ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23a07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 ggcggcggcggcgtcgtgttc 252 ||||||||||||||||||||| Sbjct: 88139 ggcggcggcggcgtcgtgttc 88119
>ref|XM_957307.1| Neurospora crassa OR74A hypothetical protein (NCU06366.1) partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggacagaatttggccaagaag 222 ||||||||||||||||||||| Sbjct: 451 ggacagaatttggccaagaag 471
>ref|XM_326220.1| Neurospora crassa OR74A hypothetical protein (NCU06366.1) partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggacagaatttggccaagaag 222 ||||||||||||||||||||| Sbjct: 451 ggacagaatttggccaagaag 471
>gb|AC008953.7| Homo sapiens chromosome 5 clone CTD-2339M3, complete sequence Length = 95401 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 cggcggttctttctccttggg 353 ||||||||||||||||||||| Sbjct: 87010 cggcggttctttctccttggg 86990
>gb|AC035140.7| Homo sapiens chromosome 5 clone CTD-2631K10, complete sequence Length = 61965 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 cggcggttctttctccttggg 353 ||||||||||||||||||||| Sbjct: 12843 cggcggttctttctccttggg 12823
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgttc 252 ||||||||||||||||||||| Sbjct: 2534265 ggcggcggcggcgtcgtgttc 2534285
>dbj|AK109939.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A12, full insert sequence Length = 1174 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgttc 252 ||||||||||||||||||||| Sbjct: 700 ggcggcggcggcgtcgtgttc 720
>dbj|AK106277.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-H06, full insert sequence Length = 2330 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgttc 252 ||||||||||||||||||||| Sbjct: 821 ggcggcggcggcgtcgtgttc 841
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgttc 252 ||||||||||||||||||||| Sbjct: 2543296 ggcggcggcggcgtcgtgttc 2543316
>gb|AY732106.1| Hepatitis C virus isolate 01CHNYNHCV3 from China polyprotein gene, partial cds Length = 527 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 192 caccacggctgggcttgttggtct 215
>gb|AY732103.1| Hepatitis C virus isolate 00CHNYN18M from China polyprotein gene, partial cds Length = 535 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 201 caccacggctgggcttgttggtct 224
>ref|XM_465884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgtt 251 |||||||||||||||||||| Sbjct: 166 ggcggcggcggcgtcgtgtt 185
>gb|AY725971.1| Hepatitis C virus clone 03 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725970.1| Hepatitis C virus clone 28 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725966.1| Hepatitis C virus clone 04 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725965.1| Hepatitis C virus clone 10 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725964.1| Hepatitis C virus clone 12 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725963.1| Hepatitis C virus clone 16 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725962.1| Hepatitis C virus clone 26 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725961.1| Hepatitis C virus clone 01 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725960.1| Hepatitis C virus clone 14 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>gb|AY725959.1| Hepatitis C virus clone 32 polyprotein gene, partial cds Length = 437 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 92 caccacggctgggcttgttggtct 115
>ref|XM_367331.1| Magnaporthe grisea 70-15 hypothetical protein (MG07256.4) partial mRNA Length = 3255 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggcggcggcggcgtcgtgtt 251 |||||||||||||||||||| Sbjct: 371 ggcggcggcggcgtcgtgtt 352
>ref|XM_590721.2| PREDICTED: Bos taurus similar to Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H antigen) (LOC513091), mRNA Length = 7202 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gcaggctcagggagggcctg 332 |||||||||||||||||||| Sbjct: 6025 gcaggctcagggagggcctg 6006
>gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, complete sequence Length = 212015 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 agtaatcaccaggaagattg 300 |||||||||||||||||||| Sbjct: 2697 agtaatcaccaggaagattg 2678
>gb|M62381.1|HPCST77 Hepatitis C virus polyprotein gene, partial cds Length = 2610 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1458 caccacggctgggcttgttggtct 1481
>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence Length = 194636 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gaggcatggacagaatttgg 214 |||||||||||||||||||| Sbjct: 81798 gaggcatggacagaatttgg 81817
>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence Length = 136520 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcggcggcggcgtcgtgttc 252 |||||||||||||||||||| Sbjct: 61570 gcggcggcggcgtcgtgttc 61589
>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence Length = 236838 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 agtaatcaccaggaagattg 300 |||||||||||||||||||| Sbjct: 150134 agtaatcaccaggaagattg 150115
>emb|AL359079.15| Human DNA sequence from clone RP13-360B22 on chromosome Xq22.2-23 Contains the 3' end of the AMMECR1 gene for Alport syndrome (mental retardation, midface hypoplasia and elliptocytosis, chromosomal region gene 1) (FLJ341111) and the 3' end of a novel gene (FLJ22679, FLJ36808), complete sequence Length = 89267 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggttctttctccttgggctc 356 |||||||||||||||||||| Sbjct: 62016 ggttctttctccttgggctc 61997
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgtt 251 |||||||||||||||||||| Sbjct: 18098208 ggcggcggcggcgtcgtgtt 18098227
>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gcggcggcggcgtcgtgttc 252 |||||||||||||||||||| Sbjct: 29091 gcggcggcggcgtcgtgttc 29072
>ref|NM_204949.1| Gallus gallus transcription factor cash4 (LOC395791), mRNA Length = 504 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gcggcggcggcgtcgtgttc 252 |||||||||||||||||||| Sbjct: 326 gcggcggcggcgtcgtgttc 307
>gb|AF245893.1|AF245893 Hepatitis C virus isolate P9 clone C69 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245892.1|AF245892 Hepatitis C virus isolate P9 clone C65 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245890.1|AF245890 Hepatitis C virus isolate P9 clone C62 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245889.1|AF245889 Hepatitis C virus isolate P9 clone C119 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245888.1|AF245888 Hepatitis C virus isolate P9 clone C118 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245887.1|AF245887 Hepatitis C virus isolate P9 clone C116 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245885.1|AF245885 Hepatitis C virus isolate P9 clone C51 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245884.1|AF245884 Hepatitis C virus isolate P9 clone C23 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245883.1|AF245883 Hepatitis C virus isolate P9 clone B347 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245881.1|AF245881 Hepatitis C virus isolate P9 clone B345 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245879.1|AF245879 Hepatitis C virus isolate P9 clone B343 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245878.1|AF245878 Hepatitis C virus isolate P9 clone B337 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245876.1|AF245876 Hepatitis C virus isolate P9 clone B256 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245875.1|AF245875 Hepatitis C virus isolate P9 clone B225 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245874.1|AF245874 Hepatitis C virus isolate P9 clone B111 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245873.1|AF245873 Hepatitis C virus isolate P9 clone A60 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245872.1|AF245872 Hepatitis C virus isolate P9 clone A59 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245870.1|AF245870 Hepatitis C virus isolate P9 clone A53 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245869.1|AF245869 Hepatitis C virus isolate P9 clone A52 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245868.1|AF245868 Hepatitis C virus isolate P9 clone A49 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245867.1|AF245867 Hepatitis C virus isolate P9 clone A107 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245865.1|AF245865 Hepatitis C virus isolate P9 clone A103 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF245841.1|AF245841 Hepatitis C virus isolate P9 clone A105 polyprotein precursor, E1/E2 region, gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 231 caccacggctgggcttgttggtct 254
>gb|AF230452.1|AF230452 Hepatitis C virus isolate X361A-ww polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230451.1|AF230451 Hepatitis C virus isolate X361A-vv polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230450.1|AF230450 Hepatitis C virus isolate X361A-uu polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230448.1|AF230448 Hepatitis C virus isolate X361A-ff polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230447.1|AF230447 Hepatitis C virus isolate X361A-a polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230446.1|AF230446 Hepatitis C virus isolate X187A-e polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230445.1|AF230445 Hepatitis C virus isolate X187A-ss polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230444.1|AF230444 Hepatitis C virus isolate X187A-nn polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230443.1|AF230443 Hepatitis C virus isolate X187A-mm polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230442.1|AF230442 Hepatitis C virus isolate X187A-a polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230441.1|AF230441 Hepatitis C virus isolate X187HC4_1 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230440.1|AF230440 Hepatitis C virus isolate X187HC3_11 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230439.1|AF230439 Hepatitis C virus isolate X187HC6_15 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230438.1|AF230438 Hepatitis C virus isolate X186A-qq polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230437.1|AF230437 Hepatitis C virus isolate X186A-b polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230436.1|AF230436 Hepatitis C virus isolate X186A-ll polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230435.1|AF230435 Hepatitis C virus isolate X186A-mm polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230434.1|AF230434 Hepatitis C virus isolate X186A-a polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230433.1|AF230433 Hepatitis C virus isolate X186HC12_4 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230432.1|AF230432 Hepatitis C virus isolate X186HC26_2 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230431.1|AF230431 Hepatitis C virus isolate X186HC14_21 polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230430.1|AF230430 Hepatitis C virus isolate X268A-gg polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230429.1|AF230429 Hepatitis C virus isolate X268A-ff polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230428.1|AF230428 Hepatitis C virus isolate X268A-b polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230427.1|AF230427 Hepatitis C virus isolate X268A-a polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230426.1|AF230426 Hepatitis C virus isolate X174C-ee polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230423.1|AF230423 Hepatitis C virus isolate X174C-q polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230422.1|AF230422 Hepatitis C virus isolate X174C-p polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230421.1|AF230421 Hepatitis C virus isolate X174A-o polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230420.1|AF230420 Hepatitis C virus isolate X174A-m polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230419.1|AF230419 Hepatitis C virus isolate X174A-j polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230418.1|AF230418 Hepatitis C virus isolate X007A-f polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230417.1|AF230417 Hepatitis C virus isolate X007A-b polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>gb|AF230416.1|AF230416 Hepatitis C virus isolate X007A-a polyprotein gene, partial cds Length = 390 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 66 caccacggctgggcttgttggtct 89
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggcggcggcggcgtcgtgtt 251 |||||||||||||||||||| Sbjct: 21609 ggcggcggcggcgtcgtgtt 21628
>dbj|AB038172.1| Xenopus laevis mRNA for caspase-9, complete cds Length = 1388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggacccgattccgcctcaaa 123 |||||||||||||||||||| Sbjct: 49 ggacccgattccgcctcaaa 30
>gb|U89138.1|GGU89138 Gallus gallus transcription factor cash4 mRNA, complete cds Length = 504 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gcggcggcggcgtcgtgttc 252 |||||||||||||||||||| Sbjct: 326 gcggcggcggcgtcgtgttc 307
>gb|AF011753.1|AF011753 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds Length = 9599 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1523 caccacggctgggcttgttggtct 1546
>gb|AF011752.1|AF011752 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds Length = 9599 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1523 caccacggctgggcttgttggtct 1546
>gb|AF011751.1|AF011751 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds Length = 9599 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1523 caccacggctgggcttgttggtct 1546
>gb|AF009606.1|AF009606 Hepatitis C virus polyprotein gene, complete cds Length = 9646 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1523 caccacggctgggcttgttggtct 1546
>emb|AL133305.3|CNS01DUO Human chromosome 14 DNA sequence BAC R-66M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159524 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 agtaatcaccaggaagattg 300 |||||||||||||||||||| Sbjct: 92102 agtaatcaccaggaagattg 92121
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aaaaacagagcagagcttccaaag 61 |||| ||||||||||||||||||| Sbjct: 14429 aaaaccagagcagagcttccaaag 14406
>gb|AY231582.1| Hepatitis C virus isolate NB74 polyprotein gene, partial cds Length = 1805 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1448 caccacggctgggcttgttggtct 1471
>gb|M67463.1|HPCCGAA Hepatitis C virus, complete genome Length = 9416 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 caccacggctgggcttgtcggtct 172 |||||||||||||||||| ||||| Sbjct: 1523 caccacggctgggcttgttggtct 1546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,271,174 Number of Sequences: 3902068 Number of extensions: 3271174 Number of successful extensions: 94425 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93921 Number of HSP's gapped (non-prelim): 498 length of query: 396 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 374 effective length of database: 17,147,199,772 effective search space: 6413052714728 effective search space used: 6413052714728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
