaa 369
             ||||||||||||||||||||
Sbjct: 66205 tcactcctcttgcagctcaa 66186
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>emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 150937

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   ttgaaataacaaaataaata 126
             ||||||||||||||||||||
Sbjct: 30449 ttgaaataacaaaataaata 30430
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>gb|AC011276.12| Homo sapiens chromosome , clone RP11-13J17, complete sequence
          Length = 98967

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   tgaaataacaaaataaataa 127
             ||||||||||||||||||||
Sbjct: 73876 tgaaataacaaaataaataa 73895
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>gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, complete sequence
          Length = 158420

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tgaaataacaaaataaataa 127
              ||||||||||||||||||||
Sbjct: 149947 tgaaataacaaaataaataa 149928
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    acaccaaatcatcatcatgc 282
              ||||||||||||||||||||
Sbjct: 731609 acaccaaatcatcatcatgc 731590
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>emb|AJ414154.1| Yersinia pestis strain CO92 complete genome; segment 14/20
          Length = 204050

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ttgaaataacaaaataaata 126
             ||||||||||||||||||||
Sbjct: 88632 ttgaaataacaaaataaata 88651
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>emb|AJ414143.1| Yersinia pestis strain CO92 complete genome; segment 3/20
          Length = 201050

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  acaccaaatcatcatcatgc 282
            ||||||||||||||||||||
Sbjct: 2299 acaccaaatcatcatcatgc 2280
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>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5,
             complete sequence
          Length = 93211

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   acaaaataaataaagttgtc 134
             ||||||||||||||||||||
Sbjct: 79963 acaaaataaataaagttgtc 79944
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>emb|AJ719861.1| Gallus gallus mRNA for hypothetical protein, clone 7f20
          Length = 3365

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  aacaccactggcacctcaac 500
            ||||||||||||||||||||
Sbjct: 1168 aacaccactggcacctcaac 1187
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>emb|BX640470.7| Zebrafish DNA sequence from clone CH211-205H10 in linkage group 11,
              complete sequence
          Length = 131868

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    aaaaacactaatacactttg 208
              ||||||||||||||||||||
Sbjct: 106854 aaaaacactaatacactttg 106835
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>emb|AL772274.8| Zebrafish DNA sequence from clone CH211-196D14 in linkage group 11
              Contains five CpG islands, complete sequence
          Length = 189626

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    aaaaacactaatacactttg 208
              ||||||||||||||||||||
Sbjct: 162235 aaaaacactaatacactttg 162254
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>gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosome 3, complete
            sequence
          Length = 174425

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  aatactttgtaaccaaaaca 251
            ||||||||||||||||||||
Sbjct: 7707 aatactttgtaaccaaaaca 7688
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>emb|CR606072.1| full-length cDNA clone CS0DI007YC16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2359

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 ccgcatttccctttggttta 390
           ||||||||||||||||||||
Sbjct: 122 ccgcatttccctttggttta 141
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>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ttgcagtaaatagtgtcctt 225
             ||||||||||||||||||||
Sbjct: 34892 ttgcagtaaatagtgtcctt 34911
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>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
              homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     ctcagcatcttcatctctgc 57
              ||||||||||||||||||||
Sbjct: 198648 ctcagcatcttcatctctgc 198667
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>gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence
          Length = 168476

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aataacaaaataaataaagt 130
              ||||||||||||||||||||
Sbjct: 122524 aataacaaaataaataaagt 122543
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>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete
              sequence
          Length = 157571

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    tggagtcagcagcagcttgt 423
              ||||||||||||||||||||
Sbjct: 117369 tggagtcagcagcagcttgt 117388
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>gb|AC158979.2| Mus musculus BAC clone RP23-218C24 from chromosome 14, complete sequence
          Length = 216848

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tgcctggaaacaattttcag 348
              ||||||||||||||||||||
Sbjct: 154846 tgcctggaaacaattttcag 154865
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>gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
             partial sequence
          Length = 166617

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tgcctggaaacaattttcag 348
             ||||||||||||||||||||
Sbjct: 54494 tgcctggaaacaattttcag 54513
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>emb|BX294126.10| Zebrafish DNA sequence from clone DKEYP-35B8 in linkage group 2,
             complete sequence
          Length = 179476

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aatcatcatcatgctacaga 288
             ||||||||||||||||||||
Sbjct: 18886 aatcatcatcatgctacaga 18867
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>gb|AC021843.6|AC021843 Homo sapiens chromosome 18, clone RP11-713C1, complete sequence
          Length = 159480

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  aataacaaaataaataaagt 130
            ||||||||||||||||||||
Sbjct: 8572 aataacaaaataaataaagt 8591
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>dbj|AB111925.2| Oryzias latipes gene, complete cds
          Length = 70179

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ctcagcatcttcatctctgc 57
             ||||||||||||||||||||
Sbjct: 60953 ctcagcatcttcatctctgc 60934
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>gb|AC073069.6| Homo sapiens BAC clone RP11-173N21 from 2, complete sequence
          Length = 85787

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   actcagaaattaataaaaag 310
             ||||||||||||||||||||
Sbjct: 82913 actcagaaattaataaaaag 82932
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>gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, complete sequence
          Length = 118955

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   tgaaataacaaaataaataa 127
             ||||||||||||||||||||
Sbjct: 34738 tgaaataacaaaataaataa 34757
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>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete
             sequence
          Length = 197416

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cttgttgggcttggagtcag 412
             ||||||||||||||||||||
Sbjct: 40864 cttgttgggcttggagtcag 40883
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>gb|AF127615.1|AF127615 Idiospermum australiense chloroplast atpB-rbcL intergenic spacer
           sequence
          Length = 721

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 aaataacaaaataaataaag 129
           ||||||||||||||||||||
Sbjct: 193 aaataacaaaataaataaag 212
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>dbj|AB025610.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19A23
          Length = 9579

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  aaataacaaaataaataaag 129
            ||||||||||||||||||||
Sbjct: 8786 aaataacaaaataaataaag 8805
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>gb|AC063919.15| Homo sapiens 3 BAC RP11-71E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151196

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ctcctcttgcagctcaagcc 372
             ||||||||||||||||||||
Sbjct: 50357 ctcctcttgcagctcaagcc 50338
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 166    aatgcaacggatgtatagtcatgaaaaa 193
              ||||||||||||||| |||||| |||||
Sbjct: 144637 aatgcaacggatgtacagtcattaaaaa 144610
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>gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosome ul, complete
             sequence
          Length = 131280

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cttgttgggcttggagtcag 412
             ||||||||||||||||||||
Sbjct: 58250 cttgttgggcttggagtcag 58269
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>gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosome 3, complete sequence
          Length = 143247

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   aatactttgtaaccaaaaca 251
             ||||||||||||||||||||
Sbjct: 72416 aatactttgtaaccaaaaca 72435
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>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete
             sequence
          Length = 213294

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    catgtgatctcagcatcttcatct 53
             ||||||||||||||| ||||||||
Sbjct: 66424 catgtgatctcagcagcttcatct 66401
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>dbj|AP005264.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-64C12, complete
             sequence
          Length = 192539

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gaaataacaaaataaataaa 128
             ||||||||||||||||||||
Sbjct: 74219 gaaataacaaaataaataaa 74238
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>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete
             sequence
          Length = 107108

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   actttgtaaccaaaacatccaaaa 258
             |||||||||| |||||||||||||
Sbjct: 59416 actttgtaacaaaaacatccaaaa 59439
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>emb|AL929116.4| Zebrafish DNA sequence from clone CH211-193C7, complete sequence
          Length = 126123

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aatcatcatcatgctacaga 288
             ||||||||||||||||||||
Sbjct: 96593 aatcatcatcatgctacaga 96574
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>emb|AL732441.10| Mouse DNA sequence from clone RP23-142N2 on chromosome 2, complete
              sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    gaaataacaaaataaataaa 128
              ||||||||||||||||||||
Sbjct: 106128 gaaataacaaaataaataaa 106147
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>gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148811

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    aaataacaaaataaataaag 129
              ||||||||||||||||||||
Sbjct: 133615 aaataacaaaataaataaag 133634
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>dbj|AP000555.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
            clone:KB1027C11
          Length = 168813

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  ccgcatttccctttggttta 390
            ||||||||||||||||||||
Sbjct: 3307 ccgcatttccctttggttta 3288
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>dbj|AP005117.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-21G15, complete
              sequences
          Length = 148790

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    aacaaaataaataaagttgt 133
              ||||||||||||||||||||
Sbjct: 112135 aacaaaataaataaagttgt 112116


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,307,846
Number of Sequences: 3902068
Number of extensions: 8307846
Number of successful extensions: 177565
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 176953
Number of HSP's gapped (non-prelim): 605
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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