Clone Name	rbasd22l13
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_483183.1| Oryza sativa (japonica cultivar-group), mRNA	517	e-143
2	dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clon...	517	e-143
3	emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6...	517	e-143
4	gb|AY104920.1| Zea mays PCO100740 mRNA sequence	482	e-133
5	gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence	474	e-130
6	ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mR...	133	8e-28
7	gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit ...	133	8e-28
8	gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA,...	133	8e-28
9	emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Co...	133	8e-28
10	emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Co...	133	8e-28
11	gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900)...	129	1e-26
12	ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mR...	127	5e-26
13	gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) ...	127	5e-26
14	gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit ...	127	5e-26
15	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	127	5e-26
16	emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Co...	127	5e-26
17	gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete s...	127	5e-26
18	gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protei...	127	5e-26
19	dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D...	127	5e-26
20	gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome sub...	119	1e-23
21	emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ...	80	1e-11
22	emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 ...	80	1e-11
23	dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	72	3e-09
24	dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
25	dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
26	dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
27	dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
28	emb|AL590403.13| Human DNA sequence from clone RP13-459B11 on ch...	46	0.15
29	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
30	dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.15
31	emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in...	46	0.15
32	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	46	0.15
33	emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727...	46	0.15
34	emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374...	46	0.15
35	emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chr...	42	2.3
36	gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Can...	42	2.3
37	gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, com...	42	2.3
38	gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, comp...	40	9.0
39	ref|XM_519247.1| PREDICTED: Pan troglodytes similar to COP9 sign...	40	9.0
40	gb|AC167548.1| Mus musculus chromosome 18, clone wi1-1164C4, com...	40	9.0
41	gb|U12964.1| Caenorhabditis elegans cosmid F26F4, complete sequence	40	9.0
42	ref|XM_414316.1| PREDICTED: Gallus gallus LOC415973 (LOC415973),...	40	9.0
43	gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosom...	40	9.0
44	gb|AC125518.3| Mus musculus BAC clone RP24-267E6 from chromosome...	40	9.0
45	ref|XM_720855.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	40	9.0
46	gb|AC112655.4| Homo sapiens X BAC RP11-286G7 (Roswell Park Cance...	40	9.0
47	emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 i...	40	9.0
48	emb|BX537322.5| Zebrafish DNA sequence from clone CH211-80L5 in ...	40	9.0
49	emb|CR524392.1| Gallus gallus finished cDNA, clone ChEST275g2	40	9.0
50	gb|AC146015.4| Pan troglodytes BAC clone RP43-129D8 from chromos...	40	9.0
51	gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome...	40	9.0
52	ref|NM_065625.2| Caenorhabditis elegans NHL (ring finger b-box c...	40	9.0
53	emb|BX510304.12| Mouse DNA sequence from clone RP23-128I6 on chr...	40	9.0
54	gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, compl...	40	9.0
55	gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, comp...	40	9.0
56	gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, com...	40	9.0
57	emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, ...	40	9.0
58	gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, comple...	40	9.0
59	emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 i...	40	9.0
60	emb|AL929190.3| Zebrafish DNA sequence from clone DKEY-77N11, co...	40	9.0

---

>ref|XM_483183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1408

 Score =  517 bits (261), Expect = e-143
 Identities = 381/421 (90%)
 Strand = Plus / Minus

                                                                        
Query: 237  atctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgtta 296
            |||||||||||||||||||||||||||||||||||||  || ||||| || || | ||||
Sbjct: 1085 atctacatgaaagcacctcggcctcctctcctggcagtcgacctctcgtatgtcgcgtta 1026

                                                                        
Query: 297  aacttctcgaccaactcgttcattgtgcttgaacagttcgtgaacattgcaaggtaagtc 356
            ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1025 aacttctcgaccagctcattcattgtgcttgaacagttagtgaacatagcaaggtaagtc 966

                                                                        
Query: 357  atgaggagggtgtcgttgtattccgttaagaaatcatcttggaatttctccgattccata 416
            |||||||||||||| ||||||||| ||| ||| |||||||||||||| || || ||||| 
Sbjct: 965  atgaggagggtgtcattgtattccattaggaagtcatcttggaatttttctgactccatt 906

                                                                        
Query: 417  gctggcagtcttcttacgaggcttgagacttgcctaagaagtgaattatccagtggaata 476
            ||||| || |||||||| |||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 905  gctggtagccttcttactaggcttgagacttgcctaagcagcgaattgtccagtggcata 846

                                                                        
Query: 477  tcacccttttgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatc 536
            ||||| || ||||||| | |||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 845  tcacctttctgcatggaaacaagatattgatggataacacggaccctgctattgagcatc 786

                                                                        
Query: 537  ttgatggcactgtgtattcctgtaagatgagcagccaattgagttgctgcagagccaccg 596
            ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 785  ttgatggcactgtgtattcctgtcagatgagcagccaattgagtcgccgcagagccacca 726

                                                                        
Query: 597  tcagatggttttagatgggcaacatgatctacagatatcctctctgcttctacagtctca 656
            ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 725  tcagatggtttgagatgggcaacatgatcaacagatatcctctctgcctctacagtctca 666

             
Query: 657  a 657
            |
Sbjct: 665  a 665

---

>dbj|AK058215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D12, full
            insert sequence
          Length = 1408

 Score =  517 bits (261), Expect = e-143
 Identities = 381/421 (90%)
 Strand = Plus / Minus

                                                                        
Query: 237  atctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgtta 296
            |||||||||||||||||||||||||||||||||||||  || ||||| || || | ||||
Sbjct: 1085 atctacatgaaagcacctcggcctcctctcctggcagtcgacctctcgtatgtcgcgtta 1026

                                                                        
Query: 297  aacttctcgaccaactcgttcattgtgcttgaacagttcgtgaacattgcaaggtaagtc 356
            ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1025 aacttctcgaccagctcattcattgtgcttgaacagttagtgaacatagcaaggtaagtc 966

                                                                        
Query: 357  atgaggagggtgtcgttgtattccgttaagaaatcatcttggaatttctccgattccata 416
            |||||||||||||| ||||||||| ||| ||| |||||||||||||| || || ||||| 
Sbjct: 965  atgaggagggtgtcattgtattccattaggaagtcatcttggaatttttctgactccatt 906

                                                                        
Query: 417  gctggcagtcttcttacgaggcttgagacttgcctaagaagtgaattatccagtggaata 476
            ||||| || |||||||| |||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 905  gctggtagccttcttactaggcttgagacttgcctaagcagcgaattgtccagtggcata 846

                                                                        
Query: 477  tcacccttttgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatc 536
            ||||| || ||||||| | |||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 845  tcacctttctgcatggaaacaagatattgatggataacacggaccctgctattgagcatc 786

                                                                        
Query: 537  ttgatggcactgtgtattcctgtaagatgagcagccaattgagttgctgcagagccaccg 596
            ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 785  ttgatggcactgtgtattcctgtcagatgagcagccaattgagtcgccgcagagccacca 726

                                                                        
Query: 597  tcagatggttttagatgggcaacatgatctacagatatcctctctgcttctacagtctca 656
            ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 725  tcagatggtttgagatgggcaacatgatcaacagatatcctctctgcctctacagtctca 666

             
Query: 657  a 657
            |
Sbjct: 665  a 665

---

>emb|AM234671.1| Oryza sativa mRNA for COP9 signalosome subunit 6 (csn6 gene)
          Length = 1408

 Score =  517 bits (261), Expect = e-143
 Identities = 381/421 (90%)
 Strand = Plus / Minus

                                                                        
Query: 237  atctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgtta 296
            |||||||||||||||||||||||||||||||||||||  || ||||| || || | ||||
Sbjct: 1085 atctacatgaaagcacctcggcctcctctcctggcagtcgacctctcgtatgtcgcgtta 1026

                                                                        
Query: 297  aacttctcgaccaactcgttcattgtgcttgaacagttcgtgaacattgcaaggtaagtc 356
            ||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1025 aacttctcgaccagctcattcattgtgcttgaacagttagtgaacatagcaaggtaagtc 966

                                                                        
Query: 357  atgaggagggtgtcgttgtattccgttaagaaatcatcttggaatttctccgattccata 416
            |||||||||||||| ||||||||| ||| ||| |||||||||||||| || || ||||| 
Sbjct: 965  atgaggagggtgtcattgtattccattaggaagtcatcttggaatttttctgactccatt 906

                                                                        
Query: 417  gctggcagtcttcttacgaggcttgagacttgcctaagaagtgaattatccagtggaata 476
            ||||| || |||||||| |||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 905  gctggtagccttcttactaggcttgagacttgcctaagcagcgaattgtccagtggcata 846

                                                                        
Query: 477  tcacccttttgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatc 536
            ||||| || ||||||| | |||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 845  tcacctttctgcatggaaacaagatattgatggataacacggaccctgctattgagcatc 786

                                                                        
Query: 537  ttgatggcactgtgtattcctgtaagatgagcagccaattgagttgctgcagagccaccg 596
            ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 785  ttgatggcactgtgtattcctgtcagatgagcagccaattgagtcgccgcagagccacca 726

                                                                        
Query: 597  tcagatggttttagatgggcaacatgatctacagatatcctctctgcttctacagtctca 656
            ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 725  tcagatggtttgagatgggcaacatgatcaacagatatcctctctgcctctacagtctca 666

             
Query: 657  a 657
            |
Sbjct: 665  a 665

---

>gb|AY104920.1| Zea mays PCO100740 mRNA sequence
          Length = 1562

 Score =  482 bits (243), Expect = e-133
 Identities = 375/419 (89%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgttaaa 298
            |||||||||||||||||||||||||||||||| ||  | |||||||||  | ||||| | 
Sbjct: 1150 ctacatgaaagcacctcggcctcctctcctggtagtcggtctctcatagcttgtgttgat 1091

                                                                        
Query: 299  cttctcgaccaactcgttcattgtgcttgaacagttcgtgaacattgcaaggtaagtcat 358
             |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1090 tttctcgaccaactcattcattgtgcttgaacagttagtgaacattgccaggtaagtcat 1031

                                                                        
Query: 359  gaggagggtgtcgttgtattccgttaagaaatcatcttggaatttctccgattccatagc 418
            |||||| ||||||||||||||| |||| || ||||||||||||||||  |||||| ||||
Sbjct: 1030 gaggagagtgtcgttgtattccattaaaaagtcatcttggaatttctgtgattccgtagc 971

                                                                        
Query: 419  tggcagtcttcttacgaggcttgagacttgcctaagaagtgaattatccagtggaatatc 478
             || || |||||||| |||||||||||||||||||| || ||||| |||| |||||| ||
Sbjct: 970  cggtagccttcttacaaggcttgagacttgcctaagcagcgaattgtccattggaatgtc 911

                                                                        
Query: 479  acccttttgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatctt 538
            ||| |||||||||||| |||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 910  acctttttgcatggcaacaagatactgatggataacacggaccctgctattgagcatctt 851

                                                                        
Query: 539  gatggcactgtgtattcctgtaagatgagcagccaattgagttgctgcagagccaccgtc 598
            |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 850  gatggcactgtgtattcctgtaagatgagcagccaactgagttgctgctgagccaccatc 791

                                                                       
Query: 599  agatggttttagatgggcaacatgatctacagatatcctctctgcttctacagtctcaa 657
            ||| ||||| |||||||||||||| || |||||||||||||| || |||||||||||||
Sbjct: 790  agaaggtttgagatgggcaacatggtccacagatatcctctcagcctctacagtctcaa 732

---

>gb|BT017731.1| Zea mays clone EL01N0448B12.c mRNA sequence
          Length = 1383

 Score =  474 bits (239), Expect = e-130
 Identities = 374/419 (89%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgttaaa 298
            |||||||||||||||||| ||||||||||||  ||  | |||||||||  | ||||| | 
Sbjct: 1070 ctacatgaaagcacctcgacctcctctcctgctagtcgttctctcatagctcgtgtttat 1011

                                                                        
Query: 299  cttctcgaccaactcgttcattgtgcttgaacagttcgtgaacattgcaaggtaagtcat 358
            ||||||||||||||||||||||||||||||||| || |||| |||||||||||| |||||
Sbjct: 1010 cttctcgaccaactcgttcattgtgcttgaacatttagtgaccattgcaaggtaggtcat 951

                                                                        
Query: 359  gaggagggtgtcgttgtattccgttaagaaatcatcttggaatttctccgattccatagc 418
            |||||| ||||||||||||||| ||||||| || |||||||||||||  || ||||||||
Sbjct: 950  gaggagagtgtcgttgtattccattaagaagtcgtcttggaatttctgtgactccatagc 891

                                                                        
Query: 419  tggcagtcttcttacgaggcttgagacttgcctaagaagtgaattatccagtggaatatc 478
            ||| || ||||||||||||||||||||||||||||| || |||||||| | |||||| ||
Sbjct: 890  tggtagccttcttacgaggcttgagacttgcctaagcagcgaattatctaatggaatgtc 831

                                                                        
Query: 479  acccttttgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatctt 538
            ||| |||||||||||| | || || || ||||||||||| ||||||||||||||||||||
Sbjct: 830  acctttttgcatggcaacgagatactgatggataacacggaccctgctattgagcatctt 771

                                                                        
Query: 539  gatggcactgtgtattcctgtaagatgagcagccaattgagttgctgcagagccaccgtc 598
            |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 770  gatggcactgtgtattcctgtaagatgagcagccaactgagttgctgctgagccaccatc 711

                                                                       
Query: 599  agatggttttagatgggcaacatgatctacagatatcctctctgcttctacagtctcaa 657
            ||| ||||| |||||||||||||| || |||||||||||||| || |||||||||||||
Sbjct: 710  agaaggtttgagatgggcaacatggtccacagatatcctctcagcctctacagtctcaa 652



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gcacctcggcctcctctcctg 269
            |||||||||||||||||||||
Sbjct: 1202 gcacctcggcctcctctcctg 1182

---

>ref|NM_125011.2| Arabidopsis thaliana CSN6A AT5G56280 (CSN6A) mRNA, complete cds
          Length = 1216

 Score =  133 bits (67), Expect = 8e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 703 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggtt 644

                                                                  
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 643 gctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 589

---

>gb|AF395063.1|AF395063 Arabidopsis thaliana CSN complex subunit 6A (CSN6A) mRNA, complete
           cds
          Length = 962

 Score =  133 bits (67), Expect = 8e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 674 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggtt 615

                                                                  
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 614 gctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 560

---

>gb|AY048692.1| Arabidopsis thaliana COP9 complex subunit 6 mRNA, complete cds
          Length = 1250

 Score =  133 bits (67), Expect = 8e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 715 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggtt 656

                                                                  
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 655 gctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 601

---

>emb|BX831835.1|CNS0A107 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZC09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1119

 Score =  133 bits (67), Expect = 8e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 705 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggtt 646

                                                                  
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 645 gctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 591

---

>emb|BX832027.1|CNS09YTR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH47ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1041

 Score =  133 bits (67), Expect = 8e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 544 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggtt 485

                                                                  
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 484 gctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 430

---

>gb|BT004034.1| Arabidopsis thaliana clone RAFL15-43-C20 (R20900) putative COP9
           complex subunit 6 CSN6 (At5g56280) mRNA, partial cds
          Length = 906

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                       
Query: 524 gctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagttgc 583
           |||||| ||||||||||||||||| ||||| || ||||||||||||||||| || |||||
Sbjct: 390 gctattaagcatcttgatggcactatgtataccagtaagatgagcagccaactgggttgc 331

                                                                
Query: 584 tgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
           ||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 330 tgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 278

---

>ref|NM_118776.2| Arabidopsis thaliana CSN6B AT4G26430 (CSN6B) mRNA, complete cds
          Length = 1467

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 911 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 852

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 851 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 792

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 791 gcttcaactgtctcaa 776

---

>gb|AY080638.1| Arabidopsis thaliana unknown protein (At4g26430) mRNA, partial cds
          Length = 965

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 392 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 333

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 332 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 273

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 272 gcttcaactgtctcaa 257

---

>gb|AF395064.1|AF395064 Arabidopsis thaliana CSN complex subunit 6B (CSN6B) mRNA, complete
           cds
          Length = 966

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 674 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 615

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 614 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 555

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 554 gcttcaactgtctcaa 539

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                            
Query: 486      tgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatcttgatggca 545
                ||||||| | |||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 24675068 tgcatggaaacaagatattgatggataacacggaccctgctattgagcatcttgatggca 24675127

                                            
Query: 546      ctgtgtattcctgtaagatgagcagcca 573
                |||||||||||||| |||||||||||||
Sbjct: 24675128 ctgtgtattcctgtcagatgagcagcca 24675155



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                            
Query: 574      attgagttgctgcagagccaccgtcagatggttttagatgggcaacatgatctacagata 633
                ||||||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 24675259 attgagtcgccgcagagccaccatcagatggtttgagatgggcaacatgatcaacagata 24675318

                                     
Query: 634      tcctctctgcttctacagtct 654
                |||||||||| ||||||||||
Sbjct: 24675319 tcctctctgcctctacagtct 24675339



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 237      atctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgtta 296
                |||||||||||||||||||||||||||||||||||||  || ||||| || || | ||||
Sbjct: 24674317 atctacatgaaagcacctcggcctcctctcctggcagtcgacctctcgtatgtcgcgtta 24674376

                                             
Query: 297      aacttctcgaccaactcgttcattgtgct 325
                ||||||||||||| ||| |||||||||||
Sbjct: 24674377 aacttctcgaccagctcattcattgtgct 24674405



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                            
Query: 390      tcatcttggaatttctccgattccatagctggcagtcttcttacgaggcttgagacttgc 449
                |||||||||||||| || || ||||| ||||| || |||||||| |||||||||||||||
Sbjct: 24674841 tcatcttggaatttttctgactccattgctggtagccttcttactaggcttgagacttgc 24674900

                                                
Query: 450      ctaagaagtgaattatccagtggaatatcacc 481
                ||||| || ||||| |||||||| ||||||||
Sbjct: 24674901 ctaagcagcgaattgtccagtggcatatcacc 24674932



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                         
Query: 324      cttgaacagttcgtgaacattgcaaggtaagtcatgaggagggtgtcgttgtattcc 380
                ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 24674691 cttgaacagttagtgaacatagcaaggtaagtcatgaggagggtgtcattgtattcc 24674747

---

>emb|BX826563.1|CNS0A38W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1186

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 709 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 650

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 649 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 590

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 589 gcttcaactgtctcaa 574

---

>gb|AY087556.1| Arabidopsis thaliana clone 36616 mRNA, complete sequence
          Length = 1194

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 681 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 622

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 621 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 562

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 561 gcttcaactgtctcaa 546

---

>gb|BT002345.1| Arabidopsis thaliana clone C104953 unknown protein (At4g26430)
           mRNA, complete cds
          Length = 985

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 674 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccaactgagtc 615

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 614 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 555

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 554 gcttcaactgtctcaa 539

---

>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                         
Query: 486   tgcatggcaccaaggtattgctggataacacgaaccctgctattgagcatcttgatggca 545
             ||||||| | |||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 47372 tgcatggaaacaagatattgatggataacacggaccctgctattgagcatcttgatggca 47431

                                         
Query: 546   ctgtgtattcctgtaagatgagcagcca 573
             |||||||||||||| |||||||||||||
Sbjct: 47432 ctgtgtattcctgtcagatgagcagcca 47459



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                         
Query: 574   attgagttgctgcagagccaccgtcagatggttttagatgggcaacatgatctacagata 633
             ||||||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 47563 attgagtcgccgcagagccaccatcagatggtttgagatgggcaacatgatcaacagata 47622

                                  
Query: 634   tcctctctgcttctacagtct 654
             |||||||||| ||||||||||
Sbjct: 47623 tcctctctgcctctacagtct 47643



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 237   atctacatgaaagcacctcggcctcctctcctggcaggggatctctcatacgtggtgtta 296
             |||||||||||||||||||||||||||||||||||||  || ||||| || || | ||||
Sbjct: 46621 atctacatgaaagcacctcggcctcctctcctggcagtcgacctctcgtatgtcgcgtta 46680

                                          
Query: 297   aacttctcgaccaactcgttcattgtgct 325
             ||||||||||||| ||| |||||||||||
Sbjct: 46681 aacttctcgaccagctcattcattgtgct 46709



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                         
Query: 390   tcatcttggaatttctccgattccatagctggcagtcttcttacgaggcttgagacttgc 449
             |||||||||||||| || || ||||| ||||| || |||||||| |||||||||||||||
Sbjct: 47145 tcatcttggaatttttctgactccattgctggtagccttcttactaggcttgagacttgc 47204

                                             
Query: 450   ctaagaagtgaattatccagtggaatatcacc 481
             ||||| || ||||| |||||||| ||||||||
Sbjct: 47205 ctaagcagcgaattgtccagtggcatatcacc 47236



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                      
Query: 324   cttgaacagttcgtgaacattgcaaggtaagtcatgaggagggtgtcgttgtattcc 380
             ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 46995 cttgaacagttagtgaacatagcaaggtaagtcatgaggagggtgtcattgtattcc 47051

---

>gb|AF434762.1|AF434762 Arabidopsis thaliana COP9 signalosome subunit 6 (CSN6B) mRNA,
           complete cds
          Length = 1208

 Score =  119 bits (60), Expect = 1e-23
 Identities = 117/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 522 ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagccaattgagtt 581
           |||||||| ||||||||||||||||| |||||||| ||||||||||||||||  ||||| 
Sbjct: 911 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagccacctgagtc 852

                                                                       
Query: 582 gctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcctctct 641
           || || ||||| || |||||||| || ||||| ||||||||||| |||||||| || || 
Sbjct: 851 gcagctgagcctccatcagatggcttaagatgtgcaacatgatcaacagatattctttca 792

                           
Query: 642 gcttctacagtctcaa 657
           ||||| || |||||||
Sbjct: 791 gcttcaactgtctcaa 776

---

>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 522   ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagcca 573
             |||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 53522 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagcca 53471



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 588   gagccaccgtcagatggttttagatgggcaacatgatctacagatat 634
             ||||| || |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 53365 gagcctccatcagatggcttaagatgtgcaacatgatcaacagatat 53319

---

>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                 
Query: 522   ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagcca 573
             |||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 52886 ctgctattaagcatcttgatggcactatgtattccagtaagatgagcagcca 52937



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 588   gagccaccgtcagatggttttagatgggcaacatgatctacagatat 634
             ||||| || |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 53043 gagcctccatcagatggcttaagatgtgcaacatgatcaacagatat 53089

---

>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23
          Length = 9670

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                
Query: 522  ctgctattgagcatcttgatggcactgtgtattcctgtaagatgagcagcca 573
            |||||||| ||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 7072 ctgctattaagcatcttgatggcactatgtataccagtaagatgagcagcca 7123



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                      
Query: 579  gttgctgcagagccaccgtcagatggttttagatgggcaacatgatctacagatatcc 636
            |||||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 7210 gttgctgctgagcctccgtcagatggtttaagatgtgcaacatgatcaactgatatcc 7267

---

>dbj|AK103987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H11, full
           insert sequence
          Length = 1773

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 624 tctacagatatcctctctgcttctacagtctca 656
           |||| ||||||||||||||| ||||||||||||
Sbjct: 727 tctaaagatatcctctctgcctctacagtctca 695

---

>dbj|AK102645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100G22, full
           insert sequence
          Length = 1644

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 624 tctacagatatcctctctgcttctacagtctca 656
           |||| ||||||||||||||| ||||||||||||
Sbjct: 731 tctaaagatatcctctctgcctctacagtctca 699

---

>dbj|AK072851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135N05, full
           insert sequence
          Length = 1782

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 624 tctacagatatcctctctgcttctacagtctca 656
           |||| ||||||||||||||| ||||||||||||
Sbjct: 770 tctaaagatatcctctctgcctctacagtctca 738

---

>dbj|AK068389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146P10, full
            insert sequence
          Length = 2207

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 624  tctacagatatcctctctgcttctacagtctca 656
            |||| ||||||||||||||| ||||||||||||
Sbjct: 1161 tctaaagatatcctctctgcctctacagtctca 1129

---

>emb|AL590403.13| Human DNA sequence from clone RP13-459B11 on chromosome 6 Contains the
             GRM4 gene for glutamate receptor (metabotropic 4) and a
             CpG island, complete sequence
          Length = 118771

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 255   cggcctcctctcctggcagggga 277
             |||||||||||||||||||||||
Sbjct: 58726 cggcctcctctcctggcagggga 58704



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   gcctcctctcctggcagggga 277
             |||||||||||||||||||||
Sbjct: 58659 gcctcctctcctggcagggga 58639

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 624      tctacagatatcctctctgcttctacagtct 654
                |||| ||||||||||||||| ||||||||||
Sbjct: 26586617 tctaaagatatcctctctgcctctacagtct 26586587



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 619      catgatctacagatatcctctctgcttctaca 650
                |||| |||| |||||||||||||||| |||||
Sbjct: 26635758 catggtctaaagatatcctctctgctcctaca 26635727

---

>dbj|AK106674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A05, full
           insert sequence
          Length = 1645

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 619 catgatctacagatatcctctctgcttctacagtctcaa 657
           |||| |||| |||||||||||||||| ||||| ||||||
Sbjct: 636 catggtctaaagatatcctctctgctcctacaatctcaa 598

---

>emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in linkage group 3,
             complete sequence
          Length = 138425

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 498   aggtattgctggataacacgaac 520
             |||||||||||||||||||||||
Sbjct: 77771 aggtattgctggataacacgaac 77749

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 624      tctacagatatcctctctgcttctacagtct 654
                |||| ||||||||||||||| ||||||||||
Sbjct: 26514786 tctaaagatatcctctctgcctctacagtct 26514756



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 619      catgatctacagatatcctctctgcttctaca 650
                |||| |||| |||||||||||||||| |||||
Sbjct: 26563927 catggtctaaagatatcctctctgctcctaca 26563896

---

>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 85710

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 624   tctacagatatcctctctgcttctacagtct 654
             |||| ||||||||||||||| ||||||||||
Sbjct: 56622 tctaaagatatcctctctgcctctacagtct 56592

---

>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 624  tctacagatatcctctctgcttctacagtct 654
            |||| ||||||||||||||| ||||||||||
Sbjct: 5487 tctaaagatatcctctctgcctctacagtct 5457



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 619   catgatctacagatatcctctctgcttctaca 650
             |||| |||| |||||||||||||||| |||||
Sbjct: 54628 catggtctaaagatatcctctctgctcctaca 54597

---

>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains
             part of a novel gene (DKFZp761L0424) (KIAA1217) and three
             novel genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 637   tctctgcttctacagtctcaa 657
             |||||||||||||||||||||
Sbjct: 18956 tctctgcttctacagtctcaa 18936

---

>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170799

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    caaaacctcagctgcagcagg 223
              |||||||||||||||||||||
Sbjct: 151927 caaaacctcagctgcagcagg 151947

---

>gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, complete sequence
          Length = 147202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 637   tctctgcttctacagtctcaa 657
             |||||||||||||||||||||
Sbjct: 44433 tctctgcttctacagtctcaa 44453

---

>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence
          Length = 230898

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     gagtcattaatccaacccag 87
              ||||||||||||||||||||
Sbjct: 104400 gagtcattaatccaacccag 104419

---

>ref|XM_519247.1| PREDICTED: Pan troglodytes similar to COP9 signalosome subunit 6;
           H_NH0506M12.12; COP9 subunit 6; MOV34 homolog, 34 kD
           (LOC463587), mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 531 agcatcttgatggcactgtg 550
           ||||||||||||||||||||
Sbjct: 644 agcatcttgatggcactgtg 625

---

>gb|AC167548.1| Mus musculus chromosome 18, clone wi1-1164C4, complete sequence
          Length = 41219

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   accgatctacatgaaagcac 252
             ||||||||||||||||||||
Sbjct: 27408 accgatctacatgaaagcac 27427

---

>gb|U12964.1| Caenorhabditis elegans cosmid F26F4, complete sequence
          Length = 32365

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ggataagaagattgaaaagt 110
             ||||||||||||||||||||
Sbjct: 13253 ggataagaagattgaaaagt 13234

---

>ref|XM_414316.1| PREDICTED: Gallus gallus LOC415973 (LOC415973), mRNA
          Length = 3578

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 85   cagagaggataagaagattgaaaa 108
            ||||||| ||||||||||||||||
Sbjct: 3507 cagagagcataagaagattgaaaa 3530

---

>gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosome 3, complete sequence
          Length = 161119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   atgggaactattttcaaaatctca 185
             ||||||||||||||||| ||||||
Sbjct: 18163 atgggaactattttcaagatctca 18140

---

>gb|AC125518.3| Mus musculus BAC clone RP24-267E6 from chromosome 1, complete sequence
          Length = 174190

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   caattgagttgctgcagagc 591
             ||||||||||||||||||||
Sbjct: 55922 caattgagttgctgcagagc 55941

---

>ref|XM_720855.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05483)
           partial mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 tgctattgagcatcttgatg 542
           ||||||||||||||||||||
Sbjct: 108 tgctattgagcatcttgatg 127

---

>gb|AC112655.4| Homo sapiens X BAC RP11-286G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114148

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   atgggaactattttcaaaat 181
             ||||||||||||||||||||
Sbjct: 55914 atgggaactattttcaaaat 55895

---

>emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 in linkage group 18,
             complete sequence
          Length = 116953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   aagaaatcatcttggaattt 403
             ||||||||||||||||||||
Sbjct: 40824 aagaaatcatcttggaattt 40843

---

>emb|BX537322.5| Zebrafish DNA sequence from clone CH211-80L5 in linkage group 1,
             complete sequence
          Length = 65076

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   gtaagtcatgaggagggtgt 369
             ||||||||||||||||||||
Sbjct: 49720 gtaagtcatgaggagggtgt 49701

---

>emb|CR524392.1| Gallus gallus finished cDNA, clone ChEST275g2
          Length = 1648

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  cagagaggataagaagattgaaaa 108
           ||||||| ||||||||||||||||
Sbjct: 700 cagagagcataagaagattgaaaa 723

---

>gb|AC146015.4| Pan troglodytes BAC clone RP43-129D8 from chromosome 7, complete sequence
          Length = 151463

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 531    agcatcttgatggcactgtg 550
              ||||||||||||||||||||
Sbjct: 108264 agcatcttgatggcactgtg 108245

---

>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence
          Length = 204323

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   atgggaactattttcaaaatctca 185
             ||||||||||||||||| ||||||
Sbjct: 47936 atgggaactattttcaagatctca 47959

---

>ref|NM_065625.2| Caenorhabditis elegans NHL (ring finger b-box coiled coil) domain
           containing family member (nhl-2) (nhl-2) mRNA, complete
           cds
          Length = 3735

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  ggataagaagattgaaaagt 110
           ||||||||||||||||||||
Sbjct: 87  ggataagaagattgaaaagt 106

---

>emb|BX510304.12| Mouse DNA sequence from clone RP23-128I6 on chromosome 2, complete
             sequence
          Length = 160779

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   tgctattgagcatcttgatg 542
             ||||||||||||||||||||
Sbjct: 21241 tgctattgagcatcttgatg 21260

---

>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence
          Length = 175263

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    agaaatcatcttggaatttc 404
              ||||||||||||||||||||
Sbjct: 129995 agaaatcatcttggaatttc 129976

---

>gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, complete sequence
          Length = 169754

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    agaaatcatcttggaatttc 404
              ||||||||||||||||||||
Sbjct: 122461 agaaatcatcttggaatttc 122442

---

>gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, complete sequence
          Length = 152802

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   agaaatcatcttggaatttc 404
             ||||||||||||||||||||
Sbjct: 23722 agaaatcatcttggaatttc 23703

---

>emb|AL929093.6| Zebrafish DNA sequence from clone CH211-149P10, complete sequence
          Length = 177248

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    gtaagtcatgaggagggtgt 369
              ||||||||||||||||||||
Sbjct: 162688 gtaagtcatgaggagggtgt 162707

---

>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence
          Length = 138251

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    agaaatcatcttggaatttc 404
              ||||||||||||||||||||
Sbjct: 137054 agaaatcatcttggaatttc 137073

---

>emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 in linkage group 18,
              complete sequence
          Length = 265632

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    aagaaatcatcttggaattt 403
              ||||||||||||||||||||
Sbjct: 125459 aagaaatcatcttggaattt 125478

---

>emb|AL929190.3| Zebrafish DNA sequence from clone DKEY-77N11, complete sequence
          Length = 150892

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    gtaagtcatgaggagggtgt 369
              ||||||||||||||||||||
Sbjct: 111850 gtaagtcatgaggagggtgt 111831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,518,106
Number of Sequences: 3902068
Number of extensions: 5518106
Number of successful extensions: 130551
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130351
Number of HSP's gapped (non-prelim): 199
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---