ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA,... 172 5e-40
2gb|BT016453.1| Zea mays clone Contig286 mRNA sequence 161 2e-36
3gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, parti... 161 2e-36
4gb|AY109362.1| Zea mays CL1892_2 mRNA sequence 161 2e-36
5gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase... 161 2e-36
6ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplas... 153 4e-34
7gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18... 153 4e-34
8dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 4e-34
9dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 4e-34
10gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRN... 145 1e-31
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 109 6e-21
12gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055... 109 6e-21
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 109 6e-21
14gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence 66 8e-08
15ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxid... 54 3e-04
16gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate de... 54 3e-04
17gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate de... 54 3e-04
18gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete s... 54 3e-04
19emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic mala... 50 0.005
20gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complet... 48 0.018
21ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxid... 42 1.1
22gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, ... 42 1.1
23emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 1.1
24emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (md... 42 1.1
25gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, co... 42 1.1
26gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate de... 42 1.1
27gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) ... 42 1.1
28gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; ... 42 1.1
29gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, co... 42 1.1
30gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrog... 42 1.1
31emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Co... 42 1.1
32emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Co... 42 1.1
33gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete s... 42 1.1
34gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDN... 40 4.4
35ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), ... 40 4.4
36gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, co... 40 4.4
37gb|BC068420.1| Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:69... 40 4.4
38gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple... 40 4.4
39gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete... 40 4.4
40emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic mal... 40 4.4
41emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chr... 40 4.4
42gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 4.4
43emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.4
44emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehyd... 40 4.4
45gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complet... 40 4.4
46dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN fu... 40 4.4
47dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 4.4
48gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, com... 40 4.4
49dbj|AB115700.1| Cryptococcus diffluens DNA, intergenic spacer 1 ... 40 4.4
50gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env ge... 40 4.4 
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds
          Length = 587

 Score =  172 bits (87), Expect = 5e-40
 Identities = 148/170 (87%)
 Strand = Plus / Minus

                                                                       
Query: 160 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
           ||||| ||||| || || |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 344 aggcacgagtaggcgagagccttctcctccgagagctcctgggctgtggcatccatcttc 285

                                                                       
Query: 220 ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
           || ||  ||||||| || |||||||||||||||||||||||||| |||||||||| ||| 
Sbjct: 284 tttcttgagaactcgtcgatcgggagcccttgaacaattgtccattcaccaccgcagcaa 225

                                                             
Query: 280 gttactgggaaggagtagataanaccanctnngacaccgtatgaaccatc 329
           ||||||||||||||||||||||  ||| |    |||||||||||||||||
Sbjct: 224 gttactgggaaggagtagataagcccagcaggcacaccgtatgaaccatc 175



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 107 cttttattcaaaacatcagagc 128
           ||||||||||||||||||||||
Sbjct: 396 cttttattcaaaacatcagagc 375
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>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence
          Length = 1354

 Score =  161 bits (81), Expect = 2e-36
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                        
Query: 151  atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 210
            |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 1087 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1028

                                                                        
Query: 211  tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacca 270
            ||||||||||||||  ||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 1027 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 968

                                
Query: 271  ccgctgcacgttactgggaa 290
            || ||||| |||||||||||
Sbjct: 967  ccactgcatgttactgggaa 948
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>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds
          Length = 529

 Score =  161 bits (81), Expect = 2e-36
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                       
Query: 151 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 210
           |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 335 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 276

                                                                       
Query: 211 tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacca 270
           ||||||||||||||  ||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 275 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 216

                               
Query: 271 ccgctgcacgttactgggaa 290
           || ||||| |||||||||||
Sbjct: 215 ccactgcatgttactgggaa 196
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>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence
          Length = 943

 Score =  161 bits (81), Expect = 2e-36
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                       
Query: 151 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 210
           |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 916 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 857

                                                                       
Query: 211 tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacca 270
           ||||||||||||||  ||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 856 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 797

                               
Query: 271 ccgctgcacgttactgggaa 290
           || ||||| |||||||||||
Sbjct: 796 ccactgcatgttactgggaa 777
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>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds
          Length = 1275

 Score =  161 bits (81), Expect = 2e-36
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                        
Query: 151  atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 210
            |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 1078 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1019

                                                                        
Query: 211  tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacca 270
            ||||||||||||||  ||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 1018 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 959

                                
Query: 271  ccgctgcacgttactgggaa 290
            || ||||| |||||||||||
Sbjct: 958  ccactgcatgttactgggaa 939
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>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate
            dehydrogenase (OSJNBa0055P24.3), mRNA
          Length = 1381

 Score =  153 bits (77), Expect = 4e-34
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1090 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1031

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||  ||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 1030 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 971

                                
Query: 280  gttactgggaaggagtagat 299
            ||||||||||| ||||||||
Sbjct: 970  gttactgggaacgagtagat 951
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>gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18 mRNA sequence
          Length = 360

 Score =  153 bits (77), Expect = 4e-34
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                       
Query: 160 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
           |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 175 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 116

                                                                       
Query: 220 ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
           |||||  ||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 115 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 56

                               
Query: 280 gttactgggaaggagtagat 299
           ||||||||||| ||||||||
Sbjct: 55  gttactgggaacgagtagat 36
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>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full
            insert sequence
          Length = 1326

 Score =  153 bits (77), Expect = 4e-34
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1096 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1037

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||  ||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 1036 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 977

                                
Query: 280  gttactgggaaggagtagat 299
            ||||||||||| ||||||||
Sbjct: 976  gttactgggaacgagtagat 957
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>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full
            insert sequence
          Length = 1392

 Score =  153 bits (77), Expect = 4e-34
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1101 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1042

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||  ||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 1041 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 982

                                
Query: 280  gttactgggaaggagtagat 299
            ||||||||||| ||||||||
Sbjct: 981  gttactgggaacgagtagat 962
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>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds
          Length = 1371

 Score =  145 bits (73), Expect = 1e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1081 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1022

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||  ||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 1021 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 962

                                
Query: 280  gttactgggaaggagtagat 299
            ||||| ||||| ||||||||
Sbjct: 961  gttaccgggaacgagtagat 942
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  109 bits (55), Expect = 6e-21
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                            
Query: 160      aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
                |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 17402508 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17402449

                                          
Query: 220      ttcctcnagaactcatcaatcgggag 245
                |||||  ||||||| || ||||||||
Sbjct: 17402448 ttccttgagaactcgtcgatcgggag 17402423



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 250      tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagat 299
                |||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 17402292 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagat 17402243
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>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete
             sequence
          Length = 134058

 Score =  109 bits (55), Expect = 6e-21
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                         
Query: 160   aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
             |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 31503 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 31444

                                       
Query: 220   ttcctcnagaactcatcaatcgggag 245
             |||||  ||||||| || ||||||||
Sbjct: 31443 ttccttgagaactcgtcgatcgggag 31418



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 250   tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagat 299
             |||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 31287 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagat 31238
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  109 bits (55), Expect = 6e-21
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                            
Query: 160      aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
                |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 17411548 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17411489

                                          
Query: 220      ttcctcnagaactcatcaatcgggag 245
                |||||  ||||||| || ||||||||
Sbjct: 17411488 ttccttgagaactcgtcgatcgggag 17411463



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 250      tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagat 299
                |||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 17411332 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagat 17411283
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>gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence
          Length = 282

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 151 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggc 203
           |||||||| |||||||||||||| |||| ||||||||||| |||||| |||||
Sbjct: 60  atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 8
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>ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330
            mRNA, complete cds
          Length = 1308

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 113/142 (79%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| ||  ||||||| |||  || |||||  || |||  ||||||||||
Sbjct: 1111 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1052

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||| |    ||||||||||| |  ||||||||||| ||||| || |||   | ||| 
Sbjct: 1051 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 992

                                  
Query: 280  gttactgggaaggagtagataa 301
            ||||| ||||||||||||||||
Sbjct: 991  gttacggggaaggagtagataa 970
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>gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase
           (At5g43330) mRNA, complete cds
          Length = 1030

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 113/142 (79%)
 Strand = Plus / Minus

                                                                       
Query: 160 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
           |||||||||||||| ||  ||||||| |||  || |||||  || |||  ||||||||||
Sbjct: 992 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 933

                                                                       
Query: 220 ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
           |||||| |    ||||||||||| |  ||||||||||| ||||| || |||   | ||| 
Sbjct: 932 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 873

                                 
Query: 280 gttactgggaaggagtagataa 301
           ||||| ||||||||||||||||
Sbjct: 872 gttacggggaaggagtagataa 851
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>gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase
            (At5g43330) mRNA, complete cds
          Length = 1198

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 113/142 (79%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| ||  ||||||| |||  || |||||  || |||  ||||||||||
Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||| |    ||||||||||| |  ||||||||||| ||||| || |||   | ||| 
Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946

                                  
Query: 280  gttactgggaaggagtagataa 301
            ||||| ||||||||||||||||
Sbjct: 945  gttacggggaaggagtagataa 924
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>gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete sequence
          Length = 1239

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 113/142 (79%)
 Strand = Plus / Minus

                                                                        
Query: 160  aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 219
            |||||||||||||| ||  ||||||| |||  || |||||  || |||  ||||||||||
Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006

                                                                        
Query: 220  ttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 279
            |||||| |    ||||||||||| |  ||||||||||| ||||| || |||   | ||| 
Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946

                                  
Query: 280  gttactgggaaggagtagataa 301
            ||||| ||||||||||||||||
Sbjct: 945  gttacggggaaggagtagataa 924
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>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone
            CanCMDH
          Length = 1399

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
            ||||| |||||||||  |||||||||| ||||  || |||||||||||| |||| || ||
Sbjct: 1008 atccaacttcttccttgagaactcatcgatcgaaagtccttgaacaattttccattcccc 949

                
Query: 270  accg 273
            ||||
Sbjct: 948  accg 945
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>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence
          Length = 195006

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 103    gtttcttttattcaaaacatcaga 126
              ||||||||||||||||||||||||
Sbjct: 131186 gtttcttttattcaaaacatcaga 131163
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>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410
            mRNA, complete cds
          Length = 1484

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
            |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 1087 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1028

                                            
Query: 270  accgctgcacgttactgggaaggagtagataa 301
            |  ||  || ||||| ||||||||||||||||
Sbjct: 1027 attgcgacaagttacagggaaggagtagataa 996
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>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds
          Length = 1312

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 160  aggcatgagtaagccagcgccttctcctc 188
            ||||||||||||||||  |||||||||||
Sbjct: 1044 aggcatgagtaagccaatgccttctcctc 1016
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>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
              sequence
          Length = 635328

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    atttactcaaggcatgagtaa 171
              |||||||||||||||||||||
Sbjct: 505077 atttactcaaggcatgagtaa 505057
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>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene)
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaat 257
            ||||| ||| |||||  ||||||||||||| || || |||||||||||
Sbjct: 1005 atccaactttttccttgagaactcatcaatgggaagtccttgaacaat 958
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>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds
          Length = 999

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 210 atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
           |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883

                                           
Query: 270 accgctgcacgttactgggaaggagtagataa 301
           |  ||  || ||||| ||||||||||||||||
Sbjct: 882 attgcgacaagttacagggaaggagtagataa 851
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>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1)
           mRNA, complete cds
          Length = 1491

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 202 gcggtcgcatccatcttcttcctcnagaactcatcaatcgggagcccttgaacaat 257
           ||||| || |||| |||||||||  |||| || ||||| | |||||||||||||||
Sbjct: 950 gcggttgcgtccaacttcttcctagagaattcgtcaatagagagcccttgaacaat 895
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>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds
          Length = 1223

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 210 atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
           |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883

                                           
Query: 270 accgctgcacgttactgggaaggagtagataa 301
           |  ||  || ||||| ||||||||||||||||
Sbjct: 882 attgcgacaagttacagggaaggagtagataa 851
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>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA,
            complete cds
          Length = 1314

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
            |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 1028 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 969

                                            
Query: 270  accgctgcacgttactgggaaggagtagataa 301
            |  ||  || ||||| ||||||||||||||||
Sbjct: 968  attgcgacaagttacagggaaggagtagataa 937
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>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds
          Length = 1309

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
            |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 1024 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 965

                                            
Query: 270  accgctgcacgttactgggaaggagtagataa 301
            |  ||  || ||||| ||||||||||||||||
Sbjct: 964  attgcgacaagttacagggaaggagtagataa 933
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>gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete
            cds
          Length = 1397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 211  tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacca 270
            |||| |||||||||  ||||||||||||| |  || |||||||| ||| |||| ||||||
Sbjct: 1002 tccaacttcttccttgagaactcatcaattgaaagtccttgaactattttccattcacca 943
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>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS3ZH07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 541

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 210 atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
           |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 252 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccactctcc 193

                                           
Query: 270 accgctgcacgttactgggaaggagtagataa 301
           |  ||  || ||||| ||||||||||||||||
Sbjct: 192 attgcgacaagttacagggaaggagtagataa 161
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>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS87ZA02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 600

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 210 atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
           |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 317 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 258

                                           
Query: 270 accgctgcacgttactgggaaggagtagataa 301
           |  ||  || ||||| ||||||||||||||||
Sbjct: 257 attgcgacaagttacagggaaggagtagataa 226
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>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 210  atccatcttcttcctcnagaactcatcaatcgggagcccttgaacaattgtccaatcacc 269
            |||||||||||||||  | |  ||||||||||| || ||||| |||||  |||| || ||
Sbjct: 1064 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1005

                                            
Query: 270  accgctgcacgttactgggaaggagtagataa 301
            |  ||  || ||||| ||||||||||||||||
Sbjct: 1004 attgcgacaagttacagggaaggagtagataa 973
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>gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514
           IMAGE:6409425), complete cds
          Length = 4640

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 aggtttcttttattcaaaac 120
           ||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747
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>ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), mRNA
          Length = 4640

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 aggtttcttttattcaaaac 120
           ||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747
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>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence
          Length = 206903

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tcagagcatcaactgctctt 141
              ||||||||||||||||||||
Sbjct: 126558 tcagagcatcaactgctctt 126539
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>gb|BC068420.1| Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:6970634), partial cds
          Length = 3309

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 176  gcgccttctcctccgacagctcct 199
            |||||||||||||||||| |||||
Sbjct: 2876 gcgccttctcctccgacacctcct 2899
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>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    aggtttcttttattcaaaac 120
              ||||||||||||||||||||
Sbjct: 123832 aggtttcttttattcaaaac 123851
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>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence
          Length = 188791

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    aggtttcttttattcaaaac 120
              ||||||||||||||||||||
Sbjct: 164232 aggtttcttttattcaaaac 164251
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>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase
           (mdh gene)
          Length = 773

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 79/99 (79%)
 Strand = Plus / Minus

                                                                       
Query: 159 aaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatctt 218
           |||||| ||||||||||  || || |||||||| |||||||  || |||   |||| |||
Sbjct: 546 aaggcaggagtaagccaatgctttttcctccgatagctcctcagctgtcaagtccaactt 487

                                                  
Query: 219 cttcctcnagaactcatcaatcgggagcccttgaacaat 257
           ||| ||  ||||||| ||||| || || |||||||||||
Sbjct: 486 ctttcttgagaactcgtcaattggaagaccttgaacaat 448
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>emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chromosome 13 Contains 2
              NADH dehydrogenase pseudogenes and a novel gene, complete
              sequence
          Length = 172064

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    aggtttcttttattcaaaacatca 124
              |||||||||||||| |||||||||
Sbjct: 166793 aggtttcttttattaaaaacatca 166816
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>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete
             sequence
          Length = 205508

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    gtgcagctgttctgggtgga 80
             ||||||||||||||||||||
Sbjct: 41094 gtgcagctgttctgggtgga 41113
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     cgctggaaaccagcgaaaag 44
              ||||||||||||||||||||
Sbjct: 179362 cgctggaaaccagcgaaaag 179381
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>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene)
          Length = 1328

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                          
Query: 211 tccatcttcttcctcnagaactcatcaatcgggagcccttgaacaat 257
           |||| |||||| ||  ||||||||||||| || || |||||||||||
Sbjct: 996 tccaacttctttcttgagaactcatcaattggaagaccttgaacaat 950
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>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence
          Length = 173840

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 100    aaggtttcttttattcaaaacatc 123
              ||||||||||||||| ||||||||
Sbjct: 120506 aaggtttcttttattgaaaacatc 120483
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>dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched
           library, clone:G630093B19 product:phosphorylase kinase
           beta, full insert sequence
          Length = 1015

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 aggtttcttttattcaaaac 120
           ||||||||||||||||||||
Sbjct: 723 aggtttcttttattcaaaac 742
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>dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730039M10
           product:similar to phosphorylase kinase (EC 2.7.1.38)
           beta chain [Homo sapiens], full insert sequence
          Length = 1972

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 aggtttcttttattcaaaac 120
           ||||||||||||||||||||
Sbjct: 766 aggtttcttttattcaaaac 785
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>gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, complete sequence
          Length = 37581

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  tcgcatccatcttcttcctc 225
            ||||||||||||||||||||
Sbjct: 6104 tcgcatccatcttcttcctc 6123
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>dbj|AB115700.1| Cryptococcus diffluens DNA, intergenic spacer 1 region
          Length = 603

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 aatcaccaccgctgcacgtt 282
           ||||||||||||||||||||
Sbjct: 461 aatcaccaccgctgcacgtt 442
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>gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env gene, partial cds (a11)
          Length = 396

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ttattcaaaacatcagagca 129
           ||||||||||||||||||||
Sbjct: 206 ttattcaaaacatcagagca 187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,533,381
Number of Sequences: 3902068
Number of extensions: 2533381
Number of successful extensions: 42914
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 42793
Number of HSP's gapped (non-prelim): 105
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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